Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429580 | XP_013462006.1 | 97.308 | 1003 | 7 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1994 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429580 | sp|Q5ZL00|EMC1_CHICK | 29.569 | 1045 | 594 | 33 | 24 | 1003 | 16 | 983 | 1.85e-117 | 387 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429580 | A0A072V2Z0 | 97.308 | 1003 | 7 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1994 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010910 | Msa1429580 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
Msa0106620 | Msa1429580 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
Msa0106710 | Msa1429580 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
Msa1365820 | Msa1429580 | 0.829447 | 5.122126e-55 | -8.615850e-47 |
Msa1368390 | Msa1429580 | 0.803197 | 3.910046e-49 | -8.615850e-47 |
Msa1382710 | Msa1429580 | 0.825207 | 5.317413e-54 | -8.615850e-47 |
Msa1429580 | Msa1461370 | 0.824723 | 6.917197e-54 | -8.615850e-47 |
Msa0626270 | Msa1429580 | 0.825803 | 3.840246e-54 | -8.615850e-47 |
Msa0626460 | Msa1429580 | 0.838258 | 3.199939e-57 | -8.615850e-47 |
Msa0664540 | Msa1429580 | 0.832755 | 7.885447e-56 | -8.615850e-47 |
Msa0693340 | Msa1429580 | -0.801124 | 1.043921e-48 | -8.615850e-47 |
Msa0698100 | Msa1429580 | 0.806478 | 8.067030e-50 | -8.615850e-47 |
Msa0700960 | Msa1429580 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
Msa0702720 | Msa1429580 | 0.812291 | 4.565845e-51 | -8.615850e-47 |
Msa0209140 | Msa1429580 | 0.802189 | 6.311575e-49 | -8.615850e-47 |
Msa1267040 | Msa1429580 | 0.809784 | 1.594323e-50 | -8.615850e-47 |
Msa1267170 | Msa1429580 | 0.808220 | 3.446991e-50 | -8.615850e-47 |
Msa1327870 | Msa1429580 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
Msa1341840 | Msa1429580 | 0.814021 | 1.904527e-51 | -8.615850e-47 |
Msa0369420 | Msa1429580 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
Msa0387140 | Msa1429580 | 0.995882 | 6.353350e-221 | -8.615850e-47 |
Msa0427700 | Msa1429580 | 0.827322 | 1.667596e-54 | -8.615850e-47 |
Msa1055200 | Msa1429580 | 0.804238 | 2.378154e-49 | -8.615850e-47 |
Msa1078660 | Msa1429580 | 0.815793 | 7.705479e-52 | -8.615850e-47 |
Msa1083700 | Msa1429580 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
Msa1089960 | Msa1429580 | 0.805243 | 1.466836e-49 | -8.615850e-47 |
Msa0304570 | Msa1429580 | 0.813354 | 2.671359e-51 | -8.615850e-47 |
Msa0332390 | Msa1429580 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
Msa0335360 | Msa1429580 | 0.808810 | 2.579592e-50 | -8.615850e-47 |
Msa1165090 | Msa1429580 | 0.808722 | 2.692774e-50 | -8.615850e-47 |
Msa1169380 | Msa1429580 | 0.810284 | 1.244024e-50 | -8.615850e-47 |
Msa1169460 | Msa1429580 | 0.803784 | 2.954706e-49 | -8.615850e-47 |
Msa0567380 | Msa1429580 | 0.809102 | 2.234041e-50 | -8.615850e-47 |
Msa0572750 | Msa1429580 | 0.827575 | 1.450162e-54 | -8.615850e-47 |
Msa0586450 | Msa1429580 | 0.846713 | 1.827409e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429580 | MtrunA17_Chr3g0139991 | 97.308 | 1003 | 7 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1994 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1429580 | AT5G11560.1 | 65.304 | 1003 | 325 | 3 | 3 | 1003 | 1 | 982 | 0.0 | 1373 |
Find 242 sgRNAs with CRISPR-Local
Find 613 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCCATCTCTTCTTGTAAT+TGG | 0.112565 | tig0026532:-27618 | Msa1429580:CDS |
GCACTTCCCTTTGCAACTTC+TGG | 0.129619 | tig0026532:-28919 | Msa1429580:CDS |
GGGTGTCTTCATGCCATTTC+TGG | 0.139632 | tig0026532:-29206 | Msa1429580:CDS |
TAAACAAACACTTGCGTTCT+TGG | 0.194711 | tig0026532:-32541 | Msa1429580:five_prime_UTR |
ATGAATACTGCTTTGTATTC+AGG | 0.210486 | tig0026532:-27281 | Msa1429580:CDS |
CACAGGATAACAAAGATATT+TGG | 0.229804 | tig0026532:-26087 | Msa1429580:intron |
AGTTGCTTTGTGAAACAAAT+AGG | 0.248566 | tig0026532:-24179 | Msa1429580:three_prime_UTR |
GCTTTGTATTCAGGGACTTA+TGG | 0.251696 | tig0026532:-27272 | Msa1429580:CDS |
CCGATTTCCCCACTGGCTTT+TGG | 0.254400 | tig0026532:+26554 | None:intergenic |
CGCCATGGCCATGGCGATTA+GGG | 0.259898 | tig0026532:-32432 | Msa1429580:exon |
TTACTCAGATTGCTCCTTCT+AGG | 0.262009 | tig0026532:-24559 | Msa1429580:CDS |
TGTAGGTATTTAGTGAAAAC+TGG | 0.270607 | tig0026532:-26345 | Msa1429580:intron |
TCTCAATATTTCCTCTTTGA+TGG | 0.271149 | tig0026532:+28491 | None:intergenic |
TTCGCCCCGTCTTCTGAGTA+TGG | 0.273204 | tig0026532:+31929 | None:intergenic |
GCAGTTTGGAGGCATGTTCT+TGG | 0.284280 | tig0026532:-31522 | Msa1429580:intron |
TGCAGGCACCAACAGTATAT+TGG | 0.286685 | tig0026532:-31973 | Msa1429580:intron |
TCAATAGCTTCAGGAGTTCT+TGG | 0.297756 | tig0026532:+27411 | None:intergenic |
GGTTTGGGAGTCTTCCCTTC+AGG | 0.301565 | tig0026532:-30573 | Msa1429580:CDS |
ATTTGTTACTTATGTATTAT+CGG | 0.302509 | tig0026532:-24462 | Msa1429580:CDS |
CACTTCCCTTTGCAACTTCT+GGG | 0.302922 | tig0026532:-28918 | Msa1429580:CDS |
AAGAAATTACGCGTCCGATA+TGG | 0.319088 | tig0026532:+24399 | None:intergenic |
TCGCCATGGCCATGGCGATT+AGG | 0.319893 | tig0026532:-32433 | Msa1429580:exon |
TACCTGACGGGCAGATGGTT+TGG | 0.325931 | tig0026532:-30589 | Msa1429580:CDS |
TGAGGTCTGAAACTTGCTTC+TGG | 0.333539 | tig0026532:+28797 | None:intergenic |
ACCTCTAAGCAGCTTCTTAT+CGG | 0.334847 | tig0026532:-25926 | Msa1429580:CDS |
TCCGATAAGAAGCTGCTTAG+AGG | 0.344251 | tig0026532:+25925 | None:intergenic |
ACCTGACGGGCAGATGGTTT+GGG | 0.349641 | tig0026532:-30588 | Msa1429580:CDS |
CCATTACATTCCTTTGTTTG+AGG | 0.357440 | tig0026532:-24273 | Msa1429580:three_prime_UTR |
CATCAGGAGACTGTATAATA+TGG | 0.362998 | tig0026532:+29034 | None:intergenic |
ATCATTAACTGCTGCTCTAA+TGG | 0.363794 | tig0026532:-27957 | Msa1429580:CDS |
GTGTAACTGCAATTAGAATA+AGG | 0.372618 | tig0026532:+24127 | None:intergenic |
CCGGGGATGGACGCATAGTT+TGG | 0.377141 | tig0026532:-27743 | Msa1429580:CDS |
GCATAGACGGTGAAGTTCTC+TGG | 0.380569 | tig0026532:-29184 | Msa1429580:CDS |
ATTTAACTAAAGAAAATGAT+TGG | 0.380915 | tig0026532:+24064 | None:intergenic |
GTTTGGGAGTCTTCCCTTCA+GGG | 0.382494 | tig0026532:-30572 | Msa1429580:CDS |
AGTAACAGTGCCTGCCAAAT+TGG | 0.383144 | tig0026532:-24624 | Msa1429580:CDS |
TGCTGTTCCGATTTCCCCAC+TGG | 0.385316 | tig0026532:+26547 | None:intergenic |
GGAAAGATCTAGAAGAGAAA+TGG | 0.389058 | tig0026532:-24436 | Msa1429580:CDS |
AGGCTGCTGTATTGTCGATT+TGG | 0.394539 | tig0026532:+28650 | None:intergenic |
TGTAAATTGAGGATTGAGAT+AGG | 0.396341 | tig0026532:-24224 | Msa1429580:three_prime_UTR |
CCTGATGTGATTTATGTAGC+TGG | 0.397420 | tig0026532:-29018 | Msa1429580:CDS |
CAGCTTCTTATCGGAACAAT+TGG | 0.398831 | tig0026532:-25917 | Msa1429580:CDS |
CCAAAAGCCAGTGGGGAAAT+CGG | 0.402007 | tig0026532:-26554 | Msa1429580:CDS |
ATCCATCTCTTCTTGTAATT+GGG | 0.402204 | tig0026532:-27617 | Msa1429580:CDS |
AACAGTCCTGGAAGCTTTGA+TGG | 0.403066 | tig0026532:+28742 | None:intergenic |
GAACCTCTTCGAATGGCTTA+AGG | 0.405315 | tig0026532:-28266 | Msa1429580:intron |
TGATAAATGTTAAGCCCAAC+TGG | 0.408225 | tig0026532:+27675 | None:intergenic |
CTGTAAAGGATGTTAATGAT+TGG | 0.408833 | tig0026532:-28549 | Msa1429580:CDS |
GAGGGATGTAGACTCCAATT+TGG | 0.409191 | tig0026532:+24610 | None:intergenic |
GCAGGCACCAACAGTATATT+GGG | 0.409945 | tig0026532:-31972 | Msa1429580:intron |
TTCAGAATCTCAATAGCTTC+AGG | 0.410731 | tig0026532:+27402 | None:intergenic |
TTAATTAAAGTTACAAATGA+AGG | 0.411447 | tig0026532:-28691 | Msa1429580:CDS |
CATGACCCACCACGGTTGCC+AGG | 0.412068 | tig0026532:-26459 | Msa1429580:CDS |
TGTTCAGTTGAATCAGTATA+AGG | 0.412583 | tig0026532:+27480 | None:intergenic |
TTCCTTTGTTTGAGGCTGAA+TGG | 0.413184 | tig0026532:-24265 | Msa1429580:three_prime_UTR |
TTCAACAAGGAGAAATTGTC+TGG | 0.414197 | tig0026532:-28381 | Msa1429580:CDS |
ACTGATAATGGTGTTATTAG+AGG | 0.418692 | tig0026532:-27342 | Msa1429580:CDS |
TAACTTTAATTAAGAGAACT+TGG | 0.420091 | tig0026532:+28701 | None:intergenic |
TATCGGAACAATTGGTGATC+AGG | 0.426179 | tig0026532:-25909 | Msa1429580:intron |
TCCCAAACCATCTGCCCGTC+AGG | 0.426869 | tig0026532:+30587 | None:intergenic |
ATATTACCATCAAAGCTTCC+AGG | 0.429030 | tig0026532:-28748 | Msa1429580:CDS |
GATTGGTTAAAGAGAGGAAA+AGG | 0.437129 | tig0026532:+32393 | None:intergenic |
GTTGCTTTGTGAAACAAATA+GGG | 0.437576 | tig0026532:-24178 | Msa1429580:three_prime_UTR |
TACTCGGTTGAGACTGATAA+TGG | 0.442224 | tig0026532:-27354 | Msa1429580:CDS |
GTAAAGAGAAGAAGCGAGAT+TGG | 0.443952 | tig0026532:+32376 | None:intergenic |
GATATTAATGTTGTAAATTG+AGG | 0.444793 | tig0026532:-24235 | Msa1429580:three_prime_UTR |
AACACCAGAGGAGGCAACTT+TGG | 0.447248 | tig0026532:-26525 | Msa1429580:CDS |
CGAAGATCAAGTTGGTCTCA+TGG | 0.448704 | tig0026532:-32354 | Msa1429580:CDS |
TCATGGGTTCAGAGCATTGA+TGG | 0.450368 | tig0026532:-28431 | Msa1429580:CDS |
CAATAGCTTCAGGAGTTCTT+GGG | 0.452351 | tig0026532:+27412 | None:intergenic |
GATATTTGGAAGTTTGTACT+TGG | 0.455264 | tig0026532:-26073 | Msa1429580:CDS |
GGCACCAATGATGTTGTTGA+TGG | 0.456758 | tig0026532:-31501 | Msa1429580:CDS |
AGCAGTTGAAGTCACTTCAA+TGG | 0.456893 | tig0026532:+25958 | None:intergenic |
TGAATACTGCTTTGTATTCA+GGG | 0.457304 | tig0026532:-27280 | Msa1429580:CDS |
GTCATCACCCTTTCCTCTGA+TGG | 0.458294 | tig0026532:-30635 | Msa1429580:CDS |
GACCTCATCAAGGATTCATC+TGG | 0.464150 | tig0026532:-28781 | Msa1429580:CDS |
ACATCCCTCGTCTTTGCCTA+TGG | 0.465598 | tig0026532:-24596 | Msa1429580:CDS |
ATAACCAAAGTTGCCTCCTC+TGG | 0.467336 | tig0026532:+26521 | None:intergenic |
TCTTCTTTCTCAGCTTGTGA+GGG | 0.470188 | tig0026532:+25716 | None:intergenic |
AAAATGACTCGTGATCATAA+TGG | 0.472672 | tig0026532:-27822 | Msa1429580:CDS |
GTCAGAACTACCTGTGGAAA+AGG | 0.473051 | tig0026532:-28317 | Msa1429580:CDS |
TGAAGGTGAGTTGGTGGCGC+TGG | 0.474644 | tig0026532:-28674 | Msa1429580:CDS |
