Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0617930 | XP_003629733.2 | 96.061 | 1117 | 1 | 5 | 1 | 1074 | 1 | 1117 | 0.0 | 2170 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0617930 | sp|Q8BKC5|IPO5_MOUSE | 36.940 | 1072 | 610 | 16 | 43 | 1074 | 51 | 1096 | 0.0 | 686 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0617930 | A0A396GNB0 | 96.061 | 1117 | 1 | 5 | 1 | 1074 | 1 | 1117 | 0.0 | 2170 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0037180 | Msa0617930 | 0.815937 | 7.157690e-52 | -8.615850e-47 |
Msa0617930 | Msa0657010 | 0.961318 | 1.455161e-119 | -8.615850e-47 |
Msa0617930 | Msa0672950 | 0.810843 | 9.420085e-51 | -8.615850e-47 |
Msa0617930 | Msa0672980 | 0.812886 | 3.382389e-51 | -8.615850e-47 |
Msa0617930 | Msa0700960 | 0.862787 | 3.956258e-64 | -8.615850e-47 |
Msa0617930 | Msa1010440 | 0.823116 | 1.647338e-53 | -8.615850e-47 |
Msa0617930 | Msa1052000 | 0.825733 | 3.991107e-54 | -8.615850e-47 |
Msa0617930 | Msa1096760 | 0.856406 | 3.288522e-62 | -8.615850e-47 |
Msa0617930 | Msa1140410 | 0.862956 | 3.509213e-64 | -8.615850e-47 |
Msa0617930 | Msa1402300 | 0.809100 | 2.236124e-50 | -8.615850e-47 |
Msa0177320 | Msa0617930 | 0.812406 | 4.307429e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0617930 | MtrunA17_Chr8g0378791 | 96.061 | 1117 | 1 | 5 | 1 | 1074 | 1 | 1117 | 0.0 | 2170 |
Msa0617930 | MtrunA17_Chr7g0253431 | 76.999 | 1113 | 208 | 7 | 9 | 1074 | 7 | 1118 | 0.0 | 1701 |
Msa0617930 | MtrunA17_Chr2g0277681 | 26.273 | 1100 | 681 | 36 | 17 | 1071 | 30 | 1044 | 2.65e-86 | 301 |
Msa0617930 | MtrunA17_Chr3g0110011 | 45.106 | 235 | 127 | 1 | 840 | 1074 | 110 | 342 | 3.28e-62 | 215 |
Msa0617930 | MtrunA17_Chr3g0110081 | 25.689 | 798 | 465 | 25 | 81 | 830 | 167 | 884 | 1.22e-44 | 175 |
Msa0617930 | MtrunA17_Chr3g0110021 | 30.163 | 368 | 218 | 13 | 41 | 373 | 73 | 436 | 5.95e-31 | 127 |
Msa0617930 | MtrunA17_Chr3g0110051 | 22.379 | 782 | 510 | 24 | 41 | 795 | 109 | 820 | 2.78e-29 | 126 |
Msa0617930 | MtrunA17_Chr3g0110041 | 24.643 | 560 | 358 | 20 | 41 | 545 | 120 | 670 | 8.44e-26 | 114 |
Msa0617930 | MtrunA17_Chr3g0110061 | 24.396 | 455 | 320 | 11 | 112 | 542 | 148 | 602 | 2.23e-25 | 112 |
Msa0617930 | MtrunA17_Chr8g0388701 | 32.335 | 167 | 95 | 3 | 878 | 1043 | 12 | 161 | 7.98e-21 | 91.3 |
Msa0617930 | MtrunA17_Chr3g0110071 | 36.792 | 106 | 62 | 3 | 877 | 982 | 6 | 106 | 2.29e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0617930 | AT5G19820.1 | 78.782 | 1117 | 193 | 6 | 1 | 1074 | 1 | 1116 | 0.0 | 1782 |
Msa0617930 | AT4G27640.1 | 24.930 | 1071 | 704 | 31 | 17 | 1051 | 30 | 1036 | 1.72e-78 | 279 |
Msa0617930 | AT2G16950.2 | 22.353 | 595 | 356 | 22 | 49 | 569 | 67 | 629 | 1.93e-12 | 72.4 |
Msa0617930 | AT2G16950.1 | 22.371 | 599 | 355 | 23 | 49 | 569 | 67 | 633 | 7.76e-12 | 70.1 |
Find 280 sgRNAs with CRISPR-Local
Find 702 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAAATACCGCTACTATTT+TGG | 0.031192 | 4_2:-68636038 | None:intergenic |
CAATTGTCCAATTGCATTAA+TGG | 0.133282 | 4_2:-68628287 | None:intergenic |
GGTTAATTCTGATGTTTATT+TGG | 0.176263 | 4_2:+68637529 | Msa0617930:three_prime_UTR |
CCTCGTGGAAATAAAATTTA+AGG | 0.186312 | 4_2:-68632439 | None:intergenic |
TCATATGCCATTACATTATC+TGG | 0.189146 | 4_2:-68635566 | None:intergenic |
CTCGGTGTTTGTGCTGAGTT+TGG | 0.199189 | 4_2:+68635390 | Msa0617930:CDS |
CTCAATCAAATCACCTTTAA+TGG | 0.208670 | 4_2:-68635859 | None:intergenic |
GGAACAATTACCTGCGTATT+TGG | 0.211478 | 4_2:+68627990 | Msa0617930:CDS |
TGGACAATTGTCTACTGATT+TGG | 0.219251 | 4_2:+68628300 | Msa0617930:CDS |
TGACAGCATCATAATATTTC+TGG | 0.220680 | 4_2:-68630764 | None:intergenic |
TCTGATGTTTATTTGGATAT+TGG | 0.227132 | 4_2:+68637536 | Msa0617930:three_prime_UTR |
CTGTCGGAAAGGAGAAATTT+AGG | 0.230051 | 4_2:+68630883 | Msa0617930:CDS |
GTTAGAAAAGCTGCCGTTTC+AGG | 0.232754 | 4_2:+68632464 | Msa0617930:CDS |
TTGGGAAGGTATTGATTGTT+TGG | 0.242619 | 4_2:-68636019 | None:intergenic |
CAAATTGCTTGTACTTCTTC+AGG | 0.252482 | 4_2:+68630470 | Msa0617930:CDS |
CGCCGATCGAGATAGGTTTC+AGG | 0.254493 | 4_2:+68627510 | Msa0617930:CDS |
GGCTAGACTCTGCAAGTGTC+TGG | 0.264832 | 4_2:+68631679 | Msa0617930:CDS |
CTATCAGGTGGGCGAGATAT+TGG | 0.266277 | 4_2:+68634183 | Msa0617930:intron |
TCACCTGTACGCGGGGATTC+TGG | 0.279627 | 4_2:-68628390 | None:intergenic |
TGGGGCAATTCGTGCAGTTT+TGG | 0.279857 | 4_2:+68637299 | Msa0617930:three_prime_UTR |
ACAGATCTCCGGGATGCTTT+TGG | 0.283742 | 4_2:+68633886 | Msa0617930:intron |
CAATACTGTCCTGGTGAAAT+TGG | 0.284416 | 4_2:-68635619 | None:intergenic |
TGTGACTTCCGTAGTGTATA+TGG | 0.293337 | 4_2:+68637497 | Msa0617930:three_prime_UTR |
GGATAGGTTATCGATATCTT+TGG | 0.294948 | 4_2:+68627939 | Msa0617930:intron |
TCGGTGTTTGTGCTGAGTTT+GGG | 0.303824 | 4_2:+68635391 | Msa0617930:CDS |
TTCAGTAAATGAATGCTTAC+AGG | 0.307262 | 4_2:+68633084 | Msa0617930:CDS |
CTAACTATTCCATCCAAGTA+TGG | 0.308374 | 4_2:-68630447 | None:intergenic |
CCATCATTCATTCTTGCATA+TGG | 0.310310 | 4_2:+68637093 | Msa0617930:three_prime_UTR |
CTGACGGAGGCGTTGAATTC+AGG | 0.312922 | 4_2:+68627559 | Msa0617930:CDS |
TATTCTGATGAAGATGCTTT+TGG | 0.313367 | 4_2:+68627825 | Msa0617930:CDS |
AAGTATGGCGTTAAAATTTC+AGG | 0.313954 | 4_2:-68630432 | None:intergenic |
GGACAATTGTCTACTGATTT+GGG | 0.318866 | 4_2:+68628301 | Msa0617930:CDS |
ACAACTGTCTAACCTCCTTT+TGG | 0.319452 | 4_2:-68637201 | None:intergenic |
ATTGCAATCCTTCTCTCTTC+AGG | 0.323590 | 4_2:-68635043 | None:intergenic |
GCTCAATTGTCGCAGTATAT+TGG | 0.327463 | 4_2:+68627352 | Msa0617930:CDS |
CATCGTTTCTCCATAGCATC+TGG | 0.329357 | 4_2:+68636973 | Msa0617930:three_prime_UTR |
AACATAAACGGAAGCAATTC+GGG | 0.332416 | 4_2:-68627274 | None:intergenic |
CATGCTTCGTGCTAAGTCTA+TGG | 0.334668 | 4_2:+68630836 | Msa0617930:CDS |
TCACGATCAACTTTGTTCTA+TGG | 0.339301 | 4_2:+68635893 | Msa0617930:CDS |
GCCGTATTGCGTGAGAAAAT+AGG | 0.339501 | 4_2:+68637268 | Msa0617930:three_prime_UTR |
CCGTATTGCGTGAGAAAATA+GGG | 0.343861 | 4_2:+68637269 | Msa0617930:three_prime_UTR |
TACATATCTTCCATTCTTGT+TGG | 0.350706 | 4_2:+68635217 | Msa0617930:CDS |
TTGAACTGTCTGCCCATTAA+AGG | 0.352539 | 4_2:+68635846 | Msa0617930:CDS |
