Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0700960 | XP_003629733.2 | 96.509 | 1117 | 0 | 4 | 1 | 1078 | 1 | 1117 | 0.0 | 2186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0700960 | sp|Q8BKC5|IPO5_MOUSE | 36.847 | 1072 | 615 | 16 | 43 | 1078 | 51 | 1096 | 0.0 | 687 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0700960 | A0A396GNB0 | 96.509 | 1117 | 0 | 4 | 1 | 1078 | 1 | 1117 | 0.0 | 2186 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0617930 | Msa0700960 | 0.862787 | 3.956258e-64 | -8.615850e-47 |
Msa0657010 | Msa0700960 | 0.927317 | 1.391359e-91 | -8.615850e-47 |
Msa0700960 | Msa1045280 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
Msa0700960 | Msa1140410 | 0.823289 | 1.500412e-53 | -8.615850e-47 |
Msa0700960 | Msa1429580 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
Msa0387140 | Msa0700960 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
Msa0428210 | Msa0700960 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0700960 | MtrunA17_Chr8g0378791 | 96.509 | 1117 | 0 | 4 | 1 | 1078 | 1 | 1117 | 0.0 | 2186 |
Msa0700960 | MtrunA17_Chr7g0253431 | 77.179 | 1113 | 210 | 7 | 9 | 1078 | 7 | 1118 | 0.0 | 1708 |
Msa0700960 | MtrunA17_Chr2g0277681 | 26.230 | 1098 | 688 | 34 | 17 | 1075 | 30 | 1044 | 1.02e-88 | 308 |
Msa0700960 | MtrunA17_Chr3g0110011 | 45.106 | 235 | 127 | 1 | 844 | 1078 | 110 | 342 | 3.51e-62 | 215 |
Msa0700960 | MtrunA17_Chr3g0110081 | 25.564 | 798 | 470 | 25 | 81 | 834 | 167 | 884 | 2.46e-44 | 174 |
Msa0700960 | MtrunA17_Chr3g0110021 | 29.348 | 368 | 225 | 12 | 41 | 377 | 73 | 436 | 4.07e-30 | 125 |
Msa0700960 | MtrunA17_Chr3g0110051 | 22.379 | 782 | 514 | 24 | 41 | 799 | 109 | 820 | 1.30e-29 | 127 |
Msa0700960 | MtrunA17_Chr3g0110041 | 24.643 | 560 | 362 | 20 | 41 | 549 | 120 | 670 | 5.22e-26 | 115 |
Msa0700960 | MtrunA17_Chr3g0110061 | 24.153 | 472 | 332 | 12 | 101 | 546 | 131 | 602 | 1.37e-25 | 113 |
Msa0700960 | MtrunA17_Chr8g0388701 | 32.335 | 167 | 95 | 3 | 882 | 1047 | 12 | 161 | 8.33e-21 | 91.3 |
Msa0700960 | MtrunA17_Chr3g0110071 | 36.792 | 106 | 62 | 3 | 881 | 986 | 6 | 106 | 2.30e-12 | 64.7 |
Msa0700960 | MtrunA17_Chr8g0388661 | 21.046 | 803 | 510 | 34 | 49 | 774 | 54 | 809 | 2.25e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0700960 | AT5G19820.1 | 79.051 | 1117 | 194 | 5 | 1 | 1078 | 1 | 1116 | 0.0 | 1796 |
Msa0700960 | AT4G27640.1 | 25.023 | 1071 | 707 | 30 | 17 | 1055 | 30 | 1036 | 9.13e-81 | 286 |
Msa0700960 | AT2G16950.2 | 22.613 | 597 | 356 | 23 | 49 | 573 | 67 | 629 | 2.63e-11 | 68.6 |
Find 281 sgRNAs with CRISPR-Local
Find 684 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAAATACCGCTACTATTT+TGG | 0.031192 | 4_4:-72162021 | None:intergenic |
CAATTGTCCAATTGCATTAA+TGG | 0.133282 | 4_4:-72154318 | None:intergenic |
GGTTAATTCTGATGTTTATT+TGG | 0.176263 | 4_4:+72163512 | Msa0700960:three_prime_UTR |
CCTCGTGGAAATAAAATTTA+AGG | 0.186312 | 4_4:-72158422 | None:intergenic |
TCATATGCCATTACATTATC+TGG | 0.189146 | 4_4:-72161549 | None:intergenic |
CTCGGTGTTTGTGCTGAGTT+TGG | 0.199189 | 4_4:+72161373 | Msa0700960:CDS |
TGAACAATTACCTGCGTATT+TGG | 0.203462 | 4_4:+72154021 | Msa0700960:CDS |
CTCAATCAAATCACCTTTAA+TGG | 0.208670 | 4_4:-72161842 | None:intergenic |
TGGACAATTGTCTACTGATT+TGG | 0.219251 | 4_4:+72154331 | Msa0700960:CDS |
TGACAGCATCATAATATTTC+TGG | 0.220680 | 4_4:-72156797 | None:intergenic |
TCTGATGTTTATTTGGATAT+TGG | 0.227132 | 4_4:+72163519 | Msa0700960:three_prime_UTR |
CTGTCGGAAAGGAGAAATTT+AGG | 0.230051 | 4_4:+72156916 | Msa0700960:CDS |
CGCCGATAGAGATAGGTTTC+AGG | 0.232336 | 4_4:+72153541 | Msa0700960:CDS |
GTTAGAAAAGCTGCCGTTTC+AGG | 0.232754 | 4_4:+72158447 | Msa0700960:CDS |
TTGGGAAGGTATTGATTGTT+TGG | 0.242619 | 4_4:-72162002 | None:intergenic |
CAAATTGCTTGTACTTCTTC+AGG | 0.252482 | 4_4:+72156503 | Msa0700960:CDS |
GGCTAGACTCTGCAAGTGTC+TGG | 0.264832 | 4_4:+72157712 | Msa0700960:CDS |
CTATCAGGTGGGCGAGATAT+TGG | 0.266277 | 4_4:+72160166 | Msa0700960:intron |
TGGGGCAATTCGTGCAGTTT+TGG | 0.279857 | 4_4:+72163282 | Msa0700960:three_prime_UTR |
ACAGATCTCCGGGATGCTTT+TGG | 0.283742 | 4_4:+72159869 | Msa0700960:intron |
CAATACTGTCCTGGTGAAAT+TGG | 0.284416 | 4_4:-72161602 | None:intergenic |
TGTGACTTCCGTAGTGTATA+TGG | 0.293337 | 4_4:+72163480 | Msa0700960:three_prime_UTR |
TTGACGGAGGCGTTGAATTC+AGG | 0.293964 | 4_4:+72153590 | Msa0700960:CDS |
GGATAGGTTATCGATATCTT+TGG | 0.294948 | 4_4:+72153970 | Msa0700960:intron |
TCGGTGTTTGTGCTGAGTTT+GGG | 0.303824 | 4_4:+72161374 | Msa0700960:CDS |
TTCAGTAAATGAATGCTTAC+AGG | 0.307262 | 4_4:+72159067 | Msa0700960:CDS |
CTAACTATTCCATCCAAGTA+TGG | 0.308374 | 4_4:-72156480 | None:intergenic |
AACATAAACGGAAGCAATTC+AGG | 0.309427 | 4_4:-72153305 | None:intergenic |
CCATCATTCATTCTTGCATA+TGG | 0.310310 | 4_4:+72163076 | Msa0700960:three_prime_UTR |
TATTCTGATGAAGATGCTTT+TGG | 0.313367 | 4_4:+72153856 | Msa0700960:CDS |
AAGTATGGCGTTAAAATTTC+AGG | 0.313954 | 4_4:-72156465 | None:intergenic |
TCACCTGTACGCGGGGATTC+TGG | 0.316888 | 4_4:-72154421 | None:intergenic |
GGACAATTGTCTACTGATTT+GGG | 0.318866 | 4_4:+72154332 | Msa0700960:CDS |
ACAACTGTCTAACCTCCTTT+TGG | 0.319452 | 4_4:-72163184 | None:intergenic |
ATTGCGATCCTTCTCTCTTC+AGG | 0.323866 | 4_4:-72161026 | None:intergenic |
GCTCAATTGTCGCAGTATAT+TGG | 0.327463 | 4_4:+72153383 | Msa0700960:CDS |
CATCGTTTCTCCATAGCATC+TGG | 0.329357 | 4_4:+72162956 | Msa0700960:three_prime_UTR |
CATGCTTCGTGCTAAGTCTA+TGG | 0.334668 | 4_4:+72156869 | Msa0700960:CDS |
TCACGATCAACTTTGTTCTA+TGG | 0.339301 | 4_4:+72161876 | Msa0700960:CDS |
GCCGTATTGCGTGAGAAAAT+AGG | 0.339501 | 4_4:+72163251 | Msa0700960:three_prime_UTR |
CCGTATTGCGTGAGAAAATA+GGG | 0.343861 | 4_4:+72163252 | Msa0700960:three_prime_UTR |
TTGAACTGTCTGCCCATTAA+AGG | 0.352539 | 4_4:+72161829 | Msa0700960:CDS |
GGCATGACAAATTCCATATA+AGG | 0.363015 | 4_4:-72157749 | None:intergenic |
TGGGAAGGTATTGATTGTTT+GGG | 0.363550 | 4_4:-72162001 | None:intergenic |
ATATAGACAATGATTATAAA+AGG | 0.366680 | 4_4:-72163630 | None:intergenic |
GATAGGTTATCGATATCTTT+GGG | 0.368820 | 4_4:+72153971 | Msa0700960:intron |
GAATGATGGAAACCATCTTA+TGG | 0.370067 | 4_4:-72163062 | None:intergenic |
GCTGCATTTGCAGGTAGTTC+CGG | 0.371697 | 4_4:+72161801 | Msa0700960:intron |
TACGTATCTTCCATTCTTGT+TGG | 0.374595 | 4_4:+72161200 | Msa0700960:CDS |
TCTGTGTTCAAACCTCTTGT+TGG | 0.375892 | 4_4:+72161400 | Msa0700960:CDS |
TGCAATGCTTCCACCAAAGC+TGG | 0.377656 | 4_4:-72158683 | None:intergenic |
TATCAGGTGGGCGAGATATT+GGG | 0.378338 | 4_4:+72160167 | Msa0700960:intron |
TGGAATCAAGACTAGTGTTC+TGG | 0.380110 | 4_4:+72158193 | Msa0700960:CDS |
AGAGGGAGCCTTGACTGCTT+TGG | 0.381283 | 4_4:+72156663 | Msa0700960:CDS |
GTCTATGGAATGCATAAGTT+TGG | 0.383864 | 4_4:+72156884 | Msa0700960:CDS |
TTTCTGCAGGCAGCGGTATA+CGG | 0.384330 | 4_4:+72161349 | Msa0700960:intron |
TAGGTTTCAGGATTTGTTAC+CGG | 0.385158 | 4_4:+72153553 | Msa0700960:CDS |
TCCCAACTCGCGGCGATTCT+CGG | 0.388817 | 4_4:+72152912 | Msa0700960:CDS |
TGCGGAGGCCGAGTCTTTAG+AGG | 0.392146 | 4_4:+72153724 | Msa0700960:CDS |
ACTCTCGGTGACAAAAGAAT+TGG | 0.392745 | 4_4:+72158173 | Msa0700960:CDS |
CTTGCACAAATTTCTGTGTC+AGG | 0.397759 | 4_4:-72159035 | None:intergenic |
AGAGGAAGGGACTAGGCATT+TGG | 0.398444 | 4_4:+72153742 | Msa0700960:CDS |
ACTACGGAAGTCACAGATTC+AGG | 0.401117 | 4_4:-72163472 | None:intergenic |
TTATCTGGATGAAGCGCATT+AGG | 0.403617 | 4_4:-72161534 | None:intergenic |
AGGTCCGACAGCTCTCTCTT+AGG | 0.406373 | 4_4:+72161978 | Msa0700960:intron |
CGCCGAGAATCGCCGCGAGT+TGG | 0.410430 | 4_4:-72152914 | None:intergenic |
CATTGACCAATATAGCCTTC+AGG | 0.412023 | 4_4:-72156827 | None:intergenic |
TGATATTGAACTTGCAAATC+CGG | 0.412982 | 4_4:-72154356 | None:intergenic |
CAGCTGTTTGTTCTGTTGCA+AGG | 0.416156 | 4_4:-72162786 | None:intergenic |
ATCGACGACAAATTATTACT+TGG | 0.416372 | 4_4:-72163427 | None:intergenic |
TAGCAGGCGGTAATGTTTGC+TGG | 0.418065 | 4_4:-72162837 | None:intergenic |
GCCGAGAATCGCCGCGAGTT+GGG | 0.420121 | 4_4:-72152913 | None:intergenic |
AAATATAGAGACCACCAAAC+TGG | 0.420439 | 4_4:-72163022 | None:intergenic |
TGGGCAGCCATTAATGCAAT+TGG | 0.420671 | 4_4:+72154311 | Msa0700960:CDS |
CTATGTCCGCTATTCTTCTT+CGG | 0.421823 | 4_4:+72153105 | Msa0700960:CDS |
AATAGTTGAAGAGGTAAAAC+AGG | 0.425292 | 4_4:+72159911 | Msa0700960:CDS |
AGCATCAAAATCTTCAGCTT+GGG | 0.426942 | 4_4:-72159979 | None:intergenic |
TGACAATGCAGTTTCTGCTC+TGG | 0.428092 | 4_4:+72161569 | Msa0700960:CDS |
AGATGCCGCAGTTTATTAGT+AGG | 0.433330 | 4_4:+72153825 | Msa0700960:CDS |
AATTCAGGCCAACCGTTATC+CGG | 0.434247 | 4_4:-72153290 | None:intergenic |
TCAATCAAATCACCTTTAAT+GGG | 0.436293 | 4_4:-72161841 | None:intergenic |
ACCGTACCTGAAGGCTATAT+TGG | 0.437750 | 4_4:+72156821 | Msa0700960:CDS |
ATGTGTATATTGAGTGTTCA+TGG | 0.438075 | 4_4:+72163150 | Msa0700960:three_prime_UTR |
CTGGTTCCGCCGATAGAGAT+AGG | 0.441094 | 4_4:+72153534 | Msa0700960:CDS |
CGCGTGATGATTCATTCCTC+TGG | 0.442926 | 4_4:+72153138 | Msa0700960:CDS |
ATTCTTTCCATGGATTGATC+AGG | 0.444124 | 4_4:+72158274 | Msa0700960:CDS |
GCCAGCCCTAGCTGCTGCCA+TGG | 0.444572 | 4_4:+72154391 | Msa0700960:CDS |
AGGCAAGAAGGATGCTTTGA+AGG | 0.444588 | 4_4:-72160204 | None:intergenic |
AAAGCAGCAATTCTGACATC+AGG | 0.445785 | 4_4:-72153479 | None:intergenic |
TGTCGGAAAGGAGAAATTTA+GGG | 0.446376 | 4_4:+72156917 | Msa0700960:CDS |
GTGTTCAAACCTCTTGTTGG+AGG | 0.452256 | 4_4:+72161403 | Msa0700960:CDS |
TCAGTGCGTTTCGTCTGATT+CGG | 0.452441 | 4_4:+72153328 | Msa0700960:CDS |
CATCTTATTTGACTCCTATG+TGG | 0.455513 | 4_4:+72160243 | Msa0700960:CDS |
GATGCAGGTTGCAGGAACTT+TGG | 0.456597 | 4_4:+72158392 | Msa0700960:intron |
CAGCATCAAAATCTTCAGCT+TGG | 0.459418 | 4_4:-72159980 | None:intergenic |
GGCTTGAGAACGTTCTTCGT+TGG | 0.461472 | 4_4:-72152985 | None:intergenic |
TCGAGTATATTGCCGGATAA+CGG | 0.462401 | 4_4:+72153278 | Msa0700960:CDS |
CAGGTGGAAGCAAGGGTAGC+AGG | 0.463259 | 4_4:-72162853 | None:intergenic |
TTGAGATTGCCCTTTCTCAA+TGG | 0.464568 | 4_4:-72158615 | None:intergenic |
ATTTAGGGCTGATGCTAAGC+AGG | 0.466706 | 4_4:+72156932 | Msa0700960:CDS |
TGACAGTATCATCCCAGCTT+TGG | 0.467023 | 4_4:+72158670 | Msa0700960:CDS |
CTGCTACCCTTGCTTCCACC+TGG | 0.467347 | 4_4:+72162854 | Msa0700960:CDS |
ATTGTCTACTGATTTGGGTC+CGG | 0.467478 | 4_4:+72154337 | Msa0700960:CDS |
GAGTTGCTTATTGAGCTTGC+GGG | 0.467677 | 4_4:+72153641 | Msa0700960:CDS |
GTATCTTCCATTCTTGTTGG+AGG | 0.470358 | 4_4:+72161203 | Msa0700960:CDS |
ATGCTAACCTGTCTAACATC+TGG | 0.474453 | 4_4:-72161243 | None:intergenic |
TGAAAGAAGGATTCTTTCCA+TGG | 0.475708 | 4_4:+72158264 | Msa0700960:CDS |
TGTAGCATGTAACTTGTTGT+TGG | 0.478385 | 4_4:-72157598 | None:intergenic |
GATGACAATTCTTCAAAGAA+AGG | 0.480654 | 4_4:-72160224 | None:intergenic |
AGAAATTTGTGCAAGTATGT+TGG | 0.481433 | 4_4:+72159043 | Msa0700960:CDS |
TGATTACTCTTGCTGAAGCT+AGG | 0.483939 | 4_4:+72153777 | Msa0700960:CDS |
ATCTTATTTGACTCCTATGT+GGG | 0.485888 | 4_4:+72160244 | Msa0700960:CDS |
GAAGCTAGGGAGCGTGCTCC+TGG | 0.485994 | 4_4:+72153791 | Msa0700960:CDS |
GCAAAGTTAGCCATTGAGAA+AGG | 0.486249 | 4_4:+72158605 | Msa0700960:CDS |
CTGATCAACATCCTCGTGTA+AGG | 0.486407 | 4_4:+72154288 | Msa0700960:CDS |
GTCCTTGCAAGGATCACAAA+TGG | 0.486615 | 4_4:+72157564 | Msa0700960:CDS |
TTCAAAATCTGATATCAGAA+AGG | 0.487538 | 4_4:-72163348 | None:intergenic |