AGTGAATCGTAAGTCCTAGA+AGG | 0.475966 | tig0026532:+24545 | None:intergenic |
TTCACTACCGATCATTTCTC+AGG | 0.480117 | tig0026532:-25672 | Msa1429580:intron |
TAAAATTCAGCTCTCTGTAA+AGG | 0.484414 | tig0026532:-28563 | Msa1429580:CDS |
ACACATTCGCTAAAAGTAGA+AGG | 0.484558 | tig0026532:-24659 | Msa1429580:CDS |
CAAAAGCTTACAGCATGAAC+AGG | 0.485245 | tig0026532:+26434 | None:intergenic |
AGGTGATAAGTTTGTGGTGT+TGG | 0.485329 | tig0026532:-28878 | Msa1429580:CDS |
TTTGTTTGAGGCTGAATGGA+GGG | 0.485486 | tig0026532:-24261 | Msa1429580:three_prime_UTR |
TTTGCTTTGCATACCGGGGA+TGG | 0.485539 | tig0026532:-27756 | Msa1429580:CDS |
TGCTTTGCTGAAGGAAAACT+TGG | 0.490579 | tig0026532:-28521 | Msa1429580:CDS |
GCTTAACATTTATCAGTGGC+AGG | 0.492266 | tig0026532:-27667 | Msa1429580:CDS |
TTCACCGTCTATGCCAGAAA+TGG | 0.492390 | tig0026532:+29193 | None:intergenic |
AATCCCATCAACAACATCAT+TGG | 0.493058 | tig0026532:+31497 | None:intergenic |
CTTATAGTACTTACAAGGGC+AGG | 0.493287 | tig0026532:-27786 | Msa1429580:CDS |
GGGGAATCATTATCAGTCTC+AGG | 0.493338 | tig0026532:-28898 | Msa1429580:CDS |
GTCAGAACAGATAGATCTCA+TGG | 0.496977 | tig0026532:-28448 | Msa1429580:CDS |
AGATGATCTGTCTTCCATAT+CGG | 0.498451 | tig0026532:-24413 | Msa1429580:exon |
TGAAGTGACTTCAACTGCTA+AGG | 0.499221 | tig0026532:-25954 | Msa1429580:CDS |
AGTTGCTTATAGTACTTACA+AGG | 0.500412 | tig0026532:-27791 | Msa1429580:CDS |
AACCCTAATCGCCATGGCCA+TGG | 0.501028 | tig0026532:+32430 | None:intergenic |
CCTCAAACAAAGGAATGTAA+TGG | 0.501249 | tig0026532:+24273 | None:intergenic |
AAATAGCTATTCAAAAGCTT+AGG | 0.505306 | tig0026532:-27866 | Msa1429580:CDS |
AGAGTGAATGTGTGAGTGAT+GGG | 0.505984 | tig0026532:+32472 | None:intergenic |
TTCTTCTTTCTCAGCTTGTG+AGG | 0.507689 | tig0026532:+25715 | None:intergenic |
TATACTTCCATCAGAGGAAA+GGG | 0.508495 | tig0026532:+30628 | None:intergenic |
TCACCTTCCCAATATACTGT+TGG | 0.508929 | tig0026532:+31965 | None:intergenic |
AGTTACAAATGAAGGTGAGT+TGG | 0.509444 | tig0026532:-28683 | Msa1429580:CDS |
TTGATTCCTTTGATCCCTGA+AGG | 0.511496 | tig0026532:+30558 | None:intergenic |
TCGAGGTCTATGACCAGTCT+CGG | 0.512629 | tig0026532:-26270 | Msa1429580:CDS |
TGGTCGGTAATAAGAAGAGA+TGG | 0.512641 | tig0026532:+26030 | None:intergenic |
CATCAAGGATTCATCTGGAC+AGG | 0.512869 | tig0026532:-28776 | Msa1429580:CDS |
ATGAAGTGAATGCAAAGAGC+GGG | 0.513421 | tig0026532:-28966 | Msa1429580:CDS |
CGCCCAATTACAAGAAGAGA+TGG | 0.517391 | tig0026532:+27615 | None:intergenic |
GCTGACATACCGCCCGAGAC+TGG | 0.517521 | tig0026532:+26257 | None:intergenic |
GATGGGATTGACATTGCCCT+TGG | 0.518319 | tig0026532:-31483 | Msa1429580:CDS |
ATCAAGTTGGTCTCATGGAT+TGG | 0.519349 | tig0026532:-32349 | Msa1429580:intron |
CAGATCCATCGCCATGGCCA+TGG | 0.519382 | tig0026532:-32441 | Msa1429580:exon |
CATGCCATTTCTGGCATAGA+CGG | 0.521747 | tig0026532:-29197 | Msa1429580:CDS |
GTGTTCCATACTCAGAAGAC+GGG | 0.522168 | tig0026532:-31934 | Msa1429580:CDS |
TTGTGGTGTTGGATGATGTA+AGG | 0.522985 | tig0026532:-28867 | Msa1429580:CDS |
CTCCATTCAGCCTCAAACAA+AGG | 0.523314 | tig0026532:+24263 | None:intergenic |
GAGCCCTGAGATTAAAATAG+TGG | 0.524090 | tig0026532:+26314 | None:intergenic |
GTTCAGAGCATTGATGGTAA+TGG | 0.526198 | tig0026532:-28425 | Msa1429580:CDS |
CCAGCTACATAAATCACATC+AGG | 0.526361 | tig0026532:+29018 | None:intergenic |
GATGTAGACTCCAATTTGGC+AGG | 0.527479 | tig0026532:+24614 | None:intergenic |
AGTCTCAGGTGATAAGTTTG+TGG | 0.529071 | tig0026532:-28884 | Msa1429580:CDS |
AATCGCCATGGCCATGGCGA+TGG | 0.529506 | tig0026532:+32436 | None:intergenic |
AGTACTTACAAGGGCAGGAA+AGG | 0.530738 | tig0026532:-27781 | Msa1429580:CDS |
TATATCATTGATACTGTGAC+TGG | 0.532794 | tig0026532:-26497 | Msa1429580:CDS |
ATCGGTAGTGAATCAGTAAG+AGG | 0.536980 | tig0026532:+25683 | None:intergenic |
AGGATTGTGAACATCCAGTT+GGG | 0.537160 | tig0026532:-27689 | Msa1429580:CDS |
CCAAACTATGCGTCCATCCC+CGG | 0.537428 | tig0026532:+27743 | None:intergenic |
TGAGGGATTGAGAGTCCGAC+GGG | 0.540387 | tig0026532:+25733 | None:intergenic |
GTCTTCCCTTCAGGGATCAA+AGG | 0.544092 | tig0026532:-30564 | Msa1429580:CDS |
TCTCTTTACGAAGATCAAGT+TGG | 0.545894 | tig0026532:-32362 | Msa1429580:CDS |
TTCAAATATATACTGGTACT+CGG | 0.546769 | tig0026532:-27370 | Msa1429580:CDS |
AAGCGAGATTGGTTAAAGAG+AGG | 0.551732 | tig0026532:+32387 | None:intergenic |
TACAAATGAAGGTGAGTTGG+TGG | 0.553549 | tig0026532:-28680 | Msa1429580:CDS |
TTGTTTGAGGCTGAATGGAG+GGG | 0.554686 | tig0026532:-24260 | Msa1429580:three_prime_UTR |
CAATGCTCTGTCAATTTCAG+AGG | 0.556372 | tig0026532:-28623 | Msa1429580:CDS |
GAGGATTGTGAACATCCAGT+TGG | 0.560024 | tig0026532:-27690 | Msa1429580:CDS |
GTATACTTCCATCAGAGGAA+AGG | 0.560313 | tig0026532:+30627 | None:intergenic |
GCACCAATGATGTTGTTGAT+GGG | 0.562200 | tig0026532:-31500 | Msa1429580:CDS |
ATGACCCACCACGGTTGCCA+GGG | 0.562846 | tig0026532:-26458 | Msa1429580:CDS |
TCACAAGCTGAGAAAGAAGA+AGG | 0.563073 | tig0026532:-25713 | Msa1429580:CDS |
CTATTCAAAAGCTTAGGTTG+AGG | 0.563691 | tig0026532:-27860 | Msa1429580:CDS |
AAGAGTGAATGTGTGAGTGA+TGG | 0.565004 | tig0026532:+32471 | None:intergenic |
AACTTTAATTAAGAGAACTT+GGG | 0.565474 | tig0026532:+28702 | None:intergenic |
ATTGTAATCTTCGAGTTCCA+CGG | 0.565685 | tig0026532:+32496 | None:intergenic |
AGGACCCTGGCAACCGTGGT+GGG | 0.566124 | tig0026532:+26454 | None:intergenic |
GTTGAATCAGTATAAGGCAG+TGG | 0.566656 | tig0026532:+27486 | None:intergenic |
TCATACTTTGCGTAAATCAG+AGG | 0.568075 | tig0026532:-27709 | Msa1429580:CDS |
ACAGTTGGCGCAGTCACACT+TGG | 0.569345 | tig0026532:+27585 | None:intergenic |
GAACTTACCTGACGGGCAGA+TGG | 0.569560 | tig0026532:-30594 | Msa1429580:CDS |
CTTCTTGTAATTGGGCGATG+TGG | 0.570637 | tig0026532:-27609 | Msa1429580:CDS |
TTTGAGGCTGAATGGAGGGG+AGG | 0.571948 | tig0026532:-24257 | Msa1429580:three_prime_UTR |
GAAGTGACTTCAACTGCTAA+GGG | 0.572594 | tig0026532:-25953 | Msa1429580:CDS |
ATTGTCTTCATATTGAACAA+AGG | 0.574065 | tig0026532:+28585 | None:intergenic |
TCAAGAAAAGAAATAACAGT+TGG | 0.575622 | tig0026532:+27570 | None:intergenic |
CTTTGTTTGAGGCTGAATGG+AGG | 0.576197 | tig0026532:-24262 | Msa1429580:three_prime_UTR |
CGGAACAGCAACACCAGAGG+AGG | 0.576554 | tig0026532:-26534 | Msa1429580:CDS |
GGTTCCACATCATCATGCAC+TGG | 0.578057 | tig0026532:-27646 | Msa1429580:CDS |
AGCTACAACATTCTCTTCAG+TGG | 0.579214 | tig0026532:+31891 | None:intergenic |
GCAAGTTTCAGACCTCATCA+AGG | 0.579316 | tig0026532:-28791 | Msa1429580:CDS |
TTACAGCATGAACAGGACCC+TGG | 0.580099 | tig0026532:+26441 | None:intergenic |
ATGGAAGTATACTGAGAGCA+TGG | 0.580158 | tig0026532:-30616 | Msa1429580:CDS |
ATATTTGGAAGTTTGTACTT+GGG | 0.580879 | tig0026532:-26072 | Msa1429580:CDS |
ATGGTCAATTGTATTCCCAT+CGG | 0.582081 | tig0026532:-27253 | Msa1429580:CDS |
GTAGGTATTTAGTGAAAACT+GGG | 0.582984 | tig0026532:-26344 | Msa1429580:intron |
TAATGGTGGAACTTTCATGA+AGG | 0.584263 | tig0026532:-27940 | Msa1429580:CDS |
GATTCCCCAGAAGTTGCAAA+GGG | 0.590687 | tig0026532:+28913 | None:intergenic |
TCTTGATGCATACACAGGGA+AGG | 0.590779 | tig0026532:-27553 | Msa1429580:CDS |
TACAAATCTCTCCATGGCGA+AGG | 0.591785 | tig0026532:+31860 | None:intergenic |
AATTGACAGAGCATTGCTAA+AGG | 0.592188 | tig0026532:+28630 | None:intergenic |
TGATTCCCCAGAAGTTGCAA+AGG | 0.592939 | tig0026532:+28912 | None:intergenic |
GAGCATGGAACTTACCTGAC+GGG | 0.593894 | tig0026532:-30601 | Msa1429580:CDS |
GGAGAAACACGTACTTCAGA+AGG | 0.594698 | tig0026532:-24203 | Msa1429580:three_prime_UTR |
CGAGGTCTATGACCAGTCTC+GGG | 0.594730 | tig0026532:-26269 | Msa1429580:CDS |
TGATTCCTTTGATCCCTGAA+GGG | 0.594748 | tig0026532:+30559 | None:intergenic |
TAGAACAGAACCTCTTCGAA+TGG | 0.599301 | tig0026532:-28273 | Msa1429580:CDS |
CAGGACCCTGGCAACCGTGG+TGG | 0.599458 | tig0026532:+26453 | None:intergenic |
ACTTCCCTTTGCAACTTCTG+GGG | 0.600142 | tig0026532:-28917 | Msa1429580:CDS |
GAACAGGACCCTGGCAACCG+TGG | 0.601108 | tig0026532:+26450 | None:intergenic |
GGACATTTGCTGAAACTCAA+AGG | 0.601815 | tig0026532:-27918 | Msa1429580:CDS |
ATGCAGCACCAAAAGCCAGT+GGG | 0.601937 | tig0026532:-26562 | Msa1429580:CDS |
ATTAACTGCTGCTCTAATGG+TGG | 0.601937 | tig0026532:-27954 | Msa1429580:CDS |
GTGAGGGATTGAGAGTCCGA+CGG | 0.602706 | tig0026532:+25732 | None:intergenic |
CAATTGCATTCATGAAGTAG+TGG | 0.603523 | tig0026532:-27304 | Msa1429580:CDS |
AATGGTGGAACTTTCATGAA+GGG | 0.603560 | tig0026532:-27939 | Msa1429580:CDS |
CTTTGTGAAACAAATAGGGT+AGG | 0.603615 | tig0026532:-24174 | Msa1429580:three_prime_UTR |
TGTGTTCCATACTCAGAAGA+CGG | 0.604040 | tig0026532:-31935 | Msa1429580:CDS |
TTACTTATGTATTATCGGAG+AGG | 0.607601 | tig0026532:-24457 | Msa1429580:CDS |
GCTTCACTCGACCTTCGCCA+TGG | 0.608681 | tig0026532:-31871 | Msa1429580:CDS |
CAGAGCATTGATGGTAATGG+AGG | 0.610246 | tig0026532:-28422 | Msa1429580:CDS |
TTGGAATGGTGCTTTGCTGA+AGG | 0.619847 | tig0026532:-28530 | Msa1429580:CDS |
GGTCGGTAATAAGAAGAGAT+GGG | 0.622823 | tig0026532:+26031 | None:intergenic |
TCATCCAGTGCATGATGATG+TGG | 0.623705 | tig0026532:+27642 | None:intergenic |
GAATAACTCGAGCAACGGTG+TGG | 0.623885 | tig0026532:+27508 | None:intergenic |
AATAACTCGAGCAACGGTGT+GGG | 0.627835 | tig0026532:+27509 | None:intergenic |
GTCCAGATGAATCCTTGATG+AGG | 0.628352 | tig0026532:+28779 | None:intergenic |
AAGGATGTTAATGATTGGAA+TGG | 0.628565 | tig0026532:-28544 | Msa1429580:CDS |
AAATATACCTGAGAAATGAT+CGG | 0.629270 | tig0026532:+25665 | None:intergenic |
AGTTACAAGAAAATCAAATG+AGG | 0.629308 | tig0026532:-27208 | Msa1429580:intron |
TAGCCATACAAATCTCTCCA+TGG | 0.631175 | tig0026532:+31854 | None:intergenic |
TTGGTAATTGACCATCAAAG+AGG | 0.631517 | tig0026532:-28502 | Msa1429580:CDS |
TCTCTTCAGATCCATCGCCA+TGG | 0.638117 | tig0026532:-32447 | Msa1429580:exon |
CTACTCCATAGGCAAAGACG+AGG | 0.640064 | tig0026532:+24591 | None:intergenic |
GAACTACCTGTGGAAAAGGA+AGG | 0.640801 | tig0026532:-28313 | Msa1429580:CDS |
