AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1045280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1045280 MtrunA17_Chr7g0225191 97.719 570 13 0 91 660 20 589 0.0 1122
Msa1045280 MtrunA17_Chr7g0225191 68.841 138 41 2 1 138 23 158 1.44e-49 182
Msa1045280 MtrunA17_Chr3g0132161 50.783 575 236 5 91 653 20 559 0.0 548
Msa1045280 MtrunA17_Chr3g0132161 61.538 91 35 0 1 91 23 113 3.08e-28 119
Msa1045280 MtrunA17_Chr2g0304561 35.512 566 342 7 93 657 19 562 6.77e-110 343
Msa1045280 MtrunA17_Chr2g0304561 41.304 92 51 1 1 89 20 111 1.34e-13 73.9
Msa1045280 MtrunA17_Chr4g0064981 35.889 574 336 9 93 657 18 568 2.00e-109 342
Msa1045280 MtrunA17_Chr4g0064981 41.905 105 56 2 1 100 19 123 1.71e-15 80.1
Msa1045280 MtrunA17_Chr5g0405621 34.798 569 312 7 91 656 18 530 1.79e-101 320
Msa1045280 MtrunA17_Chr5g0405621 40.449 89 53 0 1 89 21 109 1.95e-13 73.6
Msa1045280 MtrunA17_Chr1g0210274 35.740 554 313 9 100 647 40 556 1.70e-100 319
Msa1045280 MtrunA17_Chr1g0210274 35.878 131 70 3 7 131 40 162 1.42e-14 77.0
Msa1045280 MtrunA17_Chr4g0037301 33.986 562 326 7 91 651 20 537 4.75e-100 317
Msa1045280 MtrunA17_Chr4g0037301 42.697 89 51 0 1 89 23 111 4.90e-14 75.5
Msa1045280 MtrunA17_Chr7g0264861 34.813 563 323 7 96 647 39 568 2.31e-98 314
Msa1045280 MtrunA17_Chr7g0264861 42.697 89 51 0 3 91 39 127 7.55e-14 74.7
Msa1045280 MtrunA17_Chr1g0171591 34.669 574 322 10 96 653 34 570 8.05e-98 312
Msa1045280 MtrunA17_Chr1g0171591 45.977 87 47 0 3 89 34 120 1.08e-15 80.9
Msa1045280 MtrunA17_Chr1g0210284 34.964 552 320 8 100 647 40 556 1.20e-96 309
Msa1045280 MtrunA17_Chr1g0210284 35.115 131 71 3 7 131 40 162 3.29e-13 72.8
Msa1045280 MtrunA17_Chr1g0210291 35.284 564 309 13 96 647 35 554 1.21e-96 309
Msa1045280 MtrunA17_Chr1g0210291 41.379 87 51 0 3 89 35 121 4.10e-13 72.4
Msa1045280 MtrunA17_Chr1g0174101 34.744 567 322 10 96 653 34 561 1.71e-93 300
Msa1045280 MtrunA17_Chr1g0174101 42.529 87 50 0 3 89 34 120 1.30e-13 73.9
Msa1045280 MtrunA17_Chr2g0330551 32.236 577 307 12 93 647 14 528 1.14e-89 289
Msa1045280 MtrunA17_Chr5g0442481 32.241 580 322 11 90 660 15 532 2.58e-87 283
Msa1045280 MtrunA17_Chr2g0333371 32.320 362 172 8 302 657 4 298 3.07e-49 174
Msa1045280 MtrunA17_Chr7g0251871 24.274 585 390 14 91 658 12 560 9.34e-40 154
Msa1045280 MtrunA17_Chr7g0251871 38.462 91 55 1 1 91 15 104 7.48e-12 68.6
Msa1045280 MtrunA17_Chr3g0106801 24.823 564 358 11 91 649 12 514 7.92e-36 141
Msa1045280 MtrunA17_Chr5g0408921 24.956 569 393 13 91 647 12 558 3.28e-35 140
Msa1045280 MtrunA17_Chr3g0106821 26.221 389 247 6 94 479 15 366 3.80e-25 107
Msa1045280 MtrunA17_Chr8g0369621 30.233 172 117 3 91 261 53 222 2.86e-14 76.3
Msa1045280 MtrunA17_Chr8g0369621 26.616 263 158 7 398 647 359 599 3.75e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1045280 AT3G01930.2 69.983 573 152 4 91 654 21 582 0.0 799
Msa1045280 AT3G01930.2 81.319 91 17 0 1 91 24 114 2.21e-40 156
Msa1045280 AT5G14120.1 70.951 568 150 4 91 654 21 577 0.0 798
Msa1045280 AT5G14120.1 79.121 91 19 0 1 91 24 114 1.01e-39 154
Msa1045280 AT3G01930.1 67.708 480 135 4 184 654 1 469 0.0 647
Msa1045280 AT3G01930.3 72.048 415 107 3 91 496 21 435 0.0 585
Msa1045280 AT3G01930.3 81.319 91 17 0 1 91 24 114 2.09e-41 156
Msa1045280 AT5G50630.1 47.803 569 242 7 91 655 21 538 0.0 524
Msa1045280 AT5G50630.1 66.667 90 29 1 1 89 24 113 3.05e-30 125
Msa1045280 AT5G50520.1 47.803 569 242 7 91 655 21 538 0.0 524
Msa1045280 AT5G50520.1 66.667 90 29 1 1 89 24 113 3.05e-30 125
Msa1045280 AT2G39210.1 35.727 571 321 8 93 653 28 562 4.40e-107 337
Msa1045280 AT2G39210.1 35.556 135 73 3 3 131 31 157 2.95e-13 73.6
Msa1045280 AT1G80530.1 35.563 568 329 6 93 657 20 553 5.31e-105 330
Msa1045280 AT1G80530.1 44.318 88 49 0 2 89 22 109 8.68e-13 72.0
Msa1045280 AT4G34950.1 33.622 577 338 7 91 658 21 561 3.80e-104 328
Msa1045280 AT4G34950.1 39.326 89 54 0 1 89 24 112 4.45e-11 66.2
Msa1045280 AT2G28120.1 35.325 569 315 12 96 653 27 553 6.50e-103 325
Msa1045280 AT2G28120.1 36.296 135 72 3 3 131 27 153 2.05e-16 83.6
Msa1045280 AT2G16660.1 34.574 564 317 7 91 651 19 533 3.46e-97 309
Msa1045280 AT1G74780.1 32.014 581 309 9 93 653 14 528 8.68e-86 279
Msa1045280 AT2G34350.1 31.100 582 320 10 90 657 11 525 2.08e-85 278
Msa1045280 AT2G34350.2 31.100 582 320 10 90 657 11 525 2.08e-85 278
Msa1045280 AT1G18940.1 29.809 577 318 7 93 653 16 521 8.04e-82 268
Msa1045280 AT2G34355.1 30.069 582 324 11 90 657 11 523 4.11e-78 258
Msa1045280 AT2G16660.2 34.739 403 229 6 91 490 19 390 3.52e-62 212
Msa1045280 AT2G34355.2 30.159 441 233 10 223 657 2 373 1.17e-52 186
Msa1045280 AT4G19450.1 26.287 544 364 15 91 621 12 531 5.03e-36 143
Msa1045280 AT3G01630.1 25.480 573 360 15 91 650 28 546 3.97e-34 137
Msa1045280 AT3G01630.2 25.480 573 360 15 91 650 46 564 4.69e-34 137
Msa1045280 AT1G31470.1 23.304 575 369 15 91 650 48 565 1.92e-31 130
Msa1045280 AT2G30300.1 25.305 573 339 13 85 648 5 497 6.21e-31 127
Msa1045280 AT4G19450.2 26.683 401 274 10 91 479 12 404 1.02e-27 116
Msa1045280 AT5G45275.1 31.214 173 114 2 91 261 12 181 5.84e-19 91.3
Msa1045280 AT5G45275.1 27.984 243 154 6 407 647 332 555 1.86e-14 77.0

Find 164 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATTGTCCTTCTGTTTC+TGG 0.103789 7_2:+4574313 None:intergenic
AAGTTCCTGTTCTTCCTTTA+TGG 0.160040 7_2:-4577401 Msa1045280:CDS
AAGTTCCTGTTCTTCCTTTA+TGG 0.160040 7_2:-4579302 Msa1045280:CDS
AAATCTTTCACGTTGGTTTA+TGG 0.174292 7_2:-4574523 Msa1045280:CDS
GCTACAGCCTCTGAATTATT+TGG 0.203666 7_2:-4573165 Msa1045280:CDS
TCGTCTCCATGATCAGTATT+TGG 0.218122 7_2:-4573967 Msa1045280:CDS
TCAGTGTTCATAGTAATAAA+AGG 0.218491 7_2:+4572519 None:intergenic
ATCAATATAACACAAATATT+TGG 0.228300 7_2:+4572626 None:intergenic
ATGGTCTTAGGTTCTGGATC+TGG 0.228794 7_2:-4574055 Msa1045280:CDS
AGTTCCTGTTCTTCCTTTAT+GGG 0.235007 7_2:-4577400 Msa1045280:CDS
AGTTCCTGTTCTTCCTTTAT+GGG 0.235007 7_2:-4579301 Msa1045280:CDS
ATCAGTATTTGGAACTTTCT+TGG 0.238824 7_2:-4573956 Msa1045280:CDS
CTACTTCAACACAGTTTCTT+TGG 0.254430 7_2:-4574776 Msa1045280:CDS
TCTTTGAATCTTGTTGGTTA+TGG 0.275308 7_2:-4577450 Msa1045280:CDS
TCTTTGAATCTTGTTGGTTA+TGG 0.275308 7_2:-4579351 Msa1045280:CDS
ATGATGCTATATTCAGGTTT+TGG 0.278330 7_2:+4573016 None:intergenic
CGGTCAGATGAGCCAGTCTT+TGG 0.285592 7_2:-4574011 Msa1045280:CDS
ATTTGGGCTGCTTTGCTTGT+TGG 0.296489 7_2:-4577477 Msa1045280:CDS
TGAATCTTGTTGGTTATGGC+TGG 0.301515 7_2:-4577446 Msa1045280:CDS
TGAATCTTGTTGGTTATGGC+TGG 0.301515 7_2:-4579347 Msa1045280:CDS
GGTTTCTCCACTTGTTCTAT+AGG 0.305624 7_2:-4572561 Msa1045280:three_prime_UTR
CTTGTTGGCTGCTTATTTGA+TGG 0.308655 7_2:-4574491 Msa1045280:CDS
GCTGGTATAGGATATTTATT+TGG 0.314259 7_2:-4577627 Msa1045280:CDS
GCTGGTATAGGATATTTATT+TGG 0.314259 7_2:-4579528 Msa1045280:CDS
ATTGTTTATGCTAGCTTGTA+TGG 0.317743 7_2:-4572856 Msa1045280:CDS
TCATGCATCGTTAATATTCA+TGG 0.329075 7_2:-4574635 Msa1045280:CDS
ATTTCCATGGTCTTAGGTTC+TGG 0.350122 7_2:-4574061 Msa1045280:CDS
TACTTTCTAAAGTATAATAA+TGG 0.356005 7_2:+4572774 None:intergenic