GGCATGACAAATTCCATATA+AGG | 0.363015 | 4_2:-68631716 | None:intergenic |
TACAATTGTTCCTGTTGCTT+CGG | 0.363337 | 4_2:+68627969 | Msa0617930:CDS |
TGGGAAGGTATTGATTGTTT+GGG | 0.363550 | 4_2:-68636018 | None:intergenic |
TGAGCGTTTGGTGTATTAGA+TGG | 0.365697 | 4_2:+68637621 | Msa0617930:three_prime_UTR |
GATAGGTTATCGATATCTTT+GGG | 0.368820 | 4_2:+68627940 | Msa0617930:intron |
GAATGATGGAAACCATCTTA+TGG | 0.370067 | 4_2:-68637079 | None:intergenic |
GCTGCATTTGCAGGTAGTTC+CGG | 0.371697 | 4_2:+68635818 | Msa0617930:intron |
TCTGTGTTCAAACCTCTTGT+TGG | 0.375892 | 4_2:+68635417 | Msa0617930:CDS |
TGCAATGCTTCCACCAAAGC+TGG | 0.377656 | 4_2:-68632700 | None:intergenic |
TATCAGGTGGGCGAGATATT+GGG | 0.378338 | 4_2:+68634184 | Msa0617930:intron |
TGCGGAGGCTGAGTCTTTAG+AGG | 0.379336 | 4_2:+68627693 | Msa0617930:CDS |
TGGAATCAAGACTAGTGTTC+TGG | 0.380110 | 4_2:+68632210 | Msa0617930:CDS |
AGAGGGAGCCTTGACTGCTT+TGG | 0.381283 | 4_2:+68630630 | Msa0617930:CDS |
GTCTATGGAATGCATAAGTT+TGG | 0.383864 | 4_2:+68630851 | Msa0617930:CDS |
TTTCTGCAGGCAGCGGTATA+CGG | 0.384330 | 4_2:+68635366 | Msa0617930:intron |
TCCCAACTCGCGGCGATTCT+CGG | 0.388817 | 4_2:+68626881 | Msa0617930:CDS |
AAACATAAACGGAAGCAATT+CGG | 0.390323 | 4_2:-68627275 | None:intergenic |
ACTCTCGGTGACAAAAGAAT+TGG | 0.392745 | 4_2:+68632190 | Msa0617930:CDS |
CTTGCACAAATTTCTGTGTC+AGG | 0.397759 | 4_2:-68633052 | None:intergenic |
AGAGGAAGGGACTAGGCATT+TGG | 0.398444 | 4_2:+68627711 | Msa0617930:CDS |
ACTACGGAAGTCACAGATTC+AGG | 0.401117 | 4_2:-68637489 | None:intergenic |
TTATCTGGATGAAGCGCATT+AGG | 0.403617 | 4_2:-68635551 | None:intergenic |
CTGGTTCCGCCGATCGAGAT+AGG | 0.405719 | 4_2:+68627503 | Msa0617930:CDS |
AGGTCCGACAGCTCTCTCTT+AGG | 0.406373 | 4_2:+68635995 | Msa0617930:intron |
CGCCGAGAATCGCCGCGAGT+TGG | 0.410430 | 4_2:-68626883 | None:intergenic |
CATTGACCAATATAGCCTTC+AGG | 0.412023 | 4_2:-68630794 | None:intergenic |
TGATATTGAACTTGCAAATC+CGG | 0.412982 | 4_2:-68628325 | None:intergenic |
CAGCTGTTTGTTCTGTTGCA+AGG | 0.416156 | 4_2:-68636803 | None:intergenic |
ATCGACGACAAATTATTACT+TGG | 0.416372 | 4_2:-68637444 | None:intergenic |
TAGCAGGCGGTAATGTTTGC+TGG | 0.418065 | 4_2:-68636854 | None:intergenic |
GCCGAGAATCGCCGCGAGTT+GGG | 0.420121 | 4_2:-68626882 | None:intergenic |
AAATATAGAGACCACCAAAC+TGG | 0.420439 | 4_2:-68637039 | None:intergenic |
TGGGCAGCCATTAATGCAAT+TGG | 0.420671 | 4_2:+68628280 | Msa0617930:CDS |
GCTTGAGTTGCTTATTGAAC+TGG | 0.422700 | 4_2:+68627606 | Msa0617930:CDS |
AATAGTTGAAGAGGTAAAAC+AGG | 0.425292 | 4_2:+68633928 | Msa0617930:CDS |
ATCTTATTATTATTAGTTTG+AGG | 0.426835 | 4_2:+68637648 | Msa0617930:three_prime_UTR |
AGCATCAAAATCTTCAGCTT+GGG | 0.426942 | 4_2:-68633996 | None:intergenic |
TGACAATGCAGTTTCTGCTC+TGG | 0.428092 | 4_2:+68635586 | Msa0617930:CDS |
AGATGCCGCAGTTTATTAGT+AGG | 0.433330 | 4_2:+68627794 | Msa0617930:CDS |
TCAATCAAATCACCTTTAAT+GGG | 0.436293 | 4_2:-68635858 | None:intergenic |
ACCGTACCTGAAGGCTATAT+TGG | 0.437750 | 4_2:+68630788 | Msa0617930:CDS |
ATGTGTATATTGAGTGTTCA+TGG | 0.438075 | 4_2:+68637167 | Msa0617930:three_prime_UTR |
CGCGTGATGATTCATTCCTC+TGG | 0.442926 | 4_2:+68627107 | Msa0617930:CDS |
ATTCTTTCCATGGATTGATC+AGG | 0.444124 | 4_2:+68632291 | Msa0617930:CDS |
GCCAGCCCTAGCTGCTGCCA+TGG | 0.444572 | 4_2:+68628360 | Msa0617930:CDS |
AGGCAAGAAGGATGCTTTGA+AGG | 0.444588 | 4_2:-68634221 | None:intergenic |
AAAGCAGCAATTCTGACATC+AGG | 0.445785 | 4_2:-68627448 | None:intergenic |
TGTCGGAAAGGAGAAATTTA+GGG | 0.446376 | 4_2:+68630884 | Msa0617930:CDS |
GTGTTCAAACCTCTTGTTGG+AGG | 0.452256 | 4_2:+68635420 | Msa0617930:CDS |
CATCTTATTTGACTCCTATG+TGG | 0.455513 | 4_2:+68634260 | Msa0617930:CDS |
GATGCAGGTTGCAGGAACTT+TGG | 0.456597 | 4_2:+68632409 | Msa0617930:intron |
CAGCATCAAAATCTTCAGCT+TGG | 0.459418 | 4_2:-68633997 | None:intergenic |
GGCTTGAGAACGTTCTTCGT+TGG | 0.461472 | 4_2:-68626954 | None:intergenic |
CAGGTGGAAGCAAGGGTAGC+AGG | 0.463259 | 4_2:-68636870 | None:intergenic |
TTTGGATATTGAGGATGATC+CGG | 0.464010 | 4_2:+68627843 | Msa0617930:CDS |
ATATCTTCCATTCTTGTTGG+AGG | 0.464362 | 4_2:+68635220 | Msa0617930:CDS |
TTGAGATTGCCCTTTCTCAA+TGG | 0.464568 | 4_2:-68632632 | None:intergenic |
ATTTAGGGCTGATGCTAAGC+AGG | 0.466706 | 4_2:+68630899 | Msa0617930:CDS |
TGACAGTATCATCCCAGCTT+TGG | 0.467023 | 4_2:+68632687 | Msa0617930:CDS |
CTGCTACCCTTGCTTCCACC+TGG | 0.467347 | 4_2:+68636871 | Msa0617930:CDS |
ATTGTCTACTGATTTGGGTC+CGG | 0.467478 | 4_2:+68628306 | Msa0617930:CDS |
AAGCGATTTGAGAGAAGCTT+GGG | 0.473464 | 4_2:-68627149 | None:intergenic |
ATGCTAACCTGTCTAACATC+TGG | 0.474453 | 4_2:-68635260 | None:intergenic |
TGAAAGAAGGATTCTTTCCA+TGG | 0.475708 | 4_2:+68632281 | Msa0617930:CDS |
TGTAGCATGTAACTTGTTGT+TGG | 0.478385 | 4_2:-68631565 | None:intergenic |
GATGACAATTCTTCAAAGAA+AGG | 0.480654 | 4_2:-68634241 | None:intergenic |
AGAAATTTGTGCAAGTATGT+TGG | 0.481433 | 4_2:+68633060 | Msa0617930:CDS |
TGATTACTCTTGCTGAAGCT+AGG | 0.483939 | 4_2:+68627746 | Msa0617930:CDS |
GGTAATTGTTCCGAAGCAAC+AGG | 0.484612 | 4_2:-68627979 | None:intergenic |
ATCTTATTTGACTCCTATGT+GGG | 0.485888 | 4_2:+68634261 | Msa0617930:CDS |
GAAGCTAGGGAGCGTGCTCC+TGG | 0.485994 | 4_2:+68627760 | Msa0617930:CDS |
GCAAAGTTAGCCATTGAGAA+AGG | 0.486249 | 4_2:+68632622 | Msa0617930:CDS |
CTGATCAACATCCTCGTGTA+AGG | 0.486407 | 4_2:+68628257 | Msa0617930:CDS |
GTCCTTGCAAGGATCACAAA+TGG | 0.486615 | 4_2:+68631531 | Msa0617930:CDS |
TTCAAAATCTGATATCAGAA+AGG | 0.487538 | 4_2:-68637365 | None:intergenic |
CAATATCTCTATAGCAATGC+CGG | 0.488186 | 4_2:+68632585 | Msa0617930:intron |
GAAGCGATTTGAGAGAAGCT+TGG | 0.489764 | 4_2:-68627150 | None:intergenic |
GACTACCTTTGAGCTTCCCT+CGG | 0.492890 | 4_2:-68628067 | None:intergenic |
CAGGCAGCGGTATACGGCCT+CGG | 0.494617 | 4_2:+68635372 | Msa0617930:intron |
TCAAAATCTGATATCAGAAA+GGG | 0.495216 | 4_2:-68637364 | None:intergenic |
GAATCCTTCTTTCAACTCAT+CGG | 0.496573 | 4_2:-68632272 | None:intergenic |
TTGCAAGTTCAATATCATCA+AGG | 0.497804 | 4_2:+68628331 | Msa0617930:CDS |
TTTAGAGCAAGTGGTGGCTA+TGG | 0.499528 | 4_2:+68628219 | Msa0617930:CDS |