CAGTGGAATAACTCGAGCAA+CGG | 0.643016 | tig0026532:+27503 | None:intergenic |
AATGCAGCACCAAAAGCCAG+TGG | 0.643369 | tig0026532:-26563 | Msa1429580:CDS |
AGAGCATGGAACTTACCTGA+CGG | 0.645707 | tig0026532:-30602 | Msa1429580:CDS |
AGAAATTGTCTGGAGTAGAG+AGG | 0.650623 | tig0026532:-28371 | Msa1429580:CDS |
TCTCAGTATACTTCCATCAG+AGG | 0.653634 | tig0026532:+30622 | None:intergenic |
GCACCAACAGTATATTGGGA+AGG | 0.654684 | tig0026532:-31968 | Msa1429580:CDS |
TTGGGCTTAACATTTATCAG+TGG | 0.657781 | tig0026532:-27671 | Msa1429580:CDS |
GTAACAATAGACATCAACAA+TGG | 0.658123 | tig0026532:-28835 | Msa1429580:CDS |
ATACCTTAAGCCATTCGAAG+AGG | 0.658715 | tig0026532:+28263 | None:intergenic |
TCAGAACAGATAGATCTCAT+GGG | 0.661453 | tig0026532:-28447 | Msa1429580:CDS |
AACAACGTCAGAACTACCTG+TGG | 0.662479 | tig0026532:-28323 | Msa1429580:CDS |
TCACTTCTATTAGTTCAACA+AGG | 0.662525 | tig0026532:-28394 | Msa1429580:CDS |
TCTAATGATCGCAAGCGCTG+AGG | 0.665196 | tig0026532:-27892 | Msa1429580:CDS |
TGCAGCACCAAAAGCCAGTG+GGG | 0.666440 | tig0026532:-26561 | Msa1429580:CDS |
AATCGGAACAGCAACACCAG+AGG | 0.670400 | tig0026532:-26537 | Msa1429580:CDS |
ATTGTCTGGAGTAGAGAGGA+CGG | 0.670770 | tig0026532:-28367 | Msa1429580:CDS |
CGTTGTTACATCAATAACTG+AGG | 0.681812 | tig0026532:+28339 | None:intergenic |
TGAAGTGAATGCAAAGAGCG+GGG | 0.683707 | tig0026532:-28965 | Msa1429580:CDS |
TTGCATCGCATGACCCACCA+CGG | 0.684916 | tig0026532:-26467 | Msa1429580:CDS |
GTTGCTTATAGTACTTACAA+GGG | 0.685667 | tig0026532:-27790 | Msa1429580:CDS |
ACACGTTTACAACCATGAGG+TGG | 0.686512 | tig0026532:-24108 | Msa1429580:three_prime_UTR |
TCAGCTTCGATCTTCCTCCG+TGG | 0.686685 | tig0026532:-32513 | Msa1429580:five_prime_UTR |
TAGACGGTGAAGTTCTCTGG+AGG | 0.686865 | tig0026532:-29181 | Msa1429580:CDS |
ACATGAGATGTCAGTCATCG+AGG | 0.688383 | tig0026532:-26287 | Msa1429580:CDS |
GGTCTATGACCAGTCTCGGG+CGG | 0.695398 | tig0026532:-26266 | Msa1429580:intron |
TATGAAGTGAATGCAAAGAG+CGG | 0.702657 | tig0026532:-28967 | Msa1429580:CDS |
TACTCCATAGGCAAAGACGA+GGG | 0.709340 | tig0026532:+24592 | None:intergenic |
GTTACACGTTTACAACCATG+AGG | 0.723303 | tig0026532:-24111 | Msa1429580:three_prime_UTR |
TATACTTGTACATGACATCG+TGG | 0.726568 | tig0026532:+26612 | None:intergenic |
GAGGGATTGAGAGTCCGACG+GGG | 0.735305 | tig0026532:+25734 | None:intergenic |
TGTTCCATACTCAGAAGACG+GGG | 0.735564 | tig0026532:-31933 | Msa1429580:CDS |
CTAAAAGTAGAAGGTCTGCG+AGG | 0.753852 | tig0026532:-24650 | Msa1429580:CDS |
GTAATCTTCGAGTTCCACGG+AGG | 0.767367 | tig0026532:+32499 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTAAAAAAAAAATTT+GGG | + | tig0026532:26517-26536 | None:intergenic | 0.0% |
!!! | AATATTTTAAAAAAAAAATT+TGG | + | tig0026532:26518-26537 | None:intergenic | 0.0% |
!! | AAAAATTAAAAATTACACTT+TGG | + | tig0026532:26657-26676 | None:intergenic | 10.0% |
!! | ATGCAAAAAAAAAAAATTAT+GGG | + | tig0026532:26711-26730 | None:intergenic | 10.0% |
!!! | ATTTTTAAGAGTATTATAAA+AGG | - | tig0026532:26923-26942 | Msa1429580:intron | 10.0% |
!!! | ATTTTATTGAAATTTTTCAT+TGG | - | tig0026532:27160-27179 | Msa1429580:intron | 10.0% |
!! | TAAGATATAAAAAAAATCAA+TGG | + | tig0026532:27565-27584 | None:intergenic | 10.0% |
!!! | ACTAATATTTTTAAAACATA+AGG | + | tig0026532:29538-29557 | None:intergenic | 10.0% |
!!! | TTATTCATAATTTTTTTCAA+AGG | - | tig0026532:31467-31486 | Msa1429580:intron | 10.0% |
!!! | TTTATTTTTGGATGAAAATT+AGG | + | tig0026532:24083-24102 | None:intergenic | 15.0% |
!!! | AGTGTTTGTTTATTTATTTT+TGG | + | tig0026532:24095-24114 | None:intergenic | 15.0% |
!! | AATTTCTCTTATATTTAGTT+CGG | + | tig0026532:24858-24877 | None:intergenic | 15.0% |
!! | AACTAAATATAAGAGAAATT+TGG | - | tig0026532:24858-24877 | Msa1429580:intron | 15.0% |
!! | ACTAAATATAAGAGAAATTT+GGG | - | tig0026532:24859-24878 | Msa1429580:intron | 15.0% |
!! | ATAAAAAATATATCGACATT+GGG | - | tig0026532:25301-25320 | Msa1429580:intron | 15.0% |
!!! | CTTTTGAAAATATATTTGTT+TGG | - | tig0026532:25416-25435 | Msa1429580:intron | 15.0% |
!!! | CACATATATTTGTTATATTT+TGG | + | tig0026532:25483-25502 | None:intergenic | 15.0% |
!! | AAGAAAAAAAAAAAACTTAC+TGG | + | tig0026532:26129-26148 | None:intergenic | 15.0% |
!! | TATGTATATAACAAAAGATA+TGG | + | tig0026532:26160-26179 | None:intergenic | 15.0% |
!! | GATGCAAAAAAAAAAAATTA+TGG | + | tig0026532:26712-26731 | None:intergenic | 15.0% |
!! | TTAATTAAAGTTACAAATGA+AGG | - | tig0026532:27953-27972 | Msa1429580:CDS | 15.0% |
!!! | TTAGAATTATGATTTTTATG+TGG | - | tig0026532:28662-28681 | Msa1429580:CDS | 15.0% |
!! | AAGAGAATAATAATTTAGAA+AGG | + | tig0026532:29967-29986 | None:intergenic | 15.0% |
!!! | TTTTTGCTTGTATTAAATTA+AGG | + | tig0026532:31018-31037 | None:intergenic | 15.0% |
!! | TTTATTCTTTAGATATTTAG+CGG | - | tig0026532:31237-31256 | Msa1429580:intron | 15.0% |
!!! | ATTTGTTACTTATGTATTAT+CGG | - | tig0026532:32182-32201 | Msa1429580:intron | 15.0% |
!! | ATTTAACTAAAGAAAATGAT+TGG | + | tig0026532:32583-32602 | None:intergenic | 15.0% |
!! | AATTAAAACAAATGGAATTG+TGG | + | tig0026532:24345-24364 | None:intergenic | 20.0% |
!! | AAGGGAATAATTAAAACAAA+TGG | + | tig0026532:24353-24372 | None:intergenic | 20.0% |
!!! | TTCAATCTGTTTTTATGATT+TGG | - | tig0026532:24605-24624 | Msa1429580:CDS | 20.0% |
!! | CCTAAATATAACAGAAATTT+GGG | + | tig0026532:24914-24933 | None:intergenic | 20.0% |
!! | TCCTAAATATAACAGAAATT+TGG | + | tig0026532:24915-24934 | None:intergenic | 20.0% |
!! | CATAAAAAATATATCGACAT+TGG | - | tig0026532:25300-25319 | Msa1429580:intron | 20.0% |
!! | GAAACAATAACTGATATAAA+AGG | - | tig0026532:26234-26253 | Msa1429580:intron | 20.0% |
!! | TCATCTTAATGCATATATTA+AGG | + | tig0026532:26400-26419 | None:intergenic | 20.0% |
!! | ATATTCAAGACACTAAATAA+TGG | - | tig0026532:26533-26552 | Msa1429580:CDS | 20.0% |
!! | ATTAAAAATTACACTTTGGT+GGG | + | tig0026532:26653-26672 | None:intergenic | 20.0% |
!! | AATTAAAAATTACACTTTGG+TGG | + | tig0026532:26654-26673 | None:intergenic | 20.0% |
!!! | GACTTGTGTAATTTTTTTTT+CGG | - | tig0026532:26684-26703 | Msa1429580:intron | 20.0% |
!!! | ACTTGTGTAATTTTTTTTTC+GGG | - | tig0026532:26685-26704 | Msa1429580:intron | 20.0% |
!!! | TTAAGAGTATTATAAAAGGA+TGG | - | tig0026532:26927-26946 | Msa1429580:intron | 20.0% |
!! | TCAATAAAATAAAGACCTTA+AGG | + | tig0026532:27150-27169 | None:intergenic | 20.0% |
!! | AAATACAACAAAATAAACCA+AGG | + | tig0026532:27328-27347 | None:intergenic | 20.0% |
!! | TAAAAACTGCAATTAATTAC+AGG | + | tig0026532:27360-27379 | None:intergenic | 20.0% |
!! | AACTTTAATTAAGAGAACTT+GGG | + | tig0026532:27945-27964 | None:intergenic | 20.0% |
!! | TAACTTTAATTAAGAGAACT+TGG | + | tig0026532:27946-27965 | None:intergenic | 20.0% |
!!! | AAATTAAGTTTTTAGTCTTG+AGG | - | tig0026532:29686-29705 | Msa1429580:intron | 20.0% |
!! | GAATAATAATTTAGAAAGGA+AGG | + | tig0026532:29963-29982 | None:intergenic | 20.0% |
!! | TAAGATGTATTATATGAATC+TGG | - | tig0026532:30250-30269 | Msa1429580:intron | 20.0% |
!!! | AATTTCTTTTGAGATAATGA+AGG | + | tig0026532:31046-31065 | None:intergenic | 20.0% |
!! | AATAAATATGAAATTGCTTC+TGG | - | tig0026532:31122-31141 | Msa1429580:intron | 20.0% |
!! | GCTAAATATCTAAAGAATAA+AGG | + | tig0026532:31238-31257 | None:intergenic | 20.0% |
!!! | AGTAATAGTTCAGTTTTTTT+TGG | + | tig0026532:31359-31378 | None:intergenic | 20.0% |
!!! | TAAGTTTTGAACTATTAAGT+AGG | - | tig0026532:32267-32286 | Msa1429580:intron | 20.0% |
!! | GATATTAATGTTGTAAATTG+AGG | - | tig0026532:32409-32428 | Msa1429580:CDS | 20.0% |
!! | TTTTTGGATGAAAATTAGGT+TGG | + | tig0026532:24079-24098 | None:intergenic | 25.0% |
! | AAATCAATGAAAATAGATCG+AGG | + | tig0026532:24397-24416 | None:intergenic | 25.0% |
!! | TGAGGATAATCAATTTTACA+CGG | - | tig0026532:24508-24527 | Msa1429580:CDS | 25.0% |
! | GATTTGGAAGTTATAATTGA+TGG | - | tig0026532:24621-24640 | Msa1429580:CDS | 25.0% |
!!! | ATGGATTGTGATTATGTTTT+TGG | - | tig0026532:24640-24659 | Msa1429580:CDS | 25.0% |
!! | ATATAACAGAAATTTGGGTT+TGG | + | tig0026532:24909-24928 | None:intergenic | 25.0% |
! | CCCAAATTTCTGTTATATTT+AGG | - | tig0026532:24911-24930 | Msa1429580:intron | 25.0% |
!!! | TAATAGTCTTGAATCGTTTT+CGG | - | tig0026532:24996-25015 | Msa1429580:intron | 25.0% |
!!! | GTTGTTTGTTTTCTTTTGTT+TGG | - | tig0026532:25065-25084 | Msa1429580:intron | 25.0% |
! | AAAAGATACCAAACAGAAAA+AGG | + | tig0026532:25205-25224 | None:intergenic | 25.0% |
! | TACCAAAAAAGGAATAGAAA+GGG | + | tig0026532:25367-25386 | None:intergenic | 25.0% |
! | TATTGTCCAAAAATCTCATT+TGG | - | tig0026532:25736-25755 | Msa1429580:CDS | 25.0% |
! | ATATACATATGAATGTGATG+TGG | - | tig0026532:26171-26190 | Msa1429580:intron | 25.0% |
! | AAAGTAAGAAGATTACGAAA+AGG | - | tig0026532:26207-26226 | Msa1429580:intron | 25.0% |
! | TCTTAATGCATATATTAAGG+AGG | + | tig0026532:26397-26416 | None:intergenic | 25.0% |
! | CATCCCTTATAAAACTAAAA+CGG | - | tig0026532:26728-26747 | Msa1429580:intron | 25.0% |
! | ATCCCTTATAAAACTAAAAC+GGG | - | tig0026532:26729-26748 | Msa1429580:intron | 25.0% |
! | CAAAATGACTCTCTTAAATA+AGG | + | tig0026532:26869-26888 | None:intergenic | 25.0% |
!!! | GATGATTTGATACTTGTTTT+TGG | - | tig0026532:27411-27430 | Msa1429580:CDS | 25.0% |
!!! | TTGATACTTGTTTTTGGTAA+AGG | - | tig0026532:27417-27436 | Msa1429580:CDS | 25.0% |
!!! | TGATACTTGTTTTTGGTAAA+GGG | - | tig0026532:27418-27437 | Msa1429580:CDS | 25.0% |
! | TCGCTTAAGAAAAAAATATC+AGG | + | tig0026532:27535-27554 | None:intergenic | 25.0% |
! | ATTGTCTTCATATTGAACAA+AGG | + | tig0026532:28062-28081 | None:intergenic | 25.0% |
! | GATCATATAATTATGTTGTG+TGG | + | tig0026532:28521-28540 | None:intergenic | 25.0% |
! | AAATAGCTATTCAAAAGCTT+AGG | - | tig0026532:28778-28797 | Msa1429580:CDS | 25.0% |
! | TCAAGAAAAGAAATAACAGT+TGG | + | tig0026532:29077-29096 | None:intergenic | 25.0% |
!! | GTGAGTTTTCAAATATATAC+TGG | - | tig0026532:29267-29286 | Msa1429580:intron | 25.0% |