GTTTCTCCACTTGTTCTATA+GGG 0.356234 7_2:-4572560 Msa1045280:three_prime_UTR
GACTTGGTTACGGTGCTCAT+TGG 0.360347 7_2:-4573200 Msa1045280:CDS
ACAAGTAACGCAGCCCAAAT+AGG 0.367045 7_2:+4579381 None:intergenic
ATTTGGGCTGCGTTACTTGT+TGG 0.369726 7_2:-4579378 Msa1045280:CDS
GCAGCTAATGCAGCTGGTCT+TGG 0.373732 7_2:+4573306 None:intergenic
AATATTAACGATGCATGATC+AGG 0.374870 7_2:+4574640 None:intergenic
TTCAAAATTTCCCGAAAAGC+CGG 0.380401 7_2:-4574744 Msa1045280:CDS
TGCTAGCTGGTAAATCCATT+TGG 0.381290 7_2:+4572677 None:intergenic
CTTATATTTGTGGGAACAAA+TGG 0.381637 7_2:-4574805 Msa1045280:CDS
TGCTTATTTGATGGGAGTTA+TGG 0.383685 7_2:-4574482 Msa1045280:CDS
ACAAGCAAAGCAGCCCAAAT+AGG 0.388490 7_2:+4577480 None:intergenic
ATACGAATGATGCTATATTC+AGG 0.390473 7_2:+4573010 None:intergenic
TGGTCTTAGGTTCTGGATCT+GGG 0.391749 7_2:-4574054 Msa1045280:CDS
GGAGCTTCTTTGAATCTTGT+TGG 0.392765 7_2:-4577456 Msa1045280:CDS
GGAGCTTCTTTGAATCTTGT+TGG 0.392765 7_2:-4579357 Msa1045280:CDS
TTATGGTGTATGTCTCTTGT+TGG 0.401325 7_2:-4574506 Msa1045280:CDS
TACGTTGGCACTTTACTAGT+TGG 0.411740 7_2:-4573222 Msa1045280:CDS
TTCATTGGCATGGGATGGCC+AGG 0.416629 7_2:-4573252 Msa1045280:CDS
TTACTAGTTGGACTTGGTTA+CGG 0.418091 7_2:-4573210 Msa1045280:CDS
AAAGTTCCAAATACTGATCA+TGG 0.424968 7_2:+4573961 None:intergenic
TTATTTGGTTTAAGAAACTT+TGG 0.428476 7_2:-4573150 Msa1045280:CDS
ATGTGTATTCTTATATTTGT+GGG 0.431347 7_2:-4574814 Msa1045280:CDS
TCAAAATTTCCCGAAAAGCC+GGG 0.432516 7_2:-4574743 Msa1045280:CDS
GAGAAGACAAGAGTTCCAAC+AGG 0.434937 7_2:+4573096 None:intergenic
GGGAGCAAGTCCACTTCCTT+AGG 0.435147 7_2:+4574244 None:intergenic
TTGTTGGCTGCTTATTTGAT+GGG 0.435499 7_2:-4574490 Msa1045280:CDS
AATGACAAAGGAATTATAAT+CGG 0.440338 7_2:+4574382 None:intergenic
CATATGGAACCTTCGCACTT+TGG 0.443970 7_2:+4572961 None:intergenic
ATTCCTTTGTCATTAACCTT+CGG 0.444957 7_2:-4574373 Msa1045280:CDS
TGAAGTAATATTAAGTGAGT+TGG 0.445671 7_2:-4574278 Msa1045280:CDS
AAGGAGCTGTGAGGGTTAAG+AGG 0.447202 7_2:-4574159 Msa1045280:CDS
TTGTTGGTTATGGCTGGGTT+TGG 0.455424 7_2:-4577440 Msa1045280:CDS
TTGTTGGTTATGGCTGGGTT+TGG 0.455424 7_2:-4579341 Msa1045280:CDS
TTACAATCATGGGCTGGTAT+AGG 0.458468 7_2:-4577639 Msa1045280:CDS
TTACAATCATGGGCTGGTAT+AGG 0.458468 7_2:-4579540 Msa1045280:CDS
GGATTATGCATTGTTGCGGC+AGG 0.460540 7_2:-4572910 Msa1045280:CDS
ACTTGGTTACGGTGCTCATT+GGG 0.463235 7_2:-4573199 Msa1045280:CDS
GAGCAATGTGGTTACAATCA+TGG 0.466460 7_2:-4577650 Msa1045280:CDS
GAGCAATGTGGTTACAATCA+TGG 0.466460 7_2:-4579551 None:intergenic
CTGCCATGATAGTGGATGTC+AGG 0.467856 7_2:+4572932 None:intergenic
AACTTTCTTGGACGTGTTGG+AGG 0.470215 7_2:-4573944 Msa1045280:CDS
CAGTGTTCATAGTAATAAAA+GGG 0.472193 7_2:+4572520 None:intergenic
GGTCAGATGAGCCAGTCTTT+GGG 0.473244 7_2:-4574010 Msa1045280:CDS
CTTTAGAAAGTATTTGTAGC+TGG 0.473608 7_2:-4572763 Msa1045280:three_prime_UTR
GCATAATCCTGCCATGATAG+TGG 0.474193 7_2:+4572924 None:intergenic
CAAAGAAACTGTGTTGAAGT+AGG 0.476111 7_2:+4574777 None:intergenic
CGTTTCTGCCTTTCCGACGC+AGG 0.478111 7_2:+4574223 None:intergenic
ACAGCCCATAAAGGAAGAAC+AGG 0.480902 7_2:+4577396 None:intergenic
ACAGCCCATAAAGGAAGAAC+AGG 0.480902 7_2:+4579297 None:intergenic
TAGCATAAACAATCCTTGTT+CGG 0.485537 7_2:+4572866 None:intergenic
TTTGAGTGTGGAAAACCAAA+TGG 0.486104 7_2:-4572692 Msa1045280:three_prime_UTR
TCTCTAGTCTCATTGCTAGT+AGG 0.486798 7_2:-4573077 Msa1045280:CDS
AATAATTCAGAGGCTGTAGC+TGG 0.491533 7_2:+4573168 None:intergenic
GGTCCAGCATTGGTAGGAAT+AGG 0.493698 7_2:-4574604 Msa1045280:CDS
ATGTTCATTGTTAGACCTGT+CGG 0.494988 7_2:-4574577 Msa1045280:CDS
CTGCTGCAAGCTGCTGCAGA+AGG 0.495751 7_2:-4574178 Msa1045280:CDS
TTAATATTCATGGTTGCTGT+TGG 0.497023 7_2:-4574625 Msa1045280:CDS
AGACCTATTCCTACCAATGC+TGG 0.505924 7_2:+4574601 None:intergenic
GGATGTCAGGAAGAAGCATA+TGG 0.506273 7_2:+4572945 None:intergenic
CCCGAAAAGCCGGGGTCCCG+TGG 0.506898 7_2:-4574734 Msa1045280:CDS
GAATCTTGTTGGTTATGGCT+GGG 0.508667 7_2:-4577445 Msa1045280:CDS
GAATCTTGTTGGTTATGGCT+GGG 0.508667 7_2:-4579346 Msa1045280:CDS
TTTCTTGGACGTGTTGGAGG+CGG 0.511820 7_2:-4573941 Msa1045280:CDS
TGGAACTTTCTTGGACGTGT+TGG 0.513657 7_2:-4573947 Msa1045280:CDS
ACTTGTTTGTGACCTCCGAC+AGG 0.514273 7_2:+4574562 None:intergenic
AAAAGCCGGGGTCCCGTGGT+TGG 0.515273 7_2:-4574730 Msa1045280:CDS
AGATGAGAAGCCTAAGGAAG+TGG 0.515527 7_2:-4574254 Msa1045280:CDS
TGTTTCTCGTGTTCCGAACA+AGG 0.516891 7_2:-4572879 Msa1045280:CDS
AGCAATGTGGTTACAATCAT+GGG 0.517938 7_2:-4577649 Msa1045280:CDS
AGCAATGTGGTTACAATCAT+GGG 0.517938 7_2:-4579550 None:intergenic
CTGAAATTTGTCCTTATCAG+TGG 0.522059 7_2:-4572500 Msa1045280:three_prime_UTR
ACCGCGTGGAAGCTGCTAGC+TGG 0.525236 7_2:+4572664 None:intergenic
CCCTTTAAAATTCCAACCAC+GGG 0.526339 7_2:+4574718 None:intergenic
CTTCCTGACATCCACTATCA+TGG 0.528499 7_2:-4572935 Msa1045280:CDS
ATCACTCTAGCAAACCCTGT+TGG 0.532002 7_2:-4573111 Msa1045280:CDS
GGTTGCTGTTGGTCCAGCAT+TGG 0.533114 7_2:-4574614 Msa1045280:CDS
AAACAAGTGCGGCCGTCGGA+TGG 0.533967 7_2:-4574547 Msa1045280:CDS
ATAATGGACACCAAAATACT+TGG 0.535780 7_2:+4572790 None:intergenic
GTATCTAGTGCGCTTAATGT+TGG 0.537346 7_2:-4572991 Msa1045280:CDS
GCTGTTGGTCCAGCATTGGT+AGG 0.539156 7_2:-4574610 Msa1045280:CDS
GGCACTTTACTAGTTGGACT+TGG 0.541785 7_2:-4573216 Msa1045280:CDS
ACGATGCATGATCAGGGGAA+TGG 0.543155 7_2:+4574647 None:intergenic
CATTGTCATATCCCAAAGAC+TGG 0.548663 7_2:+4573999 None:intergenic
TGAAATGCAGCTAATGCAGC+TGG 0.548805 7_2:+4573300 None:intergenic
AGAAGTGCTTCTTCCTCTAG+AGG 0.550119 7_2:+4574337 None:intergenic
GTTTCTGCCTTTCCGACGCA+GGG 0.551610 7_2:+4574224 None:intergenic
ACTTGCTCCCTGCGTCGGAA+AGG 0.554542 7_2:-4574231 Msa1045280:CDS
TGCTGCAGAAGGAGCTGTGA+GGG 0.559996 7_2:-4574167 Msa1045280:CDS
GAATTTCCCTATAGAACAAG+TGG 0.560916 7_2:+4572554 None:intergenic
AAGGGCTTTGCTGGATTGAG+TGG 0.565910 7_2:-4574700 Msa1045280:CDS
CTGACATCCACTATCATGGC+AGG 0.565999 7_2:-4572931 Msa1045280:CDS
GAGCTGTGAGGGTTAAGAGG+AGG 0.567528 7_2:-4574156 Msa1045280:CDS
CAAAATTTCCCGAAAAGCCG+GGG 0.569217 7_2:-4574742 Msa1045280:CDS
GAACAAGTGGAGAAACCTCC+TGG 0.569328 7_2:+4572567 None:intergenic
AAATTCCAACCACGGGACCC+CGG 0.570142 7_2:+4574725 None:intergenic
AGTGGACTTGCTCCCTGCGT+CGG 0.572578 7_2:-4574236 Msa1045280:CDS
GGCAGGATTATGCATTGTTG+CGG 0.574036 7_2:-4572914 Msa1045280:CDS
AAAGACCTTGGTGATTGTGT+TGG 0.574197 7_2:-4577534 Msa1045280:CDS
TTTCAACTAGCTATGACTGT+TGG 0.574245 7_2:-4573282 Msa1045280:CDS
GTTGGAAGATGAGAAGCCTA+AGG 0.577142 7_2:-4574260 Msa1045280:CDS
GTCATTAACCTTCGGCCCTG+CGG 0.579108 7_2:-4574365 Msa1045280:CDS
ATATTAACGATGCATGATCA+GGG 0.581843 7_2:+4574641 None:intergenic
GTGAGGGTTAAGAGGAGGAG+AGG 0.584228 7_2:-4574151 Msa1045280:CDS
TCTTAAACCAAATAATTCAG+AGG 0.585066 7_2:+4573158 None:intergenic
GCCCTTTAAAATTCCAACCA+CGG 0.585494 7_2:+4574717 None:intergenic
GTAAAATCTTCTCCTCTATG+TGG 0.590594 7_2:+4574127 None:intergenic
AGCAAGGCAAATTTGACACC+AGG 0.593011 7_2:-4572585 Msa1045280:three_prime_UTR
ATGTGGTTACAATCATGGGC+TGG 0.593494 7_2:-4577645 Msa1045280:CDS
ATGTGGTTACAATCATGGGC+TGG 0.593494 7_2:-4579546 Msa1045280:CDS