TTACATGCCTCCAACAAGAA+TGG | 0.499838 | 4_2:-68635227 | None:intergenic |
GTCTGAGTAAACTAACCATT+CGG | 0.499941 | 4_2:-68636827 | None:intergenic |
ATCAGTTGCTGATTCATCTC+AGG | 0.501257 | 4_2:+68630654 | Msa0617930:CDS |
ATCATCCATGGCAGCAGCTA+GGG | 0.501960 | 4_2:-68628365 | None:intergenic |
ATTTCAGAATGGTAAACAAA+TGG | 0.503330 | 4_2:+68630603 | Msa0617930:intron |
CAGTATCATCCCAGCTTTGG+TGG | 0.504748 | 4_2:+68632690 | Msa0617930:CDS |
ATGGAATGCATAAGTTTGGT+TGG | 0.505162 | 4_2:+68630855 | Msa0617930:CDS |
TCCATGGCAGCAGCTAGGGC+TGG | 0.505867 | 4_2:-68628361 | None:intergenic |
TTTGGTGGAAGCATTGCATA+AGG | 0.506410 | 4_2:+68632705 | Msa0617930:CDS |
ACTATGCAAACTATGAAGAA+AGG | 0.510590 | 4_2:-68636935 | None:intergenic |
GCTAGACTCTGCAAGTGTCT+GGG | 0.510865 | 4_2:+68631680 | Msa0617930:CDS |
GACAATGCAGTTTCTGCTCT+GGG | 0.511023 | 4_2:+68635587 | Msa0617930:CDS |
AACTGCCAACCCAGATGCTA+TGG | 0.512225 | 4_2:-68636983 | None:intergenic |
CGGTGTTTGTGCTGAGTTTG+GGG | 0.513048 | 4_2:+68635392 | Msa0617930:CDS |
TTTGAGAGAAGCTTGGGTGT+TGG | 0.513935 | 4_2:-68627143 | None:intergenic |
CATTAAAGGTGATTTGATTG+AGG | 0.514731 | 4_2:+68635860 | Msa0617930:CDS |
GATGAAGCGCATTAGGATGT+TGG | 0.515875 | 4_2:-68635544 | None:intergenic |
ATAGCATCTGGGTTGGCAGT+TGG | 0.517021 | 4_2:+68636985 | Msa0617930:three_prime_UTR |
TATGCCGATGAGTTGAAAGA+AGG | 0.518825 | 4_2:+68632268 | Msa0617930:CDS |
AACAACAAGTTACATGCTAC+AGG | 0.519395 | 4_2:+68631567 | Msa0617930:CDS |
ACCTGCGTATTTGGCTGCAC+CGG | 0.521180 | 4_2:+68627999 | Msa0617930:CDS |
AGTCTTTAGAGGAAGGGACT+AGG | 0.521662 | 4_2:+68627704 | Msa0617930:CDS |
CTTACACGAGGATGTTGATC+AGG | 0.522287 | 4_2:-68628256 | None:intergenic |
GAAAGGGCAATCTCAAGGTC+GGG | 0.523223 | 4_2:+68632639 | Msa0617930:CDS |
GAAACGCACTGAAACATAAA+CGG | 0.523550 | 4_2:-68627286 | None:intergenic |
GATCATTCTCATACCTGAAA+CGG | 0.524594 | 4_2:-68632477 | None:intergenic |
TTTCCAGAATCCCCGCGTAC+AGG | 0.525098 | 4_2:+68628387 | Msa0617930:CDS |
ATCGTTTCTCCATAGCATCT+GGG | 0.527571 | 4_2:+68636974 | Msa0617930:three_prime_UTR |
TTGAGAACGTTCTTCGTTGG+TGG | 0.527614 | 4_2:-68626951 | None:intergenic |
CTCCATTTGTGATCCTTGCA+AGG | 0.529100 | 4_2:-68631533 | None:intergenic |
ATCAGAGTCTCAAACGGTGA+TGG | 0.529863 | 4_2:-68626911 | None:intergenic |
CACAGATTCAGGAATATAAG+TGG | 0.531202 | 4_2:-68637478 | None:intergenic |
GAGAAAATAGGGTTGTCTGT+GGG | 0.532075 | 4_2:+68637280 | Msa0617930:three_prime_UTR |
TAGCAACTATAGTGTTGGAC+AGG | 0.533245 | 4_2:+68627909 | Msa0617930:CDS |
AATCATCCATGGCAGCAGCT+AGG | 0.533390 | 4_2:-68628366 | None:intergenic |
AACTGATGCCAAAGCAGTCA+AGG | 0.535384 | 4_2:-68630638 | None:intergenic |
CCATATGCAAGAATGAATGA+TGG | 0.541120 | 4_2:-68637093 | None:intergenic |
TGCAAGTTCAATATCATCAA+GGG | 0.542378 | 4_2:+68628332 | Msa0617930:CDS |
CAAAGTTAGCCATTGAGAAA+GGG | 0.544023 | 4_2:+68632623 | Msa0617930:CDS |
GGGCAGAGTCAATACTGTCC+TGG | 0.546727 | 4_2:-68635628 | None:intergenic |
GATTACTCTTGCTGAAGCTA+GGG | 0.546767 | 4_2:+68627747 | Msa0617930:CDS |
GATAGCCGAGGGAAGCTCAA+AGG | 0.547363 | 4_2:+68628062 | Msa0617930:CDS |
GGTCAAGTCAATAGTTGAAG+AGG | 0.548828 | 4_2:+68633919 | Msa0617930:CDS |
GGCAGACAGTTCAACCATGC+CGG | 0.549952 | 4_2:-68635837 | None:intergenic |
TGAAACTCCAGATGTTAGAC+AGG | 0.551089 | 4_2:+68635253 | Msa0617930:CDS |
TGCAAACTATGAAGAAAGGA+TGG | 0.552426 | 4_2:-68636931 | None:intergenic |
ATCAACATCCTCGTGTAAGG+TGG | 0.552996 | 4_2:+68628260 | Msa0617930:CDS |
TGGAAATAAAATTTAAGGAG+TGG | 0.553423 | 4_2:-68632434 | None:intergenic |
GTCAGCGTCGTCATCATCGC+AGG | 0.556570 | 4_2:-68627541 | None:intergenic |
TTTGCAGATCGTAATAGCTC+CGG | 0.557132 | 4_2:-68632604 | None:intergenic |
AGTCTCAAACGGTGATGGAT+CGG | 0.558898 | 4_2:-68626906 | None:intergenic |
ATGCATAAGTTTGGTTGGAA+TGG | 0.560001 | 4_2:+68630860 | Msa0617930:CDS |
CGATCAACTTTGTTCTATGG+CGG | 0.561251 | 4_2:+68635896 | Msa0617930:CDS |
GGCATCTTCCTCATCATACC+AGG | 0.561763 | 4_2:-68627778 | None:intergenic |
GTATCCGCAGTGTGCCATGC+CGG | 0.562718 | 4_2:-68627862 | None:intergenic |
ATGGTGCGATTGAGTCCAAA+AGG | 0.562737 | 4_2:+68637186 | Msa0617930:three_prime_UTR |
GAATCTAGCAACTATAGTGT+TGG | 0.562795 | 4_2:+68627904 | Msa0617930:CDS |
AAGATGACCAGGTGGAAGCA+AGG | 0.562842 | 4_2:-68636878 | None:intergenic |
AGAAAGGGCAATCTCAAGGT+CGG | 0.564082 | 4_2:+68632638 | Msa0617930:CDS |
GAAGTTCTTATGTCCTTGCA+AGG | 0.564320 | 4_2:+68631520 | Msa0617930:CDS |
GAGGCTGAGTCTTTAGAGGA+AGG | 0.565506 | 4_2:+68627697 | Msa0617930:CDS |
TTGTTGTAACTGAGTTGACT+CGG | 0.565843 | 4_2:-68626858 | None:intergenic |
AACTGGCGGGGACTGAGCCA+AGG | 0.566110 | 4_2:+68627623 | Msa0617930:CDS |
GCAGATGTGATGGTAACGTC+AGG | 0.566720 | 4_2:-68631767 | None:intergenic |
TCAAGAGGCAACTGCTCAAG+AGG | 0.566933 | 4_2:+68627582 | Msa0617930:CDS |
GGTTGGAATGGCTGTCGGAA+AGG | 0.567317 | 4_2:+68630872 | Msa0617930:CDS |
TATTTGGATATTGGCCGAGT+AGG | 0.567939 | 4_2:+68637545 | Msa0617930:three_prime_UTR |
AGGTTAGACAGTTGTTGCAT+CGG | 0.569103 | 4_2:+68637209 | Msa0617930:three_prime_UTR |
TTCTTCAAAGAAAGGCAAGA+AGG | 0.569138 | 4_2:-68634233 | None:intergenic |
CACTGCGGATACTGAGGATG+AGG | 0.569817 | 4_2:+68627873 | Msa0617930:CDS |
TAGATGATTCTGATGATGAA+AGG | 0.572299 | 4_2:+68631807 | Msa0617930:CDS |
ATTTGCAGGTAGTTCCGGCA+TGG | 0.573214 | 4_2:+68635823 | Msa0617930:intron |
GATACTGAGGATGAGGATGC+TGG | 0.574068 | 4_2:+68627880 | Msa0617930:CDS |
AGTCTAACCTGATCAATCCA+TGG | 0.574932 | 4_2:-68632298 | None:intergenic |
GGCGTTGAATTCAGGTCAAG+AGG | 0.580191 | 4_2:+68627567 | Msa0617930:CDS |
AGATGACCAGGTGGAAGCAA+GGG | 0.581291 | 4_2:-68636877 | None:intergenic |
GATTAAAGAGGAAAACGAGC+AGG | 0.581297 | 4_2:+68634033 | Msa0617930:CDS |
AGTTTGGTTGGAATGGCTGT+CGG | 0.582073 | 4_2:+68630867 | Msa0617930:CDS |
ACCAATATAGCCTTCAGGTA+CGG | 0.584658 | 4_2:-68630789 | None:intergenic |
AGGAAAGGTCACCTGTACGC+GGG | 0.585014 | 4_2:-68628398 | None:intergenic |
TGGTAAACAAATGGTGCAAG+AGG | 0.585953 | 4_2:+68630612 | Msa0617930:CDS |
ACGAGGATGTTGATCAGGAA+AGG | 0.589437 | 4_2:-68628251 | None:intergenic |
TGAGTTGCTTATTGAACTGG+CGG | 0.591035 | 4_2:+68627609 | Msa0617930:CDS |
GCAATGCTTCCACCAAAGCT+GGG | 0.591321 | 4_2:-68632699 | None:intergenic |