ACTCGCTTCGAGTATATTGC+CGG | 0.487730 | 4_4:+72153271 | Msa0700960:CDS |
CAATATCTCTATAGCAATGC+CGG | 0.488186 | 4_4:+72158568 | Msa0700960:intron |
TTGTTGTAGCTGAGTTGACT+CGG | 0.488846 | 4_4:-72152889 | None:intergenic |
TTTGAGAGAAGCTTGAGTGT+TGG | 0.490223 | 4_4:-72153174 | None:intergenic |
GACTACCTTTGAGCTTCCCT+CGG | 0.492890 | 4_4:-72154098 | None:intergenic |
CAGGCAGCGGTATACGGCCT+CGG | 0.494617 | 4_4:+72161355 | Msa0700960:intron |
TCAAAATCTGATATCAGAAA+GGG | 0.495216 | 4_4:-72163347 | None:intergenic |
GAATCCTTCTTTCAACTCAT+CGG | 0.496573 | 4_4:-72158255 | None:intergenic |
TTGCAAGTTCAATATCATCA+AGG | 0.497804 | 4_4:+72154362 | Msa0700960:CDS |
TTTAGAGCAAGTGGTGGCTA+TGG | 0.499528 | 4_4:+72154250 | Msa0700960:CDS |
TTACATGCCTCCAACAAGAA+TGG | 0.499838 | 4_4:-72161210 | None:intergenic |
GTCTGAGTAAACTAACCATT+CGG | 0.499941 | 4_4:-72162810 | None:intergenic |
ATCAGTTGCTGATTCATCTC+AGG | 0.501257 | 4_4:+72156687 | Msa0700960:CDS |
ATCATCCATGGCAGCAGCTA+GGG | 0.501960 | 4_4:-72154396 | None:intergenic |
ATTTCAGAATGGTAAACAAA+TGG | 0.503330 | 4_4:+72156636 | Msa0700960:intron |
CAGTATCATCCCAGCTTTGG+TGG | 0.504748 | 4_4:+72158673 | Msa0700960:CDS |
ATGGAATGCATAAGTTTGGT+TGG | 0.505162 | 4_4:+72156888 | Msa0700960:CDS |
TCCATGGCAGCAGCTAGGGC+TGG | 0.505867 | 4_4:-72154392 | None:intergenic |
TTTGGTGGAAGCATTGCATA+AGG | 0.506410 | 4_4:+72158688 | Msa0700960:CDS |
GTCAACGTCGTCATCATAGC+CGG | 0.507512 | 4_4:-72153572 | None:intergenic |
ACTATGCAAACTATGAAGAA+AGG | 0.510590 | 4_4:-72162918 | None:intergenic |
GCTAGACTCTGCAAGTGTCT+GGG | 0.510865 | 4_4:+72157713 | Msa0700960:CDS |
GACAATGCAGTTTCTGCTCT+GGG | 0.511023 | 4_4:+72161570 | Msa0700960:CDS |
AACTGCCAACCCAGATGCTA+TGG | 0.512225 | 4_4:-72162966 | None:intergenic |
CGGTGTTTGTGCTGAGTTTG+GGG | 0.513048 | 4_4:+72161375 | Msa0700960:CDS |
CATTAAAGGTGATTTGATTG+AGG | 0.514731 | 4_4:+72161843 | Msa0700960:CDS |
GATGAAGCGCATTAGGATGT+TGG | 0.515875 | 4_4:-72161527 | None:intergenic |
ATAGCATCTGGGTTGGCAGT+TGG | 0.517021 | 4_4:+72162968 | Msa0700960:three_prime_UTR |
TATGCCGATGAGTTGAAAGA+AGG | 0.518825 | 4_4:+72158251 | Msa0700960:CDS |
AACAACAAGTTACATGCTAC+AGG | 0.519395 | 4_4:+72157600 | Msa0700960:CDS |
GGTAATTGTTCAGAAGCAAC+AGG | 0.520537 | 4_4:-72154010 | None:intergenic |
ACCTGCGTATTTGGCTGCAC+CGG | 0.521180 | 4_4:+72154030 | Msa0700960:CDS |
CTTACACGAGGATGTTGATC+AGG | 0.522287 | 4_4:-72154287 | None:intergenic |
GAAAGGGCAATCTCAAGGTC+GGG | 0.523223 | 4_4:+72158622 | Msa0700960:CDS |
GAAACGCACTGAAACATAAA+CGG | 0.523550 | 4_4:-72153317 | None:intergenic |
AGTCTTTAGAGGAAGGGACT+AGG | 0.523834 | 4_4:+72153735 | Msa0700960:CDS |
GATCATTCTCATACCTGAAA+CGG | 0.524594 | 4_4:-72158460 | None:intergenic |
TTTCCAGAATCCCCGCGTAC+AGG | 0.525098 | 4_4:+72154418 | Msa0700960:CDS |
ATCGTTTCTCCATAGCATCT+GGG | 0.527571 | 4_4:+72162957 | Msa0700960:three_prime_UTR |
TTGAGAACGTTCTTCGTTGG+TGG | 0.527614 | 4_4:-72152982 | None:intergenic |
CTCCATTTGTGATCCTTGCA+AGG | 0.529100 | 4_4:-72157566 | None:intergenic |
ATCAGAGTCTCAAACGGTGA+TGG | 0.529863 | 4_4:-72152942 | None:intergenic |
CACAGATTCAGGAATATAAG+TGG | 0.531202 | 4_4:-72163461 | None:intergenic |
GAGAAAATAGGGTTGTCTGT+GGG | 0.532075 | 4_4:+72163263 | Msa0700960:three_prime_UTR |
TAGCAACTATAGTGTTGGAC+AGG | 0.533245 | 4_4:+72153940 | Msa0700960:CDS |
AATCATCCATGGCAGCAGCT+AGG | 0.533390 | 4_4:-72154397 | None:intergenic |
AGCTTGCGGGGACTGAGCCT+AGG | 0.534258 | 4_4:+72153654 | Msa0700960:CDS |
AACTGATGCCAAAGCAGTCA+AGG | 0.535384 | 4_4:-72156671 | None:intergenic |
CCATATGCAAGAATGAATGA+TGG | 0.541120 | 4_4:-72163076 | None:intergenic |
TGCAAGTTCAATATCATCAA+GGG | 0.542378 | 4_4:+72154363 | Msa0700960:CDS |
CAAAGTTAGCCATTGAGAAA+GGG | 0.544023 | 4_4:+72158606 | Msa0700960:CDS |
GGCTATGATGACGACGTTGA+CGG | 0.545297 | 4_4:+72153574 | Msa0700960:CDS |
TCAAGAGGCGACTGCTCAAG+AGG | 0.545783 | 4_4:+72153613 | Msa0700960:CDS |
GGGCAGAGTCAATACTGTCC+TGG | 0.546727 | 4_4:-72161611 | None:intergenic |
GATTACTCTTGCTGAAGCTA+GGG | 0.546767 | 4_4:+72153778 | Msa0700960:CDS |
GATAGCCGAGGGAAGCTCAA+AGG | 0.547363 | 4_4:+72154093 | Msa0700960:CDS |
GGTCAAGTCAATAGTTGAAG+AGG | 0.548828 | 4_4:+72159902 | Msa0700960:CDS |
GGCAGACAGTTCAACCATGC+CGG | 0.549952 | 4_4:-72161820 | None:intergenic |
TGAAACTCCAGATGTTAGAC+AGG | 0.551089 | 4_4:+72161236 | Msa0700960:CDS |
TGCAAACTATGAAGAAAGGA+TGG | 0.552426 | 4_4:-72162914 | None:intergenic |
ATCAACATCCTCGTGTAAGG+TGG | 0.552996 | 4_4:+72154291 | Msa0700960:CDS |
TGGAAATAAAATTTAAGGAG+TGG | 0.553423 | 4_4:-72158417 | None:intergenic |
GTATCCGCAGTGTGCCATGC+GGG | 0.556387 | 4_4:-72153893 | None:intergenic |
TTTGCAGATCGTAATAGCTC+CGG | 0.557132 | 4_4:-72158587 | None:intergenic |
AGTCTCAAACGGTGATGGAT+CGG | 0.558898 | 4_4:-72152937 | None:intergenic |
ATGCATAAGTTTGGTTGGAA+TGG | 0.560001 | 4_4:+72156893 | Msa0700960:CDS |
CGATCAACTTTGTTCTATGG+CGG | 0.561251 | 4_4:+72161879 | Msa0700960:CDS |
GGCATCTTCCTCATCATACC+AGG | 0.561763 | 4_4:-72153809 | None:intergenic |
ATGGTGCGATTGAGTCCAAA+AGG | 0.562737 | 4_4:+72163169 | Msa0700960:three_prime_UTR |
GAATCTAGCAACTATAGTGT+TGG | 0.562795 | 4_4:+72153935 | Msa0700960:CDS |
AAGATGACCAGGTGGAAGCA+AGG | 0.562842 | 4_4:-72162861 | None:intergenic |
AGAAAGGGCAATCTCAAGGT+CGG | 0.564082 | 4_4:+72158621 | Msa0700960:CDS |
GAAGTTCTTATGTCCTTGCA+AGG | 0.564320 | 4_4:+72157553 | Msa0700960:CDS |
GCAGATGTGATGGTAACGTC+AGG | 0.566720 | 4_4:-72157800 | None:intergenic |
GGTTGGAATGGCTGTCGGAA+AGG | 0.567317 | 4_4:+72156905 | Msa0700960:CDS |
TATTTGGATATTGGCCGAGT+AGG | 0.567939 | 4_4:+72163528 | Msa0700960:three_prime_UTR |
AGGTTAGACAGTTGTTGCAT+CGG | 0.569103 | 4_4:+72163192 | Msa0700960:three_prime_UTR |
TTCTTCAAAGAAAGGCAAGA+AGG | 0.569138 | 4_4:-72160216 | None:intergenic |
TAGATGATTCTGATGATGAA+AGG | 0.572299 | 4_4:+72157840 | Msa0700960:CDS |
TGAGTTGCTTATTGAGCTTG+CGG | 0.572615 | 4_4:+72153640 | Msa0700960:CDS |
ATTTGCAGGTAGTTCCGGCA+TGG | 0.573214 | 4_4:+72161806 | Msa0700960:intron |
AGTCTAACCTGATCAATCCA+TGG | 0.574932 | 4_4:-72158281 | None:intergenic |
ATCCTGAAACCTATCTCTAT+CGG | 0.577427 | 4_4:-72153543 | None:intergenic |
GGCGTTGAATTCAGGTCAAG+AGG | 0.578897 | 4_4:+72153598 | Msa0700960:CDS |
AGATGACCAGGTGGAAGCAA+GGG | 0.581291 | 4_4:-72162860 | None:intergenic |
GATTAAAGAGGAAAACGAGC+AGG | 0.581297 | 4_4:+72160016 | Msa0700960:CDS |
AGTTTGGTTGGAATGGCTGT+CGG | 0.582073 | 4_4:+72156900 | Msa0700960:CDS |
AGGAAAGCTCACCTGTACGC+GGG | 0.582531 | 4_4:-72154429 | None:intergenic |
ACCAATATAGCCTTCAGGTA+CGG | 0.584658 | 4_4:-72156822 | None:intergenic |
TGGTAAACAAATGGTGCAAG+AGG | 0.585953 | 4_4:+72156645 | Msa0700960:CDS |
ACGAGGATGTTGATCAGGAA+AGG | 0.589437 | 4_4:-72154282 | None:intergenic |
GCAATGCTTCCACCAAAGCT+GGG | 0.591321 | 4_4:-72158682 | None:intergenic |
CTAGACTCTGCAAGTGTCTG+GGG | 0.591446 | 4_4:+72157714 | Msa0700960:CDS |
TTTCTCCATAGCATCTGGGT+TGG | 0.592670 | 4_4:+72162961 | Msa0700960:three_prime_UTR |
AGAAAATAGGGTTGTCTGTG+GGG | 0.596860 | 4_4:+72163264 | Msa0700960:three_prime_UTR |
GCTTCATCCAGATAATGTAA+TGG | 0.597429 | 4_4:+72161542 | Msa0700960:CDS |
TTGCGGCTGCAAAGATGACC+AGG | 0.597788 | 4_4:-72162872 | None:intergenic |
ATTGAGAAAGGGCAATCTCA+AGG | 0.599282 | 4_4:+72158617 | Msa0700960:CDS |
ACAAGACTCCTGAAGAGAGA+AGG | 0.600764 | 4_4:+72161018 | Msa0700960:CDS |
TGTTGTAGCTGAGTTGACTC+GGG | 0.600878 | 4_4:-72152888 | None:intergenic |
GAGGCCGAGTCTTTAGAGGA+AGG | 0.600961 | 4_4:+72153728 | Msa0700960:CDS |
TGTGAGATCAGAGTCTCAAA+CGG | 0.602992 | 4_4:-72152948 | None:intergenic |
GTATATTGCCGGATAACGGT+TGG | 0.605698 | 4_4:+72153282 | Msa0700960:CDS |
AGTCCCTTCCTCTAAAGACT+CGG | 0.605757 | 4_4:-72153732 | None:intergenic |
CTTGCAACAGAACAAACAGC+TGG | 0.607654 | 4_4:+72162787 | Msa0700960:CDS |
GAAGCAGACTGAAGCAATGG+TGG | 0.608511 | 4_4:-72157770 | None:intergenic |
AACTTTGTTCTATGGCGGAG+AGG | 0.608912 | 4_4:+72161884 | Msa0700960:CDS |
GGGATTCTGGAAATCATCCA+TGG | 0.611070 | 4_4:-72154408 | None:intergenic |
AGGCCGAGTCTTTAGAGGAA+GGG | 0.611185 | 4_4:+72153729 | Msa0700960:CDS |
GGACAGTATTGACTCTGCCC+AGG | 0.611934 | 4_4:+72161614 | Msa0700960:CDS |
CGTATTTGGCTGCACCGGAG+TGG | 0.613438 | 4_4:+72154035 | Msa0700960:CDS |
AGTATGGAAACTATCACTCT+CGG | 0.613971 | 4_4:+72158158 | Msa0700960:intron |
TAAGCAGTACCTCCAACAAG+AGG | 0.616877 | 4_4:-72161412 | None:intergenic |
AGAACAAACAGCTGGCCGAA+TGG | 0.617898 | 4_4:+72162795 | Msa0700960:CDS |
GATACTGAAGATGAGGATGC+TGG | 0.618679 | 4_4:+72153911 | Msa0700960:CDS |
GCAAACTTGATAAATAGCAT+CGG | 0.619098 | 4_4:-72163389 | None:intergenic |
GTCTGAATCAGCAGATGTGA+TGG | 0.620767 | 4_4:-72157810 | None:intergenic |
AGTGAAGCAGACTGAAGCAA+TGG | 0.623414 | 4_4:-72157773 | None:intergenic |
CACTGCGGATACTGAAGATG+AGG | 0.623501 | 4_4:+72153904 | Msa0700960:CDS |
TGGGCCTAAGAGAGAGCTGT+CGG | 0.625244 | 4_4:-72161982 | None:intergenic |
TAGTGTATATGGATCGTGCT+CGG | 0.625715 | 4_4:+72163491 | Msa0700960:three_prime_UTR |
TCAACATCCTCGTGTAAGGT+GGG | 0.625966 | 4_4:+72154292 | Msa0700960:CDS |
AATAGTAGCGGTATTTGCAG+AGG | 0.628250 | 4_4:+72162025 | Msa0700960:CDS |
CTGAAACCTATCTCTATCGG+CGG | 0.629890 | 4_4:-72153540 | None:intergenic |
AATCAAGACTAGTGTTCTGG+AGG | 0.630386 | 4_4:+72158196 | Msa0700960:CDS |
CAAGCGCAATCAATGCAGCA+TGG | 0.631444 | 4_4:-72154066 | None:intergenic |
TGCAATGCTTCAGATTGCGG+AGG | 0.631976 | 4_4:+72153709 | Msa0700960:intron |
TGCGCTTGCTCAGATAGCCG+AGG | 0.633942 | 4_4:+72154081 | Msa0700960:CDS |
TCCGGTGCAGCCAAATACGC+AGG | 0.640135 | 4_4:-72154031 | None:intergenic |
TGCTGTCATACCGTACCTGA+AGG | 0.640419 | 4_4:+72156812 | Msa0700960:CDS |
TAAAGAGGAAAACGAGCAGG+AGG | 0.642022 | 4_4:+72160019 | Msa0700960:CDS |
GCAAGTTCAATATCATCAAG+GGG | 0.642471 | 4_4:+72154364 | Msa0700960:CDS |
GCGCTTGCTCAGATAGCCGA+GGG | 0.646139 | 4_4:+72154082 | Msa0700960:CDS |
CTGGACGAACATACCCACAT+AGG | 0.647072 | 4_4:-72160257 | None:intergenic |
AGCGTGCTCCTGGTATGATG+AGG | 0.647250 | 4_4:+72153801 | Msa0700960:CDS |
ATAGCACGAGCTTCTTGATG+AGG | 0.650205 | 4_4:-72153086 | None:intergenic |
TGAGAAAATAGGGTTGTCTG+TGG | 0.650322 | 4_4:+72163262 | Msa0700960:three_prime_UTR |
AGCACGATCCATATACACTA+CGG | 0.651458 | 4_4:-72163488 | None:intergenic |
AGTTGCTTATTGAGCTTGCG+GGG | 0.652193 | 4_4:+72153642 | Msa0700960:CDS |
TCATGAAGGTGTTTGATATG+CGG | 0.655511 | 4_4:-72153419 | None:intergenic |
GGAAAGCTCACCTGTACGCG+GGG | 0.656730 | 4_4:-72154428 | None:intergenic |
AAGGAAAGCTCACCTGTACG+CGG | 0.657388 | 4_4:-72154430 | None:intergenic |
TAGACTTAGCACGAAGCATG+CGG | 0.663457 | 4_4:-72156866 | None:intergenic |
GGTAAACAAATGGTGCAAGA+GGG | 0.663711 | 4_4:+72156646 | Msa0700960:CDS |
GTTGCAGAGCAGTGTCGTGA+AGG | 0.667612 | 4_4:+72161065 | Msa0700960:CDS |
AGTATCCGCAGTGTGCCATG+CGG | 0.668390 | 4_4:-72153894 | None:intergenic |
AGGTTATCGATATCTTTGGG+AGG | 0.678521 | 4_4:+72153974 | Msa0700960:intron |
ATACCTTCCCAAAATAGTAG+CGG | 0.684508 | 4_4:+72162013 | Msa0700960:CDS |
GGTGTTTGTGCTGAGTTTGG+GGG | 0.689686 | 4_4:+72161376 | Msa0700960:CDS |
TGTAAAGCAAGCTGTTGTTG+CGG | 0.689701 | 4_4:-72162889 | None:intergenic |
TATGATGACGACGTTGACGG+AGG | 0.691858 | 4_4:+72153577 | Msa0700960:CDS |
TGGACGAAAGACGAGGCCAG+AGG | 0.697746 | 4_4:-72153154 | None:intergenic |