AAAGACCTTGGTGATGCTGT+TGG 0.596617 7_2:-4579435 Msa1045280:CDS
AGATCCAGAACCTAAGACCA+TGG 0.600742 7_2:+4574057 None:intergenic
GTGCCAACGTACATTGAACC+TGG 0.605966 7_2:+4573234 None:intergenic
AGGAGGAGAGGACCACATAG+AGG 0.606447 7_2:-4574139 Msa1045280:CDS
TTGACTGTAATTGACAATCT+CGG 0.606676 7_2:-4574031 Msa1045280:CDS
GGTGACGCGCCAAAGTGCGA+AGG 0.621883 7_2:-4572970 Msa1045280:CDS
GATGTGTATTCTTATATTTG+TGG 0.622481 7_2:-4574815 Msa1045280:CDS
GATTATGCATTGTTGCGGCA+GGG 0.630180 7_2:-4572909 Msa1045280:CDS
GGGCCGAAGGTTAATGACAA+AGG 0.631796 7_2:+4574370 None:intergenic
AAGGCAAATTTGACACCAGG+AGG 0.635920 7_2:-4572582 Msa1045280:three_prime_UTR
TTAGGTGTTGCAAAAGACCT+TGG 0.637244 7_2:-4577546 Msa1045280:CDS
TTAGGTGTTGCAAAAGACCT+TGG 0.637244 7_2:-4579447 Msa1045280:CDS
TTTAATCAAAGCTTGCGTCA+AGG 0.639178 7_2:+4574105 None:intergenic
GAAGCAGAGAAACAAGCTCA+TGG 0.639621 7_2:-4573042 Msa1045280:CDS
TCACAAACAAGTGCGGCCGT+CGG 0.640280 7_2:-4574551 Msa1045280:CDS
GCACTTCTTCCAGAAACAGA+AGG 0.653183 7_2:-4574322 Msa1045280:CDS
TTCATTGTTAGACCTGTCGG+AGG 0.667965 7_2:-4574574 Msa1045280:CDS
AGAAGACAAGAGTTCCAACA+GGG 0.668994 7_2:+4573097 None:intergenic
AAAGAATTTGCAAAACCGCG+TGG 0.673930 7_2:+4572650 None:intergenic
TATTAACGATGCATGATCAG+GGG 0.675991 7_2:+4574642 None:intergenic
GGATGGAAAATCTTTCACGT+TGG 0.680385 7_2:-4574530 Msa1045280:CDS
GAATTATAATCGGAGCAATG+AGG 0.685023 7_2:+4574392 None:intergenic
ACCAGCTAGCAGCTTCCACG+CGG 0.698218 7_2:-4572665 Msa1045280:three_prime_UTR
CTGCTGCAGAAGGAGCTGTG+AGG 0.702176 7_2:-4574168 Msa1045280:CDS
TCGGAGGTCACAAACAAGTG+CGG 0.705441 7_2:-4574558 Msa1045280:CDS
TGGCCAGGTTCAATGTACGT+TGG 0.706240 7_2:-4573237 Msa1045280:CDS
GCAGAGAAACAAGCTCATGG+TGG 0.726436 7_2:-4573039 Msa1045280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAAGTTTTTTTTTTTTTT+TGG - chr7_2:4572609-4572628 Msa1045280:three_prime_UTR 10.0%
!!! GTAAGTTTTTTTTTTTTTTT+GGG - chr7_2:4572610-4572629 Msa1045280:three_prime_UTR 10.0%
!!! TTTTATTTAAATCAATTTGA+TGG + chr7_2:4573873-4573892 None:intergenic 10.0%
!! ATAAAAATTAAAAAATCTTG+TGG + chr7_2:4573947-4573966 None:intergenic 10.0%
!!! AAAAATTTATTTTGAAACAT+GGG + chr7_2:4576229-4576248 None:intergenic 10.0%
!!! TAATCAAACTTTTTTTATAT+AGG + chr7_2:4578405-4578424 None:intergenic 10.0%
!!! TTTAATGAACTTTTTATAAC+TGG + chr7_2:4572394-4572413 None:intergenic 15.0%
!!! TTTTATGCTACATATTTTTT+TGG - chr7_2:4573098-4573117 Msa1045280:CDS 15.0%
!!! TTTTCATATATAGTAGAATT+AGG + chr7_2:4573150-4573169 None:intergenic 15.0%
!! TTCATTAAAGAAACTTTATA+AGG - chr7_2:4573179-4573198 Msa1045280:CDS 15.0%
!!! TGTACAAATATTTTAATCAT+TGG + chr7_2:4573918-4573937 None:intergenic 15.0%
!!! ATTTTGAATCTGTAATAAAA+GGG + chr7_2:4574080-4574099 None:intergenic 15.0%
!!! TTTAATGAACTTTTTATAAC+TGG + chr7_2:4572394-4572413 None:intergenic 15.0%
!!! CTGTAAGTTTTTTTTTTTTT+TGG - chr7_2:4572608-4572627 Msa1045280:three_prime_UTR 15.0%
!!! ATTTATTTGTCATGTTTTTT+TGG - chr7_2:4572643-4572662 Msa1045280:three_prime_UTR 15.0%
!!! TTTAATGCTACAAATTTTTT+TGG - chr7_2:4574992-4575011 Msa1045280:intron 15.0%
!!! TTTTCATATATAGTAGATTT+AGG + chr7_2:4575038-4575057 None:intergenic 15.0%
!!! TTTTTCATTAAAGAAACTTT+AGG - chr7_2:4573176-4573195 Msa1045280:CDS 15.0%
!!! AAATCTTTATTTTGAAACAA+GGG + chr7_2:4576070-4576089 None:intergenic 15.0%
!!! AAAATCTTTATTTTGAAACA+AGG + chr7_2:4576071-4576090 None:intergenic 15.0%
!!! CAAAAATTTATTTTGAAACA+TGG + chr7_2:4576230-4576249 None:intergenic 15.0%
!!! AAATCTTTATTTTGAAACAT+GGG + chr7_2:4576388-4576407 None:intergenic 15.0%
!!! AAAATCTTTATTTTGAAACA+TGG + chr7_2:4576071-4576090 None:intergenic 15.0%
!! TAATGTAATAAAGATGTATA+CGG + chr7_2:4576982-4577001 None:intergenic 15.0%
!! AAGCTATAAATATTTAATCA+GGG + chr7_2:4578016-4578035 None:intergenic 15.0%
!!! TTAAATATTTATAGCTTGTT+TGG - chr7_2:4578019-4578038 Msa1045280:intron 15.0%
!!! TACTTTCTAAAGTATAATAA+TGG + chr7_2:4579115-4579134 None:intergenic 15.0%
!! ATCAATATAACACAAATATT+TGG + chr7_2:4579263-4579282 None:intergenic 15.0%
!! TTTGTAGTAATTATTTCATG+TGG - chr7_2:4572852-4572871 Msa1045280:CDS 20.0%
!! AATCAGTTACACAAAAAATT+TGG + chr7_2:4572880-4572899 None:intergenic 20.0%
!! ATATGTAGCATAAAAAAAAC+TGG + chr7_2:4573093-4573112 None:intergenic 20.0%
!! AAATGGAATATTCATTTAAG+TGG + chr7_2:4573305-4573324 None:intergenic 20.0%
!!! GATTTTAACTTTACTCAATT+TGG - chr7_2:4573613-4573632 Msa1045280:intron 20.0%
!! GACAATATATAATATATGCA+AGG + chr7_2:4573676-4573695 None:intergenic 20.0%
!! TCTATAATAAGATCTTAATG+AGG - chr7_2:4573968-4573987 Msa1045280:CDS 20.0%
!!! GATTTTGAATCTGTAATAAA+AGG + chr7_2:4574081-4574100 None:intergenic 20.0%
!! TTTGTAGTAATTATTTCATG+TGG - chr7_2:4572852-4572871 Msa1045280:CDS 20.0%
!! AATCAGTTACACAAAAAATT+TGG + chr7_2:4572880-4572899 None:intergenic 20.0%
!! TTTGTAGCATTAAAAAAAAC+TGG + chr7_2:4574986-4575005 None:intergenic 20.0%
!! AAATGGAATATTCATTTAAG+TGG + chr7_2:4573305-4573324 None:intergenic 20.0%
!!! GATTTTAACTTTACTCAATT+TGG - chr7_2:4573613-4573632 Msa1045280:intron 20.0%
!! ATTAAATCAAAACTTTCTCA+AGG + chr7_2:4575724-4575743 None:intergenic 20.0%
!! TGGACAAAATATTCAAAATA+AGG - chr7_2:4575901-4575920 Msa1045280:intron 20.0%
!! TACATCTTTATTACATTAAG+AGG - chr7_2:4576984-4577003 Msa1045280:intron 20.0%
!!! GTTATATGATTAGTTGTTAT+TGG - chr7_2:4577042-4577061 Msa1045280:intron 20.0%
!! ATGTGTATTCTTATATTTGT+GGG - chr7_2:4577072-4577091 Msa1045280:intron 20.0%
!! AATGACAAAGGAATTATAAT+CGG + chr7_2:4577507-4577526 None:intergenic 20.0%
!! CAAGCTATAAATATTTAATC+AGG + chr7_2:4578017-4578036 None:intergenic 20.0%
!!! TTATTTTCACTTTCTTTTCT+TGG + chr7_2:4578181-4578200 None:intergenic 20.0%
!!! TTATTTGGTTTAAGAAACTT+TGG - chr7_2:4578736-4578755 Msa1045280:intron 20.0%
!!! CTTGCTTTATTAGAAAAAAA+AGG + chr7_2:4579287-4579306 None:intergenic 20.0%
!!! CTTTTTTTTCTAATAAAGCA+AGG - chr7_2:4579285-4579304 Msa1045280:intron 20.0%
!! TGTGTGAAATTTTACCTATT+TGG - chr7_2:4572491-4572510 Msa1045280:three_prime_UTR 25.0%
!! GTGTGAAATTTTACCTATTT+GGG - chr7_2:4572492-4572511 Msa1045280:three_prime_UTR 25.0%
!!! AAGTTTGACTCTTTTTTTGT+TGG - chr7_2:4572692-4572711 Msa1045280:three_prime_UTR 25.0%
!!! AGTTTGACTCTTTTTTTGTT+GGG - chr7_2:4572693-4572712 Msa1045280:three_prime_UTR 25.0%
!!! TGTTACTTTCAATCATAAGA+TGG - chr7_2:4572725-4572744 Msa1045280:three_prime_UTR 25.0%
!! GTTACTTTCAATCATAAGAT+GGG - chr7_2:4572726-4572745 Msa1045280:three_prime_UTR 25.0%
!!! ACTGATTTTTTGAGTATGTT+TGG - chr7_2:4572893-4572912 Msa1045280:CDS 25.0%
! GATTATGTTATGTGCTTATT+TGG + chr7_2:4573042-4573061 None:intergenic 25.0%
!!! TTTTTTTGGTTGATCATTCA+TGG - chr7_2:4573112-4573131 Msa1045280:CDS 25.0%
!!! TTTTTTGGTTGATCATTCAT+GGG - chr7_2:4573113-4573132 Msa1045280:CDS 25.0%
! TTTATAAGGACCATAATATC+TGG - chr7_2:4573193-4573212 Msa1045280:CDS 25.0%
!! ACCATAATATCTGGAATAAA+GGG - chr7_2:4573202-4573221 Msa1045280:CDS 25.0%
!!! GTTGTTTTGTTTCTTCAATA+TGG - chr7_2:4573224-4573243 Msa1045280:CDS 25.0%
! TTCTTCAATATGGAAAAAGA+AGG - chr7_2:4573234-4573253 Msa1045280:CDS 25.0%