CTAGACTCTGCAAGTGTCTG+GGG | 0.591446 | 4_2:+68631681 | Msa0617930:CDS |
AGTTGCTTATTGAACTGGCG+GGG | 0.591635 | 4_2:+68627611 | Msa0617930:CDS |
TTTCTCCATAGCATCTGGGT+TGG | 0.592670 | 4_2:+68636978 | Msa0617930:three_prime_UTR |
AGAAAATAGGGTTGTCTGTG+GGG | 0.596860 | 4_2:+68637281 | Msa0617930:three_prime_UTR |
GCTTCATCCAGATAATGTAA+TGG | 0.597429 | 4_2:+68635559 | Msa0617930:CDS |
TTGCGGCTGCAAAGATGACC+AGG | 0.597788 | 4_2:-68636889 | None:intergenic |
ATTGAGAAAGGGCAATCTCA+AGG | 0.599282 | 4_2:+68632634 | Msa0617930:CDS |
TGTTGTAACTGAGTTGACTC+GGG | 0.599478 | 4_2:-68626857 | None:intergenic |
ACAAGACTCCTGAAGAGAGA+AGG | 0.600764 | 4_2:+68635035 | Msa0617930:CDS |
TGTGAGATCAGAGTCTCAAA+CGG | 0.602992 | 4_2:-68626917 | None:intergenic |
AGGCTGAGTCTTTAGAGGAA+GGG | 0.607000 | 4_2:+68627698 | Msa0617930:CDS |
CTTGCAACAGAACAAACAGC+TGG | 0.607654 | 4_2:+68636804 | Msa0617930:CDS |
GAAGCAGACTGAAGCAATGG+TGG | 0.608511 | 4_2:-68631737 | None:intergenic |
AACTTTGTTCTATGGCGGAG+AGG | 0.608912 | 4_2:+68635901 | Msa0617930:CDS |
GGGATTCTGGAAATCATCCA+TGG | 0.611070 | 4_2:-68628377 | None:intergenic |
GGACAGTATTGACTCTGCCC+AGG | 0.611934 | 4_2:+68635631 | Msa0617930:CDS |
CGTATTTGGCTGCACCGGAG+TGG | 0.613438 | 4_2:+68628004 | Msa0617930:CDS |
AGTATGGAAACTATCACTCT+CGG | 0.613971 | 4_2:+68632175 | Msa0617930:intron |
ATCCTGAAACCTATCTCGAT+CGG | 0.616506 | 4_2:-68627512 | None:intergenic |
TAAGCAGTACCTCCAACAAG+AGG | 0.616877 | 4_2:-68635429 | None:intergenic |
TGCGATGATGACGACGCTGA+CGG | 0.617661 | 4_2:+68627543 | Msa0617930:CDS |
AGAACAAACAGCTGGCCGAA+TGG | 0.617898 | 4_2:+68636812 | Msa0617930:CDS |
GCAAACTTGATAAATAGCAT+CGG | 0.619098 | 4_2:-68637406 | None:intergenic |
GTCTGAATCAGCAGATGTGA+TGG | 0.620767 | 4_2:-68631777 | None:intergenic |
AGTGAAGCAGACTGAAGCAA+TGG | 0.623414 | 4_2:-68631740 | None:intergenic |
TGGGCCTAAGAGAGAGCTGT+CGG | 0.625244 | 4_2:-68635999 | None:intergenic |
TAGTGTATATGGATCGTGCT+CGG | 0.625715 | 4_2:+68637508 | Msa0617930:three_prime_UTR |
TCAACATCCTCGTGTAAGGT+GGG | 0.625966 | 4_2:+68628261 | Msa0617930:CDS |
AATAGTAGCGGTATTTGCAG+AGG | 0.628250 | 4_2:+68636042 | Msa0617930:CDS |
GAGTTGCTTATTGAACTGGC+GGG | 0.630138 | 4_2:+68627610 | Msa0617930:CDS |
AATCAAGACTAGTGTTCTGG+AGG | 0.630386 | 4_2:+68632213 | Msa0617930:CDS |
TGCGCTTGCTCAGATAGCCG+AGG | 0.633942 | 4_2:+68628050 | Msa0617930:CDS |
ATGGCACACTGCGGATACTG+AGG | 0.639017 | 4_2:+68627867 | Msa0617930:CDS |
TCCGGTGCAGCCAAATACGC+AGG | 0.640135 | 4_2:-68628000 | None:intergenic |
TGCTGTCATACCGTACCTGA+AGG | 0.640419 | 4_2:+68630779 | Msa0617930:CDS |
TAAAGAGGAAAACGAGCAGG+AGG | 0.642022 | 4_2:+68634036 | Msa0617930:CDS |
GCAAGTTCAATATCATCAAG+GGG | 0.642471 | 4_2:+68628333 | Msa0617930:CDS |
GCGCTTGCTCAGATAGCCGA+GGG | 0.646139 | 4_2:+68628051 | Msa0617930:CDS |
CTGGACGAACATACCCACAT+AGG | 0.647072 | 4_2:-68634274 | None:intergenic |
AGCGTGCTCCTGGTATGATG+AGG | 0.647250 | 4_2:+68627770 | Msa0617930:CDS |
ATAGCACGAGCTTCTTGATG+AGG | 0.650205 | 4_2:-68627055 | None:intergenic |
TGAGAAAATAGGGTTGTCTG+TGG | 0.650322 | 4_2:+68637279 | Msa0617930:three_prime_UTR |
AGCACGATCCATATACACTA+CGG | 0.651458 | 4_2:-68637505 | None:intergenic |
CTGAAACCTATCTCGATCGG+CGG | 0.652721 | 4_2:-68627509 | None:intergenic |
TCATGAAGGTGTTTGATATG+CGG | 0.655511 | 4_2:-68627388 | None:intergenic |
AAGGAAAGGTCACCTGTACG+CGG | 0.659871 | 4_2:-68628399 | None:intergenic |
TGCAATGCTTCAGATTGCGG+AGG | 0.663015 | 4_2:+68627678 | Msa0617930:intron |
TAGACTTAGCACGAAGCATG+CGG | 0.663457 | 4_2:-68630833 | None:intergenic |
GGTAAACAAATGGTGCAAGA+GGG | 0.663711 | 4_2:+68630613 | Msa0617930:CDS |
GGAAAGGTCACCTGTACGCG+GGG | 0.667372 | 4_2:-68628397 | None:intergenic |
GTTGCAGAGCAGTGTCGTGA+AGG | 0.667612 | 4_2:+68635082 | Msa0617930:CDS |
AGGTTATCGATATCTTTGGG+AGG | 0.678521 | 4_2:+68627943 | Msa0617930:intron |
TTGCTTTCGAAGAAGAATAG+CGG | 0.683007 | 4_2:-68627080 | None:intergenic |
ATACCTTCCCAAAATAGTAG+CGG | 0.684508 | 4_2:+68636030 | Msa0617930:CDS |
GGTGTTTGTGCTGAGTTTGG+GGG | 0.689686 | 4_2:+68635393 | Msa0617930:CDS |
TGTAAAGCAAGCTGTTGTTG+CGG | 0.689701 | 4_2:-68636906 | None:intergenic |
ATATTGAGGATGATCCGGCA+TGG | 0.693948 | 4_2:+68627848 | Msa0617930:CDS |
GATGATGACGACGCTGACGG+AGG | 0.697442 | 4_2:+68627546 | Msa0617930:CDS |
TGGACGAAAGACGAGGCCAG+AGG | 0.697746 | 4_2:-68627123 | None:intergenic |
CAAACTCAGCACAAACACCG+AGG | 0.699327 | 4_2:-68635389 | None:intergenic |
AACAACCTACTAATAAACTG+CGG | 0.712474 | 4_2:-68627799 | None:intergenic |
GTTACAACAATCCCAACTCG+CGG | 0.720105 | 4_2:+68626871 | Msa0617930:CDS |
GTGGAAGCAAGGGTAGCAGG+CGG | 0.721019 | 4_2:-68636867 | None:intergenic |
CGGCTGCAAAGATGACCAGG+TGG | 0.721639 | 4_2:-68636886 | None:intergenic |
CTTATGCAGAGGCTCTATCG+AGG | 0.722154 | 4_2:+68635507 | Msa0617930:intron |
CAAGCGCAATCAATGCAGCG+TGG | 0.723794 | 4_2:-68628035 | None:intergenic |
GTGCGATTGAGTCCAAAAGG+AGG | 0.724830 | 4_2:+68637189 | Msa0617930:three_prime_UTR |
ATGGCTGCCCACCTTACACG+AGG | 0.728704 | 4_2:-68628268 | None:intergenic |
TGGGTGTTGGACGAAAGACG+AGG | 0.753231 | 4_2:-68627130 | None:intergenic |
TGATCCGGCATGGCACACTG+CGG | 0.761351 | 4_2:+68627858 | Msa0617930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATTTATATTTTCATTTAAT+TGG | + | chr4_2:68630702-68630721 | Msa0617930:intron | 10.0% |
!!! | ATTTAAATATAGTTGATTTA+AGG | - | chr4_2:68631078-68631097 | None:intergenic | 10.0% |
!! | TTAAATCAACTATATTTAAA+TGG | + | chr4_2:68631077-68631096 | Msa0617930:intron | 10.0% |
!!! | AAGTTTTATTTATTATAGTA+TGG | + | chr4_2:68632159-68632178 | Msa0617930:intron | 10.0% |
!!! | AAGAAAAGATTATAAATTTT+AGG | - | chr4_2:68634826-68634845 | None:intergenic | 10.0% |
!!! | ATGTATATTTTGAATTTTTT+TGG | + | chr4_2:68636428-68636447 | Msa0617930:intron | 10.0% |
!!! | TGTATATTTTGAATTTTTTT+GGG | + | chr4_2:68636429-68636448 | Msa0617930:intron | 10.0% |
!!! | TTTTTTTTTGATGTTTATAA+AGG | - | chr4_2:68636485-68636504 | None:intergenic | 10.0% |
!! | TCATATTAGAATTCAATTTA+AGG | - | chr4_2:68628772-68628791 | None:intergenic | 15.0% |
!!! | ATGAAAATATGTGATTTTTT+TGG | + | chr4_2:68628788-68628807 | Msa0617930:intron | 15.0% |