! | TTCAAATATATACTGGTACT+CGG | - | tig0026532:29274-29293 | Msa1429580:intron | 25.0% |
! | AGTTACAAGAAAATCAAATG+AGG | - | tig0026532:29436-29455 | Msa1429580:intron | 25.0% |
! | ATTAAAAACCTCAAAACCAA+AGG | + | tig0026532:29469-29488 | None:intergenic | 25.0% |
!!! | AAAGAAAAGTATTTCGAGTA+AGG | + | tig0026532:29586-29605 | None:intergenic | 25.0% |
! | ATATACAATTCAAACGACTT+CGG | + | tig0026532:29817-29836 | None:intergenic | 25.0% |
!!! | TATTCTCTTTTGTTTCATCT+AGG | - | tig0026532:29978-29997 | Msa1429580:intron | 25.0% |
! | AATACATCTTAAGAATGAGA+AGG | + | tig0026532:30241-30260 | None:intergenic | 25.0% |
! | TCAAATAACAATACACAAGT+TGG | + | tig0026532:30412-30431 | None:intergenic | 25.0% |
! | GTTCATTCTAATGTGATATA+TGG | - | tig0026532:30521-30540 | Msa1429580:intron | 25.0% |
! | ATATTTGGAAGTTTGTACTT+GGG | - | tig0026532:30572-30591 | Msa1429580:CDS | 25.0% |
!!! | CTGTTGTTTTCTCATTTAAT+TGG | - | tig0026532:30814-30833 | Msa1429580:intron | 25.0% |
! | AAATATACCTGAGAAATGAT+CGG | + | tig0026532:30982-31001 | None:intergenic | 25.0% |
!!! | GAAATTTGTTGAGTCTTTAA+AGG | - | tig0026532:31060-31079 | Msa1429580:intron | 25.0% |
! | AAAGAATTATCTACTGATGA+AGG | - | tig0026532:31205-31224 | Msa1429580:intron | 25.0% |
! | AAGAATTATCTACTGATGAA+GGG | - | tig0026532:31206-31225 | Msa1429580:intron | 25.0% |
! | ATTCATTACTGTCTAACATA+TGG | + | tig0026532:31695-31714 | None:intergenic | 25.0% |
! | CTAGTAATTGGAAAATGATA+AGG | - | tig0026532:31752-31771 | Msa1429580:intron | 25.0% |
!! | ATAAACATTTGAAACCAACT+TGG | - | tig0026532:31885-31904 | Msa1429580:CDS | 25.0% |
! | AAAAAATAGATCTACTCCAT+AGG | + | tig0026532:32067-32086 | None:intergenic | 25.0% |
! | GAAAATAGATCGAGGTTTTA+AGG | + | tig0026532:24389-24408 | None:intergenic | 30.0% |
!!! | CGGTTTTTTTTTAATCGTTG+AGG | - | tig0026532:24490-24509 | Msa1429580:CDS | 30.0% |
GAAAACGATTCAAGACTATT+AGG | + | tig0026532:24997-25016 | None:intergenic | 30.0% | |
! | AGACATCATACATTTTCCAA+GGG | + | tig0026532:25180-25199 | None:intergenic | 30.0% |
! | TAGACATCATACATTTTCCA+AGG | + | tig0026532:25181-25200 | None:intergenic | 30.0% |
! | ATGTCTAACCTTTTTCTGTT+TGG | - | tig0026532:25194-25213 | Msa1429580:intron | 30.0% |
! | GGATGTGACATTAATTTTCA+GGG | - | tig0026532:25322-25341 | Msa1429580:intron | 30.0% |
!!! | ATCCCTTTCTATTCCTTTTT+TGG | - | tig0026532:25362-25381 | Msa1429580:intron | 30.0% |
GTACCAAAAAAGGAATAGAA+AGG | + | tig0026532:25368-25387 | None:intergenic | 30.0% | |
ACTAAACTGAGTACCAAAAA+AGG | + | tig0026532:25378-25397 | None:intergenic | 30.0% | |
! | AGATAGCCAAATGAGATTTT+TGG | + | tig0026532:25745-25764 | None:intergenic | 30.0% |
TGCTCTCTTTAATACTTTGT+TGG | - | tig0026532:25898-25917 | Msa1429580:intron | 30.0% | |
TTATGTTCGAGAGAATTAGA+AGG | + | tig0026532:26364-26383 | None:intergenic | 30.0% | |
TCCCTTATAAAACTAAAACG+GGG | - | tig0026532:26730-26749 | Msa1429580:intron | 30.0% | |
ATGACTCTCTTAAATAAGGT+GGG | + | tig0026532:26865-26884 | None:intergenic | 30.0% | |
AATGACTCTCTTAAATAAGG+TGG | + | tig0026532:26866-26885 | None:intergenic | 30.0% | |
ATACCAAATCCCCATAATAT+GGG | + | tig0026532:27012-27031 | None:intergenic | 30.0% | |
AATACCAAATCCCCATAATA+TGG | + | tig0026532:27013-27032 | None:intergenic | 30.0% | |
!! | AACCAACCCATTTTCTAAAA+TGG | - | tig0026532:27197-27216 | Msa1429580:intron | 30.0% |
!!! | ACCAACCCATTTTCTAAAAT+GGG | - | tig0026532:27198-27217 | Msa1429580:intron | 30.0% |
!! | GTTAGCCCATTTTAGAAAAT+GGG | + | tig0026532:27206-27225 | None:intergenic | 30.0% |
TGCAATTAATTACAGGTGTA+CGG | + | tig0026532:27353-27372 | None:intergenic | 30.0% | |
GAAAAATTTGAAAGCTGACA+AGG | - | tig0026532:27389-27408 | Msa1429580:CDS | 30.0% | |
!!! | ATTTATGTAGCTGGTTTTGT+TGG | - | tig0026532:27635-27654 | Msa1429580:CDS | 30.0% |
GTAACAATAGACATCAACAA+TGG | - | tig0026532:27809-27828 | Msa1429580:CDS | 30.0% | |
! | ATTTTTAATGCAAACAGTCC+TGG | + | tig0026532:27917-27936 | None:intergenic | 30.0% |
TAAAATTCAGCTCTCTGTAA+AGG | - | tig0026532:28081-28100 | Msa1429580:intron | 30.0% | |
CTGTAAAGGATGTTAATGAT+TGG | - | tig0026532:28095-28114 | Msa1429580:intron | 30.0% | |
AAGGATGTTAATGATTGGAA+TGG | - | tig0026532:28100-28119 | Msa1429580:intron | 30.0% | |
TCTCAATATTTCCTCTTTGA+TGG | + | tig0026532:28156-28175 | None:intergenic | 30.0% | |
TCACTTCTATTAGTTCAACA+AGG | - | tig0026532:28250-28269 | Msa1429580:intron | 30.0% | |
GTCCTTGTTAAACATATCAA+GGG | + | tig0026532:28408-28427 | None:intergenic | 30.0% | |
TGTCCTTGTTAAACATATCA+AGG | + | tig0026532:28409-28428 | None:intergenic | 30.0% | |
ACTGTTAGTGTATGTTTATG+TGG | - | tig0026532:28568-28587 | Msa1429580:CDS | 30.0% | |
!! | ACATATAGAGAAGTATCAAG+CGG | + | tig0026532:28621-28640 | None:intergenic | 30.0% |
AAAATGACTCGTGATCATAA+TGG | - | tig0026532:28822-28841 | Msa1429580:CDS | 30.0% | |
AGTTGCTTATAGTACTTACA+AGG | - | tig0026532:28853-28872 | Msa1429580:CDS | 30.0% | |
GTTGCTTATAGTACTTACAA+GGG | - | tig0026532:28854-28873 | Msa1429580:CDS | 30.0% | |
AATCCATCTCTTCTTGTAAT+TGG | - | tig0026532:29026-29045 | Msa1429580:CDS | 30.0% | |
ATCCATCTCTTCTTGTAATT+GGG | - | tig0026532:29027-29046 | Msa1429580:CDS | 30.0% | |
TGTTCAGTTGAATCAGTATA+AGG | + | tig0026532:29167-29186 | None:intergenic | 30.0% | |
!! | ACTGATAATGGTGTTATTAG+AGG | - | tig0026532:29302-29321 | Msa1429580:intron | 30.0% |
ATGAATACTGCTTTGTATTC+AGG | - | tig0026532:29363-29382 | Msa1429580:intron | 30.0% | |
TGAATACTGCTTTGTATTCA+GGG | - | tig0026532:29364-29383 | Msa1429580:intron | 30.0% | |
! | TAATCTTTTCTGATTCCGAT+GGG | + | tig0026532:29409-29428 | None:intergenic | 30.0% |
! | ATAATCTTTTCTGATTCCGA+TGG | + | tig0026532:29410-29429 | None:intergenic | 30.0% |
CAAGAAAATCAAATGAGGTA+TGG | - | tig0026532:29441-29460 | Msa1429580:intron | 30.0% | |
CATGTTTATATACCTCAGAT+GGG | + | tig0026532:29563-29582 | None:intergenic | 30.0% | |
!!! | TGATTTTTTTTCCGAGTAAG+AGG | - | tig0026532:29709-29728 | Msa1429580:intron | 30.0% |
TATATCATTGATACTGTGAC+TGG | - | tig0026532:30147-30166 | Msa1429580:intron | 30.0% | |
!! | CGCATGAATATTATTTCTGT+AGG | - | tig0026532:30282-30301 | Msa1429580:intron | 30.0% |
TGTAGGTATTTAGTGAAAAC+TGG | - | tig0026532:30299-30318 | Msa1429580:intron | 30.0% | |
GTAGGTATTTAGTGAAAACT+GGG | - | tig0026532:30300-30319 | Msa1429580:intron | 30.0% | |
!!! | TCTACCACTATTTTAATCTC+AGG | - | tig0026532:30326-30345 | Msa1429580:intron | 30.0% |
!!! | CTACCACTATTTTAATCTCA+GGG | - | tig0026532:30327-30346 | Msa1429580:intron | 30.0% |
!!! | GCTGCTAATCTTTTTTTACA+TGG | - | tig0026532:30458-30477 | Msa1429580:intron | 30.0% |
ACAACACAAGAAATAATGAC+TGG | + | tig0026532:30497-30516 | None:intergenic | 30.0% | |
ATTCTAATGTGATATATGGC+TGG | - | tig0026532:30525-30544 | Msa1429580:intron | 30.0% | |
CACAGGATAACAAAGATATT+TGG | - | tig0026532:30557-30576 | Msa1429580:CDS | 30.0% | |
GATATTTGGAAGTTTGTACT+TGG | - | tig0026532:30571-30590 | Msa1429580:CDS | 30.0% | |
TTGATCTCAAGTATTCATGT+GGG | + | tig0026532:30784-30803 | None:intergenic | 30.0% | |
TTTGATCTCAAGTATTCATG+TGG | + | tig0026532:30785-30804 | None:intergenic | 30.0% | |
!!! | TGTTTTTTTTTGTTTGCTGC+AGG | - | tig0026532:30858-30877 | Msa1429580:intron | 30.0% |
! | ATATATTGCTGGCTATAACT+TGG | + | tig0026532:31279-31298 | None:intergenic | 30.0% |
TAGCCAGCAATATATATCTA+AGG | - | tig0026532:31284-31303 | Msa1429580:intron | 30.0% | |
AGCCAGCAATATATATCTAA+GGG | - | tig0026532:31285-31304 | Msa1429580:intron | 30.0% | |
AGCAATATATATCTAAGGGT+GGG | - | tig0026532:31289-31308 | Msa1429580:intron | 30.0% | |
AGGTATCACTAATAACAGTT+CGG | - | tig0026532:31487-31506 | Msa1429580:CDS | 30.0% | |
ATTTAGCAAACAGTTCAGTT+TGG | - | tig0026532:31544-31563 | Msa1429580:intron | 30.0% | |
!! | TACTAGTTCTCATAATGGAT+AGG | + | tig0026532:31738-31757 | None:intergenic | 30.0% |
! | CCAATTACTAGTTCTCATAA+TGG | + | tig0026532:31743-31762 | None:intergenic | 30.0% |
CCATTATGAGAACTAGTAAT+TGG | - | tig0026532:31740-31759 | Msa1429580:intron | 30.0% | |
GTAATTGGAAAATGATAAGG+AGG | - | tig0026532:31755-31774 | Msa1429580:intron | 30.0% | |
! | TTTTAGCGAATGTGTGATAT+AGG | + | tig0026532:31980-31999 | None:intergenic | 30.0% |
TTACTTATGTATTATCGGAG+AGG | - | tig0026532:32187-32206 | Msa1429580:intron | 30.0% | |
TGTAAATTGAGGATTGAGAT+AGG | - | tig0026532:32420-32439 | Msa1429580:CDS | 30.0% | |
! | AGTTGCTTTGTGAAACAAAT+AGG | - | tig0026532:32465-32484 | Msa1429580:five_prime_UTR | 30.0% |
! | GTTGCTTTGTGAAACAAATA+GGG | - | tig0026532:32466-32485 | Msa1429580:five_prime_UTR | 30.0% |
GTGTAACTGCAATTAGAATA+AGG | + | tig0026532:32520-32539 | None:intergenic | 30.0% | |
TAAACAAACACTTGCGTTCT+TGG | - | tig0026532:24103-24122 | Msa1429580:three_prime_UTR | 35.0% | |
! | ATTGTAATCTTCGAGTTCCA+CGG | + | tig0026532:24151-24170 | None:intergenic | 35.0% |
! | GATTGGTTAAAGAGAGGAAA+AGG | + | tig0026532:24254-24273 | None:intergenic | 35.0% |
TCTCTTTACGAAGATCAAGT+TGG | - | tig0026532:24282-24301 | Msa1429580:three_prime_UTR | 35.0% | |
TGGAATTGTGGTGTGAATAA+GGG | + | tig0026532:24333-24352 | None:intergenic | 35.0% | |
ATGGAATTGTGGTGTGAATA+AGG | + | tig0026532:24334-24353 | None:intergenic | 35.0% | |
TAAGGCGATGATTACAACAA+GGG | + | tig0026532:24371-24390 | None:intergenic | 35.0% | |
TTAAGGCGATGATTACAACA+AGG | + | tig0026532:24372-24391 | None:intergenic | 35.0% | |
AGACCTTAACTGATGTTGAT+CGG | - | tig0026532:24470-24489 | Msa1429580:CDS | 35.0% | |
AAACCGATCAACATCAGTTA+AGG | + | tig0026532:24476-24495 | None:intergenic | 35.0% | |
!!! | GTTGTTTTTGATACTGCCAT+AGG | - | tig0026532:24939-24958 | Msa1429580:intron | 35.0% |
TTTGATACTGCCATAGGTTA+TGG | - | tig0026532:24945-24964 | Msa1429580:intron | 35.0% | |
CAATGGTTATTGCTTGGAAA+AGG | + | tig0026532:25033-25052 | None:intergenic | 35.0% | |
! | CTTTTCCAAGCAATAACCAT+TGG | - | tig0026532:25031-25050 | Msa1429580:intron | 35.0% |