! TCTTCAATATGGAAAAAGAA+GGG - chr7_2:4573235-4573254 Msa1045280:CDS 25.0%
!! AAACAGTCAAAAGCATAAAA+AGG + chr7_2:4573405-4573424 None:intergenic 25.0%
! TACAGCATGCTTAAAAAAAA+AGG - chr7_2:4573469-4573488 Msa1045280:intron 25.0%
! AACATGTATACCATTATATC+TGG + chr7_2:4573545-4573564 None:intergenic 25.0%
! ATATAATATATGCAAGGTTC+AGG + chr7_2:4573670-4573689 None:intergenic 25.0%
!!! ACTCAAAACACTTTTTTTTG+TGG - chr7_2:4573727-4573746 Msa1045280:intron 25.0%
! ACAATGCATAATATATGCAA+AGG + chr7_2:4573775-4573794 None:intergenic 25.0%
!! AAAGATGATGAAGATTTTGA+TGG + chr7_2:4574103-4574122 None:intergenic 25.0%
!!! AAACCATCTACTTTTGTATA+GGG + chr7_2:4574206-4574225 None:intergenic 25.0%
!! TGTGTGAAATTTTACCTATT+TGG - chr7_2:4572491-4572510 Msa1045280:three_prime_UTR 25.0%
!! GTGTGAAATTTTACCTATTT+GGG - chr7_2:4572492-4572511 Msa1045280:three_prime_UTR 25.0%
!!! AAGTTTGACTCTTTTTTTGT+TGG - chr7_2:4572692-4572711 Msa1045280:three_prime_UTR 25.0%
!!! AGTTTGACTCTTTTTTTGTT+GGG - chr7_2:4572693-4572712 Msa1045280:three_prime_UTR 25.0%
!! AGTTACTTTCAATCATAAGA+TGG - chr7_2:4574624-4574643 Msa1045280:CDS 25.0%
!!! ACTGATTTTTTGAGTATGTT+TGG - chr7_2:4572893-4572912 Msa1045280:CDS 25.0%
! GATTATGTTATGTGCTTATT+TGG + chr7_2:4573042-4573061 None:intergenic 25.0%
!!! TTTTTTTGGTTGATCATTCA+TGG - chr7_2:4573112-4573131 Msa1045280:CDS 25.0%
!!! TTTTTTGGTTGATCATTCAT+GGG - chr7_2:4573113-4573132 Msa1045280:CDS 25.0%
!! ACCATAATATCTGGAATAAA+GGG - chr7_2:4573202-4573221 Msa1045280:CDS 25.0%
!!! GTTGTTTTGTTTCTTCAATA+TGG - chr7_2:4573224-4573243 Msa1045280:CDS 25.0%
! TTCTTCAATATGGAAAAACA+AGG - chr7_2:4575119-4575138 Msa1045280:intron 25.0%
! TCTTCAATATGGAAAAACAA+GGG - chr7_2:4575120-4575139 Msa1045280:intron 25.0%
!! AAACAGTCAAAAGCATAAAA+AGG + chr7_2:4573405-4573424 None:intergenic 25.0%
! AACATGTATACCATTATATC+TGG + chr7_2:4573545-4573564 None:intergenic 25.0%
!! TTACAGAACTAATCTTCTTT+TGG - chr7_2:4575595-4575614 Msa1045280:intron 25.0%
! TTGATTTAATATGTCACACT+TGG - chr7_2:4575734-4575753 Msa1045280:intron 25.0%
!!! TTTTGGTTTTAGATGTAGTT+TGG - chr7_2:4575874-4575893 Msa1045280:intron 25.0%
!! AATGTTGTGTTACTAAATAG+AGG - chr7_2:4575954-4575973 Msa1045280:intron 25.0%
!! AATGTAGTGTTGTTAAATAG+TGG - chr7_2:4576273-4576292 Msa1045280:intron 25.0%
!!! TTTATTTTGAAACATGGGAT+TGG + chr7_2:4576224-4576243 None:intergenic 25.0%
! TATTCCTAATACAAGAAAGT+TGG - chr7_2:4576619-4576638 Msa1045280:intron 25.0%
! ATTCCTAATACAAGAAAGTT+GGG - chr7_2:4576620-4576639 Msa1045280:intron 25.0%
! ACTATAAGAAATCAGTACTA+GGG + chr7_2:4576851-4576870 None:intergenic 25.0%
! AACTATAAGAAATCAGTACT+AGG + chr7_2:4576852-4576871 None:intergenic 25.0%
! ATCATATAACTTGAACAACA+AGG + chr7_2:4577032-4577051 None:intergenic 25.0%
! GATGTGTATTCTTATATTTG+TGG - chr7_2:4577071-4577090 Msa1045280:intron 25.0%
! TGAAGTAATATTAAGTGAGT+TGG - chr7_2:4577608-4577627 Msa1045280:CDS 25.0%
!! CTTTGATTAAAGCAGATTTT+TGG - chr7_2:4577793-4577812 Msa1045280:intron 25.0%
!! CAATACAAAGAAAGTTTTCA+TGG + chr7_2:4578128-4578147 None:intergenic 25.0%
! AATTAAGCTGTTTATCCAAA+AGG - chr7_2:4578483-4578502 Msa1045280:intron 25.0%
! TCTTGTCAAAATTTCTAACA+TGG - chr7_2:4578512-4578531 Msa1045280:intron 25.0%
! TCTTAAACCAAATAATTCAG+AGG + chr7_2:4578731-4578750 None:intergenic 25.0%
!!! ATATGAATATGTTTTGAGTG+TGG - chr7_2:4579182-4579201 Msa1045280:intron 25.0%
! CAGTGTTCATAGTAATAAAA+GGG + chr7_2:4579369-4579388 None:intergenic 25.0%
! TCAGTGTTCATAGTAATAAA+AGG + chr7_2:4579370-4579389 None:intergenic 25.0%
GCTGGTATAGGATATTTATT+TGG - chr7_2:4572358-4572377 Msa1045280:three_prime_UTR 30.0%
!! CAAAAACAACTTGCTATGTT+AGG - chr7_2:4572421-4572440 Msa1045280:three_prime_UTR 30.0%
! TCTTTGAATCTTGTTGGTTA+TGG - chr7_2:4572535-4572554 Msa1045280:three_prime_UTR 30.0%
AAAAAACTTACAGCCCATAA+AGG + chr7_2:4572601-4572620 None:intergenic 30.0%
!!! GTTTGACTCTTTTTTTGTTG+GGG - chr7_2:4572694-4572713 Msa1045280:three_prime_UTR 30.0%
! GACCATAATATCTGGAATAA+AGG - chr7_2:4573201-4573220 Msa1045280:CDS 30.0%
ACCCTTTATTCCAGATATTA+TGG + chr7_2:4573206-4573225 None:intergenic 30.0%
ACTTTAAATCTAACAGTGAC+AGG - chr7_2:4573258-4573277 Msa1045280:CDS 30.0%
CAAGATTGAGAAAAGAGAAA+TGG + chr7_2:4573322-4573341 None:intergenic 30.0%
! CATTTCTCTTTTCTCAATCT+TGG - chr7_2:4573320-4573339 Msa1045280:CDS 30.0%
!! TCACTTATTTTTCCACATGA+TGG - chr7_2:4573360-4573379 Msa1045280:intron 30.0%
! ATCTATTTGTTACCATCATG+TGG + chr7_2:4573375-4573394 None:intergenic 30.0%
AAAAGGAGAATGTGAAAGAA+TGG - chr7_2:4573486-4573505 Msa1045280:intron 30.0%
! AATTTTCCCTCCAGATATAA+TGG - chr7_2:4573532-4573551 Msa1045280:intron 30.0%
TGTATACCATTATATCTGGA+GGG + chr7_2:4573541-4573560 None:intergenic 30.0%
ATGTATACCATTATATCTGG+AGG + chr7_2:4573542-4573561 None:intergenic 30.0%
ACTTTACTCAATTTGGTTGT+TGG - chr7_2:4573620-4573639 Msa1045280:intron 30.0%
TGCAAACTAAACTAAACTCA+TGG - chr7_2:4573698-4573717 Msa1045280:intron 30.0%
GCAAACTAAACTAAACTCAT+GGG - chr7_2:4573699-4573718 Msa1045280:intron 30.0%
CAAACTAAACTAAACTCATG+GGG - chr7_2:4573700-4573719 Msa1045280:intron 30.0%
TGAATCTGTAATAAAAGGGT+TGG + chr7_2:4574076-4574095 None:intergenic 30.0%
TAACCCTATACAAAAGTAGA+TGG - chr7_2:4574200-4574219 Msa1045280:CDS 30.0%
!! CAAACCATCTACTTTTGTAT+AGG + chr7_2:4574207-4574226 None:intergenic 30.0%
!!! AGTAGATGGTTTGTTTTTGT+AGG - chr7_2:4574214-4574233 Msa1045280:CDS 30.0%
GCTGGTATAGGATATTTATT+TGG - chr7_2:4572358-4572377 Msa1045280:three_prime_UTR 30.0%
!! CAAAAACAACTTGCTATGTT+AGG - chr7_2:4572421-4572440 Msa1045280:three_prime_UTR 30.0%
!!! GATTGTGTTGGTTTTTTAAC+TGG - chr7_2:4574364-4574383 Msa1045280:CDS 30.0%
! TCTTTGAATCTTGTTGGTTA+TGG - chr7_2:4572535-4572554 Msa1045280:three_prime_UTR 30.0%
AAAAAACTTACAGCCCATAA+AGG + chr7_2:4572601-4572620 None:intergenic 30.0%
!!! GTTTGACTCTTTTTTTGTTG+GGG - chr7_2:4572694-4572713 Msa1045280:three_prime_UTR 30.0%
CTATGAATTTCGTGAAATCA+CGG - chr7_2:4574819-4574838 Msa1045280:intron 30.0%
CAATGAGTTTGACAAAATCA+CGG + chr7_2:4574907-4574926 None:intergenic 30.0%
!! AACTTTAGGACCATAATATC+TGG - chr7_2:4575078-4575097 Msa1045280:intron 30.0%
! GACCATAATATCTGGAATAA+AGG - chr7_2:4573201-4573220 Msa1045280:CDS 30.0%
ACCCTTTATTCCAGATATTA+TGG + chr7_2:4573206-4573225 None:intergenic 30.0%
ACTTTAAATCTAACAGTGAC+AGG - chr7_2:4573258-4573277 Msa1045280:CDS 30.0%
CAAGATTGAGAAAAGAGAAA+TGG + chr7_2:4573322-4573341 None:intergenic 30.0%
! CATTTCTCTTTTCTCAATCT+TGG - chr7_2:4573320-4573339 Msa1045280:CDS 30.0%
!! TCACTTATTTTTCCACATGA+TGG - chr7_2:4573360-4573379 Msa1045280:intron 30.0%
! ATCTATTTGTTACCATCATG+TGG + chr7_2:4573375-4573394 None:intergenic 30.0%
TACAGCATGCTTAAAAAAAG+AGG - chr7_2:4575360-4575379 Msa1045280:intron 30.0%
! AATTTTCCCTCCAGATATAA+TGG - chr7_2:4573532-4573551 Msa1045280:intron 30.0%
TGTATACCATTATATCTGGA+GGG + chr7_2:4573541-4573560 None:intergenic 30.0%
ATGTATACCATTATATCTGG+AGG + chr7_2:4573542-4573561 None:intergenic 30.0%
ACTTTACTCAATTTGGTTGT+TGG - chr7_2:4573620-4573639 Msa1045280:intron 30.0%