CAAACTCAGCACAAACACCG+AGG | 0.699327 | 4_4:-72161372 | None:intergenic |
ATATTGAGGATGATCCCGCA+TGG | 0.701405 | 4_4:+72153879 | Msa0700960:CDS |
TTGCTTCCGAAGAAGAATAG+CGG | 0.703185 | 4_4:-72153111 | None:intergenic |
AACAACCTACTAATAAACTG+CGG | 0.712474 | 4_4:-72153830 | None:intergenic |
GTGGAAGCAAGGGTAGCAGG+CGG | 0.721019 | 4_4:-72162850 | None:intergenic |
CGGCTGCAAAGATGACCAGG+TGG | 0.721639 | 4_4:-72162869 | None:intergenic |
CTTATGCAGAGGCTCTATCG+AGG | 0.722154 | 4_4:+72161490 | Msa0700960:intron |
GTGCGATTGAGTCCAAAAGG+AGG | 0.724830 | 4_4:+72163172 | Msa0700960:three_prime_UTR |
ATGGCTGCCCACCTTACACG+AGG | 0.728704 | 4_4:-72154299 | None:intergenic |
TGATCCCGCATGGCACACTG+CGG | 0.748655 | 4_4:+72153889 | Msa0700960:CDS |
TGAGTGTTGGACGAAAGACG+AGG | 0.753231 | 4_4:-72153161 | None:intergenic |
GCTACAACAATCCCAACTCG+CGG | 0.761555 | 4_4:+72152902 | Msa0700960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTGAAAAGTTATTTTT+TGG | + | chr4_4:72154665-72154684 | Msa0700960:intron | 10.0% |
!! | AAATATAATTAAAACAAAAG+AGG | - | chr4_4:72156155-72156174 | None:intergenic | 10.0% |
!!! | CATTTATATTTTCATTTAAT+TGG | + | chr4_4:72156735-72156754 | Msa0700960:intron | 10.0% |
!!! | ATTTAAATATAGTTGATTTA+AGG | - | chr4_4:72157111-72157130 | None:intergenic | 10.0% |
!! | TTAAATCAACTATATTTAAA+TGG | + | chr4_4:72157110-72157129 | Msa0700960:intron | 10.0% |
!!! | AAGTTTTATTTATTATAGTA+TGG | + | chr4_4:72158142-72158161 | Msa0700960:intron | 10.0% |
!!! | AAGAAAAGATTATAAATTTT+TGG | - | chr4_4:72160809-72160828 | None:intergenic | 10.0% |
!!! | ATGTATATTTTGAATTTTTT+TGG | + | chr4_4:72162411-72162430 | Msa0700960:intron | 10.0% |
!!! | TGTATATTTTGAATTTTTTT+GGG | + | chr4_4:72162412-72162431 | Msa0700960:intron | 10.0% |
!!! | TTTTTTTTTGATGTTTATAA+AGG | - | chr4_4:72162468-72162487 | None:intergenic | 10.0% |
!! | TCATATTAGAATTCAATTTA+AGG | - | chr4_4:72154805-72154824 | None:intergenic | 15.0% |
!!! | ATGAAAATATGTGATTTTTT+TGG | + | chr4_4:72154821-72154840 | Msa0700960:intron | 15.0% |
!! | ATAAATAATGACTTAACAAA+TGG | - | chr4_4:72156351-72156370 | None:intergenic | 15.0% |
!! | TTTATTAATTGAATAAACTG+TGG | + | chr4_4:72156366-72156385 | Msa0700960:intron | 15.0% |
!! | AACTATATTTAAATGGAAAA+GGG | + | chr4_4:72157117-72157136 | Msa0700960:intron | 15.0% |
!!! | ATGTGTTTAATATTTTGTTT+TGG | + | chr4_4:72157157-72157176 | Msa0700960:intron | 15.0% |
!! | AAATAATAATTGAAACAGTT+AGG | - | chr4_4:72158547-72158566 | None:intergenic | 15.0% |
!!! | TTAATAATTTGTTTCAGTTT+AGG | + | chr4_4:72158892-72158911 | Msa0700960:intron | 15.0% |
!! | TTAGATTGTTAAATATATGA+TGG | + | chr4_4:72159166-72159185 | Msa0700960:intron | 15.0% |
!! | TACATTTATGTACTAAAAAA+AGG | - | chr4_4:72159810-72159829 | None:intergenic | 15.0% |
!! | AAAATATTAAATTAGTCCAA+AGG | - | chr4_4:72160926-72160945 | None:intergenic | 15.0% |
!!! | TTTTTAGGTATTTTTTTGTT+AGG | + | chr4_4:72161741-72161760 | Msa0700960:intron | 15.0% |
!!! | TATAGAATGAGAAAATTTTA+TGG | - | chr4_4:72162268-72162287 | None:intergenic | 15.0% |
!!! | ATAAAATTTTCTCATTCTAT+AGG | + | chr4_4:72162267-72162286 | Msa0700960:intron | 15.0% |
!!! | AAAATTTTCCATTAATAGTT+TGG | + | chr4_4:72162305-72162324 | Msa0700960:intron | 15.0% |
!! | ATCAAAAAAAAAAAATCTAG+TGG | + | chr4_4:72162476-72162495 | Msa0700960:intron | 15.0% |
!!! | TAATTCTTTTTATGTTAACT+AGG | + | chr4_4:72162744-72162763 | Msa0700960:intron | 15.0% |
!! | AAAAAAAAAAACAATACAAC+AGG | - | chr4_4:72163308-72163327 | None:intergenic | 15.0% |
!!! | AATTTTATTCAGTGTTTATC+TGG | + | chr4_4:72153515-72153534 | Msa0700960:intron | 20.0% |
!!! | TAAATAAAAGCATAAAGCAA+CGG | - | chr4_4:72154188-72154207 | None:intergenic | 20.0% |
!!! | TATACATGTCTTATTTTGAA+AGG | + | chr4_4:72154214-72154233 | Msa0700960:intron | 20.0% |
!!! | AGAAATGGTTTTATCAATTT+AGG | + | chr4_4:72154583-72154602 | Msa0700960:intron | 20.0% |
!! | GTTTGTAATAGCTTAAAAAA+TGG | - | chr4_4:72154779-72154798 | None:intergenic | 20.0% |
!! | GAAATTGAATATATATCTCA+AGG | + | chr4_4:72155046-72155065 | Msa0700960:intron | 20.0% |
!! | GGAAACTAATAATAATTTCA+AGG | - | chr4_4:72155410-72155429 | None:intergenic | 20.0% |
!!! | TATGTTTTTCTTTCAACTTA+GGG | - | chr4_4:72156107-72156126 | None:intergenic | 20.0% |
!!! | ATATGTTTTTCTTTCAACTT+AGG | - | chr4_4:72156108-72156127 | None:intergenic | 20.0% |
!! | TAAAGAATAGAACAAAACAA+AGG | - | chr4_4:72156305-72156324 | None:intergenic | 20.0% |
!!! | TTGTTTTGTTCTATTCTTTA+TGG | + | chr4_4:72156305-72156324 | Msa0700960:intron | 20.0% |
!! | AAATATAAATGTTGAAGAAC+AGG | - | chr4_4:72156726-72156745 | None:intergenic | 20.0% |
!! | CAACTATATTTAAATGGAAA+AGG | + | chr4_4:72157116-72157135 | Msa0700960:intron | 20.0% |
!!! | GTTTAATATTTTGTTTTGGT+AGG | + | chr4_4:72157161-72157180 | Msa0700960:intron | 20.0% |
!! | ATCATAAAAGATATTACAGA+TGG | - | chr4_4:72157488-72157507 | None:intergenic | 20.0% |
!! | GTACAAAAAAGAATGTTAAA+AGG | - | chr4_4:72158088-72158107 | None:intergenic | 20.0% |
!! | TTAGAAAGAAATGCAAATTT+GGG | - | chr4_4:72158985-72159004 | None:intergenic | 20.0% |
!! | TTTAGAAAGAAATGCAAATT+TGG | - | chr4_4:72158986-72159005 | None:intergenic | 20.0% |
!!! | ATAAATAATGGTAATGCATA+AGG | - | chr4_4:72159136-72159155 | None:intergenic | 20.0% |
!! | TCTTATTAATACTTGATGTT+GGG | + | chr4_4:72159443-72159462 | Msa0700960:intron | 20.0% |
!! | TCTCTTTGTACTTATTATTA+TGG | + | chr4_4:72159472-72159491 | Msa0700960:intron | 20.0% |
!! | TTTATGTACTAAAAAAAGGA+AGG | - | chr4_4:72159806-72159825 | None:intergenic | 20.0% |
!! | AATACAAAGAAATACTAACT+TGG | - | chr4_4:72160058-72160077 | None:intergenic | 20.0% |
!!! | AAGGTGTCAAATATTTTAAA+AGG | - | chr4_4:72160132-72160151 | None:intergenic | 20.0% |
!!! | CTTTGAGTTTTTAAAATTAG+TGG | + | chr4_4:72160458-72160477 | Msa0700960:intron | 20.0% |
!! | AAAAGCTTGAACAATAAAAA+TGG | - | chr4_4:72161301-72161320 | None:intergenic | 20.0% |
!! | TATCTTAGTATTGTTAAACA+TGG | - | chr4_4:72161696-72161715 | None:intergenic | 20.0% |
!!! | AGATTTTTGTTTTTGATGAA+AGG | + | chr4_4:72162123-72162142 | Msa0700960:intron | 20.0% |
!! | TTGATGAAAGGAAATTTAAT+AGG | + | chr4_4:72162135-72162154 | Msa0700960:intron | 20.0% |
!!! | TAAGTGTACATGATTATTTT+TGG | + | chr4_4:72162219-72162238 | Msa0700960:intron | 20.0% |
!! | CAAAATATACATGTTTACAA+AGG | - | chr4_4:72162403-72162422 | None:intergenic | 20.0% |
!!! | TGAATTTTTTTGGGAAAAAT+TGG | + | chr4_4:72162421-72162440 | Msa0700960:intron | 20.0% |
!! | AATTTGTAGTTGTAAAAGTT+AGG | - | chr4_4:72162553-72162572 | None:intergenic | 20.0% |
!! | CTAAAAATAAATTACCTACT+CGG | - | chr4_4:72163545-72163564 | None:intergenic | 20.0% |
! | ACTGAAGAAAAATATCATGA+AGG | - | chr4_4:72153436-72153455 | None:intergenic | 25.0% |
!!! | ATGTTAGACTTTTTCCTTTT+TGG | + | chr4_4:72154124-72154143 | Msa0700960:intron | 25.0% |
! | TCATAACAACATAACCAAAA+AGG | - | chr4_4:72154141-72154160 | None:intergenic | 25.0% |
! | AAACTAACTAGTTAAACCAA+AGG | - | chr4_4:72154452-72154471 | None:intergenic | 25.0% |
!!! | GTCATTTTTAGTGTTTGTTT+AGG | + | chr4_4:72154552-72154571 | Msa0700960:intron | 25.0% |
!!! | GTTTAGGATTTTTAGAGAAA+TGG | + | chr4_4:72154568-72154587 | Msa0700960:intron | 25.0% |
!!! | AGATTTTTGTTGTCAACTTA+AGG | + | chr4_4:72155077-72155096 | Msa0700960:intron | 25.0% |
!!! | TTGGTTTTTCTTTCAACTTA+GGG | - | chr4_4:72155578-72155597 | None:intergenic | 25.0% |
!!! | ATTGGTTTTTCTTTCAACTT+AGG | - | chr4_4:72155579-72155598 | None:intergenic | 25.0% |
! | AAGTTGAAAGAAAAACCAAT+TGG | + | chr4_4:72155579-72155598 | Msa0700960:intron | 25.0% |
!!! | GATTTTTGTTGTGAACTTAA+AGG | + | chr4_4:72155633-72155652 | Msa0700960:intron | 25.0% |
! | ACATATTATCTCATTGTTGT+TGG | + | chr4_4:72156041-72156060 | Msa0700960:intron | 25.0% |
!! | CATATTATCTCATTGTTGTT+GGG | + | chr4_4:72156042-72156061 | Msa0700960:intron | 25.0% |
! | TATTGTCGTTCACTTAAATT+TGG | + | chr4_4:72156604-72156623 | Msa0700960:intron | 25.0% |
! | ATTTCAGAATGGTAAACAAA+TGG | + | chr4_4:72156636-72156655 | Msa0700960:intron | 25.0% |
! | TTTACACTTTGATCTTCTTT+AGG | + | chr4_4:72156767-72156786 | Msa0700960:intron | 25.0% |
! | TGCAAAATATCAAGTTCAAA+TGG | - | chr4_4:72157000-72157019 | None:intergenic | 25.0% |
!! | ATTTTGCAATTGCAACTTAA+TGG | + | chr4_4:72157012-72157031 | Msa0700960:intron | 25.0% |
!! | TTTTGCAATTGCAACTTAAT+GGG | + | chr4_4:72157013-72157032 | Msa0700960:intron | 25.0% |
! | GAAAGAACGAAGTAATTTAA+TGG | - | chr4_4:72157089-72157108 | None:intergenic | 25.0% |
! | TTCTACCCAAATAATTAACT+AGG | - | chr4_4:72157242-72157261 | None:intergenic | 25.0% |
!!! | CTTTTATTTTGTAGCTTAAG+TGG | + | chr4_4:72157983-72158002 | Msa0700960:intron | 25.0% |
! | GCATCATAAAATAATTGATG+AGG | - | chr4_4:72158377-72158396 | None:intergenic | 25.0% |
!!! | CATCAATTATTTTATGATGC+AGG | + | chr4_4:72158377-72158396 | Msa0700960:intron | 25.0% |
! | TGGAAATAAAATTTAAGGAG+TGG | - | chr4_4:72158420-72158439 | None:intergenic | 25.0% |
! | AATGGACAAACATTAAGAAT+GGG | - | chr4_4:72158734-72158753 | None:intergenic | 25.0% |
! | ATTGTGAAATTCATATGTTC+TGG | + | chr4_4:72158766-72158785 | Msa0700960:intron | 25.0% |
! | TATACTCTCAAAACAAAAGA+CGG | - | chr4_4:72158811-72158830 | None:intergenic | 25.0% |
! | TAGGTATAAATTTGAGAAAC+CGG | + | chr4_4:72158911-72158930 | Msa0700960:intron | 25.0% |
! | AAATATCATCTAGATTGATC+CGG | - | chr4_4:72158933-72158952 | None:intergenic | 25.0% |
! | AACAAGACAATCATAAAACA+GGG | - | chr4_4:72159356-72159375 | None:intergenic | 25.0% |
! | TAACAAGACAATCATAAAAC+AGG | - | chr4_4:72159357-72159376 | None:intergenic | 25.0% |
!!! | TTTTATGATTGTCTTGTTAG+AGG | + | chr4_4:72159358-72159377 | Msa0700960:intron | 25.0% |
!! | GTCTTATTAATACTTGATGT+TGG | + | chr4_4:72159442-72159461 | Msa0700960:intron | 25.0% |
! | AAACAGTAGTAAAAAAACAG+AGG | - | chr4_4:72159596-72159615 | None:intergenic | 25.0% |
! | ACATAAATGTAAACCACTAT+TGG | + | chr4_4:72159819-72159838 | Msa0700960:intron | 25.0% |
! | TTTAAACCTTCACATTTACT+TGG | + | chr4_4:72160082-72160101 | Msa0700960:intron | 25.0% |
!!! | GTGTCAAATATTTTAAAAGG+AGG | - | chr4_4:72160129-72160148 | None:intergenic | 25.0% |
! | AGAAAAACTAAATACAGATG+TGG | - | chr4_4:72160290-72160309 | None:intergenic | 25.0% |
!! | TAAGCAAACTACAATTTTCA+TGG | - | chr4_4:72160417-72160436 | None:intergenic | 25.0% |
!! | TTCTTTCAATGAACATTTTC+AGG | + | chr4_4:72160640-72160659 | Msa0700960:intron | 25.0% |
!! | TGACTTTTAGTCTATTGTTT+TGG | + | chr4_4:72160982-72161001 | Msa0700960:intron | 25.0% |
!!! | TAGTCTATTGTTTTGGATAT+AGG | + | chr4_4:72160989-72161008 | Msa0700960:intron | 25.0% |
!!! | AGTCTATTGTTTTGGATATA+GGG | + | chr4_4:72160990-72161009 | Msa0700960:intron | 25.0% |
! | TACTCAATATAACAAAAGGT+TGG | - | chr4_4:72161458-72161477 | None:intergenic | 25.0% |
!! | GTGTTACTCAATATAACAAA+AGG | - | chr4_4:72161462-72161481 | None:intergenic | 25.0% |
!!! | TTTTCTTTTACCTGCTTTTA+TGG | + | chr4_4:72161657-72161676 | Msa0700960:intron | 25.0% |
!!! | AACTGTTTGAGTTTCTTTTT+AGG | + | chr4_4:72161726-72161745 | Msa0700960:intron | 25.0% |
! | TCAATCAAATCACCTTTAAT+GGG | - | chr4_4:72161844-72161863 | None:intergenic | 25.0% |
!! | CTTTTTGGATAGCTTAATTT+AGG | - | chr4_4:72162098-72162117 | None:intergenic | 25.0% |
!!! | ACAAAAATCTGTTCACTTTT+TGG | - | chr4_4:72162113-72162132 | None:intergenic | 25.0% |