AACAACCAATGGTTATTGCT+TGG | + | tig0026532:25039-25058 | None:intergenic | 35.0% | |
ACAACTAAGCAAACAACCAA+TGG | + | tig0026532:25050-25069 | None:intergenic | 35.0% | |
!! | TGTTTTTGTTGCTTGCAGTT+TGG | - | tig0026532:25108-25127 | Msa1429580:intron | 35.0% |
AATCCCATCAACAACATCAT+TGG | + | tig0026532:25150-25169 | None:intergenic | 35.0% | |
! | GGGATGTGACATTAATTTTC+AGG | - | tig0026532:25321-25340 | Msa1429580:intron | 35.0% |
ACAGGAAGACTGTATTTATG+AGG | + | tig0026532:25514-25533 | None:intergenic | 35.0% | |
AGGTTGCAAATGAAGATGTT+GGG | - | tig0026532:25564-25583 | Msa1429580:intron | 35.0% | |
! | GGGTTGTAGATCTAAAACTT+TGG | - | tig0026532:25585-25604 | Msa1429580:intron | 35.0% |
TATACTTCCATCAGAGGAAA+GGG | + | tig0026532:26019-26038 | None:intergenic | 35.0% | |
GATGAATGCCAAAGCAAATA+AGG | - | tig0026532:26415-26434 | Msa1429580:intron | 35.0% | |
AAATTTGGGCCCCAAAAAAT+TGG | + | tig0026532:26503-26522 | None:intergenic | 35.0% | |
!!! | GCCCCGTTTTAGTTTTATAA+GGG | + | tig0026532:26734-26753 | None:intergenic | 35.0% |
!! | GGCCTATGAATTTGTTAAGA+CGG | - | tig0026532:26751-26770 | Msa1429580:intron | 35.0% |
AGCAAAGTCACCCATAATAT+GGG | + | tig0026532:26788-26807 | None:intergenic | 35.0% | |
TAGCAAAGTCACCCATAATA+TGG | + | tig0026532:26789-26808 | None:intergenic | 35.0% | |
TATTGCAGAAAGCTTTCTGA+GGG | + | tig0026532:26978-26997 | None:intergenic | 35.0% | |
ATATTGCAGAAAGCTTTCTG+AGG | + | tig0026532:26979-26998 | None:intergenic | 35.0% | |
AAATAAACCCCCATTCAAGT+TGG | - | tig0026532:27041-27060 | Msa1429580:intron | 35.0% | |
! | AATAAACCCCCATTCAAGTT+GGG | - | tig0026532:27042-27061 | Msa1429580:intron | 35.0% |
AAAGGGAAAAGAGAAAGAGA+AGG | + | tig0026532:27075-27094 | None:intergenic | 35.0% | |
!! | GGTTAGCCCATTTTAGAAAA+TGG | + | tig0026532:27207-27226 | None:intergenic | 35.0% |
! | AGTGAGAGGTATGACAAATT+TGG | - | tig0026532:27498-27517 | Msa1429580:CDS | 35.0% |
! | GTGAGAGGTATGACAAATTT+GGG | - | tig0026532:27499-27518 | Msa1429580:CDS | 35.0% |
! | TGAGAGGTATGACAAATTTG+GGG | - | tig0026532:27500-27519 | Msa1429580:CDS | 35.0% |
CATCAGGAGACTGTATAATA+TGG | + | tig0026532:27613-27632 | None:intergenic | 35.0% | |
TATGAAGTGAATGCAAAGAG+CGG | - | tig0026532:27677-27696 | Msa1429580:CDS | 35.0% | |
ATATTACCATCAAAGCTTCC+AGG | - | tig0026532:27896-27915 | Msa1429580:CDS | 35.0% | |
AGTTACAAATGAAGGTGAGT+TGG | - | tig0026532:27961-27980 | Msa1429580:CDS | 35.0% | |
!! | AATTGACAGAGCATTGCTAA+AGG | + | tig0026532:28017-28036 | None:intergenic | 35.0% |
! | TTGGTAATTGACCATCAAAG+AGG | - | tig0026532:28142-28161 | Msa1429580:intron | 35.0% |
TCAGAACAGATAGATCTCAT+GGG | - | tig0026532:28197-28216 | Msa1429580:intron | 35.0% | |
TTCAACAAGGAGAAATTGTC+TGG | - | tig0026532:28263-28282 | Msa1429580:intron | 35.0% | |
CGTTGTTACATCAATAACTG+AGG | + | tig0026532:28308-28327 | None:intergenic | 35.0% | |
TGCCCTTGATATGTTTAACA+AGG | - | tig0026532:28403-28422 | Msa1429580:CDS | 35.0% | |
ATCATTAACTGCTGCTCTAA+TGG | - | tig0026532:28687-28706 | Msa1429580:CDS | 35.0% | |
! | TAATGGTGGAACTTTCATGA+AGG | - | tig0026532:28704-28723 | Msa1429580:CDS | 35.0% |
! | AATGGTGGAACTTTCATGAA+GGG | - | tig0026532:28705-28724 | Msa1429580:CDS | 35.0% |
! | CTATTCAAAAGCTTAGGTTG+AGG | - | tig0026532:28784-28803 | Msa1429580:CDS | 35.0% |
! | AAGGTTTTTGCTTTGCATAC+CGG | - | tig0026532:28882-28901 | Msa1429580:CDS | 35.0% |
TCATACTTTGCGTAAATCAG+AGG | - | tig0026532:28935-28954 | Msa1429580:CDS | 35.0% | |
TGATAAATGTTAAGCCCAAC+TGG | + | tig0026532:28972-28991 | None:intergenic | 35.0% | |
TTGGGCTTAACATTTATCAG+TGG | - | tig0026532:28973-28992 | Msa1429580:CDS | 35.0% | |
! | TCTTTTCTTGATGCATACAC+AGG | - | tig0026532:29086-29105 | Msa1429580:intron | 35.0% |
! | CTTTTCTTGATGCATACACA+GGG | - | tig0026532:29087-29106 | Msa1429580:intron | 35.0% |
TTCAGAATCTCAATAGCTTC+AGG | + | tig0026532:29245-29264 | None:intergenic | 35.0% | |
CAATTGCATTCATGAAGTAG+TGG | - | tig0026532:29340-29359 | Msa1429580:intron | 35.0% | |
ATGGTCAATTGTATTCCCAT+CGG | - | tig0026532:29391-29410 | Msa1429580:intron | 35.0% | |
! | AAATATTAGTCTCCCATCTG+AGG | - | tig0026532:29548-29567 | Msa1429580:intron | 35.0% |
GCATGTTTATATACCTCAGA+TGG | + | tig0026532:29564-29583 | None:intergenic | 35.0% | |
CAATCAAATCACCTCTTACT+CGG | + | tig0026532:29723-29742 | None:intergenic | 35.0% | |
! | TTTGGGAGCATAACAAAACT+TGG | + | tig0026532:29774-29793 | None:intergenic | 35.0% |
AACGACTTCGGAAAAACTAA+AGG | + | tig0026532:29805-29824 | None:intergenic | 35.0% | |
TATACTTGTACATGACATCG+TGG | + | tig0026532:30035-30054 | None:intergenic | 35.0% | |
ATGGCTGGAATATATTTCAC+AGG | - | tig0026532:30540-30559 | Msa1429580:CDS | 35.0% | |
!!! | ATTTTGCTGAGATTTCTGGT+CGG | + | tig0026532:30633-30652 | None:intergenic | 35.0% |
! | TGTGATTTTGCTGAGATTTC+TGG | + | tig0026532:30637-30656 | None:intergenic | 35.0% |
!! | TTTTTGTTTGCTGCAGGTTT+TGG | - | tig0026532:30864-30883 | Msa1429580:intron | 35.0% |
! | GGCACTTGATAAACGATTTT+TGG | - | tig0026532:30885-30904 | Msa1429580:intron | 35.0% |
ATATGAAATTGCTTCTGGTC+AGG | - | tig0026532:31127-31146 | Msa1429580:intron | 35.0% | |
TATGAAATTGCTTCTGGTCA+GGG | - | tig0026532:31128-31147 | Msa1429580:intron | 35.0% | |
CACCCTTAGATATATATTGC+TGG | + | tig0026532:31290-31309 | None:intergenic | 35.0% | |
CAGCAATATATATCTAAGGG+TGG | - | tig0026532:31288-31307 | Msa1429580:intron | 35.0% | |
TAAAGTTCAGCAGTTCAGTT+CGG | + | tig0026532:31331-31350 | None:intergenic | 35.0% | |
TGAACTGAAACAGTTCAGTT+CGG | - | tig0026532:31393-31412 | Msa1429580:intron | 35.0% | |
TTGGAAAATGATAAGGAGGA+TGG | - | tig0026532:31759-31778 | Msa1429580:intron | 35.0% | |
ACACATTCGCTAAAAGTAGA+AGG | - | tig0026532:31985-32004 | Msa1429580:intron | 35.0% | |
GGAAAGATCTAGAAGAGAAA+TGG | - | tig0026532:32208-32227 | Msa1429580:intron | 35.0% | |
AGATGATCTGTCTTCCATAT+CGG | - | tig0026532:32231-32250 | Msa1429580:intron | 35.0% | |
CCTCAAACAAAGGAATGTAA+TGG | + | tig0026532:32374-32393 | None:intergenic | 35.0% | |
! | CCATTACATTCCTTTGTTTG+AGG | - | tig0026532:32371-32390 | Msa1429580:CDS | 35.0% |
CTTTGTGAAACAAATAGGGT+AGG | - | tig0026532:32470-32489 | Msa1429580:five_prime_UTR | 35.0% | |
AGAGTGAATGTGTGAGTGAT+GGG | + | tig0026532:24175-24194 | None:intergenic | 40.0% | |
AAGAGTGAATGTGTGAGTGA+TGG | + | tig0026532:24176-24195 | None:intergenic | 40.0% | |
! | AAGCGAGATTGGTTAAAGAG+AGG | + | tig0026532:24260-24279 | None:intergenic | 40.0% |
GTAAAGAGAAGAAGCGAGAT+TGG | + | tig0026532:24271-24290 | None:intergenic | 40.0% | |
!! | ATCAAGTTGGTCTCATGGAT+TGG | - | tig0026532:24295-24314 | Msa1429580:three_prime_UTR | 40.0% |
TCACCTTCCCAATATACTGT+TGG | + | tig0026532:24682-24701 | None:intergenic | 40.0% | |
TGTGTTCCATACTCAGAAGA+CGG | - | tig0026532:24709-24728 | Msa1429580:intron | 40.0% | |
AGCTACAACATTCTCTTCAG+TGG | + | tig0026532:24756-24775 | None:intergenic | 40.0% | |
TAGCCATACAAATCTCTCCA+TGG | + | tig0026532:24793-24812 | None:intergenic | 40.0% | |
CCATCATAAGCCATAACCTA+TGG | + | tig0026532:24958-24977 | None:intergenic | 40.0% | |
CCATAGGTTATGGCTTATGA+TGG | - | tig0026532:24955-24974 | Msa1429580:intron | 40.0% | |
!! | TTTTGTTGCTTGCAGTTTGG+AGG | - | tig0026532:25111-25130 | Msa1429580:intron | 40.0% |
GCACCAATGATGTTGTTGAT+GGG | - | tig0026532:25144-25163 | Msa1429580:intron | 40.0% | |
AAAGGAATAGAAAGGGATCG+TGG | + | tig0026532:25360-25379 | None:intergenic | 40.0% | |
TCTGTTGCAATTCTCATACG+AGG | - | tig0026532:25544-25563 | Msa1429580:intron | 40.0% | |
GAGGTTGCAAATGAAGATGT+TGG | - | tig0026532:25563-25582 | Msa1429580:intron | 40.0% | |
GGTTGCAAATGAAGATGTTG+GGG | - | tig0026532:25565-25584 | Msa1429580:intron | 40.0% | |
GGACAATAGACACTTGAAAG+TGG | + | tig0026532:25724-25743 | None:intergenic | 40.0% | |
GTATACTTCCATCAGAGGAA+AGG | + | tig0026532:26020-26039 | None:intergenic | 40.0% | |
TCTCAGTATACTTCCATCAG+AGG | + | tig0026532:26025-26044 | None:intergenic | 40.0% | |
! | ATGGAAGTATACTGAGAGCA+TGG | - | tig0026532:26028-26047 | Msa1429580:CDS | 40.0% |
TGATTCCTTTGATCCCTGAA+GGG | + | tig0026532:26088-26107 | None:intergenic | 40.0% | |
TTGATTCCTTTGATCCCTGA+AGG | + | tig0026532:26089-26108 | None:intergenic | 40.0% | |
! | ATGTGTCCTTTTCACAGCTT+TGG | + | tig0026532:26271-26290 | None:intergenic | 40.0% |
TACATAAAGTGAGCATCCTC+TGG | - | tig0026532:26290-26309 | Msa1429580:CDS | 40.0% | |
! | TCATGGCACCTTATTTGCTT+TGG | + | tig0026532:26426-26445 | None:intergenic | 40.0% |
! | GGTAACTTTTGGTGAATGAG+AGG | - | tig0026532:26613-26632 | Msa1429580:CDS | 40.0% |
!!! | GGCCCCGTTTTAGTTTTATA+AGG | + | tig0026532:26735-26754 | None:intergenic | 40.0% |
GGCCGTCTTAACAAATTCAT+AGG | + | tig0026532:26756-26775 | None:intergenic | 40.0% | |
! | TTATGGGTGACTTTGCTATG+TGG | - | tig0026532:26791-26810 | Msa1429580:intron | 40.0% |
! | TATGGGTGACTTTGCTATGT+GGG | - | tig0026532:26792-26811 | Msa1429580:intron | 40.0% |
TATCGAGCTCACCCATATTA+TGG | - | tig0026532:26998-27017 | Msa1429580:intron | 40.0% | |
ATCGAGCTCACCCATATTAT+GGG | - | tig0026532:26999-27018 | Msa1429580:intron | 40.0% | |
TCACCCATATTATGGGGATT+TGG | - | tig0026532:27006-27025 | Msa1429580:intron | 40.0% | |
AATGTCTCCCAACTTGAATG+GGG | + | tig0026532:27052-27071 | None:intergenic | 40.0% | |
GAATGTCTCCCAACTTGAAT+GGG | + | tig0026532:27053-27072 | None:intergenic | 40.0% | |
!! | GCCCATTTTAGAAAATGGGT+TGG | + | tig0026532:27202-27221 | None:intergenic | 40.0% |
TCAGTGCAGGTTCATAAAGA+TGG | + | tig0026532:27286-27305 | None:intergenic | 40.0% | |
! | GGAAAGATTTTGCTAGTGAG+AGG | - | tig0026532:27484-27503 | Msa1429580:CDS | 40.0% |
! | AGGTATGACAAATTTGGGGT+TGG | - | tig0026532:27504-27523 | Msa1429580:CDS | 40.0% |
CCAGCTACATAAATCACATC+AGG | + | tig0026532:27629-27648 | None:intergenic | 40.0% | |