TGTGACATGATACTAAATCT+TGG - chr7_2:4575565-4575584 Msa1045280:intron 30.0%
! AGAACCAAGATACAACTTTT+AGG + chr7_2:4575770-4575789 None:intergenic 30.0%
!! TCTTGGTTCTACTTTATGTT+TGG - chr7_2:4575780-4575799 Msa1045280:intron 30.0%
!! ATGCTAATAAATTTTGGGGA+AGG - chr7_2:4575835-4575854 Msa1045280:intron 30.0%
AACACTACACAAATTGCATA+TGG + chr7_2:4576496-4576515 None:intergenic 30.0%
! TAAACATGGATTGTGACTTA+TGG + chr7_2:4576540-4576559 None:intergenic 30.0%
CACAATCCATGTTTATATTG+TGG - chr7_2:4576545-4576564 Msa1045280:intron 30.0%
GAAAGTCCACAATATAAACA+TGG + chr7_2:4576554-4576573 None:intergenic 30.0%
AATACCTACAATGTTGTCAT+TGG + chr7_2:4576603-4576622 None:intergenic 30.0%
ATGTTGCAAGTGTATATTTG+AGG - chr7_2:4576930-4576949 Msa1045280:intron 30.0%
CTTATATTTGTGGGAACAAA+TGG - chr7_2:4577081-4577100 Msa1045280:intron 30.0%
ATATTAACGATGCATGATCA+GGG + chr7_2:4577248-4577267 None:intergenic 30.0%
AATATTAACGATGCATGATC+AGG + chr7_2:4577249-4577268 None:intergenic 30.0%
TCATGCATCGTTAATATTCA+TGG - chr7_2:4577251-4577270 Msa1045280:intron 30.0%
TTAATATTCATGGTTGCTGT+TGG - chr7_2:4577261-4577280 Msa1045280:intron 30.0%
!! AAATCTTTCACGTTGGTTTA+TGG - chr7_2:4577363-4577382 Msa1045280:intron 30.0%
ATTCCTTTGTCATTAACCTT+CGG - chr7_2:4577513-4577532 Msa1045280:CDS 30.0%
TTGACTGTAATTGACAATCT+CGG - chr7_2:4577855-4577874 Msa1045280:intron 30.0%
AAAGTTCCAAATACTGATCA+TGG + chr7_2:4577928-4577947 None:intergenic 30.0%
! ATCAGTATTTGGAACTTTCT+TGG - chr7_2:4577930-4577949 Msa1045280:intron 30.0%
TGGTTTCCTATATAGAACTT+CGG + chr7_2:4578108-4578127 None:intergenic 30.0%
!! CTTGGTTCAAAGTTTTGTAT+AGG + chr7_2:4578163-4578182 None:intergenic 30.0%
!! ATGATGCTATATTCAGGTTT+TGG + chr7_2:4578873-4578892 None:intergenic 30.0%
ATACGAATGATGCTATATTC+AGG + chr7_2:4578879-4578898 None:intergenic 30.0%
TAGCATAAACAATCCTTGTT+CGG + chr7_2:4579023-4579042 None:intergenic 30.0%
! ATTGTTTATGCTAGCTTGTA+TGG - chr7_2:4579030-4579049 Msa1045280:intron 30.0%
!! GATTTTTGGACCAAGTATTT+TGG - chr7_2:4579086-4579105 Msa1045280:intron 30.0%
!! ATAATGGACACCAAAATACT+TGG + chr7_2:4579099-4579118 None:intergenic 30.0%
!! CTTTAGAAAGTATTTGTAGC+TGG - chr7_2:4579123-4579142 Msa1045280:intron 30.0%
! TTTTAGCATAACCACTGATA+AGG + chr7_2:4579400-4579419 None:intergenic 30.0%
!!! GATGCTGTTGGTTTTTTAAC+TGG - chr7_2:4572463-4572482 Msa1045280:three_prime_UTR 35.0%
AAGTTCCTGTTCTTCCTTTA+TGG - chr7_2:4572584-4572603 Msa1045280:three_prime_UTR 35.0%
AGTTCCTGTTCTTCCTTTAT+GGG - chr7_2:4572585-4572604 Msa1045280:three_prime_UTR 35.0%
! TACCATCATCATCGTGATTT+TGG + chr7_2:4572981-4573000 None:intergenic 35.0%
TAAATCTAACAGTGACAGGA+AGG - chr7_2:4573262-4573281 Msa1045280:CDS 35.0%
CATGCTGTAAATCATTACAC+TGG + chr7_2:4573458-4573477 None:intergenic 35.0%
!!! ACACTTTTTTTTGTGGTGTC+CGG - chr7_2:4573734-4573753 Msa1045280:intron 35.0%
!!! TTGTTTTTGTAGGAGCAATG+TGG - chr7_2:4574224-4574243 Msa1045280:CDS 35.0%
AGCAATGTGGTTACAATCAT+GGG - chr7_2:4574237-4574256 Msa1045280:CDS 35.0%
AAAAACCAACACAATCACCA+AGG + chr7_2:4574360-4574379 None:intergenic 35.0%
AAGTTCCTGTTCTTCCTTTA+TGG - chr7_2:4572584-4572603 Msa1045280:three_prime_UTR 35.0%
AGTTCCTGTTCTTCCTTTAT+GGG - chr7_2:4572585-4572604 Msa1045280:three_prime_UTR 35.0%
! AACTTTTGCCAAAATCACGA+TGG - chr7_2:4572970-4572989 Msa1045280:CDS 35.0%
TAAATCTAACAGTGACAGGA+AGG - chr7_2:4573262-4573281 Msa1045280:CDS 35.0%
CATGCTGTAAATCATTACAC+TGG + chr7_2:4573458-4573477 None:intergenic 35.0%
AAGAGGTGAATGTGAAAGAA+TGG - chr7_2:4575377-4575396 Msa1045280:intron 35.0%
AGCATCCGCCATTATTAAAA+GGG + chr7_2:4575820-4575839 None:intergenic 35.0%
TAGCATCCGCCATTATTAAA+AGG + chr7_2:4575821-4575840 None:intergenic 35.0%
!! TGGCGGATGCTAATAAATTT+TGG - chr7_2:4575829-4575848 Msa1045280:intron 35.0%
! GGCGGATGCTAATAAATTTT+GGG - chr7_2:4575830-4575849 Msa1045280:intron 35.0%
! GCGGATGCTAATAAATTTTG+GGG - chr7_2:4575831-4575850 Msa1045280:intron 35.0%
!!! TGGTTTTAGATGTAGTTTGG+TGG - chr7_2:4575877-4575896 Msa1045280:intron 35.0%
! TTTAGATGTAGTTTGGTGGT+TGG - chr7_2:4575881-4575900 Msa1045280:intron 35.0%
AACACAACATTCATGTGATC+AGG + chr7_2:4575945-4575964 None:intergenic 35.0%
! GTGTTGTTAAATAGTAGCCA+TGG - chr7_2:4576121-4576140 Msa1045280:intron 35.0%
AAATAGTAGCCATGGTAGAA+TGG - chr7_2:4576129-4576148 Msa1045280:intron 35.0%
AAACATGGGATTGTGACTTA+TGG + chr7_2:4576215-4576234 None:intergenic 35.0%
! GAAACATGGGATTGGTATTA+TGG + chr7_2:4576375-4576394 None:intergenic 35.0%
AACACTACTTTCATGTACTC+AGG + chr7_2:4576424-4576443 None:intergenic 35.0%
TTGTTAAATAGCAGCCATGA+TGG - chr7_2:4576442-4576461 Msa1045280:intron 35.0%
ACTACACAAATTGCATATGG+AGG + chr7_2:4576493-4576512 None:intergenic 35.0%
CTACCCAACTTTCTTGTATT+AGG + chr7_2:4576626-4576645 None:intergenic 35.0%
! TTTAAGTCGCTGTTTCGAAA+GGG + chr7_2:4576667-4576686 None:intergenic 35.0%
CAAAGAAACTGTGTTGAAGT+AGG + chr7_2:4577112-4577131 None:intergenic 35.0%
CTACTTCAACACAGTTTCTT+TGG - chr7_2:4577110-4577129 Msa1045280:intron 35.0%
TTCAAAATTTCCCGAAAAGC+CGG - chr7_2:4577142-4577161 Msa1045280:intron 35.0%
TATTAACGATGCATGATCAG+GGG + chr7_2:4577247-4577266 None:intergenic 35.0%
ATGTTCATTGTTAGACCTGT+CGG - chr7_2:4577309-4577328 Msa1045280:intron 35.0%
TTATGGTGTATGTCTCTTGT+TGG - chr7_2:4577380-4577399 Msa1045280:intron 35.0%
! TTGTTGGCTGCTTATTTGAT+GGG - chr7_2:4577396-4577415 Msa1045280:intron 35.0%
TGCTTATTTGATGGGAGTTA+TGG - chr7_2:4577404-4577423 Msa1045280:CDS 35.0%
GAATTATAATCGGAGCAATG+AGG + chr7_2:4577497-4577516 None:intergenic 35.0%
GTAAAATCTTCTCCTCTATG+TGG + chr7_2:4577762-4577781 None:intergenic 35.0%
TTTAATCAAAGCTTGCGTCA+AGG + chr7_2:4577784-4577803 None:intergenic 35.0%
! TTGGCTTCTTTTCATTTCCA+TGG - chr7_2:4577812-4577831 Msa1045280:intron 35.0%
! CTTTTCATTTCCATGGTCTT+AGG - chr7_2:4577819-4577838 Msa1045280:intron 35.0%
CTATATAGAACTTCGGAAAC+AGG + chr7_2:4578101-4578120 None:intergenic 35.0%
CTGTTTCCGAAGTTCTATAT+AGG - chr7_2:4578099-4578118 Msa1045280:intron 35.0%
TAAACACTTGTGAGGTTGTT+TGG - chr7_2:4578286-4578305 Msa1045280:intron 35.0%
AAACACTTGTGAGGTTGTTT+GGG - chr7_2:4578287-4578306 Msa1045280:intron 35.0%
! TTGACAAGATTATCGCCTTT+TGG + chr7_2:4578501-4578520 None:intergenic 35.0%
TTTCAACTAGCTATGACTGT+TGG - chr7_2:4578604-4578623 Msa1045280:intron 35.0%
! ACTGTTGGTCATCTTTTCAT+TGG - chr7_2:4578619-4578638 Msa1045280:intron 35.0%
! TTACTAGTTGGACTTGGTTA+CGG - chr7_2:4578676-4578695 Msa1045280:intron 35.0%
CAAAAATCACAGATCATCGA+AGG + chr7_2:4579074-4579093 None:intergenic 35.0%
! CTTCGATGATCTGTGATTTT+TGG - chr7_2:4579072-4579091 Msa1045280:intron 35.0%
TTTGAGTGTGGAAAACCAAA+TGG - chr7_2:4579194-4579213 Msa1045280:intron 35.0%
GTTTCTCCACTTGTTCTATA+GGG - chr7_2:4579326-4579345 Msa1045280:CDS 35.0%
GAATTTCCCTATAGAACAAG+TGG + chr7_2:4579335-4579354 None:intergenic 35.0%
CTGAAATTTGTCCTTATCAG+TGG - chr7_2:4579386-4579405 Msa1045280:CDS 35.0%
!! TTACAATCATGGGCTGGTAT+AGG - chr7_2:4572346-4572365 Msa1045280:three_prime_UTR 40.0%
! TTAGGTGTTGCAAAAGACCT+TGG - chr7_2:4572439-4572458 Msa1045280:three_prime_UTR 40.0%