!! | AAATATAATTAAAACGAAAG+AGG | - | chr4_2:68630122-68630141 | None:intergenic | 15.0% |
!! | ATAAATAATGACTTAACAAA+TGG | - | chr4_2:68630318-68630337 | None:intergenic | 15.0% |
!! | TTTATTAATTGAATAAACTG+TGG | + | chr4_2:68630333-68630352 | Msa0617930:intron | 15.0% |
!! | AACTATATTTAAATGGAAAA+GGG | + | chr4_2:68631084-68631103 | Msa0617930:intron | 15.0% |
!!! | ATGTGTTTAATATTTTGTTT+TGG | + | chr4_2:68631124-68631143 | Msa0617930:intron | 15.0% |
!! | AAATAATAATTGAAACAGTT+AGG | - | chr4_2:68632564-68632583 | None:intergenic | 15.0% |
!!! | TTAATAATTTGTTTCAGTTT+AGG | + | chr4_2:68632909-68632928 | Msa0617930:intron | 15.0% |
!! | TTAGATTGTTAAATATATGA+TGG | + | chr4_2:68633183-68633202 | Msa0617930:intron | 15.0% |
!! | TACATTTATGTACTAAAAAA+AGG | - | chr4_2:68633827-68633846 | None:intergenic | 15.0% |
!! | AAAATATTAAATTAGTCCAA+AGG | - | chr4_2:68634943-68634962 | None:intergenic | 15.0% |
!!! | TTTTTAGGTATTTTTTTGTT+AGG | + | chr4_2:68635758-68635777 | Msa0617930:intron | 15.0% |
!!! | TATAGAATGAGAAAATTTTA+TGG | - | chr4_2:68636285-68636304 | None:intergenic | 15.0% |
!!! | ATAAAATTTTCTCATTCTAT+AGG | + | chr4_2:68636284-68636303 | Msa0617930:intron | 15.0% |
!!! | AAAATTTTCCATTAATAGTT+TGG | + | chr4_2:68636322-68636341 | Msa0617930:intron | 15.0% |
!! | ATCAAAAAAAAAAAATCTAG+TGG | + | chr4_2:68636493-68636512 | Msa0617930:intron | 15.0% |
!!! | TAATTCTTTTTATGTTAACT+AGG | + | chr4_2:68636761-68636780 | Msa0617930:intron | 15.0% |
!! | AAAAAAAAAAACAATACAAC+AGG | - | chr4_2:68637325-68637344 | None:intergenic | 15.0% |
!!! | AATTTTATTCAGTGTTTATC+TGG | + | chr4_2:68627484-68627503 | Msa0617930:intron | 20.0% |
!!! | TAAATAAAAGCATAAAGCAA+CGG | - | chr4_2:68628157-68628176 | None:intergenic | 20.0% |
!!! | TATACATGTCTTATTTTGAA+AGG | + | chr4_2:68628183-68628202 | Msa0617930:intron | 20.0% |
!!! | AGAAATGGTTTTATCAATTT+AGG | + | chr4_2:68628552-68628571 | Msa0617930:intron | 20.0% |
!! | GTTTGTAATAGCTTAAAAAA+TGG | - | chr4_2:68628746-68628765 | None:intergenic | 20.0% |
!! | GAAATTGAATATATATCTCA+AGG | + | chr4_2:68629013-68629032 | Msa0617930:intron | 20.0% |
!! | GGAAACTAATAATAATTTCA+AGG | - | chr4_2:68629377-68629396 | None:intergenic | 20.0% |
!! | ACATATTATCTTATTGTTGT+TGG | + | chr4_2:68630008-68630027 | Msa0617930:intron | 20.0% |
!!! | CATATTATCTTATTGTTGTT+GGG | + | chr4_2:68630009-68630028 | Msa0617930:intron | 20.0% |
!!! | TATGTTTTTCTTTCAACTTA+GGG | - | chr4_2:68630074-68630093 | None:intergenic | 20.0% |
!!! | ATATGTTTTTCTTTCAACTT+AGG | - | chr4_2:68630075-68630094 | None:intergenic | 20.0% |
!! | TAAAGAATAGAACAAAACAA+AGG | - | chr4_2:68630272-68630291 | None:intergenic | 20.0% |
!!! | TTGTTTTGTTCTATTCTTTA+TGG | + | chr4_2:68630272-68630291 | Msa0617930:intron | 20.0% |
!! | AAATATAAATGTTGAAGAAC+AGG | - | chr4_2:68630693-68630712 | None:intergenic | 20.0% |
!! | CAACTATATTTAAATGGAAA+AGG | + | chr4_2:68631083-68631102 | Msa0617930:intron | 20.0% |
!!! | GTTTAATATTTTGTTTTGGT+AGG | + | chr4_2:68631128-68631147 | Msa0617930:intron | 20.0% |
!! | ATCATAAAAGATATTACAGA+TGG | - | chr4_2:68631455-68631474 | None:intergenic | 20.0% |
!! | GTACAAAAAAGAATGTTAAA+AGG | - | chr4_2:68632055-68632074 | None:intergenic | 20.0% |
!! | TTAGAAAGAAATGCAAATTT+GGG | - | chr4_2:68633002-68633021 | None:intergenic | 20.0% |
!! | TTTAGAAAGAAATGCAAATT+TGG | - | chr4_2:68633003-68633022 | None:intergenic | 20.0% |
!!! | ATAAATAATGGTAATGCATA+AGG | - | chr4_2:68633153-68633172 | None:intergenic | 20.0% |
!! | TCTCTTTGTACTTATTATTA+TGG | + | chr4_2:68633489-68633508 | Msa0617930:intron | 20.0% |
!! | TTTATGTACTAAAAAAAGGA+AGG | - | chr4_2:68633823-68633842 | None:intergenic | 20.0% |
!! | AATACAAAGAAATACTAACT+TGG | - | chr4_2:68634075-68634094 | None:intergenic | 20.0% |
!!! | AAGGTGTCAAATATTTTAAA+AGG | - | chr4_2:68634149-68634168 | None:intergenic | 20.0% |
!!! | CTTTGAGTTTTTAAAATTAG+TGG | + | chr4_2:68634475-68634494 | Msa0617930:intron | 20.0% |
!!! | TGATTTTTAGTCTATTGTTT+TGG | + | chr4_2:68634999-68635018 | Msa0617930:intron | 20.0% |
!! | AAAAGCTTGAACAATAAAAA+TGG | - | chr4_2:68635318-68635337 | None:intergenic | 20.0% |
!! | TATCTTAGTATTGTTAAACA+TGG | - | chr4_2:68635713-68635732 | None:intergenic | 20.0% |
!!! | AGATTTTTGTTTTTGATGAA+AGG | + | chr4_2:68636140-68636159 | Msa0617930:intron | 20.0% |
!! | TTGATGAAAGGAAATTTAAT+AGG | + | chr4_2:68636152-68636171 | Msa0617930:intron | 20.0% |
!!! | TAAGTGTACATGATTATTTT+TGG | + | chr4_2:68636236-68636255 | Msa0617930:intron | 20.0% |
!! | CAAAATATACATGTTTACAA+AGG | - | chr4_2:68636420-68636439 | None:intergenic | 20.0% |
!!! | TGAATTTTTTTGGGAAAAAT+TGG | + | chr4_2:68636438-68636457 | Msa0617930:intron | 20.0% |
!! | TATCATTAACCAAGAATTAA+CGG | + | chr4_2:68636536-68636555 | Msa0617930:intron | 20.0% |
!! | AATTTGTAGTTGTAAAAGTT+AGG | - | chr4_2:68636570-68636589 | None:intergenic | 20.0% |
!! | CTAAAAATAAATTACCTACT+CGG | - | chr4_2:68637562-68637581 | None:intergenic | 20.0% |
! | ACTGAAGAAAAATATCATGA+AGG | - | chr4_2:68627405-68627424 | None:intergenic | 25.0% |
!!! | ATGTTAGACTTTTTCCTTTT+TGG | + | chr4_2:68628093-68628112 | Msa0617930:intron | 25.0% |
! | TCATAACAACATAACCAAAA+AGG | - | chr4_2:68628110-68628129 | None:intergenic | 25.0% |
! | AAACTAACTAGTTAAACCAA+AGG | - | chr4_2:68628421-68628440 | None:intergenic | 25.0% |
!!! | GTCATTTTTAGTGTTTGTTT+AGG | + | chr4_2:68628521-68628540 | Msa0617930:intron | 25.0% |
!!! | GTTTAGGATTTTTAGAGAAA+TGG | + | chr4_2:68628537-68628556 | Msa0617930:intron | 25.0% |
!!! | AGATTTTTGTTGTCAACTTA+AGG | + | chr4_2:68629044-68629063 | Msa0617930:intron | 25.0% |
!!! | TTGGTTTTTCTTTCAACTTA+GGG | - | chr4_2:68629545-68629564 | None:intergenic | 25.0% |
!!! | ATTGGTTTTTCTTTCAACTT+AGG | - | chr4_2:68629546-68629565 | None:intergenic | 25.0% |
! | AAGTTGAAAGAAAAACCAAT+TGG | + | chr4_2:68629546-68629565 | Msa0617930:intron | 25.0% |
!!! | GATTTTTGTTGTGAACTTAA+AGG | + | chr4_2:68629600-68629619 | Msa0617930:intron | 25.0% |
! | TATTGTCGTTCACTTAAATT+TGG | + | chr4_2:68630571-68630590 | Msa0617930:intron | 25.0% |
! | ATTTCAGAATGGTAAACAAA+TGG | + | chr4_2:68630603-68630622 | Msa0617930:intron | 25.0% |