!!! | ATTTTTGTCCTGTTGTTTTT+CGG | - | chr4_4:72162198-72162217 | None:intergenic | 25.0% |
!!! | ACATGATTATTTTTGGCATA+TGG | + | chr4_4:72162226-72162245 | Msa0700960:intron | 25.0% |
!!! | AAATATATGCTCACTTTTCT+AGG | - | chr4_4:72162337-72162356 | None:intergenic | 25.0% |
! | AATTAACTAGTTGTACAGAA+AGG | - | chr4_4:72162650-72162669 | None:intergenic | 25.0% |
!! | TTTTCTCGGATAATACATAT+TGG | + | chr4_4:72162691-72162710 | Msa0700960:intron | 25.0% |
! | GAAAGGGAAAGAAAAAAAAA+AGG | - | chr4_4:72163334-72163353 | None:intergenic | 25.0% |
! | TCAAAATCTGATATCAGAAA+GGG | - | chr4_4:72163350-72163369 | None:intergenic | 25.0% |
! | TTCAAAATCTGATATCAGAA+AGG | - | chr4_4:72163351-72163370 | None:intergenic | 25.0% |
! | GGTTAATTCTGATGTTTATT+TGG | + | chr4_4:72163512-72163531 | Msa0700960:three_prime_UTR | 25.0% |
! | TCTGATGTTTATTTGGATAT+TGG | + | chr4_4:72163519-72163538 | Msa0700960:three_prime_UTR | 25.0% |
!! | CGAAATCGATTTAGCATTTT+CGG | - | chr4_4:72153225-72153244 | None:intergenic | 30.0% |
AACAACCTACTAATAAACTG+CGG | - | chr4_4:72153833-72153852 | None:intergenic | 30.0% | |
! | TATTCTGATGAAGATGCTTT+TGG | + | chr4_4:72153856-72153875 | Msa0700960:CDS | 30.0% |
GATAGGTTATCGATATCTTT+GGG | + | chr4_4:72153971-72153990 | Msa0700960:intron | 30.0% | |
!! | GATAAAAACTTTAGAGCAAG+TGG | + | chr4_4:72154241-72154260 | Msa0700960:CDS | 30.0% |
CAATTGTCCAATTGCATTAA+TGG | - | chr4_4:72154321-72154340 | None:intergenic | 30.0% | |
TGATATTGAACTTGCAAATC+CGG | - | chr4_4:72154359-72154378 | None:intergenic | 30.0% | |
TTGCAAGTTCAATATCATCA+AGG | + | chr4_4:72154362-72154381 | Msa0700960:CDS | 30.0% | |
TGCAAGTTCAATATCATCAA+GGG | + | chr4_4:72154363-72154382 | Msa0700960:CDS | 30.0% | |
! | TAGTTTTCTCGCAACTATTA+AGG | + | chr4_4:72154466-72154485 | Msa0700960:intron | 30.0% |
! | AGTTTTCTCGCAACTATTAA+GGG | + | chr4_4:72154467-72154486 | Msa0700960:intron | 30.0% |
!! | TTTTCAGCAAAGTGCTTTTT+TGG | + | chr4_4:72154607-72154626 | Msa0700960:intron | 30.0% |
AAGTTGACAACAAAAATCTG+AGG | - | chr4_4:72155076-72155095 | None:intergenic | 30.0% | |
AAAAGCAGGAAATAACATGA+CGG | + | chr4_4:72155149-72155168 | Msa0700960:intron | 30.0% | |
! | GACTAAACCTTTTTCTTCAA+CGG | + | chr4_4:72155222-72155241 | Msa0700960:intron | 30.0% |
! | TTTTCATCCGTTGAAGAAAA+AGG | - | chr4_4:72155232-72155251 | None:intergenic | 30.0% |
! | TATTATTAGTTTCCATCCGT+TGG | + | chr4_4:72155416-72155435 | Msa0700960:intron | 30.0% |
ACAATGATAAACATCATTGC+AGG | + | chr4_4:72155474-72155493 | Msa0700960:intron | 30.0% | |
TAGGTTTCTCATTATCTTCT+TGG | + | chr4_4:72155532-72155551 | Msa0700960:intron | 30.0% | |
ACTTAAAGGTTAAAAACGAG+TGG | + | chr4_4:72155647-72155666 | Msa0700960:intron | 30.0% | |
CTTAAAGGTTAAAAACGAGT+GGG | + | chr4_4:72155648-72155667 | Msa0700960:intron | 30.0% | |
! | GACAAAACCTTTTTCTTCAA+TGG | + | chr4_4:72155770-72155789 | Msa0700960:intron | 30.0% |
! | AAACCTTTTTCTTCAATGGA+TGG | + | chr4_4:72155774-72155793 | Msa0700960:intron | 30.0% |
TTACCATCCATTGAAGAAAA+AGG | - | chr4_4:72155780-72155799 | None:intergenic | 30.0% | |
GATGGTAACTGATACTTTAA+AGG | + | chr4_4:72155792-72155811 | Msa0700960:intron | 30.0% | |
!!! | AAGCTTTTTTCTTCAACAGA+TGG | - | chr4_4:72155980-72155999 | None:intergenic | 30.0% |
TTTCCTAATATTGTTCACAC+AGG | + | chr4_4:72156398-72156417 | Msa0700960:intron | 30.0% | |
AAGTATGGCGTTAAAATTTC+AGG | - | chr4_4:72156468-72156487 | None:intergenic | 30.0% | |
!! | TGAAATTTTAACGCCATACT+TGG | + | chr4_4:72156467-72156486 | Msa0700960:CDS | 30.0% |
!! | TACTTCTTCAGGTTAGTTTA+TGG | + | chr4_4:72156514-72156533 | Msa0700960:intron | 30.0% |
GGATATTCTGTATTTCAGAA+TGG | + | chr4_4:72156625-72156644 | Msa0700960:intron | 30.0% | |
TGACAGCATCATAATATTTC+TGG | - | chr4_4:72156800-72156819 | None:intergenic | 30.0% | |
AGAACGAAGTAATTTAATGG+TGG | - | chr4_4:72157086-72157105 | None:intergenic | 30.0% | |
ATAGCAAGATCACAAAATGT+AGG | - | chr4_4:72157208-72157227 | None:intergenic | 30.0% | |
CCAAATAATTAACTAGGATC+GGG | - | chr4_4:72157236-72157255 | None:intergenic | 30.0% | |
CCCAAATAATTAACTAGGAT+CGG | - | chr4_4:72157237-72157256 | None:intergenic | 30.0% | |
CCGATCCTAGTTAATTATTT+GGG | + | chr4_4:72157234-72157253 | Msa0700960:intron | 30.0% | |
TTCTACCCAAATAATTACCA+AGG | - | chr4_4:72157320-72157339 | None:intergenic | 30.0% | |
ATGTTAGATTGAAACTAGGA+TGG | - | chr4_4:72157348-72157367 | None:intergenic | 30.0% | |
AAGATATTACAGATGGTGTT+GGG | - | chr4_4:72157481-72157500 | None:intergenic | 30.0% | |
AAAGATATTACAGATGGTGT+TGG | - | chr4_4:72157482-72157501 | None:intergenic | 30.0% | |
AGTAAAGAACCATGATATGT+AGG | - | chr4_4:72157525-72157544 | None:intergenic | 30.0% | |
ACATATCATGGTTCTTTACT+AGG | + | chr4_4:72157525-72157544 | Msa0700960:intron | 30.0% | |
CTTATACACAAATTGCCAAT+TGG | + | chr4_4:72157646-72157665 | Msa0700960:intron | 30.0% | |
!!! | TGACAGGTTTTATTTGTTAC+AGG | + | chr4_4:72157685-72157704 | Msa0700960:intron | 30.0% |
!!! | GTTTTATTTGTTACAGGCAT+GGG | + | chr4_4:72157691-72157710 | Msa0700960:intron | 30.0% |
! | GCAAGATTTTCTTCCTTATA+TGG | + | chr4_4:72157736-72157755 | Msa0700960:CDS | 30.0% |
! | TAGATGATTCTGATGATGAA+AGG | + | chr4_4:72157840-72157859 | Msa0700960:CDS | 30.0% |
! | GAGAAAAGTGTGTGATAAAA+GGG | - | chr4_4:72157912-72157931 | None:intergenic | 30.0% |
! | AGAGAAAAGTGTGTGATAAA+AGG | - | chr4_4:72157913-72157932 | None:intergenic | 30.0% |
!! | TGTAGTGTTTGTTATCCAAA+TGG | + | chr4_4:72158012-72158031 | Msa0700960:intron | 30.0% |
CCTCGTGGAAATAAAATTTA+AGG | - | chr4_4:72158425-72158444 | None:intergenic | 30.0% | |
!! | CCTTAAATTTTATTTCCACG+AGG | + | chr4_4:72158422-72158441 | Msa0700960:CDS | 30.0% |
!! | TAAATTTTATTTCCACGAGG+AGG | + | chr4_4:72158425-72158444 | Msa0700960:CDS | 30.0% |
ATGGACAAACATTAAGAATG+GGG | - | chr4_4:72158733-72158752 | None:intergenic | 30.0% | |
GAATGGACAAACATTAAGAA+TGG | - | chr4_4:72158735-72158754 | None:intergenic | 30.0% | |
CACAATAAAACAGCAAAGAA+TGG | - | chr4_4:72158752-72158771 | None:intergenic | 30.0% | |
AGAAATTTGTGCAAGTATGT+TGG | + | chr4_4:72159043-72159062 | Msa0700960:CDS | 30.0% | |
TTCAGTAAATGAATGCTTAC+AGG | + | chr4_4:72159067-72159086 | Msa0700960:CDS | 30.0% | |
TAAATGAATGCTTACAGGTT+CGG | + | chr4_4:72159072-72159091 | Msa0700960:intron | 30.0% | |
!! | GTAGACTGTTTTTCTATAAG+AGG | - | chr4_4:72159224-72159243 | None:intergenic | 30.0% |
!!! | GTCAACTACTTATTTTTACG+AGG | + | chr4_4:72159627-72159646 | Msa0700960:intron | 30.0% |
TGATATTATTGTTCACGTGA+AGG | + | chr4_4:72159731-72159750 | Msa0700960:intron | 30.0% | |
TATAAGAGAACATCCAATAG+TGG | - | chr4_4:72159835-72159854 | None:intergenic | 30.0% | |
!!! | GTTTTTGTTTTACAGATCTC+CGG | + | chr4_4:72159858-72159877 | Msa0700960:intron | 30.0% |
!!! | TTTTTGTTTTACAGATCTCC+GGG | + | chr4_4:72159859-72159878 | Msa0700960:intron | 30.0% |
AATAGTTGAAGAGGTAAAAC+AGG | + | chr4_4:72159911-72159930 | Msa0700960:CDS | 30.0% | |
GATGACAATTCTTCAAAGAA+AGG | - | chr4_4:72160227-72160246 | None:intergenic | 30.0% | |
! | ATCTTATTTGACTCCTATGT+GGG | + | chr4_4:72160244-72160263 | Msa0700960:CDS | 30.0% |
ACTCTAAATACTTAAGAGCA+GGG | - | chr4_4:72160567-72160586 | None:intergenic | 30.0% | |
AACTCTAAATACTTAAGAGC+AGG | - | chr4_4:72160568-72160587 | None:intergenic | 30.0% | |
! | GTTTCATTTTGCAAATTGAC+TGG | + | chr4_4:72160861-72160880 | Msa0700960:intron | 30.0% |
!!! | TATTGTTTTGGATATAGGGA+AGG | + | chr4_4:72160994-72161013 | Msa0700960:intron | 30.0% |
!!! | ATTGTTTTGGATATAGGGAA+GGG | + | chr4_4:72160995-72161014 | Msa0700960:intron | 30.0% |
TATCATAATACCTGCTCAAT+TGG | - | chr4_4:72161182-72161201 | None:intergenic | 30.0% | |
! | AGCTTTTCGATTGTTGATAT+TGG | + | chr4_4:72161314-72161333 | Msa0700960:intron | 30.0% |
! | GTATTTCTTCATATTTCTGC+AGG | + | chr4_4:72161336-72161355 | Msa0700960:intron | 30.0% |
TCATATGCCATTACATTATC+TGG | - | chr4_4:72161552-72161571 | None:intergenic | 30.0% | |
AAAAATTTGCCAATTTCACC+AGG | + | chr4_4:72161593-72161612 | Msa0700960:CDS | 30.0% | |
GGGAAAATAAATAAAGACCT+GGG | - | chr4_4:72161634-72161653 | None:intergenic | 30.0% | |
AGGGAAAATAAATAAAGACC+TGG | - | chr4_4:72161635-72161654 | None:intergenic | 30.0% | |
AAGCAGGTAAAAGAAAAACA+GGG | - | chr4_4:72161654-72161673 | None:intergenic | 30.0% | |
AAAGCAGGTAAAAGAAAAAC+AGG | - | chr4_4:72161655-72161674 | None:intergenic | 30.0% | |
AAGAACAAAACCATAAAAGC+AGG | - | chr4_4:72161670-72161689 | None:intergenic | 30.0% | |
CTCAATCAAATCACCTTTAA+TGG | - | chr4_4:72161845-72161864 | None:intergenic | 30.0% | |
CATTAAAGGTGATTTGATTG+AGG | + | chr4_4:72161843-72161862 | Msa0700960:CDS | 30.0% | |
!!! | TTTTTTTTGTCCTATTGCTC+TGG | + | chr4_4:72161931-72161950 | Msa0700960:intron | 30.0% |
AAAATTAGAACCAGAGCAAT+AGG | - | chr4_4:72161944-72161963 | None:intergenic | 30.0% | |
! | AATTTTCCTTGTATATCTGC+AGG | + | chr4_4:72161958-72161977 | Msa0700960:intron | 30.0% |
GGATAGCTTAATTTAGGTAA+AGG | - | chr4_4:72162092-72162111 | None:intergenic | 30.0% | |
! | AAAATTTTGAACGCTTGACA+TGG | - | chr4_4:72162293-72162312 | None:intergenic | 30.0% |
TATAAACGTTATGAACAGAG+AGG | - | chr4_4:72162608-72162627 | None:intergenic | 30.0% | |
GAAAGGCTTATAAATATCAG+AGG | - | chr4_4:72162633-72162652 | None:intergenic | 30.0% | |
! | ATTAATTGACTTCACAATCC+AGG | + | chr4_4:72162667-72162686 | Msa0700960:intron | 30.0% |
ACTATGCAAACTATGAAGAA+AGG | - | chr4_4:72162921-72162940 | None:intergenic | 30.0% | |
CATCTTATGGCAAAAAGAAT+GGG | - | chr4_4:72163052-72163071 | None:intergenic | 30.0% | |
ATGTGTATATTGAGTGTTCA+TGG | + | chr4_4:72163150-72163169 | Msa0700960:three_prime_UTR | 30.0% | |
GGCAAGAACAAAATAAAAAG+AGG | - | chr4_4:72163234-72163253 | None:intergenic | 30.0% | |
GCAAACTTGATAAATAGCAT+CGG | - | chr4_4:72163392-72163411 | None:intergenic | 30.0% | |
ATCGACGACAAATTATTACT+TGG | - | chr4_4:72163430-72163449 | None:intergenic | 30.0% | |
!!! | ATTTAGTTTTTGAGCGTGTT+TGG | + | chr4_4:72163594-72163613 | Msa0700960:three_prime_UTR | 30.0% |
AACATAAACGGAAGCAATTC+AGG | - | chr4_4:72153308-72153327 | None:intergenic | 35.0% | |
GAAACGCACTGAAACATAAA+CGG | - | chr4_4:72153320-72153339 | None:intergenic | 35.0% | |
!! | TCATGAAGGTGTTTGATATG+CGG | - | chr4_4:72153422-72153441 | None:intergenic | 35.0% |
ATCCTGAAACCTATCTCTAT+CGG | - | chr4_4:72153546-72153565 | None:intergenic | 35.0% | |
!! | TAGGTTTCAGGATTTGTTAC+CGG | + | chr4_4:72153553-72153572 | Msa0700960:CDS | 35.0% |
! | GAAGATGCTTTTGGATATTG+AGG | + | chr4_4:72153865-72153884 | Msa0700960:CDS | 35.0% |
GAATCTAGCAACTATAGTGT+TGG | + | chr4_4:72153935-72153954 | Msa0700960:CDS | 35.0% | |
GGATAGGTTATCGATATCTT+TGG | + | chr4_4:72153970-72153989 | Msa0700960:intron | 35.0% | |
TGAACAATTACCTGCGTATT+TGG | + | chr4_4:72154021-72154040 | Msa0700960:CDS | 35.0% | |
!! | AAAAACTTTAGAGCAAGTGG+TGG | + | chr4_4:72154244-72154263 | Msa0700960:CDS | 35.0% |
! | TGGACAATTGTCTACTGATT+TGG | + | chr4_4:72154331-72154350 | Msa0700960:CDS | 35.0% |
!! | GGACAATTGTCTACTGATTT+GGG | + | chr4_4:72154332-72154351 | Msa0700960:CDS | 35.0% |
GCAAGTTCAATATCATCAAG+GGG | + | chr4_4:72154364-72154383 | Msa0700960:CDS | 35.0% | |
TTAAGGTCTAAAGAACGAGT+GGG | + | chr4_4:72155094-72155113 | Msa0700960:intron | 35.0% | |