AAAAACCAACAGCATCACCA+AGG + chr7_2:4572459-4572478 None:intergenic 40.0%
GGAGCTTCTTTGAATCTTGT+TGG - chr7_2:4572529-4572548 Msa1045280:three_prime_UTR 40.0%
! TGAATCTTGTTGGTTATGGC+TGG - chr7_2:4572539-4572558 Msa1045280:three_prime_UTR 40.0%
! GAATCTTGTTGGTTATGGCT+GGG - chr7_2:4572540-4572559 Msa1045280:three_prime_UTR 40.0%
TGCCAAAATCACGATGATGA+TGG - chr7_2:4572976-4572995 Msa1045280:CDS 40.0%
GGTTTGACAATGAGTTTGAC+AGG + chr7_2:4573021-4573040 None:intergenic 40.0%
!!! CACTTTTTTTTGTGGTGTCC+GGG - chr7_2:4573735-4573754 Msa1045280:intron 40.0%
AGAGGGATTTGTATATGAGC+TGG + chr7_2:4574010-4574029 None:intergenic 40.0%
GAGCAATGTGGTTACAATCA+TGG - chr7_2:4574236-4574255 Msa1045280:CDS 40.0%
!! TTACAATCATGGGCTGGTAT+AGG - chr7_2:4572346-4572365 Msa1045280:three_prime_UTR 40.0%
! TTAGGTGTTGCAAAAGACCT+TGG - chr7_2:4572439-4572458 Msa1045280:three_prime_UTR 40.0%
! AAAGACCTTGGTGATTGTGT+TGG - chr7_2:4574352-4574371 Msa1045280:CDS 40.0%
GGAGCTTCTTTGAATCTTGT+TGG - chr7_2:4572529-4572548 Msa1045280:three_prime_UTR 40.0%
! TGAATCTTGTTGGTTATGGC+TGG - chr7_2:4572539-4572558 Msa1045280:three_prime_UTR 40.0%
! GAATCTTGTTGGTTATGGCT+GGG - chr7_2:4572540-4572559 Msa1045280:three_prime_UTR 40.0%
ATCATGTCACATGCTCACAT+GGG + chr7_2:4575556-4575575 None:intergenic 40.0%
TATCATGTCACATGCTCACA+TGG + chr7_2:4575557-4575576 None:intergenic 40.0%
ATATGTCACACTTGGCAACA+TGG - chr7_2:4575742-4575761 Msa1045280:intron 40.0%
GGCACCTAAAAGTTGTATCT+TGG - chr7_2:4575763-4575782 Msa1045280:intron 40.0%
CATCCGCCATTATTAAAAGG+GGG + chr7_2:4575818-4575837 None:intergenic 40.0%
GCATCCGCCATTATTAAAAG+GGG + chr7_2:4575819-4575838 None:intergenic 40.0%
AAATAGAGGCCATAGCAGAA+TGG - chr7_2:4575968-4575987 Msa1045280:intron 40.0%
! TTGTTAAGCGTCACTTTCCT+TGG - chr7_2:4576025-4576044 Msa1045280:intron 40.0%
! AGTTTGTTTGACGTGAGCAA+AGG - chr7_2:4576250-4576269 Msa1045280:intron 40.0%
! GTGTTGTTAAATAGTGGCCA+TGG - chr7_2:4576279-4576298 Msa1045280:intron 40.0%
! AAATAGCAGCCATGATGGAA+TGG - chr7_2:4576447-4576466 Msa1045280:intron 40.0%
! AGATGACGGTTTATTGAGGA+TGG + chr7_2:4576579-4576598 None:intergenic 40.0%
ATGTTGTCATTGGCAGATGA+CGG + chr7_2:4576593-4576612 None:intergenic 40.0%
TCTGCCAATGACAACATTGT+AGG - chr7_2:4576596-4576615 Msa1045280:intron 40.0%
CGAAAGGGATAACTGGATAA+GGG + chr7_2:4576652-4576671 None:intergenic 40.0%
TCGAAAGGGATAACTGGATA+AGG + chr7_2:4576653-4576672 None:intergenic 40.0%
! GTTTAAGTCGCTGTTTCGAA+AGG + chr7_2:4576668-4576687 None:intergenic 40.0%
TGACACAACACTGATACATG+TGG + chr7_2:4576763-4576782 None:intergenic 40.0%
TGACACATCAATGAGAGTGA+TGG + chr7_2:4576908-4576927 None:intergenic 40.0%
TCAAAATTTCCCGAAAAGCC+GGG - chr7_2:4577143-4577162 Msa1045280:intron 40.0%
! TCCCGTGGTTGGAATTTTAA+AGG - chr7_2:4577167-4577186 Msa1045280:intron 40.0%
!! CCCTTTAAAATTCCAACCAC+GGG + chr7_2:4577171-4577190 None:intergenic 40.0%
! CCCGTGGTTGGAATTTTAAA+GGG - chr7_2:4577168-4577187 Msa1045280:intron 40.0%
!! GCCCTTTAAAATTCCAACCA+CGG + chr7_2:4577172-4577191 None:intergenic 40.0%
!! GGAATTTTAAAGGGCTTTGC+TGG - chr7_2:4577177-4577196 Msa1045280:intron 40.0%
! GTGAAAGATTTTCCATCCGA+CGG + chr7_2:4577354-4577373 None:intergenic 40.0%
GGATGGAAAATCTTTCACGT+TGG - chr7_2:4577356-4577375 Msa1045280:intron 40.0%
! CTTGTTGGCTGCTTATTTGA+TGG - chr7_2:4577395-4577414 Msa1045280:intron 40.0%
GAGCAATGAGGATCAAAAAG+AGG + chr7_2:4577485-4577504 None:intergenic 40.0%
TGAGATTGTCCTTCTGTTTC+TGG + chr7_2:4577576-4577595 None:intergenic 40.0%
! ATTTCCATGGTCTTAGGTTC+TGG - chr7_2:4577825-4577844 Msa1045280:intron 40.0%
CATTGTCATATCCCAAAGAC+TGG + chr7_2:4577890-4577909 None:intergenic 40.0%
TCGTCTCCATGATCAGTATT+TGG - chr7_2:4577919-4577938 Msa1045280:intron 40.0%
AGAAAATCGATTGAGCCCTT+AGG - chr7_2:4578235-4578254 Msa1045280:intron 40.0%
GCTCAAATAAGCCAACCTAA+GGG + chr7_2:4578253-4578272 None:intergenic 40.0%
AGCTCAAATAAGCCAACCTA+AGG + chr7_2:4578254-4578273 None:intergenic 40.0%
TACGAGCATAAACACTTGTG+AGG - chr7_2:4578278-4578297 Msa1045280:intron 40.0%
CTTATTTCCTTGAGCTCTCT+AGG - chr7_2:4578355-4578374 Msa1045280:intron 40.0%
! TGGTCATCTTTTCATTGGCA+TGG - chr7_2:4578624-4578643 Msa1045280:intron 40.0%
! GGTCATCTTTTCATTGGCAT+GGG - chr7_2:4578625-4578644 Msa1045280:intron 40.0%
! ATCTTTTCATTGGCATGGGA+TGG - chr7_2:4578629-4578648 Msa1045280:intron 40.0%
TACGTTGGCACTTTACTAGT+TGG - chr7_2:4578664-4578683 Msa1045280:intron 40.0%
AATAATTCAGAGGCTGTAGC+TGG + chr7_2:4578721-4578740 None:intergenic 40.0%
GCTACAGCCTCTGAATTATT+TGG - chr7_2:4578721-4578740 Msa1045280:intron 40.0%
AGAAGACAAGAGTTCCAACA+GGG + chr7_2:4578792-4578811 None:intergenic 40.0%
TCTCTAGTCTCATTGCTAGT+AGG - chr7_2:4578809-4578828 Msa1045280:intron 40.0%
GTATCTAGTGCGCTTAATGT+TGG - chr7_2:4578895-4578914 Msa1045280:intron 40.0%
TGCTAGCTGGTAAATCCATT+TGG + chr7_2:4579212-4579231 None:intergenic 40.0%
AAAGAATTTGCAAAACCGCG+TGG + chr7_2:4579239-4579258 None:intergenic 40.0%
GGTTTCTCCACTTGTTCTAT+AGG - chr7_2:4579325-4579344 Msa1045280:CDS 40.0%
ATGTGGTTACAATCATGGGC+TGG - chr7_2:4572340-4572359 Msa1045280:three_prime_UTR 45.0%
!! AAAGACCTTGGTGATGCTGT+TGG - chr7_2:4572451-4572470 Msa1045280:three_prime_UTR 45.0%
ACAAGTAACGCAGCCCAAAT+AGG + chr7_2:4572508-4572527 None:intergenic 45.0%
ATTTGGGCTGCGTTACTTGT+TGG - chr7_2:4572508-4572527 Msa1045280:three_prime_UTR 45.0%
! TTGTTGGTTATGGCTGGGTT+TGG - chr7_2:4572545-4572564 Msa1045280:three_prime_UTR 45.0%
ACAGCCCATAAAGGAAGAAC+AGG + chr7_2:4572592-4572611 None:intergenic 45.0%
! CAATTTGGTTGTTGGCTGTG+TGG - chr7_2:4573628-4573647 Msa1045280:intron 45.0%
AAGGTCGTGAGTTCAAATCC+CGG + chr7_2:4573756-4573775 None:intergenic 45.0%
AACTTAGCTCAGTTGGCAGT+TGG + chr7_2:4573803-4573822 None:intergenic 45.0%
TGGATGTTGTTGACGAAGGA+GGG + chr7_2:4574056-4574075 None:intergenic 45.0%
TTGGATGTTGTTGACGAAGG+AGG + chr7_2:4574057-4574076 None:intergenic 45.0%
ATGTGGTTACAATCATGGGC+TGG - chr7_2:4572340-4572359 Msa1045280:three_prime_UTR 45.0%
ACAAGCAAAGCAGCCCAAAT+AGG + chr7_2:4574409-4574428 None:intergenic 45.0%
! ATTTGGGCTGCTTTGCTTGT+TGG - chr7_2:4574409-4574428 Msa1045280:CDS 45.0%
! TTGTTGGTTATGGCTGGGTT+TGG - chr7_2:4572545-4572564 Msa1045280:three_prime_UTR 45.0%
ACAGCCCATAAAGGAAGAAC+AGG + chr7_2:4572592-4572611 None:intergenic 45.0%
TGCCAAAATCACGATGGTGA+CGG - chr7_2:4574874-4574893 Msa1045280:intron 45.0%
! TACCGTCACCATCGTGATTT+TGG + chr7_2:4574879-4574898 None:intergenic 45.0%
! GCAGTGCCCCCTTTTAATAA+TGG - chr7_2:4575809-4575828 Msa1045280:intron 45.0%
! GTGCCCCCTTTTAATAATGG+CGG - chr7_2:4575812-4575831 Msa1045280:intron 45.0%
GCTTAACAAATTGCCTGTGG+TGG + chr7_2:4576014-4576033 None:intergenic 45.0%
GACGCTTAACAAATTGCCTG+TGG + chr7_2:4576017-4576036 None:intergenic 45.0%
! TTAAGCGTCACTTTCCTTGG+CGG - chr7_2:4576028-4576047 Msa1045280:intron 45.0%
! TTTGACTTATAGCACCGCCA+AGG + chr7_2:4576045-4576064 None:intergenic 45.0%
AAATAGTGGCCATGGCGAAA+TGG - chr7_2:4576287-4576306 Msa1045280:intron 45.0%
! GCTTCACAAAGTGCTCACAA+CGG + chr7_2:4576333-4576352 None:intergenic 45.0%