! | TTTACACTTTGATCTTCTTT+AGG | + | chr4_2:68630734-68630753 | Msa0617930:intron | 25.0% |
! | TGCAAAATATCAAGTTCAAA+TGG | - | chr4_2:68630967-68630986 | None:intergenic | 25.0% |
!! | ATTTTGCAATTGCAACTTAA+TGG | + | chr4_2:68630979-68630998 | Msa0617930:intron | 25.0% |
!! | TTTTGCAATTGCAACTTAAT+GGG | + | chr4_2:68630980-68630999 | Msa0617930:intron | 25.0% |
! | GAAAGAACGAAGTAATTTAA+TGG | - | chr4_2:68631056-68631075 | None:intergenic | 25.0% |
! | TTCTACCCAAATAATTAACT+AGG | - | chr4_2:68631209-68631228 | None:intergenic | 25.0% |
! | TAAAAGATATTACAGATGGT+GGG | - | chr4_2:68631451-68631470 | None:intergenic | 25.0% |
! | ATAAAAGATATTACAGATGG+TGG | - | chr4_2:68631452-68631471 | None:intergenic | 25.0% |
!!! | CTTTTATTTTGTAGCTTAAG+TGG | + | chr4_2:68631950-68631969 | Msa0617930:intron | 25.0% |
! | GCATCATAAAATAATTGATG+AGG | - | chr4_2:68632394-68632413 | None:intergenic | 25.0% |
!!! | CATCAATTATTTTATGATGC+AGG | + | chr4_2:68632394-68632413 | Msa0617930:intron | 25.0% |
! | TGGAAATAAAATTTAAGGAG+TGG | - | chr4_2:68632437-68632456 | None:intergenic | 25.0% |
! | AATGGACAAACATTAAGAAT+GGG | - | chr4_2:68632751-68632770 | None:intergenic | 25.0% |
! | ATTGTGAAATTCATATGTTC+TGG | + | chr4_2:68632783-68632802 | Msa0617930:intron | 25.0% |
! | TATACTCTCAAAACAAAAGA+CGG | - | chr4_2:68632828-68632847 | None:intergenic | 25.0% |
! | TAGGTATAAATTTGAGAATC+CGG | + | chr4_2:68632928-68632947 | Msa0617930:intron | 25.0% |
! | AAATATCATCTAGATTGATC+CGG | - | chr4_2:68632950-68632969 | None:intergenic | 25.0% |
! | AACAAGACAATCATAAAACA+GGG | - | chr4_2:68633373-68633392 | None:intergenic | 25.0% |
! | TAACAAGACAATCATAAAAC+AGG | - | chr4_2:68633374-68633393 | None:intergenic | 25.0% |
!!! | TTTTATGATTGTCTTGTTAG+AGG | + | chr4_2:68633375-68633394 | Msa0617930:intron | 25.0% |
! | TCTCATTAATACTTGATGTT+GGG | + | chr4_2:68633460-68633479 | Msa0617930:intron | 25.0% |
! | AAACAGTAGTAAAAAAACAG+AGG | - | chr4_2:68633613-68633632 | None:intergenic | 25.0% |
!!! | ATCAACTACTTATTTTTACG+AGG | + | chr4_2:68633644-68633663 | Msa0617930:intron | 25.0% |
! | ACATAAATGTAAACCACTAT+TGG | + | chr4_2:68633836-68633855 | Msa0617930:intron | 25.0% |
! | TTTAAACCTTCACATTTACT+TGG | + | chr4_2:68634099-68634118 | Msa0617930:intron | 25.0% |
!!! | GTGTCAAATATTTTAAAAGG+AGG | - | chr4_2:68634146-68634165 | None:intergenic | 25.0% |
! | AGAAAAACTAAATACAGATG+TGG | - | chr4_2:68634307-68634326 | None:intergenic | 25.0% |
!! | TAAGCAAACTACAATTTTCA+TGG | - | chr4_2:68634434-68634453 | None:intergenic | 25.0% |
!!! | TGAGTTTTTAAAATTAGTGG+TGG | + | chr4_2:68634478-68634497 | Msa0617930:intron | 25.0% |
!! | TTCTTTCAATGAACATTTTC+AGG | + | chr4_2:68634657-68634676 | Msa0617930:intron | 25.0% |
!!! | TAGTCTATTGTTTTGGATAT+AGG | + | chr4_2:68635006-68635025 | Msa0617930:intron | 25.0% |
!!! | AGTCTATTGTTTTGGATATA+GGG | + | chr4_2:68635007-68635026 | Msa0617930:intron | 25.0% |
! | TACTCAATATAACAAAAGGT+TGG | - | chr4_2:68635475-68635494 | None:intergenic | 25.0% |
!! | GTGTTACTCAATATAACAAA+AGG | - | chr4_2:68635479-68635498 | None:intergenic | 25.0% |
!!! | TTTTCTTTTACCTGCTTTTA+TGG | + | chr4_2:68635674-68635693 | Msa0617930:intron | 25.0% |
!!! | AACTGTTTGAGTTTCTTTTT+AGG | + | chr4_2:68635743-68635762 | Msa0617930:intron | 25.0% |
! | TCAATCAAATCACCTTTAAT+GGG | - | chr4_2:68635861-68635880 | None:intergenic | 25.0% |
!! | CTTTTTGGATAGCTTAATTT+AGG | - | chr4_2:68636115-68636134 | None:intergenic | 25.0% |
!!! | ACAAAAATCTGTTCACTTTT+TGG | - | chr4_2:68636130-68636149 | None:intergenic | 25.0% |
!!! | ATTTTTGTCCTGTTGTTTTT+CGG | - | chr4_2:68636215-68636234 | None:intergenic | 25.0% |
!!! | ACATGATTATTTTTGGCATA+TGG | + | chr4_2:68636243-68636262 | Msa0617930:intron | 25.0% |
!!! | AAATATATGCTCACTTTTCT+AGG | - | chr4_2:68636354-68636373 | None:intergenic | 25.0% |
! | AATTAACTAGTTGTACAGAA+AGG | - | chr4_2:68636667-68636686 | None:intergenic | 25.0% |
!! | TTTTCTCGGATAATACATAT+TGG | + | chr4_2:68636708-68636727 | Msa0617930:intron | 25.0% |
! | GAAAGGGAAAGAAAAAAAAA+AGG | - | chr4_2:68637351-68637370 | None:intergenic | 25.0% |
! | TCAAAATCTGATATCAGAAA+GGG | - | chr4_2:68637367-68637386 | None:intergenic | 25.0% |
! | TTCAAAATCTGATATCAGAA+AGG | - | chr4_2:68637368-68637387 | None:intergenic | 25.0% |
! | GGTTAATTCTGATGTTTATT+TGG | + | chr4_2:68637529-68637548 | Msa0617930:three_prime_UTR | 25.0% |
! | TCTGATGTTTATTTGGATAT+TGG | + | chr4_2:68637536-68637555 | Msa0617930:three_prime_UTR | 25.0% |
!!! | ATATTTAGTTTTTGAGCGTT+TGG | + | chr4_2:68637609-68637628 | Msa0617930:three_prime_UTR | 25.0% |
!! | CGAAATCGATTTAGCATTTT+CGG | - | chr4_2:68627194-68627213 | None:intergenic | 30.0% |
! | TCCAGTATTTTACCAGATAA+CGG | + | chr4_2:68627247-68627266 | Msa0617930:intron | 30.0% |
AAACATAAACGGAAGCAATT+CGG | - | chr4_2:68627278-68627297 | None:intergenic | 30.0% | |
AACAACCTACTAATAAACTG+CGG | - | chr4_2:68627802-68627821 | None:intergenic | 30.0% | |
! | TATTCTGATGAAGATGCTTT+TGG | + | chr4_2:68627825-68627844 | Msa0617930:CDS | 30.0% |
GATAGGTTATCGATATCTTT+GGG | + | chr4_2:68627940-68627959 | Msa0617930:intron | 30.0% | |
!! | GATAAAAACTTTAGAGCAAG+TGG | + | chr4_2:68628210-68628229 | Msa0617930:CDS | 30.0% |
CAATTGTCCAATTGCATTAA+TGG | - | chr4_2:68628290-68628309 | None:intergenic | 30.0% | |
TGATATTGAACTTGCAAATC+CGG | - | chr4_2:68628328-68628347 | None:intergenic | 30.0% | |
TTGCAAGTTCAATATCATCA+AGG | + | chr4_2:68628331-68628350 | Msa0617930:CDS | 30.0% | |
TGCAAGTTCAATATCATCAA+GGG | + | chr4_2:68628332-68628351 | Msa0617930:CDS | 30.0% | |
AACTAGTTAAACCAAAGGAA+AGG | - | chr4_2:68628416-68628435 | None:intergenic | 30.0% | |
! | TAGTTTTCTCGCAACTATTA+AGG | + | chr4_2:68628435-68628454 | Msa0617930:intron | 30.0% |
! | AGTTTTCTCGCAACTATTAA+GGG | + | chr4_2:68628436-68628455 | Msa0617930:intron | 30.0% |
!! | TTTTCAGCAAAGTGCTTTTT+TGG | + | chr4_2:68628576-68628595 | Msa0617930:intron | 30.0% |
AAGTTGACAACAAAAATCTG+AGG | - | chr4_2:68629043-68629062 | None:intergenic | 30.0% | |
AAAAGCAGGAAATAACATGA+CGG | + | chr4_2:68629116-68629135 | Msa0617930:intron | 30.0% | |