!! | TATTTCCTGCTTTTGTTGCT+GGG | - | chr4_4:72155143-72155162 | None:intergenic | 35.0% |
!! | TTATTTCCTGCTTTTGTTGC+TGG | - | chr4_4:72155144-72155163 | None:intergenic | 35.0% |
AAAGCAGGAAATAACATGAC+GGG | + | chr4_4:72155150-72155169 | Msa0700960:intron | 35.0% | |
GACGATAATGAACATCATCA+TGG | - | chr4_4:72155181-72155200 | None:intergenic | 35.0% | |
TTTCTTCAACGGATGAAAAC+TGG | + | chr4_4:72155233-72155252 | Msa0700960:intron | 35.0% | |
TGTTAGACGATTCTTGGAAT+CGG | - | chr4_4:72155344-72155363 | None:intergenic | 35.0% | |
! | AAGTGTTGTTAGACGATTCT+TGG | - | chr4_4:72155350-72155369 | None:intergenic | 35.0% |
ATTTCATTGCCTTTGTTGCT+AGG | + | chr4_4:72155513-72155532 | Msa0700960:intron | 35.0% | |
AATGAGAAACCTAGCAACAA+AGG | - | chr4_4:72155525-72155544 | None:intergenic | 35.0% | |
!! | TTGGTTTTTCACTCGTTCTT+TGG | + | chr4_4:72155551-72155570 | Msa0700960:intron | 35.0% |
! | TATTTCCACCTTTTGTGGTT+GGG | - | chr4_4:72155697-72155716 | None:intergenic | 35.0% |
! | TTATTTCCACCTTTTGTGGT+TGG | - | chr4_4:72155698-72155717 | None:intergenic | 35.0% |
!!! | CATGTTATTTCCACCTTTTG+TGG | - | chr4_4:72155702-72155721 | None:intergenic | 35.0% |
ATGGAAACTGAGAATTCCAA+GGG | - | chr4_4:72155961-72155980 | None:intergenic | 35.0% | |
TGGGTTTCTCATTATCTTCT+TGG | + | chr4_4:72156061-72156080 | Msa0700960:intron | 35.0% | |
!! | ATTTTAACGCCATACTTGGA+TGG | + | chr4_4:72156471-72156490 | Msa0700960:CDS | 35.0% |
CTAACTATTCCATCCAAGTA+TGG | - | chr4_4:72156483-72156502 | None:intergenic | 35.0% | |
CAAATTGCTTGTACTTCTTC+AGG | + | chr4_4:72156503-72156522 | Msa0700960:CDS | 35.0% | |
AGTGATAGTAGCATTGCTAT+TGG | - | chr4_4:72156550-72156569 | None:intergenic | 35.0% | |
ATAGCAATGCTACTATCACT+AGG | + | chr4_4:72156550-72156569 | Msa0700960:intron | 35.0% | |
TAGCAATGCTACTATCACTA+GGG | + | chr4_4:72156551-72156570 | Msa0700960:intron | 35.0% | |
GTCTATGGAATGCATAAGTT+TGG | + | chr4_4:72156884-72156903 | Msa0700960:CDS | 35.0% | |
ATGGAATGCATAAGTTTGGT+TGG | + | chr4_4:72156888-72156907 | Msa0700960:CDS | 35.0% | |
ATGCATAAGTTTGGTTGGAA+TGG | + | chr4_4:72156893-72156912 | Msa0700960:CDS | 35.0% | |
TGTCGGAAAGGAGAAATTTA+GGG | + | chr4_4:72156917-72156936 | Msa0700960:CDS | 35.0% | |
TGGAGTTCGACAGAAATATA+TGG | - | chr4_4:72156980-72156999 | None:intergenic | 35.0% | |
! | AGTAATTTAATGGTGGAGTG+TGG | - | chr4_4:72157079-72157098 | None:intergenic | 35.0% |
TTTGGTAGGATCTTAGATCT+TGG | + | chr4_4:72157175-72157194 | Msa0700960:intron | 35.0% | |
AATAATTAACTAGGATCGGG+AGG | - | chr4_4:72157233-72157252 | None:intergenic | 35.0% | |
CCCGATCCTAGTTAATTATT+TGG | + | chr4_4:72157233-72157252 | Msa0700960:intron | 35.0% | |
CCAAATAATTACCAAGGATC+GGG | - | chr4_4:72157314-72157333 | None:intergenic | 35.0% | |
CCCAAATAATTACCAAGGAT+CGG | - | chr4_4:72157315-72157334 | None:intergenic | 35.0% | |
! | CCGATCCTTGGTAATTATTT+GGG | + | chr4_4:72157312-72157331 | Msa0700960:intron | 35.0% |
CAGCATGTTAGATTGAAACT+AGG | - | chr4_4:72157352-72157371 | None:intergenic | 35.0% | |
AGTTTCAATCTAACATGCTG+CGG | + | chr4_4:72157352-72157371 | Msa0700960:intron | 35.0% | |
! | AGAATGCATTCTCTTTTCTG+CGG | + | chr4_4:72157430-72157449 | Msa0700960:intron | 35.0% |
! | AGATATTACAGATGGTGTTG+GGG | - | chr4_4:72157480-72157499 | None:intergenic | 35.0% |
CTTTACCATCCTACATATCA+TGG | + | chr4_4:72157513-72157532 | Msa0700960:intron | 35.0% | |
AAGAACCATGATATGTAGGA+TGG | - | chr4_4:72157521-72157540 | None:intergenic | 35.0% | |
!! | TGTAGCATGTAACTTGTTGT+TGG | - | chr4_4:72157601-72157620 | None:intergenic | 35.0% |
AACAACAAGTTACATGCTAC+AGG | + | chr4_4:72157600-72157619 | Msa0700960:CDS | 35.0% | |
TACTGAACATATGGTCCAAT+TGG | - | chr4_4:72157664-72157683 | None:intergenic | 35.0% | |
!! | ACCATATGTTCAGTATTGAC+AGG | + | chr4_4:72157669-72157688 | Msa0700960:intron | 35.0% |
ACCTGTCAATACTGAACATA+TGG | - | chr4_4:72157673-72157692 | None:intergenic | 35.0% | |
!!! | GGTTTTATTTGTTACAGGCA+TGG | + | chr4_4:72157690-72157709 | Msa0700960:intron | 35.0% |
GGCATGACAAATTCCATATA+AGG | - | chr4_4:72157752-72157771 | None:intergenic | 35.0% | |
! | GTGAAGAGCATATAACCATT+TGG | - | chr4_4:72158030-72158049 | None:intergenic | 35.0% |
ATTTCACATGCTTCACACAT+GGG | + | chr4_4:72158050-72158069 | Msa0700960:intron | 35.0% | |
AGTATGGAAACTATCACTCT+CGG | + | chr4_4:72158158-72158177 | Msa0700960:intron | 35.0% | |
GAATCCTTCTTTCAACTCAT+CGG | - | chr4_4:72158258-72158277 | None:intergenic | 35.0% | |
TGAAAGAAGGATTCTTTCCA+TGG | + | chr4_4:72158264-72158283 | Msa0700960:CDS | 35.0% | |
! | ATTCTTTCCATGGATTGATC+AGG | + | chr4_4:72158274-72158293 | Msa0700960:CDS | 35.0% |
! | TATTTTATGATGCAGGTTGC+AGG | + | chr4_4:72158384-72158403 | Msa0700960:intron | 35.0% |
GATCATTCTCATACCTGAAA+CGG | - | chr4_4:72158463-72158482 | None:intergenic | 35.0% | |
! | GAGAATGATCGTTTGTGTTT+TGG | + | chr4_4:72158473-72158492 | Msa0700960:intron | 35.0% |
CAATATCTCTATAGCAATGC+CGG | + | chr4_4:72158568-72158587 | Msa0700960:intron | 35.0% | |
CAAAGTTAGCCATTGAGAAA+GGG | + | chr4_4:72158606-72158625 | Msa0700960:CDS | 35.0% | |
TGTGAATTACAGCAACAACT+AGG | - | chr4_4:72159192-72159211 | None:intergenic | 35.0% | |
TAAAACAGGGCGAAATCAAA+CGG | - | chr4_4:72159343-72159362 | None:intergenic | 35.0% | |
!!! | CTACTTATTTTTACGAGGCA+AGG | + | chr4_4:72159632-72159651 | Msa0700960:intron | 35.0% |
! | AAAAGAGATGGAGAGTACAT+GGG | - | chr4_4:72159663-72159682 | None:intergenic | 35.0% |
! | AAAAAGAGATGGAGAGTACA+TGG | - | chr4_4:72159664-72159683 | None:intergenic | 35.0% |
TTGCAGTGAACAAAAAGAGA+TGG | - | chr4_4:72159675-72159694 | None:intergenic | 35.0% | |
! | CTCTCTTTTTCTACTTGAAC+TGG | - | chr4_4:72159946-72159965 | None:intergenic | 35.0% |
AGCATCAAAATCTTCAGCTT+GGG | - | chr4_4:72159982-72160001 | None:intergenic | 35.0% | |
!! | TGAAGATTTTGATGCTGAAG+AGG | + | chr4_4:72159986-72160005 | Msa0700960:CDS | 35.0% |
!! | GAAGATTTTGATGCTGAAGA+GGG | + | chr4_4:72159987-72160006 | Msa0700960:CDS | 35.0% |
!! | AAGATTTTGATGCTGAAGAG+GGG | + | chr4_4:72159988-72160007 | Msa0700960:CDS | 35.0% |
! | ATTTGACACCTTTGTTTGCT+TGG | + | chr4_4:72160140-72160159 | Msa0700960:intron | 35.0% |
!!! | TGCTTTGAAGGTTTTGATCA+AGG | - | chr4_4:72160195-72160214 | None:intergenic | 35.0% |
TTCTTCAAAGAAAGGCAAGA+AGG | - | chr4_4:72160219-72160238 | None:intergenic | 35.0% | |
! | CATCTTATTTGACTCCTATG+TGG | + | chr4_4:72160243-72160262 | Msa0700960:CDS | 35.0% |
! | CAATCACCACAACTTTAAGA+AGG | - | chr4_4:72160377-72160396 | None:intergenic | 35.0% |
GAAAACAGACAGAAAATCAG+AGG | - | chr4_4:72160676-72160695 | None:intergenic | 35.0% | |
CACTGAACAAATCAAGAACA+AGG | - | chr4_4:72160727-72160746 | None:intergenic | 35.0% | |
AATATCACTGCATGCTTAAG+TGG | - | chr4_4:72161122-72161141 | None:intergenic | 35.0% | |
TACGTATCTTCCATTCTTGT+TGG | + | chr4_4:72161200-72161219 | Msa0700960:CDS | 35.0% | |
GCTTCATCCAGATAATGTAA+TGG | + | chr4_4:72161542-72161561 | Msa0700960:CDS | 35.0% | |
TCACGATCAACTTTGTTCTA+TGG | + | chr4_4:72161876-72161895 | Msa0700960:CDS | 35.0% | |
!! | TGGGAAGGTATTGATTGTTT+GGG | - | chr4_4:72162004-72162023 | None:intergenic | 35.0% |
!! | TTGGGAAGGTATTGATTGTT+TGG | - | chr4_4:72162005-72162024 | None:intergenic | 35.0% |
ATACCTTCCCAAAATAGTAG+CGG | + | chr4_4:72162013-72162032 | Msa0700960:CDS | 35.0% | |
! | GCAAATACCGCTACTATTTT+GGG | - | chr4_4:72162023-72162042 | None:intergenic | 35.0% |
! | TGCAAATACCGCTACTATTT+TGG | - | chr4_4:72162024-72162043 | None:intergenic | 35.0% |
GCTTAATTTAGGTAAAGGCA+GGG | - | chr4_4:72162087-72162106 | None:intergenic | 35.0% | |
AGCTTAATTTAGGTAAAGGC+AGG | - | chr4_4:72162088-72162107 | None:intergenic | 35.0% | |
TAAGCAATCATACTTCCACT+GGG | - | chr4_4:72162175-72162194 | None:intergenic | 35.0% | |
ATTGCTTACCGAAAAACAAC+AGG | + | chr4_4:72162187-72162206 | Msa0700960:intron | 35.0% | |
! | GAGTTTGTGCTGTTAATTCT+TGG | - | chr4_4:72162531-72162550 | None:intergenic | 35.0% |
! | TTCACAATCCAGGTTTTTCT+CGG | + | chr4_4:72162677-72162696 | Msa0700960:intron | 35.0% |
TGTATTATCCGAGAAAAACC+TGG | - | chr4_4:72162688-72162707 | None:intergenic | 35.0% | |
!! | GTTAACTAGGTTTTATGTGC+TGG | + | chr4_4:72162757-72162776 | Msa0700960:intron | 35.0% |
GTCTGAGTAAACTAACCATT+CGG | - | chr4_4:72162813-72162832 | None:intergenic | 35.0% | |
TGCAAACTATGAAGAAAGGA+TGG | - | chr4_4:72162917-72162936 | None:intergenic | 35.0% | |
AAATATAGAGACCACCAAAC+TGG | - | chr4_4:72163025-72163044 | None:intergenic | 35.0% | |
CCATCTTATGGCAAAAAGAA+TGG | - | chr4_4:72163053-72163072 | None:intergenic | 35.0% | |
! | CCATTCTTTTTGCCATAAGA+TGG | + | chr4_4:72163050-72163069 | Msa0700960:three_prime_UTR | 35.0% |
! | GAATGATGGAAACCATCTTA+TGG | - | chr4_4:72163065-72163084 | None:intergenic | 35.0% |
CCATATGCAAGAATGAATGA+TGG | - | chr4_4:72163079-72163098 | None:intergenic | 35.0% | |
CCATCATTCATTCTTGCATA+TGG | + | chr4_4:72163076-72163095 | Msa0700960:three_prime_UTR | 35.0% | |
!! | ATGGTGTTTTTATAGCAGCA+TGG | + | chr4_4:72163095-72163114 | Msa0700960:three_prime_UTR | 35.0% |
CACAGATTCAGGAATATAAG+TGG | - | chr4_4:72163464-72163483 | None:intergenic | 35.0% | |
! | TTGTTGTAGCTGAGTTGACT+CGG | - | chr4_4:72152892-72152911 | None:intergenic | 40.0% |
TGTGAGATCAGAGTCTCAAA+CGG | - | chr4_4:72152951-72152970 | None:intergenic | 40.0% | |
CTATGTCCGCTATTCTTCTT+CGG | + | chr4_4:72153105-72153124 | Msa0700960:CDS | 40.0% | |
TTGCTTCCGAAGAAGAATAG+CGG | - | chr4_4:72153114-72153133 | None:intergenic | 40.0% | |
TTTGAGAGAAGCTTGAGTGT+TGG | - | chr4_4:72153177-72153196 | None:intergenic | 40.0% | |
TCGAGTATATTGCCGGATAA+CGG | + | chr4_4:72153278-72153297 | Msa0700960:CDS | 40.0% | |
GCTCAATTGTCGCAGTATAT+TGG | + | chr4_4:72153383-72153402 | Msa0700960:CDS | 40.0% | |
AAAGCAGCAATTCTGACATC+AGG | - | chr4_4:72153482-72153501 | None:intergenic | 40.0% | |
TGAGTTGCTTATTGAGCTTG+CGG | + | chr4_4:72153640-72153659 | Msa0700960:CDS | 40.0% | |
AGGCAGATTGTTGATGTTGT+TGG | + | chr4_4:72153686-72153705 | Msa0700960:intron | 40.0% | |
TGATTACTCTTGCTGAAGCT+AGG | + | chr4_4:72153777-72153796 | Msa0700960:CDS | 40.0% | |
GATTACTCTTGCTGAAGCTA+GGG | + | chr4_4:72153778-72153797 | Msa0700960:CDS | 40.0% | |
AGATGCCGCAGTTTATTAGT+AGG | + | chr4_4:72153825-72153844 | Msa0700960:CDS | 40.0% | |
! | TAGCAACTATAGTGTTGGAC+AGG | + | chr4_4:72153940-72153959 | Msa0700960:CDS | 40.0% |
AGGTTATCGATATCTTTGGG+AGG | + | chr4_4:72153974-72153993 | Msa0700960:intron | 40.0% | |
GGTAATTGTTCAGAAGCAAC+AGG | - | chr4_4:72154013-72154032 | None:intergenic | 40.0% | |
!! | ATTGTCTACTGATTTGGGTC+CGG | + | chr4_4:72154337-72154356 | Msa0700960:CDS | 40.0% |
! | TTGGAAGTGTGTAAGAGCTA+TGG | + | chr4_4:72154840-72154859 | Msa0700960:intron | 40.0% |
CTTAAGGTCTAAAGAACGAG+TGG | + | chr4_4:72155093-72155112 | Msa0700960:intron | 40.0% | |
! | TGGGTTCGTCATTCTTTTGT+TGG | - | chr4_4:72155124-72155143 | None:intergenic | 40.0% |
AAGCAGGAAATAACATGACG+GGG | + | chr4_4:72155151-72155170 | Msa0700960:intron | 40.0% | |
GGTTTAGTCTACTACAGTCA+AGG | - | chr4_4:72155211-72155230 | None:intergenic | 40.0% | |
GTTAGACGATTCTTGGAATC+GGG | - | chr4_4:72155343-72155362 | None:intergenic | 40.0% | |
ATGTCCTTGACGGTTATTCT+AGG | - | chr4_4:72155378-72155397 | None:intergenic | 40.0% | |
GACATTGACAATGTCCTTGA+CGG | - | chr4_4:72155388-72155407 | None:intergenic | 40.0% | |