CACAAATTGCATATGGAGGC+TGG + chr7_2:4576489-4576508 None:intergenic 45.0%
TGTGACTTATGGCGCTAACA+TGG + chr7_2:4576529-4576548 None:intergenic 45.0%
! TGGCAGATGACGGTTTATTG+AGG + chr7_2:4576583-4576602 None:intergenic 45.0%
! GCTGTTTCGAAAGGGATAAC+TGG + chr7_2:4576659-4576678 None:intergenic 45.0%
TGTCAAACACTGACACGTGT+CGG - chr7_2:4576778-4576797 Msa1045280:intron 45.0%
ATCAGTACTAGGGACAACCT+GGG + chr7_2:4576841-4576860 None:intergenic 45.0%
AATCAGTACTAGGGACAACC+TGG + chr7_2:4576842-4576861 None:intergenic 45.0%
CAAAATTTCCCGAAAAGCCG+GGG - chr7_2:4577144-4577163 Msa1045280:intron 45.0%
AGACCTATTCCTACCAATGC+TGG + chr7_2:4577288-4577307 None:intergenic 45.0%
TTCATTGTTAGACCTGTCGG+AGG - chr7_2:4577312-4577331 Msa1045280:intron 45.0%
!! AGAAGTGCTTCTTCCTCTAG+AGG + chr7_2:4577552-4577571 None:intergenic 45.0%
GCACTTCTTCCAGAAACAGA+AGG - chr7_2:4577564-4577583 Msa1045280:CDS 45.0%
GTTGGAAGATGAGAAGCCTA+AGG - chr7_2:4577626-4577645 Msa1045280:CDS 45.0%
AGATGAGAAGCCTAAGGAAG+TGG - chr7_2:4577632-4577651 Msa1045280:CDS 45.0%
AGATCCAGAACCTAAGACCA+TGG + chr7_2:4577832-4577851 None:intergenic 45.0%
!! ATGGTCTTAGGTTCTGGATC+TGG - chr7_2:4577831-4577850 Msa1045280:intron 45.0%
!! TGGTCTTAGGTTCTGGATCT+GGG - chr7_2:4577832-4577851 Msa1045280:intron 45.0%
TGGAACTTTCTTGGACGTGT+TGG - chr7_2:4577939-4577958 Msa1045280:intron 45.0%
AACTTTCTTGGACGTGTTGG+AGG - chr7_2:4577942-4577961 Msa1045280:intron 45.0%
AATCGATTGAGCCCTTAGGT+TGG - chr7_2:4578239-4578258 Msa1045280:intron 45.0%
ATTTCCTTGAGCTCTCTAGG+AGG - chr7_2:4578358-4578377 Msa1045280:intron 45.0%
! TTTCCTTGAGCTCTCTAGGA+GGG - chr7_2:4578359-4578378 Msa1045280:intron 45.0%
! TCCGATGTGTTTTACTGAGC+AGG - chr7_2:4578545-4578564 Msa1045280:intron 45.0%
CCCTGCTCAGTAAAACACAT+CGG + chr7_2:4578549-4578568 None:intergenic 45.0%
! CCGATGTGTTTTACTGAGCA+GGG - chr7_2:4578546-4578565 Msa1045280:intron 45.0%
TGAAATGCAGCTAATGCAGC+TGG + chr7_2:4578589-4578608 None:intergenic 45.0%
GGCACTTTACTAGTTGGACT+TGG - chr7_2:4578670-4578689 Msa1045280:intron 45.0%
ACTTGGTTACGGTGCTCATT+GGG - chr7_2:4578687-4578706 Msa1045280:intron 45.0%
ATCACTCTAGCAAACCCTGT+TGG - chr7_2:4578775-4578794 Msa1045280:intron 45.0%
GAGAAGACAAGAGTTCCAAC+AGG + chr7_2:4578793-4578812 None:intergenic 45.0%
GAAGCAGAGAAACAAGCTCA+TGG - chr7_2:4578844-4578863 Msa1045280:intron 45.0%
CATATGGAACCTTCGCACTT+TGG + chr7_2:4578928-4578947 None:intergenic 45.0%
! GGATGTCAGGAAGAAGCATA+TGG + chr7_2:4578944-4578963 None:intergenic 45.0%
CTTCCTGACATCCACTATCA+TGG - chr7_2:4578951-4578970 Msa1045280:intron 45.0%
GCATAATCCTGCCATGATAG+TGG + chr7_2:4578965-4578984 None:intergenic 45.0%
GGCAGGATTATGCATTGTTG+CGG - chr7_2:4578972-4578991 Msa1045280:intron 45.0%
GATTATGCATTGTTGCGGCA+GGG - chr7_2:4578977-4578996 Msa1045280:intron 45.0%
TGTTTCTCGTGTTCCGAACA+AGG - chr7_2:4579007-4579026 Msa1045280:intron 45.0%
AGCAAGGCAAATTTGACACC+AGG - chr7_2:4579301-4579320 Msa1045280:CDS 45.0%
AAGGCAAATTTGACACCAGG+AGG - chr7_2:4579304-4579323 Msa1045280:CDS 45.0%
! TTTGGTTGTTGGCTGTGTGG+TGG - chr7_2:4573631-4573650 Msa1045280:intron 50.0%
CCACGTGAACTTAGCTCAGT+TGG + chr7_2:4573810-4573829 None:intergenic 50.0%
CCAACTGAGCTAAGTTCACG+TGG - chr7_2:4573807-4573826 Msa1045280:intron 50.0%
TGTTGTTGACGAAGGAGGGA+GGG + chr7_2:4574052-4574071 None:intergenic 50.0%
ATGTTGTTGACGAAGGAGGG+AGG + chr7_2:4574053-4574072 None:intergenic 50.0%
GGGTTGGATGTTGTTGACGA+AGG + chr7_2:4574060-4574079 None:intergenic 50.0%
TTGGGGAAGGCTTCTGATCT+AGG - chr7_2:4575848-4575867 Msa1045280:intron 50.0%
! GCTTCTGATCTAGGCGGTTT+TGG - chr7_2:4575857-4575876 Msa1045280:intron 50.0%
GATTTCGTTACAGCCACCAC+AGG - chr7_2:4575998-4576017 Msa1045280:intron 50.0%
GTAGCCATGGTAGAATGGTG+TGG - chr7_2:4576134-4576153 Msa1045280:intron 50.0%
! TGAAGCGCCACTTGTCATAG+CGG - chr7_2:4576347-4576366 Msa1045280:intron 50.0%
!! TATGGTGCCGCTATGACAAG+TGG + chr7_2:4576357-4576376 None:intergenic 50.0%
TATGCCACGCCATTCCATCA+TGG + chr7_2:4576459-4576478 None:intergenic 50.0%
ACTCCTTCAATCCGAGGACT+TGG - chr7_2:4576810-4576829 Msa1045280:intron 50.0%
AAGGGCTTTGCTGGATTGAG+TGG - chr7_2:4577186-4577205 Msa1045280:intron 50.0%
ACGATGCATGATCAGGGGAA+TGG + chr7_2:4577242-4577261 None:intergenic 50.0%
!! GGTCCAGCATTGGTAGGAAT+AGG - chr7_2:4577282-4577301 Msa1045280:intron 50.0%
GGGCCGAAGGTTAATGACAA+AGG + chr7_2:4577519-4577538 None:intergenic 50.0%
!! CCTCTAGAGGTTTTTCCGCA+GGG + chr7_2:4577539-4577558 None:intergenic 50.0%
!! TCCTCTAGAGGTTTTTCCGC+AGG + chr7_2:4577540-4577559 None:intergenic 50.0%
AAGGAGCTGTGAGGGTTAAG+AGG - chr7_2:4577727-4577746 Msa1045280:intron 50.0%
GGTCAGATGAGCCAGTCTTT+GGG - chr7_2:4577876-4577895 Msa1045280:intron 50.0%
TTTCTTGGACGTGTTGGAGG+CGG - chr7_2:4577945-4577964 Msa1045280:intron 50.0%
TGGCCAGGTTCAATGTACGT+TGG - chr7_2:4578649-4578668 Msa1045280:intron 50.0%
GTGCCAACGTACATTGAACC+TGG + chr7_2:4578655-4578674 None:intergenic 50.0%
! GACTTGGTTACGGTGCTCAT+TGG - chr7_2:4578686-4578705 Msa1045280:intron 50.0%
GCAGAGAAACAAGCTCATGG+TGG - chr7_2:4578847-4578866 Msa1045280:intron 50.0%
!! CTGCCATGATAGTGGATGTC+AGG + chr7_2:4578957-4578976 None:intergenic 50.0%
CTGACATCCACTATCATGGC+AGG - chr7_2:4578955-4578974 Msa1045280:intron 50.0%
GGATTATGCATTGTTGCGGC+AGG - chr7_2:4578976-4578995 Msa1045280:intron 50.0%
GAACAAGTGGAGAAACCTCC+TGG + chr7_2:4579322-4579341 None:intergenic 50.0%
AGCTCAGTTGGCAGTTGGCA+GGG + chr7_2:4573798-4573817 None:intergenic 55.0%
TAGCTCAGTTGGCAGTTGGC+AGG + chr7_2:4573799-4573818 None:intergenic 55.0%
! TGTTGGCTGTGTCTGTCAGC+TGG - chr7_2:4575528-4575547 Msa1045280:intron 55.0%
GGGAAGGCTTCTGATCTAGG+CGG - chr7_2:4575851-4575870 Msa1045280:intron 55.0%
GCCATGGTAGAATGGTGTGG+CGG - chr7_2:4576137-4576156 Msa1045280:intron 55.0%
TCCGCCACACCATTCTACCA+TGG + chr7_2:4576141-4576160 None:intergenic 55.0%
!! ATGGTGTGGCGGATTTGTGC+TGG - chr7_2:4576148-4576167 Msa1045280:intron 55.0%
GCTTCACAAACTGCCTACGG+CGG + chr7_2:4576174-4576193 None:intergenic 55.0%
GGCGCTTCACAAACTGCCTA+CGG + chr7_2:4576177-4576196 None:intergenic 55.0%
! TTGTGAAGCGCCACTTGCCA+TGG - chr7_2:4576185-4576204 Msa1045280:intron 55.0%
! TGTGAAGCGCCACTTGCCAT+GGG - chr7_2:4576186-4576205 Msa1045280:intron 55.0%
TTGTGACTTATGGCGCCCCA+TGG + chr7_2:4576205-4576224 None:intergenic 55.0%
! CACAAAGTGCTCACAACGGC+TGG + chr7_2:4576329-4576348 None:intergenic 55.0%
CTGGTCACTCCTTCAATCCG+AGG - chr7_2:4576804-4576823 Msa1045280:intron 55.0%
GCACCAAGTCCTCGGATTGA+AGG + chr7_2:4576816-4576835 None:intergenic 55.0%
AAATTCCAACCACGGGACCC+CGG + chr7_2:4577164-4577183 None:intergenic 55.0%
! GGTTGCTGTTGGTCCAGCAT+TGG - chr7_2:4577272-4577291 Msa1045280:intron 55.0%
!! GCTGTTGGTCCAGCATTGGT+AGG - chr7_2:4577276-4577295 Msa1045280:intron 55.0%
GTCATTAACCTTCGGCCCTG+CGG - chr7_2:4577521-4577540 Msa1045280:CDS 55.0%
CCCTGCGGAAAAACCTCTAG+AGG - chr7_2:4577536-4577555 Msa1045280:CDS 55.0%
GGGAGCAAGTCCACTTCCTT+AGG + chr7_2:4577645-4577664 None:intergenic 55.0%
GTTTCTGCCTTTCCGACGCA+GGG + chr7_2:4577665-4577684 None:intergenic 55.0%