CCTGATGTGATTTATGTAGC+TGG | - | tig0026532:27626-27645 | Msa1429580:CDS | 40.0% | |
ATGAAGTGAATGCAAAGAGC+GGG | - | tig0026532:27678-27697 | Msa1429580:CDS | 40.0% | |
AGTCTCAGGTGATAAGTTTG+TGG | - | tig0026532:27760-27779 | Msa1429580:CDS | 40.0% | |
AGGTGATAAGTTTGTGGTGT+TGG | - | tig0026532:27766-27785 | Msa1429580:CDS | 40.0% | |
! | TTGTGGTGTTGGATGATGTA+AGG | - | tig0026532:27777-27796 | Msa1429580:CDS | 40.0% |
! | TACAAATGAAGGTGAGTTGG+TGG | - | tig0026532:27964-27983 | Msa1429580:CDS | 40.0% |
CAATGCTCTGTCAATTTCAG+AGG | - | tig0026532:28021-28040 | Msa1429580:intron | 40.0% | |
TGCTTTGCTGAAGGAAAACT+TGG | - | tig0026532:28123-28142 | Msa1429580:intron | 40.0% | |
GTCAGAACAGATAGATCTCA+TGG | - | tig0026532:28196-28215 | Msa1429580:intron | 40.0% | |
!! | GTTCAGAGCATTGATGGTAA+TGG | - | tig0026532:28219-28238 | Msa1429580:intron | 40.0% |
! | AGAAATTGTCTGGAGTAGAG+AGG | - | tig0026532:28273-28292 | Msa1429580:CDS | 40.0% |
TAGAACAGAACCTCTTCGAA+TGG | - | tig0026532:28371-28390 | Msa1429580:CDS | 40.0% | |
ATACCTTAAGCCATTCGAAG+AGG | + | tig0026532:28384-28403 | None:intergenic | 40.0% | |
ATTAACTGCTGCTCTAATGG+TGG | - | tig0026532:28690-28709 | Msa1429580:CDS | 40.0% | |
! | GGACATTTGCTGAAACTCAA+AGG | - | tig0026532:28726-28745 | Msa1429580:CDS | 40.0% |
CTTATAGTACTTACAAGGGC+AGG | - | tig0026532:28858-28877 | Msa1429580:CDS | 40.0% | |
! | AGGTTTTTGCTTTGCATACC+GGG | - | tig0026532:28883-28902 | Msa1429580:CDS | 40.0% |
AGGATTGTGAACATCCAGTT+GGG | - | tig0026532:28955-28974 | Msa1429580:CDS | 40.0% | |
GCTTAACATTTATCAGTGGC+AGG | - | tig0026532:28977-28996 | Msa1429580:CDS | 40.0% | |
GTTGAATCAGTATAAGGCAG+TGG | + | tig0026532:29161-29180 | None:intergenic | 40.0% | |
CAATAGCTTCAGGAGTTCTT+GGG | + | tig0026532:29235-29254 | None:intergenic | 40.0% | |
TCAATAGCTTCAGGAGTTCT+TGG | + | tig0026532:29236-29255 | None:intergenic | 40.0% | |
TACTCGGTTGAGACTGATAA+TGG | - | tig0026532:29290-29309 | Msa1429580:intron | 40.0% | |
GCTTTGTATTCAGGGACTTA+TGG | - | tig0026532:29372-29391 | Msa1429580:intron | 40.0% | |
CGAGTAAGAGGTGATTTGAT+TGG | - | tig0026532:29721-29740 | Msa1429580:intron | 40.0% | |
!! | AACTAAAGGCACGCTGATTT+GGG | + | tig0026532:29791-29810 | None:intergenic | 40.0% |
! | AAACTAAAGGCACGCTGATT+TGG | + | tig0026532:29792-29811 | None:intergenic | 40.0% |
ACTCTCTTTCATCGAGTCTT+TGG | - | tig0026532:29923-29942 | Msa1429580:intron | 40.0% | |
CAAAAGCTTACAGCATGAAC+AGG | + | tig0026532:30213-30232 | None:intergenic | 40.0% | |
GAGCCCTGAGATTAAAATAG+TGG | + | tig0026532:30333-30352 | None:intergenic | 40.0% | |
GGTCGGTAATAAGAAGAGAT+GGG | + | tig0026532:30616-30635 | None:intergenic | 40.0% | |
TGGTCGGTAATAAGAAGAGA+TGG | + | tig0026532:30617-30636 | None:intergenic | 40.0% | |
AGCAGTTGAAGTCACTTCAA+TGG | + | tig0026532:30689-30708 | None:intergenic | 40.0% | |
TGAAGTGACTTCAACTGCTA+AGG | - | tig0026532:30690-30709 | Msa1429580:intron | 40.0% | |
GAAGTGACTTCAACTGCTAA+GGG | - | tig0026532:30691-30710 | Msa1429580:intron | 40.0% | |
ACCTCTAAGCAGCTTCTTAT+CGG | - | tig0026532:30718-30737 | Msa1429580:intron | 40.0% | |
CAGCTTCTTATCGGAACAAT+TGG | - | tig0026532:30727-30746 | Msa1429580:intron | 40.0% | |
! | TATCGGAACAATTGGTGATC+AGG | - | tig0026532:30735-30754 | Msa1429580:intron | 40.0% |
TCTTCTTTCTCAGCTTGTGA+GGG | + | tig0026532:30931-30950 | None:intergenic | 40.0% | |
TTCTTCTTTCTCAGCTTGTG+AGG | + | tig0026532:30932-30951 | None:intergenic | 40.0% | |
TCACAAGCTGAGAAAGAAGA+AGG | - | tig0026532:30931-30950 | Msa1429580:intron | 40.0% | |
ATCGGTAGTGAATCAGTAAG+AGG | + | tig0026532:30964-30983 | None:intergenic | 40.0% | |
TTCACTACCGATCATTTCTC+AGG | - | tig0026532:30972-30991 | Msa1429580:intron | 40.0% | |
!!! | AGCAGTTCAGTTCGGTTTTT+TGG | + | tig0026532:31323-31342 | None:intergenic | 40.0% |
CAGTTCGGTTCAAAACAGTT+CGG | - | tig0026532:31408-31427 | Msa1429580:intron | 40.0% | |
CAAAACAGTTCGGTTCAGTT+CGG | - | tig0026532:31418-31437 | Msa1429580:intron | 40.0% | |
ATCTCACACAACATGCATGT+GGG | + | tig0026532:31596-31615 | None:intergenic | 40.0% | |
AATCTCACACAACATGCATG+TGG | + | tig0026532:31597-31616 | None:intergenic | 40.0% | |
TAACATATGGCTAATCCCTC+TGG | + | tig0026532:31682-31701 | None:intergenic | 40.0% | |
!!! | AGCCCTGTTTTTACTTGCTA+TGG | - | tig0026532:31795-31814 | Msa1429580:intron | 40.0% |
GGCCATAGCAAGTAAAAACA+GGG | + | tig0026532:31800-31819 | None:intergenic | 40.0% | |
AGGCCATAGCAAGTAAAAAC+AGG | + | tig0026532:31801-31820 | None:intergenic | 40.0% | |
GATCTACTCTAAACTGAGGA+AGG | + | tig0026532:31839-31858 | None:intergenic | 40.0% | |
AGCAGATCTACTCTAAACTG+AGG | + | tig0026532:31843-31862 | None:intergenic | 40.0% | |
! | TAAAGAGCATGAGACCAAGT+TGG | + | tig0026532:31902-31921 | None:intergenic | 40.0% |
TTACTCAGATTGCTCCTTCT+AGG | - | tig0026532:32085-32104 | Msa1429580:intron | 40.0% | |
AGTGAATCGTAAGTCCTAGA+AGG | + | tig0026532:32102-32121 | None:intergenic | 40.0% | |
AAGAAATTACGCGTCCGATA+TGG | + | tig0026532:32248-32267 | None:intergenic | 40.0% | |
! | TTCCTTTGTTTGAGGCTGAA+TGG | - | tig0026532:32379-32398 | Msa1429580:CDS | 40.0% |
! | TTTGTTTGAGGCTGAATGGA+GGG | - | tig0026532:32383-32402 | Msa1429580:CDS | 40.0% |
GTTACACGTTTACAACCATG+AGG | - | tig0026532:32533-32552 | Msa1429580:five_prime_UTR | 40.0% | |
! | TCTATTTTCTGTCCACCTCA+TGG | + | tig0026532:32551-32570 | None:intergenic | 40.0% |
GAGAAAAACCCTAATCGCCA+TGG | + | tig0026532:24223-24242 | None:intergenic | 45.0% | |
!! | CGAAGATCAAGTTGGTCTCA+TGG | - | tig0026532:24290-24309 | Msa1429580:three_prime_UTR | 45.0% |
!!! | TGTTTTTGGCTGCCAATTGC+AGG | - | tig0026532:24654-24673 | Msa1429580:CDS | 45.0% |
! | ATACTGTTGGTGCCTGCAAT+TGG | + | tig0026532:24669-24688 | None:intergenic | 45.0% |
TGCAGGCACCAACAGTATAT+TGG | - | tig0026532:24671-24690 | Msa1429580:CDS | 45.0% | |
GCAGGCACCAACAGTATATT+GGG | - | tig0026532:24672-24691 | Msa1429580:intron | 45.0% | |
GCACCAACAGTATATTGGGA+AGG | - | tig0026532:24676-24695 | Msa1429580:intron | 45.0% | |
GTGTTCCATACTCAGAAGAC+GGG | - | tig0026532:24710-24729 | Msa1429580:intron | 45.0% | |
TGTTCCATACTCAGAAGACG+GGG | - | tig0026532:24711-24730 | Msa1429580:intron | 45.0% | |
TACAAATCTCTCCATGGCGA+AGG | + | tig0026532:24787-24806 | None:intergenic | 45.0% | |
TCGCCATGGAGAGATTTGTA+TGG | - | tig0026532:24787-24806 | Msa1429580:intron | 45.0% | |
GGCACCAATGATGTTGTTGA+TGG | - | tig0026532:25143-25162 | Msa1429580:intron | 45.0% | |
GCAACAGAGAATGCAACAAC+AGG | + | tig0026532:25532-25551 | None:intergenic | 45.0% | |
ACTTGAAAGTGGAAACGAGG+TGG | + | tig0026532:25713-25732 | None:intergenic | 45.0% | |
GACACTTGAAAGTGGAAACG+AGG | + | tig0026532:25716-25735 | None:intergenic | 45.0% | |
ACAATGAGACAACAATCGCG+AGG | + | tig0026532:25791-25810 | None:intergenic | 45.0% | |
AGAGCATGGAACTTACCTGA+CGG | - | tig0026532:26042-26061 | Msa1429580:CDS | 45.0% | |
CATCCTCCAAAGCTGTGAAA+AGG | - | tig0026532:26262-26281 | Msa1429580:intron | 45.0% | |
!! | TGTCCTTTTCACAGCTTTGG+AGG | + | tig0026532:26268-26287 | None:intergenic | 45.0% |
AGTTCTGTTTGCATCTCCAG+AGG | + | tig0026532:26309-26328 | None:intergenic | 45.0% | |
TTTGGGCCCCAAAAAATTGG+AGG | + | tig0026532:26500-26519 | None:intergenic | 45.0% | |
CCATAATATGGGTCGAGTCA+GGG | + | tig0026532:26777-26796 | None:intergenic | 45.0% | |
! | CCTGACTCGACCCATATTAT+GGG | - | tig0026532:26775-26794 | Msa1429580:intron | 45.0% |
! | TTTGCTATGTGGGCACTGTT+TGG | - | tig0026532:26802-26821 | Msa1429580:intron | 45.0% |
! | TTGCTATGTGGGCACTGTTT+GGG | - | tig0026532:26803-26822 | Msa1429580:intron | 45.0% |
GCACTGTTTGGGAGTTTGTA+GGG | - | tig0026532:26814-26833 | Msa1429580:intron | 45.0% | |
CACTGTTTGGGAGTTTGTAG+GGG | - | tig0026532:26815-26834 | Msa1429580:intron | 45.0% | |
TCGAGCTCACCCATATTATG+GGG | - | tig0026532:27000-27019 | Msa1429580:intron | 45.0% | |
ATGTCTCCCAACTTGAATGG+GGG | + | tig0026532:27051-27070 | None:intergenic | 45.0% | |
GGAATGTCTCCCAACTTGAA+TGG | + | tig0026532:27054-27073 | None:intergenic | 45.0% | |
TTGGGGGAAAGGAAAGGAAA+GGG | + | tig0026532:27092-27111 | None:intergenic | 45.0% | |
TTTGGGGGAAAGGAAAGGAA+AGG | + | tig0026532:27093-27112 | None:intergenic | 45.0% | |
CCATCAACCAGCCAATGAAA+GGG | + | tig0026532:27236-27255 | None:intergenic | 45.0% | |
ACCATCAACCAGCCAATGAA+AGG | + | tig0026532:27237-27256 | None:intergenic | 45.0% | |
!! | TTTCATTGGCTGGTTGATGG+TGG | - | tig0026532:27236-27255 | Msa1429580:CDS | 45.0% |
!! | TTCATTGGCTGGTTGATGGT+GGG | - | tig0026532:27237-27256 | Msa1429580:CDS | 45.0% |
!! | CATGCCATTTCTGGCATAGA+CGG | - | tig0026532:27447-27466 | Msa1429580:CDS | 45.0% |
TTCACCGTCTATGCCAGAAA+TGG | + | tig0026532:27454-27473 | None:intergenic | 45.0% | |
TGAAGTGAATGCAAAGAGCG+GGG | - | tig0026532:27679-27698 | Msa1429580:CDS | 45.0% | |
CACTTCCCTTTGCAACTTCT+GGG | - | tig0026532:27726-27745 | Msa1429580:CDS | 45.0% | |
ACTTCCCTTTGCAACTTCTG+GGG | - | tig0026532:27727-27746 | Msa1429580:CDS | 45.0% | |
GATTCCCCAGAAGTTGCAAA+GGG | + | tig0026532:27734-27753 | None:intergenic | 45.0% | |
TGATTCCCCAGAAGTTGCAA+AGG | + | tig0026532:27735-27754 | None:intergenic | 45.0% | |
GGGGAATCATTATCAGTCTC+AGG | - | tig0026532:27746-27765 | Msa1429580:CDS | 45.0% | |
! | TGAGGTCTGAAACTTGCTTC+TGG | + | tig0026532:27850-27869 | None:intergenic | 45.0% |
GCAAGTTTCAGACCTCATCA+AGG | - | tig0026532:27853-27872 | Msa1429580:CDS | 45.0% | |
GACCTCATCAAGGATTCATC+TGG | - | tig0026532:27863-27882 | Msa1429580:CDS | 45.0% | |
GTCCAGATGAATCCTTGATG+AGG | + | tig0026532:27868-27887 | None:intergenic | 45.0% | |
CATCAAGGATTCATCTGGAC+AGG | - | tig0026532:27868-27887 | Msa1429580:CDS | 45.0% | |
! | AACAGTCCTGGAAGCTTTGA+TGG | + | tig0026532:27905-27924 | None:intergenic | 45.0% |
! | AGGCTGCTGTATTGTCGATT+TGG | + | tig0026532:27997-28016 | None:intergenic | 45.0% |
TTGGAATGGTGCTTTGCTGA+AGG | - | tig0026532:28114-28133 | Msa1429580:intron | 45.0% | |