TTTCCATCCGTTGGAGAAAA+AGG | + | chr4_4:72155425-72155444 | Msa0700960:intron | 40.0% | |
! | GACAAAGCCTTTTTCTCCAA+CGG | - | chr4_4:72155435-72155454 | None:intergenic | 40.0% |
ACACACACACACAAACCAAT+TGG | - | chr4_4:72155597-72155616 | None:intergenic | 40.0% | |
GTTTGTGTGTGTGTGTATCA+AGG | + | chr4_4:72155601-72155620 | Msa0700960:intron | 40.0% | |
GTGTGTATCAAGGACTAGAT+TGG | + | chr4_4:72155611-72155630 | Msa0700960:intron | 40.0% | |
TGGGAAAACCTACAAGAGAA+TGG | + | chr4_4:72155667-72155686 | Msa0700960:intron | 40.0% | |
!! | GGTTTTGTCTACTAGAGTCA+AGG | - | chr4_4:72155759-72155778 | None:intergenic | 40.0% |
! | ATGTCCTTGATGGTTGATCA+CGG | + | chr4_4:72155827-72155846 | Msa0700960:intron | 40.0% |
CGATTCTTGGAATCATGTGA+AGG | - | chr4_4:72155888-72155907 | None:intergenic | 40.0% | |
GATGGAAACTGAGAATTCCA+AGG | - | chr4_4:72155962-72155981 | None:intergenic | 40.0% | |
TTGGTTTCTCACTCGTTCTT+TGG | + | chr4_4:72156080-72156099 | Msa0700960:intron | 40.0% | |
GAGCCTGTGTGAACAATATT+AGG | - | chr4_4:72156404-72156423 | None:intergenic | 40.0% | |
TGGTAAACAAATGGTGCAAG+AGG | + | chr4_4:72156645-72156664 | Msa0700960:CDS | 40.0% | |
GGTAAACAAATGGTGCAAGA+GGG | + | chr4_4:72156646-72156665 | Msa0700960:CDS | 40.0% | |
!! | ATCAGTTGCTGATTCATCTC+AGG | + | chr4_4:72156687-72156706 | Msa0700960:CDS | 40.0% |
ACCAATATAGCCTTCAGGTA+CGG | - | chr4_4:72156825-72156844 | None:intergenic | 40.0% | |
CATTGACCAATATAGCCTTC+AGG | - | chr4_4:72156830-72156849 | None:intergenic | 40.0% | |
CTGTCGGAAAGGAGAAATTT+AGG | + | chr4_4:72156916-72156935 | Msa0700960:CDS | 40.0% | |
! | CAACTTAATGGGTCAAGAGT+GGG | + | chr4_4:72157024-72157043 | Msa0700960:intron | 40.0% |
AATAATTACCAAGGATCGGG+AGG | - | chr4_4:72157311-72157330 | None:intergenic | 40.0% | |
! | CCCGATCCTTGGTAATTATT+TGG | + | chr4_4:72157311-72157330 | Msa0700960:intron | 40.0% |
CCTGACTAAAGATCAGTAGA+GGG | - | chr4_4:72157386-72157405 | None:intergenic | 40.0% | |
TCCTGACTAAAGATCAGTAG+AGG | - | chr4_4:72157387-72157406 | None:intergenic | 40.0% | |
! | ATATTACAGATGGTGTTGGG+GGG | - | chr4_4:72157478-72157497 | None:intergenic | 40.0% |
! | GATATTACAGATGGTGTTGG+GGG | - | chr4_4:72157479-72157498 | None:intergenic | 40.0% |
CATGGTTCTTTACTAGGTCA+TGG | + | chr4_4:72157531-72157550 | Msa0700960:intron | 40.0% | |
GAAGTTCTTATGTCCTTGCA+AGG | + | chr4_4:72157553-72157572 | Msa0700960:CDS | 40.0% | |
CATTTCACATGCTTCACACA+TGG | + | chr4_4:72158049-72158068 | Msa0700960:intron | 40.0% | |
ACTCTCGGTGACAAAAGAAT+TGG | + | chr4_4:72158173-72158192 | Msa0700960:CDS | 40.0% | |
TGGAATCAAGACTAGTGTTC+TGG | + | chr4_4:72158193-72158212 | Msa0700960:CDS | 40.0% | |
AATCAAGACTAGTGTTCTGG+AGG | + | chr4_4:72158196-72158215 | Msa0700960:CDS | 40.0% | |
! | TATGCCGATGAGTTGAAAGA+AGG | + | chr4_4:72158251-72158270 | Msa0700960:CDS | 40.0% |
AGTCTAACCTGATCAATCCA+TGG | - | chr4_4:72158284-72158303 | None:intergenic | 40.0% | |
!! | TATGCAAAAGCGTTCGATAG+TGG | - | chr4_4:72158319-72158338 | None:intergenic | 40.0% |
TTTGCAGATCGTAATAGCTC+CGG | - | chr4_4:72158590-72158609 | None:intergenic | 40.0% | |
GCAAAGTTAGCCATTGAGAA+AGG | + | chr4_4:72158605-72158624 | Msa0700960:CDS | 40.0% | |
TTGAGATTGCCCTTTCTCAA+TGG | - | chr4_4:72158618-72158637 | None:intergenic | 40.0% | |
ATTGAGAAAGGGCAATCTCA+AGG | + | chr4_4:72158617-72158636 | Msa0700960:CDS | 40.0% | |
!! | TTTGGTGGAAGCATTGCATA+AGG | + | chr4_4:72158688-72158707 | Msa0700960:CDS | 40.0% |
! | ATTTGGGATTCATCCAATCC+AGG | - | chr4_4:72158969-72158988 | None:intergenic | 40.0% |
TCCTGCAATCAAACAGAAGT+GGG | - | chr4_4:72159014-72159033 | None:intergenic | 40.0% | |
TTCCTGCAATCAAACAGAAG+TGG | - | chr4_4:72159015-72159034 | None:intergenic | 40.0% | |
CTTGCACAAATTTCTGTGTC+AGG | - | chr4_4:72159038-72159057 | None:intergenic | 40.0% | |
CACAAACTTCCCCTATTTCA+CGG | + | chr4_4:72159410-72159429 | Msa0700960:intron | 40.0% | |
AGAGTTGTTCCGTGAAATAG+GGG | - | chr4_4:72159422-72159441 | None:intergenic | 40.0% | |
CAGAGTTGTTCCGTGAAATA+GGG | - | chr4_4:72159423-72159442 | None:intergenic | 40.0% | |
ACAGAGTTGTTCCGTGAAAT+AGG | - | chr4_4:72159424-72159443 | None:intergenic | 40.0% | |
! | AGTGAAGGCACATCAAATTC+TGG | - | chr4_4:72159537-72159556 | None:intergenic | 40.0% |
TTGATGTGCCTTCACTATCA+AGG | + | chr4_4:72159541-72159560 | Msa0700960:intron | 40.0% | |
!!! | CTTTTCATCCAAAAGCATCC+CGG | - | chr4_4:72159880-72159899 | None:intergenic | 40.0% |
! | GATGCTTTTGGATGAAAAGC+AGG | + | chr4_4:72159881-72159900 | Msa0700960:CDS | 40.0% |
GGTCAAGTCAATAGTTGAAG+AGG | + | chr4_4:72159902-72159921 | Msa0700960:CDS | 40.0% | |
AAAAAGAGAGAGAGCAGAGA+GGG | + | chr4_4:72159956-72159975 | Msa0700960:CDS | 40.0% | |
CAGCATCAAAATCTTCAGCT+TGG | - | chr4_4:72159983-72160002 | None:intergenic | 40.0% | |
!! | AGATTTTGATGCTGAAGAGG+GGG | + | chr4_4:72159989-72160008 | Msa0700960:CDS | 40.0% |
GATTAAAGAGGAAAACGAGC+AGG | + | chr4_4:72160016-72160035 | Msa0700960:CDS | 40.0% | |
TAGCAGCCAAGTAAATGTGA+AGG | - | chr4_4:72160091-72160110 | None:intergenic | 40.0% | |
TTTAAGAAGGTCCAGGTTCA+GGG | - | chr4_4:72160364-72160383 | None:intergenic | 40.0% | |
TATTTCGTTGCCAATTGAGC+AGG | + | chr4_4:72161169-72161188 | Msa0700960:intron | 40.0% | |
GTATCTTCCATTCTTGTTGG+AGG | + | chr4_4:72161203-72161222 | Msa0700960:CDS | 40.0% | |
TTACATGCCTCCAACAAGAA+TGG | - | chr4_4:72161213-72161232 | None:intergenic | 40.0% | |
TGAAACTCCAGATGTTAGAC+AGG | + | chr4_4:72161236-72161255 | Msa0700960:CDS | 40.0% | |
ATGCTAACCTGTCTAACATC+TGG | - | chr4_4:72161246-72161265 | None:intergenic | 40.0% | |
TCTGTGTTCAAACCTCTTGT+TGG | + | chr4_4:72161400-72161419 | Msa0700960:CDS | 40.0% | |
CACATTTGTGACTTATGCAG+AGG | + | chr4_4:72161479-72161498 | Msa0700960:intron | 40.0% | |
TTATCTGGATGAAGCGCATT+AGG | - | chr4_4:72161537-72161556 | None:intergenic | 40.0% | |
CAATACTGTCCTGGTGAAAT+TGG | - | chr4_4:72161605-72161624 | None:intergenic | 40.0% | |
TTGAACTGTCTGCCCATTAA+AGG | + | chr4_4:72161829-72161848 | Msa0700960:CDS | 40.0% | |
CGATCAACTTTGTTCTATGG+CGG | + | chr4_4:72161879-72161898 | Msa0700960:CDS | 40.0% | |
!! | ATACCGCTACTATTTTGGGA+AGG | - | chr4_4:72162019-72162038 | None:intergenic | 40.0% |
AATAGTAGCGGTATTTGCAG+AGG | + | chr4_4:72162025-72162044 | Msa0700960:CDS | 40.0% | |
GAAAACAAAGCTATACCCAG+TGG | + | chr4_4:72162157-72162176 | Msa0700960:intron | 40.0% | |
GTAAGCAATCATACTTCCAC+TGG | - | chr4_4:72162176-72162195 | None:intergenic | 40.0% | |
CATATGGCTACAACAGTAGT+AGG | + | chr4_4:72162242-72162261 | Msa0700960:intron | 40.0% | |
GAGAGGCTTATAAACATCAG+AGG | - | chr4_4:72162591-72162610 | None:intergenic | 40.0% | |
TGTAAAGCAAGCTGTTGTTG+CGG | - | chr4_4:72162892-72162911 | None:intergenic | 40.0% | |
ATCGTTTCTCCATAGCATCT+GGG | + | chr4_4:72162957-72162976 | Msa0700960:three_prime_UTR | 40.0% | |
!! | GGAACAAGCTTTTTCCAGTT+TGG | + | chr4_4:72163008-72163027 | Msa0700960:three_prime_UTR | 40.0% |
!! | ACAAGCTTTTTCCAGTTTGG+TGG | + | chr4_4:72163011-72163030 | Msa0700960:three_prime_UTR | 40.0% |
! | ACAACTGTCTAACCTCCTTT+TGG | - | chr4_4:72163187-72163206 | None:intergenic | 40.0% |
AGGTTAGACAGTTGTTGCAT+CGG | + | chr4_4:72163192-72163211 | Msa0700960:three_prime_UTR | 40.0% | |
! | CCCTATTTTCTCACGCAATA+CGG | - | chr4_4:72163255-72163274 | None:intergenic | 40.0% |
CCGTATTGCGTGAGAAAATA+GGG | + | chr4_4:72163252-72163271 | Msa0700960:three_prime_UTR | 40.0% | |
TGAGAAAATAGGGTTGTCTG+TGG | + | chr4_4:72163262-72163281 | Msa0700960:three_prime_UTR | 40.0% | |
GAGAAAATAGGGTTGTCTGT+GGG | + | chr4_4:72163263-72163282 | Msa0700960:three_prime_UTR | 40.0% | |
AGAAAATAGGGTTGTCTGTG+GGG | + | chr4_4:72163264-72163283 | Msa0700960:three_prime_UTR | 40.0% | |
TGTGACTTCCGTAGTGTATA+TGG | + | chr4_4:72163480-72163499 | Msa0700960:three_prime_UTR | 40.0% | |
AGCACGATCCATATACACTA+CGG | - | chr4_4:72163491-72163510 | None:intergenic | 40.0% | |
TAGTGTATATGGATCGTGCT+CGG | + | chr4_4:72163491-72163510 | Msa0700960:three_prime_UTR | 40.0% | |
TATTTGGATATTGGCCGAGT+AGG | + | chr4_4:72163528-72163547 | Msa0700960:three_prime_UTR | 40.0% | |
! | TGTTGTAGCTGAGTTGACTC+GGG | - | chr4_4:72152891-72152910 | None:intergenic | 45.0% |
!! | AGTCTCAAACGGTGATGGAT+CGG | - | chr4_4:72152940-72152959 | None:intergenic | 45.0% |
ATCAGAGTCTCAAACGGTGA+TGG | - | chr4_4:72152945-72152964 | None:intergenic | 45.0% | |
TTGAGAACGTTCTTCGTTGG+TGG | - | chr4_4:72152985-72153004 | None:intergenic | 45.0% | |
ATAGCACGAGCTTCTTGATG+AGG | - | chr4_4:72153089-72153108 | None:intergenic | 45.0% | |
ACTCGCTTCGAGTATATTGC+CGG | + | chr4_4:72153271-72153290 | Msa0700960:CDS | 45.0% | |
! | GTATATTGCCGGATAACGGT+TGG | + | chr4_4:72153282-72153301 | Msa0700960:CDS | 45.0% |
AATTCAGGCCAACCGTTATC+CGG | - | chr4_4:72153293-72153312 | None:intergenic | 45.0% | |
TCAGTGCGTTTCGTCTGATT+CGG | + | chr4_4:72153328-72153347 | Msa0700960:CDS | 45.0% | |
CTGAAACCTATCTCTATCGG+CGG | - | chr4_4:72153543-72153562 | None:intergenic | 45.0% | |
GAGTTGCTTATTGAGCTTGC+GGG | + | chr4_4:72153641-72153660 | Msa0700960:CDS | 45.0% | |
AGTTGCTTATTGAGCTTGCG+GGG | + | chr4_4:72153642-72153661 | Msa0700960:CDS | 45.0% | |
ATCTGCCTCCTCAAAAACCT+AGG | - | chr4_4:72153674-72153693 | None:intergenic | 45.0% | |
TGGTGCAATGCTTCAGATTG+CGG | + | chr4_4:72153706-72153725 | Msa0700960:intron | 45.0% | |
! | AGTCCCTTCCTCTAAAGACT+CGG | - | chr4_4:72153735-72153754 | None:intergenic | 45.0% |
! | AGTCTTTAGAGGAAGGGACT+AGG | + | chr4_4:72153735-72153754 | Msa0700960:CDS | 45.0% |
ATATTGAGGATGATCCCGCA+TGG | + | chr4_4:72153879-72153898 | Msa0700960:CDS | 45.0% | |
GATACTGAAGATGAGGATGC+TGG | + | chr4_4:72153911-72153930 | Msa0700960:CDS | 45.0% | |
!! | TAGTGTTGGACAGGAGTGTT+TGG | + | chr4_4:72153949-72153968 | Msa0700960:intron | 45.0% |
!! | TTGGACAGGAGTGTTTGGAT+AGG | + | chr4_4:72153954-72153973 | Msa0700960:intron | 45.0% |
! | TTTAGAGCAAGTGGTGGCTA+TGG | + | chr4_4:72154250-72154269 | Msa0700960:CDS | 45.0% |
ACGAGGATGTTGATCAGGAA+AGG | - | chr4_4:72154285-72154304 | None:intergenic | 45.0% | |
CTTACACGAGGATGTTGATC+AGG | - | chr4_4:72154290-72154309 | None:intergenic | 45.0% | |
CTGATCAACATCCTCGTGTA+AGG | + | chr4_4:72154288-72154307 | Msa0700960:CDS | 45.0% | |
ATCAACATCCTCGTGTAAGG+TGG | + | chr4_4:72154291-72154310 | Msa0700960:CDS | 45.0% | |
TCAACATCCTCGTGTAAGGT+GGG | + | chr4_4:72154292-72154311 | Msa0700960:CDS | 45.0% | |
TGGGCAGCCATTAATGCAAT+TGG | + | chr4_4:72154311-72154330 | Msa0700960:CDS | 45.0% | |
! | GGGATTCTGGAAATCATCCA+TGG | - | chr4_4:72154411-72154430 | None:intergenic | 45.0% |
AGCAGGAAATAACATGACGG+GGG | + | chr4_4:72155152-72155171 | Msa0700960:intron | 45.0% | |
GTGTCCTAGAATAACCGTCA+AGG | + | chr4_4:72155371-72155390 | Msa0700960:intron | 45.0% | |
! | AAGCCTTTTTCTCCAACGGA+TGG | - | chr4_4:72155431-72155450 | None:intergenic | 45.0% |
TGGGTTTGCCATTCTCTTGT+AGG | - | chr4_4:72155678-72155697 | None:intergenic | 45.0% | |
ATGGCAAACCCAACCACAAA+AGG | + | chr4_4:72155686-72155705 | Msa0700960:intron | 45.0% | |
TGCTGCTGTTAGACGATTCT+TGG | - | chr4_4:72155901-72155920 | None:intergenic | 45.0% | |
AACTGATGCCAAAGCAGTCA+AGG | - | chr4_4:72156674-72156693 | None:intergenic | 45.0% | |
ACCGTACCTGAAGGCTATAT+TGG | + | chr4_4:72156821-72156840 | Msa0700960:CDS | 45.0% | |