! | GACTAAACCTTTTTCTTCAA+CGG | + | chr4_2:68629189-68629208 | Msa0617930:intron | 30.0% |
! | TTTTCATCCGTTGAAGAAAA+AGG | - | chr4_2:68629199-68629218 | None:intergenic | 30.0% |
! | TATTATTAGTTTCCATCCGT+TGG | + | chr4_2:68629383-68629402 | Msa0617930:intron | 30.0% |
ACAATGATAAACATCATTGC+AGG | + | chr4_2:68629441-68629460 | Msa0617930:intron | 30.0% | |
TAGGTTTCTCATTATCTTCT+TGG | + | chr4_2:68629499-68629518 | Msa0617930:intron | 30.0% | |
ACTTAAAGGTTAAAAACGAG+TGG | + | chr4_2:68629614-68629633 | Msa0617930:intron | 30.0% | |
CTTAAAGGTTAAAAACGAGT+GGG | + | chr4_2:68629615-68629634 | Msa0617930:intron | 30.0% | |
! | GACAAAACCTTTTTCTTCAA+TGG | + | chr4_2:68629737-68629756 | Msa0617930:intron | 30.0% |
! | AAACCTTTTTCTTCAATGGA+TGG | + | chr4_2:68629741-68629760 | Msa0617930:intron | 30.0% |
TTACCATCCATTGAAGAAAA+AGG | - | chr4_2:68629747-68629766 | None:intergenic | 30.0% | |
GATGGTAACTGATACTTTAA+AGG | + | chr4_2:68629759-68629778 | Msa0617930:intron | 30.0% | |
!!! | AAGCTTTTTTCTTCAACAGA+TGG | - | chr4_2:68629947-68629966 | None:intergenic | 30.0% |
TTTCCTAATATTGTTCACAC+AGG | + | chr4_2:68630365-68630384 | Msa0617930:intron | 30.0% | |
AAGTATGGCGTTAAAATTTC+AGG | - | chr4_2:68630435-68630454 | None:intergenic | 30.0% | |
!! | TGAAATTTTAACGCCATACT+TGG | + | chr4_2:68630434-68630453 | Msa0617930:CDS | 30.0% |
!! | TACTTCTTCAGGTTAGTTTA+TGG | + | chr4_2:68630481-68630500 | Msa0617930:intron | 30.0% |
GGATATTCTGTATTTCAGAA+TGG | + | chr4_2:68630592-68630611 | Msa0617930:intron | 30.0% | |
TGACAGCATCATAATATTTC+TGG | - | chr4_2:68630767-68630786 | None:intergenic | 30.0% | |
AGAACGAAGTAATTTAATGG+TGG | - | chr4_2:68631053-68631072 | None:intergenic | 30.0% | |
ATAGCAAGATCACAAAATGT+AGG | - | chr4_2:68631175-68631194 | None:intergenic | 30.0% | |
CCAAATAATTAACTAGGATC+GGG | - | chr4_2:68631203-68631222 | None:intergenic | 30.0% | |
CCCAAATAATTAACTAGGAT+CGG | - | chr4_2:68631204-68631223 | None:intergenic | 30.0% | |
CCGATCCTAGTTAATTATTT+GGG | + | chr4_2:68631201-68631220 | Msa0617930:intron | 30.0% | |
TTCTACCCAAATAATTACCA+AGG | - | chr4_2:68631287-68631306 | None:intergenic | 30.0% | |
ATGTTAGATTGAAACTAGGA+TGG | - | chr4_2:68631315-68631334 | None:intergenic | 30.0% | |
AAAAGATATTACAGATGGTG+GGG | - | chr4_2:68631450-68631469 | None:intergenic | 30.0% | |
AGTAAAGAACCATGATATGT+AGG | - | chr4_2:68631492-68631511 | None:intergenic | 30.0% | |
ACATATCATGGTTCTTTACT+AGG | + | chr4_2:68631492-68631511 | Msa0617930:intron | 30.0% | |
CTTATACACAAATTGCCAAT+TGG | + | chr4_2:68631613-68631632 | Msa0617930:intron | 30.0% | |
!!! | TGACAGGTTTTATTTGTTAC+AGG | + | chr4_2:68631652-68631671 | Msa0617930:intron | 30.0% |
!!! | GTTTTATTTGTTACAGGCAT+GGG | + | chr4_2:68631658-68631677 | Msa0617930:intron | 30.0% |
! | GCAAGATTTTCTTCCTTATA+TGG | + | chr4_2:68631703-68631722 | Msa0617930:CDS | 30.0% |
! | TAGATGATTCTGATGATGAA+AGG | + | chr4_2:68631807-68631826 | Msa0617930:CDS | 30.0% |
! | GAGAAAAGTGTGTGATAAAA+GGG | - | chr4_2:68631879-68631898 | None:intergenic | 30.0% |
! | AGAGAAAAGTGTGTGATAAA+AGG | - | chr4_2:68631880-68631899 | None:intergenic | 30.0% |
!! | TGTAGTGTTTGTTATCCAAA+TGG | + | chr4_2:68631979-68631998 | Msa0617930:intron | 30.0% |
CCTCGTGGAAATAAAATTTA+AGG | - | chr4_2:68632442-68632461 | None:intergenic | 30.0% | |
!! | CCTTAAATTTTATTTCCACG+AGG | + | chr4_2:68632439-68632458 | Msa0617930:CDS | 30.0% |
!! | TAAATTTTATTTCCACGAGG+AGG | + | chr4_2:68632442-68632461 | Msa0617930:CDS | 30.0% |
ATGGACAAACATTAAGAATG+GGG | - | chr4_2:68632750-68632769 | None:intergenic | 30.0% | |
GAATGGACAAACATTAAGAA+TGG | - | chr4_2:68632752-68632771 | None:intergenic | 30.0% | |
CACAATAAAACAGCAAAGAA+TGG | - | chr4_2:68632769-68632788 | None:intergenic | 30.0% | |
AGAAATTTGTGCAAGTATGT+TGG | + | chr4_2:68633060-68633079 | Msa0617930:CDS | 30.0% | |
TTCAGTAAATGAATGCTTAC+AGG | + | chr4_2:68633084-68633103 | Msa0617930:CDS | 30.0% | |
TAAATGAATGCTTACAGGTT+CGG | + | chr4_2:68633089-68633108 | Msa0617930:intron | 30.0% | |
!! | GTAGACTGTTTTTCTATAAG+AGG | - | chr4_2:68633241-68633260 | None:intergenic | 30.0% |
GTCTCATTAATACTTGATGT+TGG | + | chr4_2:68633459-68633478 | Msa0617930:intron | 30.0% | |
TGATATTATTGTTCACGTGA+AGG | + | chr4_2:68633748-68633767 | Msa0617930:intron | 30.0% | |
TATAAGAGAACATCCAATAG+TGG | - | chr4_2:68633852-68633871 | None:intergenic | 30.0% | |
!!! | GTTTTTGTTTTACAGATCTC+CGG | + | chr4_2:68633875-68633894 | Msa0617930:intron | 30.0% |
!!! | TTTTTGTTTTACAGATCTCC+GGG | + | chr4_2:68633876-68633895 | Msa0617930:intron | 30.0% |
AATAGTTGAAGAGGTAAAAC+AGG | + | chr4_2:68633928-68633947 | Msa0617930:CDS | 30.0% | |
GATGACAATTCTTCAAAGAA+AGG | - | chr4_2:68634244-68634263 | None:intergenic | 30.0% | |
! | ATCTTATTTGACTCCTATGT+GGG | + | chr4_2:68634261-68634280 | Msa0617930:CDS | 30.0% |
ACTCTAAATACTTAAGAGCA+GGG | - | chr4_2:68634584-68634603 | None:intergenic | 30.0% | |
AACTCTAAATACTTAAGAGC+AGG | - | chr4_2:68634585-68634604 | None:intergenic | 30.0% | |
! | GTTTCATTTTGCAAATTGAC+TGG | + | chr4_2:68634878-68634897 | Msa0617930:intron | 30.0% |
!!! | TATTGTTTTGGATATAGGGA+AGG | + | chr4_2:68635011-68635030 | Msa0617930:intron | 30.0% |
!!! | ATTGTTTTGGATATAGGGAA+GGG | + | chr4_2:68635012-68635031 | Msa0617930:intron | 30.0% |
TATCATAATACCTGCTCAAT+TGG | - | chr4_2:68635199-68635218 | None:intergenic | 30.0% | |
TACATATCTTCCATTCTTGT+TGG | + | chr4_2:68635217-68635236 | Msa0617930:CDS | 30.0% | |
! | AGCTTTTCGATTGTTGATAT+TGG | + | chr4_2:68635331-68635350 | Msa0617930:intron | 30.0% |
! | GTATTTCTTCATATTTCTGC+AGG | + | chr4_2:68635353-68635372 | Msa0617930:intron | 30.0% |
TCATATGCCATTACATTATC+TGG | - | chr4_2:68635569-68635588 | None:intergenic | 30.0% | |
AAAAATTTGCCAATTTCACC+AGG | + | chr4_2:68635610-68635629 | Msa0617930:CDS | 30.0% | |
GGGAAAATAAATAAAGACCT+GGG | - | chr4_2:68635651-68635670 | None:intergenic | 30.0% | |
AGGGAAAATAAATAAAGACC+TGG | - | chr4_2:68635652-68635671 | None:intergenic | 30.0% | |
AAGCAGGTAAAAGAAAAACA+GGG | - | chr4_2:68635671-68635690 | None:intergenic | 30.0% | |
AAAGCAGGTAAAAGAAAAAC+AGG | - | chr4_2:68635672-68635691 | None:intergenic | 30.0% | |