!! | TCATGGGTTCAGAGCATTGA+TGG | - | tig0026532:28213-28232 | Msa1429580:intron | 45.0% |
!! | CAGAGCATTGATGGTAATGG+AGG | - | tig0026532:28222-28241 | Msa1429580:intron | 45.0% |
! | ATTGTCTGGAGTAGAGAGGA+CGG | - | tig0026532:28277-28296 | Msa1429580:CDS | 45.0% |
AACAACGTCAGAACTACCTG+TGG | - | tig0026532:28321-28340 | Msa1429580:CDS | 45.0% | |
GTCAGAACTACCTGTGGAAA+AGG | - | tig0026532:28327-28346 | Msa1429580:CDS | 45.0% | |
GAACTACCTGTGGAAAAGGA+AGG | - | tig0026532:28331-28350 | Msa1429580:CDS | 45.0% | |
! | GATACACCTTCCTTTTCCAC+AGG | + | tig0026532:28340-28359 | None:intergenic | 45.0% |
GAACCTCTTCGAATGGCTTA+AGG | - | tig0026532:28378-28397 | Msa1429580:CDS | 45.0% | |
! | TATCAAGCGGAAGTGTGAGA+GGG | + | tig0026532:28608-28627 | None:intergenic | 45.0% |
AGTACTTACAAGGGCAGGAA+AGG | - | tig0026532:28863-28882 | Msa1429580:CDS | 45.0% | |
! | GGTTTTTGCTTTGCATACCG+GGG | - | tig0026532:28884-28903 | Msa1429580:CDS | 45.0% |
GAGGATTGTGAACATCCAGT+TGG | - | tig0026532:28954-28973 | Msa1429580:CDS | 45.0% | |
! | TCATCCAGTGCATGATGATG+TGG | + | tig0026532:29005-29024 | None:intergenic | 45.0% |
CGCCCAATTACAAGAAGAGA+TGG | + | tig0026532:29032-29051 | None:intergenic | 45.0% | |
CTTCTTGTAATTGGGCGATG+TGG | - | tig0026532:29035-29054 | Msa1429580:CDS | 45.0% | |
TCTTGATGCATACACAGGGA+AGG | - | tig0026532:29091-29110 | Msa1429580:intron | 45.0% | |
AATAACTCGAGCAACGGTGT+GGG | + | tig0026532:29138-29157 | None:intergenic | 45.0% | |
CAGTGGAATAACTCGAGCAA+CGG | + | tig0026532:29144-29163 | None:intergenic | 45.0% | |
CAAATGAGGTATGGTGCCTT+TGG | - | tig0026532:29450-29469 | Msa1429580:intron | 45.0% | |
!!! | GTATGGTGCCTTTGGTTTTG+AGG | - | tig0026532:29458-29477 | Msa1429580:intron | 45.0% |
TCAACTCGACAGCTTGAGTT+GGG | - | tig0026532:29626-29645 | Msa1429580:intron | 45.0% | |
ATAACCAAAGTTGCCTCCTC+TGG | + | tig0026532:30126-30145 | None:intergenic | 45.0% | |
ACATGAGATGTCAGTCATCG+AGG | - | tig0026532:30357-30376 | Msa1429580:intron | 45.0% | |
TCCGATAAGAAGCTGCTTAG+AGG | + | tig0026532:30722-30741 | None:intergenic | 45.0% | |
! | GGAACAATTGGTGATCAGGT+AGG | - | tig0026532:30739-30758 | Msa1429580:intron | 45.0% |
!! | AACGATTTTTGGATCCCCGT+CGG | - | tig0026532:30896-30915 | Msa1429580:intron | 45.0% |
ATGTGGGCATGGTTCAGTTT+GGG | + | tig0026532:31580-31599 | None:intergenic | 45.0% | |
! | AACCCCCCATTCCTTTTTCT+CGG | - | tig0026532:31641-31660 | Msa1429580:intron | 45.0% |
TTCCCCCGAGAAAAAGGAAT+GGG | + | tig0026532:31649-31668 | None:intergenic | 45.0% | |
ATTCCCCCGAGAAAAAGGAA+TGG | + | tig0026532:31650-31669 | None:intergenic | 45.0% | |
GAGAAATTCCCCCGAGAAAA+AGG | + | tig0026532:31655-31674 | None:intergenic | 45.0% | |
GGGAATTTCTCTGTACCAGA+GGG | - | tig0026532:31664-31683 | Msa1429580:intron | 45.0% | |
CTAAAAGTAGAAGGTCTGCG+AGG | - | tig0026532:31994-32013 | Msa1429580:intron | 45.0% | |
AGTAACAGTGCCTGCCAAAT+TGG | - | tig0026532:32020-32039 | Msa1429580:intron | 45.0% | |
GATGTAGACTCCAATTTGGC+AGG | + | tig0026532:32033-32052 | None:intergenic | 45.0% | |
GAGGGATGTAGACTCCAATT+TGG | + | tig0026532:32037-32056 | None:intergenic | 45.0% | |
TACTCCATAGGCAAAGACGA+GGG | + | tig0026532:32055-32074 | None:intergenic | 45.0% | |
CTCCATTCAGCCTCAAACAA+AGG | + | tig0026532:32384-32403 | None:intergenic | 45.0% | |
! | CTTTGTTTGAGGCTGAATGG+AGG | - | tig0026532:32382-32401 | Msa1429580:CDS | 45.0% |
! | TTGTTTGAGGCTGAATGGAG+GGG | - | tig0026532:32384-32403 | Msa1429580:CDS | 45.0% |
GGAGAAACACGTACTTCAGA+AGG | - | tig0026532:32441-32460 | Msa1429580:exon | 45.0% | |
ACACGTTTACAACCATGAGG+TGG | - | tig0026532:32536-32555 | Msa1429580:five_prime_UTR | 45.0% | |
!! | AATATAATATAATAAGTTAA+AGG | - | tig0026532:25815-25834 | Msa1429580:intron | 5.0% |
! | GTAATCTTCGAGTTCCACGG+AGG | + | tig0026532:24148-24167 | None:intergenic | 50.0% |
TCTCTTCAGATCCATCGCCA+TGG | - | tig0026532:24197-24216 | Msa1429580:three_prime_UTR | 50.0% | |
! | GCAGTTTGGAGGCATGTTCT+TGG | - | tig0026532:25122-25141 | Msa1429580:intron | 50.0% |
GATGGGATTGACATTGCCCT+TGG | - | tig0026532:25161-25180 | Msa1429580:intron | 50.0% | |
AACGAGGTGGAGTGAATCTC+AGG | + | tig0026532:25700-25719 | None:intergenic | 50.0% | |
GTCATCACCCTTTCCTCTGA+TGG | - | tig0026532:26009-26028 | Msa1429580:CDS | 50.0% | |
GAGCATGGAACTTACCTGAC+GGG | - | tig0026532:26043-26062 | Msa1429580:CDS | 50.0% | |
GTTTGGGAGTCTTCCCTTCA+GGG | - | tig0026532:26072-26091 | Msa1429580:CDS | 50.0% | |
GTCTTCCCTTCAGGGATCAA+AGG | - | tig0026532:26080-26099 | Msa1429580:CDS | 50.0% | |
!!! | CACCGGGCCTCCAATTTTTT+GGG | - | tig0026532:26490-26509 | Msa1429580:CDS | 50.0% |
!!! | ACCGGGCCTCCAATTTTTTG+GGG | - | tig0026532:26491-26510 | Msa1429580:CDS | 50.0% |
ATCTGCTAAGCGTGCTTCTG+TGG | - | tig0026532:26586-26605 | Msa1429580:CDS | 50.0% | |
! | CCCTGACTCGACCCATATTA+TGG | - | tig0026532:26774-26793 | Msa1429580:intron | 50.0% |
CCCATAATATGGGTCGAGTC+AGG | + | tig0026532:26778-26797 | None:intergenic | 50.0% | |
GGCACTGTTTGGGAGTTTGT+AGG | - | tig0026532:26813-26832 | Msa1429580:intron | 50.0% | |
TGTTTGGGAGTTTGTAGGGG+AGG | - | tig0026532:26818-26837 | Msa1429580:intron | 50.0% | |
GTTTGGGAGTTTGTAGGGGA+GGG | - | tig0026532:26819-26838 | Msa1429580:intron | 50.0% | |
! | GGGTTTAGAACAGGAGGGAA+GGG | + | tig0026532:27117-27136 | None:intergenic | 50.0% |
! | CTTGGGGGTTTAGAACAGGA+GGG | + | tig0026532:27122-27141 | None:intergenic | 50.0% |
! | TCCTGTTCTAAACCCCCAAG+CGG | - | tig0026532:27122-27141 | Msa1429580:intron | 50.0% |
AAGACCTTAAGGCTCCGCTT+GGG | + | tig0026532:27139-27158 | None:intergenic | 50.0% | |
AAAGACCTTAAGGCTCCGCT+TGG | + | tig0026532:27140-27159 | None:intergenic | 50.0% | |
TAACCTACCCGCCCTTTCAT+TGG | - | tig0026532:27222-27241 | Msa1429580:CDS | 50.0% | |
TCAACCAGCCAATGAAAGGG+CGG | + | tig0026532:27233-27252 | None:intergenic | 50.0% | |
! | CCCTTTCATTGGCTGGTTGA+TGG | - | tig0026532:27233-27252 | Msa1429580:CDS | 50.0% |
!! | TCATTGGCTGGTTGATGGTG+GGG | - | tig0026532:27238-27257 | Msa1429580:CDS | 50.0% |
AAGGCCAACTGCAGTAAAGG+GGG | + | tig0026532:27309-27328 | None:intergenic | 50.0% | |
CAAGGCCAACTGCAGTAAAG+GGG | + | tig0026532:27310-27329 | None:intergenic | 50.0% | |
CCAAGGCCAACTGCAGTAAA+GGG | + | tig0026532:27311-27330 | None:intergenic | 50.0% | |
ACCAAGGCCAACTGCAGTAA+AGG | + | tig0026532:27312-27331 | None:intergenic | 50.0% | |
! | GGGTGTCTTCATGCCATTTC+TGG | - | tig0026532:27438-27457 | Msa1429580:CDS | 50.0% |
GCATAGACGGTGAAGTTCTC+TGG | - | tig0026532:27460-27479 | Msa1429580:CDS | 50.0% | |
TAGACGGTGAAGTTCTCTGG+AGG | - | tig0026532:27463-27482 | Msa1429580:CDS | 50.0% | |
GCACTTCCCTTTGCAACTTC+TGG | - | tig0026532:27725-27744 | Msa1429580:CDS | 50.0% | |
! | GTATCAAGCGGAAGTGTGAG+AGG | + | tig0026532:28609-28628 | None:intergenic | 50.0% |
! | TCTAATGATCGCAAGCGCTG+AGG | - | tig0026532:28752-28771 | Msa1429580:CDS | 50.0% |
TTTGCTTTGCATACCGGGGA+TGG | - | tig0026532:28888-28907 | Msa1429580:CDS | 50.0% | |
GGTTCCACATCATCATGCAC+TGG | - | tig0026532:28998-29017 | Msa1429580:CDS | 50.0% | |
GAATAACTCGAGCAACGGTG+TGG | + | tig0026532:29139-29158 | None:intergenic | 50.0% | |
CTCAACTCGACAGCTTGAGT+TGG | - | tig0026532:29625-29644 | Msa1429580:intron | 50.0% | |
AATGCAGCACCAAAAGCCAG+TGG | - | tig0026532:30081-30100 | Msa1429580:intron | 50.0% | |
ATGCAGCACCAAAAGCCAGT+GGG | - | tig0026532:30082-30101 | Msa1429580:intron | 50.0% | |
CCAAAAGCCAGTGGGGAAAT+CGG | - | tig0026532:30090-30109 | Msa1429580:intron | 50.0% | |
AATCGGAACAGCAACACCAG+AGG | - | tig0026532:30107-30126 | Msa1429580:intron | 50.0% | |
AACACCAGAGGAGGCAACTT+TGG | - | tig0026532:30119-30138 | Msa1429580:intron | 50.0% | |
TTACAGCATGAACAGGACCC+TGG | + | tig0026532:30206-30225 | None:intergenic | 50.0% | |
TCGAGGTCTATGACCAGTCT+CGG | - | tig0026532:30374-30393 | Msa1429580:intron | 50.0% | |
GAGACAGTGCGTTGAGAAGA+GGG | - | tig0026532:31150-31169 | Msa1429580:intron | 50.0% | |
AGACAGTGCGTTGAGAAGAG+GGG | - | tig0026532:31151-31170 | Msa1429580:intron | 50.0% | |
!! | TGGGTTGGGGGGACATATTT+TGG | - | tig0026532:31177-31196 | Msa1429580:intron | 50.0% |
CATGTGGGCATGGTTCAGTT+TGG | + | tig0026532:31581-31600 | None:intergenic | 50.0% | |
ACACAACATGCATGTGGGCA+TGG | + | tig0026532:31591-31610 | None:intergenic | 50.0% | |
! | ACCCCCCATTCCTTTTTCTC+GGG | - | tig0026532:31642-31661 | Msa1429580:intron | 50.0% |
TCCCCCGAGAAAAAGGAATG+GGG | + | tig0026532:31648-31667 | None:intergenic | 50.0% | |
GGGGAATTTCTCTGTACCAG+AGG | - | tig0026532:31663-31682 | Msa1429580:intron | 50.0% | |
GAAGGACGATATGCAAGTGC+AGG | + | tig0026532:31821-31840 | None:intergenic | 50.0% | |
ACATCCCTCGTCTTTGCCTA+TGG | - | tig0026532:32048-32067 | Msa1429580:intron | 50.0% | |
CTACTCCATAGGCAAAGACG+AGG | + | tig0026532:32056-32075 | None:intergenic | 50.0% | |
TCAGCTTCGATCTTCCTCCG+TGG | - | tig0026532:24131-24150 | Msa1429580:three_prime_UTR | 55.0% | |
AACCCTAATCGCCATGGCCA+TGG | + | tig0026532:24217-24236 | None:intergenic | 55.0% | |
TTCGCCCCGTCTTCTGAGTA+TGG | + | tig0026532:24718-24737 | None:intergenic | 55.0% | |
! | GAACTTACCTGACGGGCAGA+TGG | - | tig0026532:26050-26069 | Msa1429580:CDS | 55.0% |
! | TACCTGACGGGCAGATGGTT+TGG | - | tig0026532:26055-26074 | Msa1429580:CDS | 55.0% |
! | ACCTGACGGGCAGATGGTTT+GGG | - | tig0026532:26056-26075 | Msa1429580:CDS | 55.0% |
GGTTTGGGAGTCTTCCCTTC+AGG | - | tig0026532:26071-26090 | Msa1429580:CDS | 55.0% | |
!!! | GCACCGGGCCTCCAATTTTT+TGG | - | tig0026532:26489-26508 | Msa1429580:CDS | 55.0% |
GCCCCAAAAAATTGGAGGCC+CGG | + | tig0026532:26495-26514 | None:intergenic | 55.0% | |
! | TCTGTGGCGCGGGTAACTTT+TGG | - | tig0026532:26602-26621 | Msa1429580:CDS | 55.0% |
!! | AGGGCTTTGGGGGAAAGGAA+AGG | + | tig0026532:27098-27117 | None:intergenic | 55.0% |
AACAGGAGGGAAGGGCTTTG+GGG | + | tig0026532:27109-27128 | None:intergenic | 55.0% | |