TGCTGCAGAAGGAGCTGTGA+GGG - chr7_2:4577719-4577738 Msa1045280:intron 55.0%
GAGCTGTGAGGGTTAAGAGG+AGG - chr7_2:4577730-4577749 Msa1045280:intron 55.0%
GTGAGGGTTAAGAGGAGGAG+AGG - chr7_2:4577735-4577754 Msa1045280:intron 55.0%
AGGAGGAGAGGACCACATAG+AGG - chr7_2:4577747-4577766 Msa1045280:intron 55.0%
CGGTCAGATGAGCCAGTCTT+TGG - chr7_2:4577875-4577894 Msa1045280:intron 55.0%
AAGCCCTCCTAGAGAGCTCA+AGG + chr7_2:4578365-4578384 None:intergenic 55.0%
! GCAGCTAATGCAGCTGGTCT+TGG + chr7_2:4578583-4578602 None:intergenic 55.0%
TTCATTGGCATGGGATGGCC+AGG - chr7_2:4578634-4578653 Msa1045280:intron 55.0%
GGAGGGAGGGGCAGAAAAGA+GGG + chr7_2:4574027-4574046 None:intergenic 60.0%
GTTGACGAAGGAGGGAGGGA+GGG + chr7_2:4574048-4574067 None:intergenic 60.0%
TGTTGACGAAGGAGGGAGGG+AGG + chr7_2:4574049-4574068 None:intergenic 60.0%
GAGGCCATAGCAGAATGGCG+TGG - chr7_2:4575973-4575992 Msa1045280:intron 60.0%
GCCATAGCAGAATGGCGTGG+CGG - chr7_2:4575976-4575995 Msa1045280:intron 60.0%
TCCGCCACGCCATTCTGCTA+TGG + chr7_2:4575980-4575999 None:intergenic 60.0%
! GTGAAGCGCCACTTGCCATG+GGG - chr7_2:4576187-4576206 Msa1045280:intron 60.0%
TTATGGCGCCCCATGGCAAG+TGG + chr7_2:4576198-4576217 None:intergenic 60.0%
GTGGCCATGGCGAAATGGCA+CGG - chr7_2:4576292-4576311 Msa1045280:intron 60.0%
!! TCTGCCGTGCCATTTCGCCA+TGG + chr7_2:4576299-4576318 None:intergenic 60.0%
! GCAGCCATGATGGAATGGCG+TGG - chr7_2:4576452-4576471 Msa1045280:intron 60.0%
CACTGACACGTGTCGGACAC+TGG - chr7_2:4576785-4576804 Msa1045280:intron 60.0%
! AGGTTTTTCCGCAGGGCCGA+AGG + chr7_2:4577532-4577551 None:intergenic 60.0%
! AGTGGACTTGCTCCCTGCGT+CGG - chr7_2:4577650-4577669 Msa1045280:CDS 60.0%
ACTTGCTCCCTGCGTCGGAA+AGG - chr7_2:4577655-4577674 Msa1045280:intron 60.0%
CGTTTCTGCCTTTCCGACGC+AGG + chr7_2:4577666-4577685 None:intergenic 60.0%
CTGCTGCAAGCTGCTGCAGA+AGG - chr7_2:4577708-4577727 Msa1045280:intron 60.0%
CTGCTGCAGAAGGAGCTGTG+AGG - chr7_2:4577718-4577737 Msa1045280:intron 60.0%
ACCAGCTAGCAGCTTCCACG+CGG - chr7_2:4579221-4579240 Msa1045280:intron 60.0%
GGGAGGGAGGGGCAGAAAAG+AGG + chr7_2:4574028-4574047 None:intergenic 65.0%
ACGAAGGAGGGAGGGAGGGA+GGG + chr7_2:4574044-4574063 None:intergenic 65.0%
! GGATTTGTGCTGGCCGCCGT+AGG - chr7_2:4576158-4576177 Msa1045280:intron 65.0%
CCTGGGCAGCACCAAGTCCT+CGG + chr7_2:4576824-4576843 None:intergenic 65.0%
! ACCACGGGACCCCGGCTTTT+CGG + chr7_2:4577156-4577175 None:intergenic 65.0%
AAAAGCCGGGGTCCCGTGGT+TGG - chr7_2:4577156-4577175 Msa1045280:intron 65.0%
GGTGACGCGCCAAAGTGCGA+AGG - chr7_2:4578916-4578935 Msa1045280:intron 65.0%
ACCGCGTGGAAGCTGCTAGC+TGG + chr7_2:4579225-4579244 None:intergenic 65.0%
AGGAGGGAGGGAGGGAGGGA+GGG + chr7_2:4574040-4574059 None:intergenic 70.0%
AAGGAGGGAGGGAGGGAGGG+AGG + chr7_2:4574041-4574060 None:intergenic 70.0%
GACGAAGGAGGGAGGGAGGG+AGG + chr7_2:4574045-4574064 None:intergenic 70.0%
!! CCGAGGACTTGGTGCTGCCC+AGG - chr7_2:4576821-4576840 Msa1045280:intron 70.0%
! CCACGGGACCCCGGCTTTTC+GGG + chr7_2:4577155-4577174 None:intergenic 70.0%
GGAGGGAGGGAGGGAGGGAG+GGG + chr7_2:4574039-4574058 None:intergenic 75.0%
CCCGAAAAGCCGGGGTCCCG+TGG - chr7_2:4577152-4577171 Msa1045280:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 4572340 4579568 4572340 ID=Msa1045280;Name=Msa1045280
chr7_2 mRNA 4572340 4579568 4572340 ID=Msa1045280-mRNA-1;Parent=Msa1045280;Name=Msa1045280-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.33|0.5|1|1|1|4|488|660
chr7_2 exon 4572340 4573341 4572340 ID=Msa1045280-mRNA-1:exon:1066;Parent=Msa1045280-mRNA-1
chr7_2 exon 4573917 4574836 4573917 ID=Msa1045280-mRNA-1:exon:1065;Parent=Msa1045280-mRNA-1
chr7_2 exon 4577398 4577672 4577398 ID=Msa1045280-mRNA-1:exon:1064;Parent=Msa1045280-mRNA-1
chr7_2 exon 4579295 4579568 4579295 ID=Msa1045280-mRNA-1:exon:1063;Parent=Msa1045280-mRNA-1
chr7_2 CDS 4579295 4579568 4579295 ID=Msa1045280-mRNA-1:cds;Parent=Msa1045280-mRNA-1
chr7_2 CDS 4577398 4577672 4577398 ID=Msa1045280-mRNA-1:cds;Parent=Msa1045280-mRNA-1
chr7_2 CDS 4573917 4574836 4573917 ID=Msa1045280-mRNA-1:cds;Parent=Msa1045280-mRNA-1
chr7_2 CDS 4572828 4573341 4572828 ID=Msa1045280-mRNA-1:cds;Parent=Msa1045280-mRNA-1
chr7_2 three_prime_UTR 4572340 4572827 4572340 ID=Msa1045280-mRNA-1:three_prime_utr;Parent=Msa1045280-mRNA-1
Gene Sequence

>Msa1045280

ATGTGGTTACAATCATGGGCTGGTATAGGATATTTATTTGGAAGCATATCACCAGTTATAAAAAGTTCATTAAATTATAATCAAAAACAACTTGCTATGTTAGGTGTTGCAAAAGACCTTGGTGATGCTGTTGGTTTTTTAACTGGTGTTTTGTGTGAAATTTTACCTATTTGGGCTGCGTTACTTGTTGGAGCTTCTTTGAATCTTGTTGGTTATGGCTGGGTTTGGTTAATTGTTACTAGTAAAGTTCCTGTTCTTCCTTTATGGGCTGTAAGAGCAATGTGGTTACAATCATGGGCTGGTATAGGATATTTATTTGGAAGCATATCACCAGTTATAAAAAGTTCATTAAATTATAATCAAAAACAACTTGCTATGTTAGGTGTTGCAAAAGACCTTGGTGATTGTGTTGGTTTTTTAACTGGTGTTTTGTGTGAAATTTTACCTATTTGGGCTGCTTTGCTTGTTGGAGCTTCTTTGAATCTTGTTGGTTATGGCTGGGTTTGGTTAATTGTTACTAGTAAAGTTCCTGTTCTTCCTTTATGGGCTATGTGTATTCTTATATTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTTTGGTTTCTTGTGTTCAAAATTTCCCGAAAAGCCGGGGTCCCGTGGTTGGAATTTTAAAGGGCTTTGCTGGATTGAGTGGTGCAATATTGACTCAAATATATGCAGTTATCCATTCCCCTGATCATGCATCGTTAATATTCATGGTTGCTGTTGGTCCAGCATTGGTAGGAATAGGTCTTATGTTCATTGTTAGACCTGTCGGAGGTCACAAACAAGTGCGGCCGTCGGATGGAAAATCTTTCACGTTGGTTTATGGTGTATGTCTCTTGTTGGCTGCTTATTTGATGGGAGTTATGGTTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCACAATTTTTACAATCATCCTCTTTTTGATCCTCATTGCTCCGATTATAATTCCTTTGTCATTAACCTTCGGCCCTGCGGAAAAACCTCTAGAGGAAGAAGCACTTCTTCCAGAAACAGAAGGACAATCTCAAAATTATTCAGATGAAGTAATATTAAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTCCCTGCGTCGGAAAGGCAGAAACGTATAGCACAATTACAATCAAGACTGCTGCAAGCTGCTGCAGAAGGAGCTGTGAGGGTTAAGAGGAGGAGAGGACCACATAGAGGAGAAGATTTTACCTTGACGCAAGCTTTGATTAAAGCAGATTTTTGGCTTCTTTTCATTTCCATGGTCTTAGGTTCTGGATCTGGGTTGACTGTAATTGACAATCTCGGTCAGATGAGCCAGTCTTTGGGATATGACAATGCACATATTTTCGTCTCCATGATCAGTATTTGGAACTTTCTTGGACGTGTTGGAGGCGGCTACATATCTGAGATTGTTGTCAAGGATCATACATATCCAAGACCAGCTGCATTAGCTGCATTTCAACTAGCTATGACTGTTGGTCATCTTTTCATTGGCATGGGATGGCCAGGTTCAATGTACGTTGGCACTTTACTAGTTGGACTTGGTTACGGTGCTCATTGGGCAGTTGTTCCAGCTACAGCCTCTGAATTATTTGGTTTAAGAAACTTTGGTGCATTATACAATTTCATCACTCTAGCAAACCCTGTTGGAACTCTTGTCTTCTCTAGTCTCATTGCTAGTAGGATCTATGATTATGAAGCAGAGAAACAAGCTCATGGTGGCCAAAACCTGAATATAGCATCATTCGTATCTAGTGCGCTTAATGTTGGTGACGCGCCAAAGTGCGAAGGTTCCATATGCTTCTTCCTGACATCCACTATCATGGCAGGATTATGCATTGTTGCGGCAGGGTTAAGCATGTTTCTCGTGTTCCGAACAAGGATTGTTTATGCTAGCTTGTATGGAAAATCTTCTATGCGAAGCCTTCGATGA
Protein sequence

>Msa1045280

MWLQSWAGIGYLFGSISPVIKSSLNYNQKQLAMLGVAKDLGDAVGFLTGVLCEILPIWAALLVGASLNLVGYGWVWLIVTSKVPVLPLWAVRAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLAMLGVAKDLGDCVGFLTGVLCEILPIWAALLVGASLNLVGYGWVWLIVTSKVPVLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAVIHSPDHASLIFMVAVGPALVGIGLMFIVRPVGGHKQVRPSDGKSFTLVYGVCLLLAAYLMGVMVVQDLVDLSETVITIFTIILFLILIAPIIIPLSLTFGPAEKPLEEEALLPETEGQSQNYSDEVILSELEDEKPKEVDLLPASERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEIVVKDHTYPRPAALAAFQLAMTVGHLFIGMGWPGSMYVGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHGGQNLNIASFVSSALNVGDAPKCEGSICFFLTSTIMAGLCIVAAGLSMFLVFRTRIVYASLYGKSSMRSLR*