TAGACTTAGCACGAAGCATG+CGG | - | chr4_4:72156869-72156888 | None:intergenic | 45.0% | |
CATGCTTCGTGCTAAGTCTA+TGG | + | chr4_4:72156869-72156888 | Msa0700960:CDS | 45.0% | |
AGTTTGGTTGGAATGGCTGT+CGG | + | chr4_4:72156900-72156919 | Msa0700960:CDS | 45.0% | |
! | ATTTAGGGCTGATGCTAAGC+AGG | + | chr4_4:72156932-72156951 | Msa0700960:CDS | 45.0% |
! | GCAACTTAATGGGTCAAGAG+TGG | + | chr4_4:72157023-72157042 | Msa0700960:intron | 45.0% |
AATCTAACATGCTGCGGTCT+TGG | + | chr4_4:72157358-72157377 | Msa0700960:intron | 45.0% | |
CCCTCTACTGATCTTTAGTC+AGG | + | chr4_4:72157383-72157402 | Msa0700960:intron | 45.0% | |
! | TATTACAGATGGTGTTGGGG+GGG | - | chr4_4:72157477-72157496 | None:intergenic | 45.0% |
GTCCTTGCAAGGATCACAAA+TGG | + | chr4_4:72157564-72157583 | Msa0700960:CDS | 45.0% | |
CTCCATTTGTGATCCTTGCA+AGG | - | chr4_4:72157569-72157588 | None:intergenic | 45.0% | |
AGTGAAGCAGACTGAAGCAA+TGG | - | chr4_4:72157776-72157795 | None:intergenic | 45.0% | |
GTCTGAATCAGCAGATGTGA+TGG | - | chr4_4:72157813-72157832 | None:intergenic | 45.0% | |
! | AAGCGTTCGATAGTGGTCTA+AGG | - | chr4_4:72158312-72158331 | None:intergenic | 45.0% |
! | GTTAGAAAAGCTGCCGTTTC+AGG | + | chr4_4:72158447-72158466 | Msa0700960:CDS | 45.0% |
AGAAAGGGCAATCTCAAGGT+CGG | + | chr4_4:72158621-72158640 | Msa0700960:CDS | 45.0% | |
TGACAGTATCATCCCAGCTT+TGG | + | chr4_4:72158670-72158689 | Msa0700960:CDS | 45.0% | |
TATTTGTGCTGCACTTTGCC+TGG | + | chr4_4:72158948-72158967 | Msa0700960:intron | 45.0% | |
TCCCACTTCTGTTTGATTGC+AGG | + | chr4_4:72159010-72159029 | Msa0700960:intron | 45.0% | |
AAGTAACAACAGTGCCAGTG+GGG | - | chr4_4:72159252-72159271 | None:intergenic | 45.0% | |
CAAGTAACAACAGTGCCAGT+GGG | - | chr4_4:72159253-72159272 | None:intergenic | 45.0% | |
TCAAGTAACAACAGTGCCAG+TGG | - | chr4_4:72159254-72159273 | None:intergenic | 45.0% | |
ACTACTGATGCTGTATGTGC+TGG | + | chr4_4:72159278-72159297 | Msa0700960:intron | 45.0% | |
!! | ATTCGACGCCTTGATAGTGA+AGG | - | chr4_4:72159552-72159571 | None:intergenic | 45.0% |
GAAAAAGAGAGAGAGCAGAG+AGG | + | chr4_4:72159955-72159974 | Msa0700960:CDS | 45.0% | |
TAAAGAGGAAAACGAGCAGG+AGG | + | chr4_4:72160019-72160038 | Msa0700960:CDS | 45.0% | |
AAAGGAGGACCAGCAAACAA+AGG | - | chr4_4:72160114-72160133 | None:intergenic | 45.0% | |
GATAGCAGCCAAGCAAACAA+AGG | - | chr4_4:72160151-72160170 | None:intergenic | 45.0% | |
TTGTTTGCTTGGCTGCTATC+AGG | + | chr4_4:72160151-72160170 | Msa0700960:intron | 45.0% | |
TATCAGGTGGGCGAGATATT+GGG | + | chr4_4:72160167-72160186 | Msa0700960:intron | 45.0% | |
AGGCAAGAAGGATGCTTTGA+AGG | - | chr4_4:72160207-72160226 | None:intergenic | 45.0% | |
ATACAGATGTGGTAGCTTCC+TGG | - | chr4_4:72160279-72160298 | None:intergenic | 45.0% | |
! | CTTTAAGAAGGTCCAGGTTC+AGG | - | chr4_4:72160365-72160384 | None:intergenic | 45.0% |
! | CCACAACTTTAAGAAGGTCC+AGG | - | chr4_4:72160371-72160390 | None:intergenic | 45.0% |
CCTGGACCTTCTTAAAGTTG+TGG | + | chr4_4:72160368-72160387 | Msa0700960:intron | 45.0% | |
! | TCATGCAGTCTAAGATGCAC+AGG | - | chr4_4:72160768-72160787 | None:intergenic | 45.0% |
ACTTCGAGCAGATTTCCTAC+AGG | + | chr4_4:72160893-72160912 | Msa0700960:intron | 45.0% | |
TCCTACAGGATTTGAGCCTT+TGG | + | chr4_4:72160907-72160926 | Msa0700960:intron | 45.0% | |
TCCAAAGGCTCAAATCCTGT+AGG | - | chr4_4:72160911-72160930 | None:intergenic | 45.0% | |
ACAAGACTCCTGAAGAGAGA+AGG | + | chr4_4:72161018-72161037 | Msa0700960:CDS | 45.0% | |
ATTGCGATCCTTCTCTCTTC+AGG | - | chr4_4:72161029-72161048 | None:intergenic | 45.0% | |
! | CTTCATATTTCTGCAGGCAG+CGG | + | chr4_4:72161342-72161361 | Msa0700960:intron | 45.0% |
! | TCGGTGTTTGTGCTGAGTTT+GGG | + | chr4_4:72161374-72161393 | Msa0700960:CDS | 45.0% |
GTGTTCAAACCTCTTGTTGG+AGG | + | chr4_4:72161403-72161422 | Msa0700960:CDS | 45.0% | |
TAAGCAGTACCTCCAACAAG+AGG | - | chr4_4:72161415-72161434 | None:intergenic | 45.0% | |
GATGAAGCGCATTAGGATGT+TGG | - | chr4_4:72161530-72161549 | None:intergenic | 45.0% | |
TGACAATGCAGTTTCTGCTC+TGG | + | chr4_4:72161569-72161588 | Msa0700960:CDS | 45.0% | |
GACAATGCAGTTTCTGCTCT+GGG | + | chr4_4:72161570-72161589 | Msa0700960:CDS | 45.0% | |
TAATCTCCTGCTGCATTTGC+AGG | + | chr4_4:72161792-72161811 | Msa0700960:intron | 45.0% | |
! | AACTTTGTTCTATGGCGGAG+AGG | + | chr4_4:72161884-72161903 | Msa0700960:CDS | 45.0% |
GGCAGTCGCCAAACTATTAA+TGG | - | chr4_4:72162316-72162335 | None:intergenic | 45.0% | |
CAGCTGTTTGTTCTGTTGCA+AGG | - | chr4_4:72162789-72162808 | None:intergenic | 45.0% | |
CTTGCAACAGAACAAACAGC+TGG | + | chr4_4:72162787-72162806 | Msa0700960:CDS | 45.0% | |
CATCGTTTCTCCATAGCATC+TGG | + | chr4_4:72162956-72162975 | Msa0700960:three_prime_UTR | 45.0% | |
TTTCTCCATAGCATCTGGGT+TGG | + | chr4_4:72162961-72162980 | Msa0700960:three_prime_UTR | 45.0% | |
!! | AGTTGGTGTCTCGCACTTTT+TGG | + | chr4_4:72162985-72163004 | Msa0700960:three_prime_UTR | 45.0% |
!! | GTTGGTGTCTCGCACTTTTT+GGG | + | chr4_4:72162986-72163005 | Msa0700960:three_prime_UTR | 45.0% |
!! | TTGGTGTCTCGCACTTTTTG+GGG | + | chr4_4:72162987-72163006 | Msa0700960:three_prime_UTR | 45.0% |
ATGGTGCGATTGAGTCCAAA+AGG | + | chr4_4:72163169-72163188 | Msa0700960:three_prime_UTR | 45.0% | |
GCCGTATTGCGTGAGAAAAT+AGG | + | chr4_4:72163251-72163270 | Msa0700960:three_prime_UTR | 45.0% | |
ACTACGGAAGTCACAGATTC+AGG | - | chr4_4:72163475-72163494 | None:intergenic | 45.0% | |
!!! | AAATTCTAAAAAATAAATAA+TGG | - | chr4_4:72159148-72159167 | None:intergenic | 5.0% |
GCTACAACAATCCCAACTCG+CGG | + | chr4_4:72152902-72152921 | Msa0700960:CDS | 50.0% | |
GGCTTGAGAACGTTCTTCGT+TGG | - | chr4_4:72152988-72153007 | None:intergenic | 50.0% | |
GCAGAGGTTGAAGAGAGCTT+CGG | - | chr4_4:72153009-72153028 | None:intergenic | 50.0% | |
!! | CTGGATCGGTTTGTTTGCAG+AGG | - | chr4_4:72153025-72153044 | None:intergenic | 50.0% |
CAAAACGAGTGCGTCTGGAT+CGG | - | chr4_4:72153039-72153058 | None:intergenic | 50.0% | |
AGCTTCAAAACGAGTGCGTC+TGG | - | chr4_4:72153044-72153063 | None:intergenic | 50.0% | |
!!! | GACGCACTCGTTTTGAAGCT+AGG | + | chr4_4:72153044-72153063 | Msa0700960:intron | 50.0% |
CGCGTGATGATTCATTCCTC+TGG | + | chr4_4:72153138-72153157 | Msa0700960:CDS | 50.0% | |
!! | TGAGTGTTGGACGAAAGACG+AGG | - | chr4_4:72153164-72153183 | None:intergenic | 50.0% |
CGCCGATAGAGATAGGTTTC+AGG | + | chr4_4:72153541-72153560 | Msa0700960:CDS | 50.0% | |
GTCAACGTCGTCATCATAGC+CGG | - | chr4_4:72153575-72153594 | None:intergenic | 50.0% | |
! | GGCTATGATGACGACGTTGA+CGG | + | chr4_4:72153574-72153593 | Msa0700960:CDS | 50.0% |
! | TATGATGACGACGTTGACGG+AGG | + | chr4_4:72153577-72153596 | Msa0700960:CDS | 50.0% |
!! | TTGACGGAGGCGTTGAATTC+AGG | + | chr4_4:72153590-72153609 | Msa0700960:CDS | 50.0% |
! | GGCGTTGAATTCAGGTCAAG+AGG | + | chr4_4:72153598-72153617 | Msa0700960:CDS | 50.0% |
! | GGACTGAGCCTAGGTTTTTG+AGG | + | chr4_4:72153663-72153682 | Msa0700960:CDS | 50.0% |
!! | CTGAGCCTAGGTTTTTGAGG+AGG | + | chr4_4:72153666-72153685 | Msa0700960:CDS | 50.0% |
TGCAATGCTTCAGATTGCGG+AGG | + | chr4_4:72153709-72153728 | Msa0700960:intron | 50.0% | |
! | AGGCCGAGTCTTTAGAGGAA+GGG | + | chr4_4:72153729-72153748 | Msa0700960:CDS | 50.0% |
AGAGGAAGGGACTAGGCATT+TGG | + | chr4_4:72153742-72153761 | Msa0700960:CDS | 50.0% | |
GGCATCTTCCTCATCATACC+AGG | - | chr4_4:72153812-72153831 | None:intergenic | 50.0% | |
CACTGCGGATACTGAAGATG+AGG | + | chr4_4:72153904-72153923 | Msa0700960:CDS | 50.0% | |
CAAGCGCAATCAATGCAGCA+TGG | - | chr4_4:72154069-72154088 | None:intergenic | 50.0% | |
GACTACCTTTGAGCTTCCCT+CGG | - | chr4_4:72154101-72154120 | None:intergenic | 50.0% | |
AGGGAAGCTCAAAGGTAGTC+AGG | + | chr4_4:72154101-72154120 | Msa0700960:intron | 50.0% | |
ATCATCCATGGCAGCAGCTA+GGG | - | chr4_4:72154399-72154418 | None:intergenic | 50.0% | |
AATCATCCATGGCAGCAGCT+AGG | - | chr4_4:72154400-72154419 | None:intergenic | 50.0% | |
AAGGAAAGCTCACCTGTACG+CGG | - | chr4_4:72154433-72154452 | None:intergenic | 50.0% | |
CGTACAGGTGAGCTTTCCTT+TGG | + | chr4_4:72154433-72154452 | Msa0700960:intron | 50.0% | |
ACGAACCCAGCAACAAAAGC+AGG | + | chr4_4:72155135-72155154 | Msa0700960:intron | 50.0% | |
TACGCAGACAACGTCCTTGA+TGG | + | chr4_4:72155266-72155285 | Msa0700960:intron | 50.0% | |
! | ACGTCCTTGATGGTTGATCC+TGG | + | chr4_4:72155276-72155295 | Msa0700960:intron | 50.0% |
GACTCCAGGATCAACCATCA+AGG | - | chr4_4:72155283-72155302 | None:intergenic | 50.0% | |
!! | GTAGCAGCAACATTGACTCC+AGG | - | chr4_4:72155297-72155316 | None:intergenic | 50.0% |
CGATTCTTGGAATCGGGTGA+AGG | - | chr4_4:72155337-72155356 | None:intergenic | 50.0% | |
GCAAACCCAACCACAAAAGG+TGG | + | chr4_4:72155689-72155708 | Msa0700960:intron | 50.0% | |
GTCGTCGACAATGTCCTTGA+TGG | + | chr4_4:72155817-72155836 | Msa0700960:intron | 50.0% | |
GACTCCGTGATCAACCATCA+AGG | - | chr4_4:72155834-72155853 | None:intergenic | 50.0% | |
ATGTCCTTGACGGTTGCTCT+AGG | - | chr4_4:72155930-72155949 | None:intergenic | 50.0% | |
!! | GGCATCGACAATGTCCTTGA+CGG | - | chr4_4:72155940-72155959 | None:intergenic | 50.0% |
AAGGACATTGTCGATGCCCT+TGG | + | chr4_4:72155942-72155961 | Msa0700960:intron | 50.0% | |
TGCTGTCATACCGTACCTGA+AGG | + | chr4_4:72156812-72156831 | Msa0700960:CDS | 50.0% | |
! | CTTAATGGGTCAAGAGTGGG+TGG | + | chr4_4:72157027-72157046 | Msa0700960:intron | 50.0% |
GTGGAGTGTGGTTGAAGAAG+TGG | - | chr4_4:72157067-72157086 | None:intergenic | 50.0% | |
! | ATTACAGATGGTGTTGGGGG+GGG | - | chr4_4:72157476-72157495 | None:intergenic | 50.0% |
GCTAGACTCTGCAAGTGTCT+GGG | + | chr4_4:72157713-72157732 | Msa0700960:CDS | 50.0% | |
CTAGACTCTGCAAGTGTCTG+GGG | + | chr4_4:72157714-72157733 | Msa0700960:CDS | 50.0% | |
GAAGCAGACTGAAGCAATGG+TGG | - | chr4_4:72157773-72157792 | None:intergenic | 50.0% | |
! | GCAGATGTGATGGTAACGTC+AGG | - | chr4_4:72157803-72157822 | None:intergenic | 50.0% |
GATGCAGGTTGCAGGAACTT+TGG | + | chr4_4:72158392-72158411 | Msa0700960:intron | 50.0% | |
! | CAGCTTTTCTAACCTCCTCG+TGG | - | chr4_4:72158440-72158459 | None:intergenic | 50.0% |
GAAAGGGCAATCTCAAGGTC+GGG | + | chr4_4:72158622-72158641 | Msa0700960:CDS | 50.0% | |
! | CAGTATCATCCCAGCTTTGG+TGG | + | chr4_4:72158673-72158692 | Msa0700960:CDS | 50.0% |
GCAATGCTTCCACCAAAGCT+GGG | - | chr4_4:72158685-72158704 | None:intergenic | 50.0% | |
TGCAATGCTTCCACCAAAGC+TGG | - | chr4_4:72158686-72158705 | None:intergenic | 50.0% | |
GTTCGGCTCACGAGTTAACT+TGG | + | chr4_4:72159089-72159108 | Msa0700960:intron | 50.0% | |
ACAGTCTACATTAGCCCCAC+TGG | + | chr4_4:72159235-72159254 | Msa0700960:intron | 50.0% | |
! | ACAGATCTCCGGGATGCTTT+TGG | + | chr4_4:72159869-72159888 | Msa0700960:intron | 50.0% |
AGAGGGGGAGCTGATTAAAG+AGG | + | chr4_4:72160004-72160023 | Msa0700960:CDS | 50.0% | |
! | TGGCTGCTACCTTTGTTTGC+TGG | + | chr4_4:72160102-72160121 | Msa0700960:intron | 50.0% |
TTTGCTTGGCTGCTATCAGG+TGG | + | chr4_4:72160154-72160173 | Msa0700960:intron | 50.0% | |
TTGCTTGGCTGCTATCAGGT+GGG | + | chr4_4:72160155-72160174 | Msa0700960:intron | 50.0% | |
CTATCAGGTGGGCGAGATAT+TGG | + | chr4_4:72160166-72160185 | Msa0700960:intron | 50.0% | |
CTGGACGAACATACCCACAT+AGG | - | chr4_4:72160260-72160279 | None:intergenic | 50.0% | |
CTATGTGGGTATGTTCGTCC+AGG | + | chr4_4:72160258-72160277 | Msa0700960:intron | 50.0% | |
TCCAGGTTCAGGGATAGGAA+TGG | - | chr4_4:72160354-72160373 | None:intergenic | 50.0% | |