GAACAGGAGGGAAGGGCTTT+GGG | + | tig0026532:27110-27129 | None:intergenic | 55.0% | |
AGAACAGGAGGGAAGGGCTT+TGG | + | tig0026532:27111-27130 | None:intergenic | 55.0% | |
! | GGGGTTTAGAACAGGAGGGA+AGG | + | tig0026532:27118-27137 | None:intergenic | 55.0% |
! | GCTTGGGGGTTTAGAACAGG+AGG | + | tig0026532:27123-27142 | None:intergenic | 55.0% |
! | TCCGCTTGGGGGTTTAGAAC+AGG | + | tig0026532:27126-27145 | None:intergenic | 55.0% |
AGACCTTAAGGCTCCGCTTG+GGG | + | tig0026532:27138-27157 | None:intergenic | 55.0% | |
CAACCAGCCAATGAAAGGGC+GGG | + | tig0026532:27232-27251 | None:intergenic | 55.0% | |
CTGACCCCCTTTACTGCAGT+TGG | - | tig0026532:27302-27321 | Msa1429580:CDS | 55.0% | |
! | CCCTTTACTGCAGTTGGCCT+TGG | - | tig0026532:27308-27327 | Msa1429580:CDS | 55.0% |
CCAAACTATGCGTCCATCCC+CGG | + | tig0026532:28904-28923 | None:intergenic | 55.0% | |
TGCAGCACCAAAAGCCAGTG+GGG | - | tig0026532:30083-30102 | Msa1429580:intron | 55.0% | |
!!! | CCGATTTCCCCACTGGCTTT+TGG | + | tig0026532:30093-30112 | None:intergenic | 55.0% |
TGCTGTTCCGATTTCCCCAC+TGG | + | tig0026532:30100-30119 | None:intergenic | 55.0% | |
TTGCATCGCATGACCCACCA+CGG | - | tig0026532:30177-30196 | Msa1429580:intron | 55.0% | |
CGAGGTCTATGACCAGTCTC+GGG | - | tig0026532:30375-30394 | Msa1429580:intron | 55.0% | |
TGAGGGATTGAGAGTCCGAC+GGG | + | tig0026532:30914-30933 | None:intergenic | 55.0% | |
GTGAGGGATTGAGAGTCCGA+CGG | + | tig0026532:30915-30934 | None:intergenic | 55.0% | |
GGAGACAGTGCGTTGAGAAG+AGG | - | tig0026532:31149-31168 | Msa1429580:intron | 55.0% | |
GACAGTGCGTTGAGAAGAGG+GGG | - | tig0026532:31152-31171 | Msa1429580:intron | 55.0% | |
ACAGTGCGTTGAGAAGAGGG+GGG | - | tig0026532:31153-31172 | Msa1429580:intron | 55.0% | |
CCCCGAGAAAAAGGAATGGG+GGG | + | tig0026532:31646-31665 | None:intergenic | 55.0% | |
! | CCCCCCATTCCTTTTTCTCG+GGG | - | tig0026532:31643-31662 | Msa1429580:intron | 55.0% |
CCCCCGAGAAAAAGGAATGG+GGG | + | tig0026532:31647-31666 | None:intergenic | 55.0% | |
! | CCCCCATTCCTTTTTCTCGG+GGG | - | tig0026532:31644-31663 | Msa1429580:intron | 55.0% |
! | TTTGAGGCTGAATGGAGGGG+AGG | - | tig0026532:32387-32406 | Msa1429580:CDS | 55.0% |
CAGATCCATCGCCATGGCCA+TGG | - | tig0026532:24203-24222 | Msa1429580:three_prime_UTR | 60.0% | |
AATCGCCATGGCCATGGCGA+TGG | + | tig0026532:24211-24230 | None:intergenic | 60.0% | |
TCGCCATGGCCATGGCGATT+AGG | - | tig0026532:24211-24230 | Msa1429580:three_prime_UTR | 60.0% | |
CGCCATGGCCATGGCGATTA+GGG | - | tig0026532:24212-24231 | Msa1429580:three_prime_UTR | 60.0% | |
GCTTCACTCGACCTTCGCCA+TGG | - | tig0026532:24773-24792 | Msa1429580:intron | 60.0% | |
TCCCAAACCATCTGCCCGTC+AGG | + | tig0026532:26060-26079 | None:intergenic | 60.0% | |
! | AAGGTGCCATGACTCGACCC+AGG | - | tig0026532:26434-26453 | Msa1429580:intron | 60.0% |
! | AGGTGCCATGACTCGACCCA+GGG | - | tig0026532:26435-26454 | Msa1429580:intron | 60.0% |
CTAAGCGTGCTTCTGTGGCG+CGG | - | tig0026532:26591-26610 | Msa1429580:CDS | 60.0% | |
TAAGCGTGCTTCTGTGGCGC+GGG | - | tig0026532:26592-26611 | Msa1429580:CDS | 60.0% | |
TGGGAGTTTGTAGGGGAGGG+AGG | - | tig0026532:26822-26841 | Msa1429580:intron | 60.0% | |
GGGAGTTTGTAGGGGAGGGA+GGG | - | tig0026532:26823-26842 | Msa1429580:intron | 60.0% | |
GGAGTTTGTAGGGGAGGGAG+GGG | - | tig0026532:26824-26843 | Msa1429580:intron | 60.0% | |
GAGTTTGTAGGGGAGGGAGG+GGG | - | tig0026532:26825-26844 | Msa1429580:intron | 60.0% | |
AGTTTGTAGGGGAGGGAGGG+GGG | - | tig0026532:26826-26845 | Msa1429580:intron | 60.0% | |
!! | AGGGAAGGGCTTTGGGGGAA+AGG | + | tig0026532:27103-27122 | None:intergenic | 60.0% |
! | ACAGGAGGGAAGGGCTTTGG+GGG | + | tig0026532:27108-27127 | None:intergenic | 60.0% |
AACCCCCAAGCGGAGCCTTA+AGG | - | tig0026532:27132-27151 | Msa1429580:intron | 60.0% | |
GACCTTAAGGCTCCGCTTGG+GGG | + | tig0026532:27137-27156 | None:intergenic | 60.0% | |
CAGCCAATGAAAGGGCGGGT+AGG | + | tig0026532:27228-27247 | None:intergenic | 60.0% | |
CTACCCGCCCTTTCATTGGC+TGG | - | tig0026532:27226-27245 | Msa1429580:CDS | 60.0% | |
GCAGTAAAGGGGGTCAGTGC+AGG | + | tig0026532:27299-27318 | None:intergenic | 60.0% | |
!! | TGAAGGTGAGTTGGTGGCGC+TGG | - | tig0026532:27970-27989 | Msa1429580:CDS | 60.0% |
CCGGGGATGGACGCATAGTT+TGG | - | tig0026532:28901-28920 | Msa1429580:CDS | 60.0% | |
CGGAACAGCAACACCAGAGG+AGG | - | tig0026532:30110-30129 | Msa1429580:intron | 60.0% | |
ATGACCCACCACGGTTGCCA+GGG | - | tig0026532:30186-30205 | Msa1429580:intron | 60.0% | |
GGTCTATGACCAGTCTCGGG+CGG | - | tig0026532:30378-30397 | Msa1429580:intron | 60.0% | |
GAGGGATTGAGAGTCCGACG+GGG | + | tig0026532:30913-30932 | None:intergenic | 60.0% | |
TGCGTTGAGAAGAGGGGGGA+TGG | - | tig0026532:31157-31176 | Msa1429580:intron | 60.0% | |
GCGTTGAGAAGAGGGGGGAT+GGG | - | tig0026532:31158-31177 | Msa1429580:intron | 60.0% | |
TGAGAAGAGGGGGGATGGGT+TGG | - | tig0026532:31162-31181 | Msa1429580:intron | 60.0% | |
! | GAGAAGAGGGGGGATGGGTT+GGG | - | tig0026532:31163-31182 | Msa1429580:intron | 60.0% |
!! | AGAAGAGGGGGGATGGGTTG+GGG | - | tig0026532:31164-31183 | Msa1429580:intron | 60.0% |
CATGACCCACCACGGTTGCC+AGG | - | tig0026532:30185-30204 | Msa1429580:intron | 65.0% | |
AGGACCCTGGCAACCGTGGT+GGG | + | tig0026532:30193-30212 | None:intergenic | 65.0% | |
GAACAGGACCCTGGCAACCG+TGG | + | tig0026532:30197-30216 | None:intergenic | 65.0% | |
GCTGACATACCGCCCGAGAC+TGG | + | tig0026532:30390-30409 | None:intergenic | 65.0% | |
!! | GAAGAGGGGGGATGGGTTGG+GGG | - | tig0026532:31165-31184 | Msa1429580:intron | 65.0% |
!! | AAGAGGGGGGATGGGTTGGG+GGG | - | tig0026532:31166-31185 | Msa1429580:intron | 65.0% |
GCCATGACTCGACCCAGGGC+CGG | - | tig0026532:26439-26458 | Msa1429580:intron | 70.0% | |
!! | AGCCTCGACGGGCTATGGGC+CGG | + | tig0026532:26461-26480 | None:intergenic | 70.0% |
GCCCATAGCCCGTCGAGGCT+GGG | - | tig0026532:26461-26480 | Msa1429580:CDS | 70.0% | |
!! | GCCCAGCCTCGACGGGCTAT+GGG | + | tig0026532:26465-26484 | None:intergenic | 70.0% |
!! | AGCCCAGCCTCGACGGGCTA+TGG | + | tig0026532:26466-26485 | None:intergenic | 70.0% |
AGCCCGTCGAGGCTGGGCTA+CGG | - | tig0026532:26467-26486 | Msa1429580:CDS | 70.0% | |
TGCCGTAGCCCAGCCTCGAC+GGG | + | tig0026532:26472-26491 | None:intergenic | 70.0% | |
GTGCCGTAGCCCAGCCTCGA+CGG | + | tig0026532:26473-26492 | None:intergenic | 70.0% | |
TCGAGGCTGGGCTACGGCAC+CGG | - | tig0026532:26473-26492 | Msa1429580:CDS | 70.0% | |
CAGGACCCTGGCAACCGTGG+TGG | + | tig0026532:30194-30213 | None:intergenic | 70.0% | |
GCCGGCCCTGGGTCGAGTCA+TGG | + | tig0026532:26443-26462 | None:intergenic | 75.0% | |
! | ACGGGCTATGGGCCGGCCCT+GGG | + | tig0026532:26454-26473 | None:intergenic | 75.0% |
GGCCCATAGCCCGTCGAGGC+TGG | - | tig0026532:26460-26479 | Msa1429580:CDS | 75.0% | |
CGAGGCTGGGCTACGGCACC+GGG | - | tig0026532:26474-26493 | Msa1429580:CDS | 75.0% | |
!!! | GACGGGCTATGGGCCGGCCC+TGG | + | tig0026532:26455-26474 | None:intergenic | 80.0% |
! | GGCCGGCCCATAGCCCGTCG+AGG | - | tig0026532:26456-26475 | Msa1429580:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0026532 | gene | 24064 | 32602 | 24064 | ID=Msa1429580;Name=Msa1429580 |
tig0026532 | mRNA | 24064 | 32602 | 24064 | ID=Msa1429580-mRNA-1;Parent=Msa1429580;Name=Msa1429580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=152|0.90|0.91|1|1|1|12|366|1003 |
tig0026532 | exon | 24064 | 24690 | 24064 | ID=Msa1429580-mRNA-1:exon:6617;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 25673 | 25786 | 25673 | ID=Msa1429580-mRNA-1:exon:6616;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 25910 | 26104 | 25910 | ID=Msa1429580-mRNA-1:exon:6615;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 26267 | 26362 | 26267 | ID=Msa1429580-mRNA-1:exon:6614;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 26445 | 26666 | 26445 | ID=Msa1429580-mRNA-1:exon:6613;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 27209 | 28000 | 27209 | ID=Msa1429580-mRNA-1:exon:6612;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 28267 | 29068 | 28267 | ID=Msa1429580-mRNA-1:exon:6611;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 29161 | 29276 | 29161 | ID=Msa1429580-mRNA-1:exon:6610;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 30538 | 30659 | 30538 | ID=Msa1429580-mRNA-1:exon:6609;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 31478 | 31540 | 31478 | ID=Msa1429580-mRNA-1:exon:6608;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 31863 | 31990 | 31863 | ID=Msa1429580-mRNA-1:exon:6607;Parent=Msa1429580-mRNA-1 |
tig0026532 | exon | 32350 | 32602 | 32350 | ID=Msa1429580-mRNA-1:exon:6606;Parent=Msa1429580-mRNA-1 |
tig0026532 | five_prime_UTR | 32451 | 32602 | 32451 | ID=Msa1429580-mRNA-1:five_prime_utr;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 32350 | 32450 | 32350 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 31863 | 31990 | 31863 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 31478 | 31540 | 31478 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 30538 | 30659 | 30538 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 29161 | 29276 | 29161 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 28267 | 29068 | 28267 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 27209 | 28000 | 27209 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 26445 | 26666 | 26445 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 26267 | 26362 | 26267 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 25910 | 26104 | 25910 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 25673 | 25786 | 25673 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | CDS | 24430 | 24690 | 24430 | ID=Msa1429580-mRNA-1:cds;Parent=Msa1429580-mRNA-1 |
tig0026532 | three_prime_UTR | 24064 | 24429 | 24064 | ID=Msa1429580-mRNA-1:three_prime_utr;Parent=Msa1429580-mRNA-1 |
Gene Sequence |
Protein sequence |