TTTCTGCAGGCAGCGGTATA+CGG | + | chr4_4:72161349-72161368 | Msa0700960:intron | 50.0% | |
CAAACTCAGCACAAACACCG+AGG | - | chr4_4:72161375-72161394 | None:intergenic | 50.0% | |
!! | CTCGGTGTTTGTGCTGAGTT+TGG | + | chr4_4:72161373-72161392 | Msa0700960:CDS | 50.0% |
CGGTGTTTGTGCTGAGTTTG+GGG | + | chr4_4:72161375-72161394 | Msa0700960:CDS | 50.0% | |
GGTGTTTGTGCTGAGTTTGG+GGG | + | chr4_4:72161376-72161395 | Msa0700960:CDS | 50.0% | |
CTTATGCAGAGGCTCTATCG+AGG | + | chr4_4:72161490-72161509 | Msa0700960:intron | 50.0% | |
GAACTACCTGCAAATGCAGC+AGG | - | chr4_4:72161801-72161820 | None:intergenic | 50.0% | |
GCTGCATTTGCAGGTAGTTC+CGG | + | chr4_4:72161801-72161820 | Msa0700960:intron | 50.0% | |
ATTTGCAGGTAGTTCCGGCA+TGG | + | chr4_4:72161806-72161825 | Msa0700960:intron | 50.0% | |
GTCGGACCTGCAGATATACA+AGG | - | chr4_4:72161967-72161986 | None:intergenic | 50.0% | |
AGAACAAACAGCTGGCCGAA+TGG | + | chr4_4:72162795-72162814 | Msa0700960:CDS | 50.0% | |
TAGCAGGCGGTAATGTTTGC+TGG | - | chr4_4:72162840-72162859 | None:intergenic | 50.0% | |
AACTGCCAACCCAGATGCTA+TGG | - | chr4_4:72162969-72162988 | None:intergenic | 50.0% | |
!! | ATAGCATCTGGGTTGGCAGT+TGG | + | chr4_4:72162968-72162987 | Msa0700960:three_prime_UTR | 50.0% |
GTGCGATTGAGTCCAAAAGG+AGG | + | chr4_4:72163172-72163191 | Msa0700960:three_prime_UTR | 50.0% | |
! | TGGGGCAATTCGTGCAGTTT+TGG | + | chr4_4:72163282-72163301 | Msa0700960:three_prime_UTR | 50.0% |
CTGGTTCCGCCGATAGAGAT+AGG | + | chr4_4:72153534-72153553 | Msa0700960:CDS | 55.0% | |
TCAAGAGGCGACTGCTCAAG+AGG | + | chr4_4:72153613-72153632 | Msa0700960:CDS | 55.0% | |
! | GAGGCCGAGTCTTTAGAGGA+AGG | + | chr4_4:72153728-72153747 | Msa0700960:CDS | 55.0% |
AGCGTGCTCCTGGTATGATG+AGG | + | chr4_4:72153801-72153820 | Msa0700960:CDS | 55.0% | |
AGTATCCGCAGTGTGCCATG+CGG | - | chr4_4:72153897-72153916 | None:intergenic | 55.0% | |
ACCTGCGTATTTGGCTGCAC+CGG | + | chr4_4:72154030-72154049 | Msa0700960:CDS | 55.0% | |
! | GCATGGCGTTTTTGCCACTC+CGG | - | chr4_4:72154052-72154071 | None:intergenic | 55.0% |
GATAGCCGAGGGAAGCTCAA+AGG | + | chr4_4:72154093-72154112 | Msa0700960:CDS | 55.0% | |
TTTCCAGAATCCCCGCGTAC+AGG | + | chr4_4:72154418-72154437 | Msa0700960:CDS | 55.0% | |
AGGAAAGCTCACCTGTACGC+GGG | - | chr4_4:72154432-72154451 | None:intergenic | 55.0% | |
GCTTCCTAGAGCAACCGTCA+AGG | + | chr4_4:72155923-72155942 | Msa0700960:intron | 55.0% | |
AGAGGGAGCCTTGACTGCTT+TGG | + | chr4_4:72156663-72156682 | Msa0700960:CDS | 55.0% | |
GGTTGGAATGGCTGTCGGAA+AGG | + | chr4_4:72156905-72156924 | Msa0700960:CDS | 55.0% | |
AGGGCTGATGCTAAGCAGGT+TGG | + | chr4_4:72156936-72156955 | Msa0700960:intron | 55.0% | |
TGCTATCACCTCCCGATCCT+TGG | + | chr4_4:72157222-72157241 | Msa0700960:intron | 55.0% | |
! | TTACAGATGGTGTTGGGGGG+GGG | - | chr4_4:72157475-72157494 | None:intergenic | 55.0% |
GGCTAGACTCTGCAAGTGTC+TGG | + | chr4_4:72157712-72157731 | Msa0700960:CDS | 55.0% | |
GTGCTGCACTTTGCCTGGAT+TGG | + | chr4_4:72158953-72158972 | Msa0700960:intron | 55.0% | |
GCCATTCCTATCCCTGAACC+TGG | + | chr4_4:72160350-72160369 | Msa0700960:intron | 55.0% | |
GAAGGTCCAGGTTCAGGGAT+AGG | - | chr4_4:72160359-72160378 | None:intergenic | 55.0% | |
GTTGCAGAGCAGTGTCGTGA+AGG | + | chr4_4:72161065-72161084 | Msa0700960:CDS | 55.0% | |
GGGCAGAGTCAATACTGTCC+TGG | - | chr4_4:72161614-72161633 | None:intergenic | 55.0% | |
!! | GGACAGTATTGACTCTGCCC+AGG | + | chr4_4:72161614-72161633 | Msa0700960:CDS | 55.0% |
GGCAGACAGTTCAACCATGC+CGG | - | chr4_4:72161823-72161842 | None:intergenic | 55.0% | |
AGGTCCGACAGCTCTCTCTT+AGG | + | chr4_4:72161978-72161997 | Msa0700960:intron | 55.0% | |
TGGGCCTAAGAGAGAGCTGT+CGG | - | chr4_4:72161985-72162004 | None:intergenic | 55.0% | |
TCCCAACTCGCGGCGATTCT+CGG | + | chr4_4:72152912-72152931 | Msa0700960:CDS | 60.0% | |
TGGACGAAAGACGAGGCCAG+AGG | - | chr4_4:72153157-72153176 | None:intergenic | 60.0% | |
TGCGGAGGCCGAGTCTTTAG+AGG | + | chr4_4:72153724-72153743 | Msa0700960:CDS | 60.0% | |
TGATCCCGCATGGCACACTG+CGG | + | chr4_4:72153889-72153908 | Msa0700960:CDS | 60.0% | |
GTATCCGCAGTGTGCCATGC+GGG | - | chr4_4:72153896-72153915 | None:intergenic | 60.0% | |
TCCGGTGCAGCCAAATACGC+AGG | - | chr4_4:72154034-72154053 | None:intergenic | 60.0% | |
CGTATTTGGCTGCACCGGAG+TGG | + | chr4_4:72154035-72154054 | Msa0700960:CDS | 60.0% | |
TGCGCTTGCTCAGATAGCCG+AGG | + | chr4_4:72154081-72154100 | Msa0700960:CDS | 60.0% | |
GCGCTTGCTCAGATAGCCGA+GGG | + | chr4_4:72154082-72154101 | Msa0700960:CDS | 60.0% | |
ATGGCTGCCCACCTTACACG+AGG | - | chr4_4:72154302-72154321 | None:intergenic | 60.0% | |
TCACCTGTACGCGGGGATTC+TGG | - | chr4_4:72154424-72154443 | None:intergenic | 60.0% | |
GGAAAGCTCACCTGTACGCG+GGG | - | chr4_4:72154431-72154450 | None:intergenic | 60.0% | |
! | TACAGATGGTGTTGGGGGGG+GGG | - | chr4_4:72157474-72157493 | None:intergenic | 60.0% |
GTGGAAGCAAGGGTAGCAGG+CGG | - | chr4_4:72162853-72162872 | None:intergenic | 60.0% | |
CAGGTGGAAGCAAGGGTAGC+AGG | - | chr4_4:72162856-72162875 | None:intergenic | 60.0% | |
CTGCTACCCTTGCTTCCACC+TGG | + | chr4_4:72162854-72162873 | Msa0700960:CDS | 60.0% | |
GCCGAGAATCGCCGCGAGTT+GGG | - | chr4_4:72152916-72152935 | None:intergenic | 65.0% | |
AGCTTGCGGGGACTGAGCCT+AGG | + | chr4_4:72153654-72153673 | Msa0700960:CDS | 65.0% | |
! | GAAGCTAGGGAGCGTGCTCC+TGG | + | chr4_4:72153791-72153810 | Msa0700960:CDS | 65.0% |
TCCATGGCAGCAGCTAGGGC+TGG | - | chr4_4:72154395-72154414 | None:intergenic | 65.0% | |
! | ACAGATGGTGTTGGGGGGGG+GGG | - | chr4_4:72157473-72157492 | None:intergenic | 65.0% |
CAGGCAGCGGTATACGGCCT+CGG | + | chr4_4:72161355-72161374 | Msa0700960:intron | 65.0% | |
CGCCGAGAATCGCCGCGAGT+TGG | - | chr4_4:72152917-72152936 | None:intergenic | 70.0% | |
GCCAGCCCTAGCTGCTGCCA+TGG | + | chr4_4:72154391-72154410 | Msa0700960:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 72152882 | 72163644 | 72152882 | ID=Msa0700960;Name=Msa0700960 |
chr4_4 | mRNA | 72152882 | 72163644 | 72152882 | ID=Msa0700960-mRNA-1;Parent=Msa0700960;Name=Msa0700960-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.82|0.79|1|0.78|0.79|24|714|1078 |
chr4_4 | exon | 72152882 | 72152996 | 72152882 | ID=Msa0700960-mRNA-1:exon:22006;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72153066 | 72153508 | 72153066 | ID=Msa0700960-mRNA-1:exon:22007;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72153527 | 72153703 | 72153527 | ID=Msa0700960-mRNA-1:exon:22008;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72153722 | 72153963 | 72153722 | ID=Msa0700960-mRNA-1:exon:22009;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72153976 | 72154114 | 72153976 | ID=Msa0700960-mRNA-1:exon:22010;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72154236 | 72154439 | 72154236 | ID=Msa0700960-mRNA-1:exon:22011;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72156420 | 72156524 | 72156420 | ID=Msa0700960-mRNA-1:exon:22012;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72156643 | 72156708 | 72156643 | ID=Msa0700960-mRNA-1:exon:22013;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72156789 | 72156953 | 72156789 | ID=Msa0700960-mRNA-1:exon:22014;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72157547 | 72157621 | 72157547 | ID=Msa0700960-mRNA-1:exon:22015;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72157707 | 72157861 | 72157707 | ID=Msa0700960-mRNA-1:exon:22016;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72158160 | 72158295 | 72158160 | ID=Msa0700960-mRNA-1:exon:22017;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72158399 | 72158468 | 72158399 | ID=Msa0700960-mRNA-1:exon:22018;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72158582 | 72158709 | 72158582 | ID=Msa0700960-mRNA-1:exon:22019;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72159032 | 72159088 | 72159032 | ID=Msa0700960-mRNA-1:exon:22020;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72159873 | 72160058 | 72159873 | ID=Msa0700960-mRNA-1:exon:22021;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72160173 | 72160265 | 72160173 | ID=Msa0700960-mRNA-1:exon:22022;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161011 | 72161096 | 72161011 | ID=Msa0700960-mRNA-1:exon:22023;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161191 | 72161257 | 72161191 | ID=Msa0700960-mRNA-1:exon:22024;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161358 | 72161424 | 72161358 | ID=Msa0700960-mRNA-1:exon:22025;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161499 | 72161635 | 72161499 | ID=Msa0700960-mRNA-1:exon:22026;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161814 | 72161905 | 72161814 | ID=Msa0700960-mRNA-1:exon:22027;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72161980 | 72162046 | 72161980 | ID=Msa0700960-mRNA-1:exon:22028;Parent=Msa0700960-mRNA-1 |
chr4_4 | exon | 72162766 | 72163644 | 72162766 | ID=Msa0700960-mRNA-1:exon:22029;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72152882 | 72152996 | 72152882 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72153066 | 72153508 | 72153066 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72153527 | 72153703 | 72153527 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72153722 | 72153963 | 72153722 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72153976 | 72154114 | 72153976 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72154236 | 72154439 | 72154236 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72156420 | 72156524 | 72156420 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72156643 | 72156708 | 72156643 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72156789 | 72156953 | 72156789 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72157547 | 72157621 | 72157547 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72157707 | 72157861 | 72157707 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72158160 | 72158295 | 72158160 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72158399 | 72158468 | 72158399 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72158582 | 72158709 | 72158582 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72159032 | 72159088 | 72159032 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72159873 | 72160058 | 72159873 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72160173 | 72160265 | 72160173 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161011 | 72161096 | 72161011 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161191 | 72161257 | 72161191 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161358 | 72161424 | 72161358 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161499 | 72161635 | 72161499 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161814 | 72161905 | 72161814 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72161980 | 72162046 | 72161980 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | CDS | 72162766 | 72162930 | 72162766 | ID=Msa0700960-mRNA-1:cds;Parent=Msa0700960-mRNA-1 |
chr4_4 | three_prime_UTR | 72162931 | 72163644 | 72162931 | ID=Msa0700960-mRNA-1:three_prime_utr;Parent=Msa0700960-mRNA-1 |
Gene Sequence |
Protein sequence |