AAGAACAAAACCATAAAAGC+AGG | - | chr4_2:68635687-68635706 | None:intergenic | 30.0% | |
CTCAATCAAATCACCTTTAA+TGG | - | chr4_2:68635862-68635881 | None:intergenic | 30.0% | |
CATTAAAGGTGATTTGATTG+AGG | + | chr4_2:68635860-68635879 | Msa0617930:CDS | 30.0% | |
!!! | TTTTTTTTGTCCTATTGCTC+TGG | + | chr4_2:68635948-68635967 | Msa0617930:intron | 30.0% |
AAAATTAGAACCAGAGCAAT+AGG | - | chr4_2:68635961-68635980 | None:intergenic | 30.0% | |
! | AATTTTCCTTGTATATCTGC+AGG | + | chr4_2:68635975-68635994 | Msa0617930:intron | 30.0% |
GGATAGCTTAATTTAGGTAA+AGG | - | chr4_2:68636109-68636128 | None:intergenic | 30.0% | |
! | AAAATTTTGAACGCTTGACA+TGG | - | chr4_2:68636310-68636329 | None:intergenic | 30.0% |
TATAAACGTTATGAACAGAG+AGG | - | chr4_2:68636625-68636644 | None:intergenic | 30.0% | |
GAAAGGCTTATAAATATCAG+AGG | - | chr4_2:68636650-68636669 | None:intergenic | 30.0% | |
! | ATTAATTGACTTCACAATCC+AGG | + | chr4_2:68636684-68636703 | Msa0617930:intron | 30.0% |
ACTATGCAAACTATGAAGAA+AGG | - | chr4_2:68636938-68636957 | None:intergenic | 30.0% | |
CATCTTATGGCAAAAAGAAT+GGG | - | chr4_2:68637069-68637088 | None:intergenic | 30.0% | |
ATGTGTATATTGAGTGTTCA+TGG | + | chr4_2:68637167-68637186 | Msa0617930:three_prime_UTR | 30.0% | |
GGCAAGAACAAAATAAAAAG+AGG | - | chr4_2:68637251-68637270 | None:intergenic | 30.0% | |
GCAAACTTGATAAATAGCAT+CGG | - | chr4_2:68637409-68637428 | None:intergenic | 30.0% | |
ATCGACGACAAATTATTACT+TGG | - | chr4_2:68637447-68637466 | None:intergenic | 30.0% | |
! | TTGTTGTAACTGAGTTGACT+CGG | - | chr4_2:68626861-68626880 | None:intergenic | 35.0% |
TTGCTTTCGAAGAAGAATAG+CGG | - | chr4_2:68627083-68627102 | None:intergenic | 35.0% | |
ACCGTTATCTGGTAAAATAC+TGG | - | chr4_2:68627251-68627270 | None:intergenic | 35.0% | |
!! | GTATTTTACCAGATAACGGT+TGG | + | chr4_2:68627251-68627270 | Msa0617930:intron | 35.0% |
AACATAAACGGAAGCAATTC+GGG | - | chr4_2:68627277-68627296 | None:intergenic | 35.0% | |
GAAACGCACTGAAACATAAA+CGG | - | chr4_2:68627289-68627308 | None:intergenic | 35.0% | |
!! | TCATGAAGGTGTTTGATATG+CGG | - | chr4_2:68627391-68627410 | None:intergenic | 35.0% |
! | GAAGATGCTTTTGGATATTG+AGG | + | chr4_2:68627834-68627853 | Msa0617930:CDS | 35.0% |
TTTGGATATTGAGGATGATC+CGG | + | chr4_2:68627843-68627862 | Msa0617930:CDS | 35.0% | |
GAATCTAGCAACTATAGTGT+TGG | + | chr4_2:68627904-68627923 | Msa0617930:CDS | 35.0% | |
GGATAGGTTATCGATATCTT+TGG | + | chr4_2:68627939-68627958 | Msa0617930:intron | 35.0% | |
! | TACAATTGTTCCTGTTGCTT+CGG | + | chr4_2:68627969-68627988 | Msa0617930:CDS | 35.0% |
!! | AAAAACTTTAGAGCAAGTGG+TGG | + | chr4_2:68628213-68628232 | Msa0617930:CDS | 35.0% |
! | TGGACAATTGTCTACTGATT+TGG | + | chr4_2:68628300-68628319 | Msa0617930:CDS | 35.0% |
!! | GGACAATTGTCTACTGATTT+GGG | + | chr4_2:68628301-68628320 | Msa0617930:CDS | 35.0% |
GCAAGTTCAATATCATCAAG+GGG | + | chr4_2:68628333-68628352 | Msa0617930:CDS | 35.0% | |
TTAAGGTCTAAAGAACGAGT+GGG | + | chr4_2:68629061-68629080 | Msa0617930:intron | 35.0% | |
!! | TATTTCCTGCTTTTGTTGCT+GGG | - | chr4_2:68629110-68629129 | None:intergenic | 35.0% |
!! | TTATTTCCTGCTTTTGTTGC+TGG | - | chr4_2:68629111-68629130 | None:intergenic | 35.0% |
AAAGCAGGAAATAACATGAC+GGG | + | chr4_2:68629117-68629136 | Msa0617930:intron | 35.0% | |
GACGATAATGAACATCATCA+TGG | - | chr4_2:68629148-68629167 | None:intergenic | 35.0% | |
TTTCTTCAACGGATGAAAAC+TGG | + | chr4_2:68629200-68629219 | Msa0617930:intron | 35.0% | |
TGTTAGACGATTCTTGGAAT+CGG | - | chr4_2:68629311-68629330 | None:intergenic | 35.0% | |
! | AAGTGTTGTTAGACGATTCT+TGG | - | chr4_2:68629317-68629336 | None:intergenic | 35.0% |
ATTTCATTGCCTTTGTTGCT+AGG | + | chr4_2:68629480-68629499 | Msa0617930:intron | 35.0% | |
AATGAGAAACCTAGCAACAA+AGG | - | chr4_2:68629492-68629511 | None:intergenic | 35.0% | |
!! | TTGGTTTTTCACTCGTTCTT+TGG | + | chr4_2:68629518-68629537 | Msa0617930:intron | 35.0% |
! | TATTTCCACCTTTTGTGGTT+GGG | - | chr4_2:68629664-68629683 | None:intergenic | 35.0% |
! | TTATTTCCACCTTTTGTGGT+TGG | - | chr4_2:68629665-68629684 | None:intergenic | 35.0% |
!!! | CATGTTATTTCCACCTTTTG+TGG | - | chr4_2:68629669-68629688 | None:intergenic | 35.0% |
ATGGAAACTGAGAATTCCAA+GGG | - | chr4_2:68629928-68629947 | None:intergenic | 35.0% | |
TGGGTTTCTCATTATCTTCT+TGG | + | chr4_2:68630028-68630047 | Msa0617930:intron | 35.0% | |
!! | ATTTTAACGCCATACTTGGA+TGG | + | chr4_2:68630438-68630457 | Msa0617930:CDS | 35.0% |
CTAACTATTCCATCCAAGTA+TGG | - | chr4_2:68630450-68630469 | None:intergenic | 35.0% | |
CAAATTGCTTGTACTTCTTC+AGG | + | chr4_2:68630470-68630489 | Msa0617930:CDS | 35.0% | |
AGTGATAGTAGCATTGCTAT+TGG | - | chr4_2:68630517-68630536 | None:intergenic | 35.0% | |
ATAGCAATGCTACTATCACT+AGG | + | chr4_2:68630517-68630536 | Msa0617930:intron | 35.0% | |
TAGCAATGCTACTATCACTA+GGG | + | chr4_2:68630518-68630537 | Msa0617930:intron | 35.0% | |
GTCTATGGAATGCATAAGTT+TGG | + | chr4_2:68630851-68630870 | Msa0617930:CDS | 35.0% | |
ATGGAATGCATAAGTTTGGT+TGG | + | chr4_2:68630855-68630874 | Msa0617930:CDS | 35.0% | |
ATGCATAAGTTTGGTTGGAA+TGG | + | chr4_2:68630860-68630879 | Msa0617930:CDS | 35.0% | |
TGTCGGAAAGGAGAAATTTA+GGG | + | chr4_2:68630884-68630903 | Msa0617930:CDS | 35.0% | |
TGGAGTTCGACAGAAATATA+TGG | - | chr4_2:68630947-68630966 | None:intergenic | 35.0% | |
! | AGTAATTTAATGGTGGAGTG+TGG | - | chr4_2:68631046-68631065 | None:intergenic | 35.0% |
TTTGGTAGGATCTTAGATCT+TGG | + | chr4_2:68631142-68631161 | Msa0617930:intron | 35.0% | |
AATAATTAACTAGGATCGGG+AGG | - | chr4_2:68631200-68631219 | None:intergenic | 35.0% | |
CCCGATCCTAGTTAATTATT+TGG | + | chr4_2:68631200-68631219 | Msa0617930:intron | 35.0% | |
CCAAATAATTACCAAGGATC+GGG | - | chr4_2:68631281-68631300 | None:intergenic | 35.0% | |
CCCAAATAATTACCAAGGAT+CGG | - | chr4_2:68631282-68631301 | None:intergenic | 35.0% | |
! | CCGATCCTTGGTAATTATTT+GGG | + | chr4_2:68631279-68631298 | Msa0617930:intron | 35.0% |
CAGCATGTTAGATTGAAACT+AGG | - | chr4_2:68631319-68631338 | None:intergenic | 35.0% | |
AGTTTCAATCTAACATGCTG+CGG | + | chr4_2:68631319-68631338 | Msa0617930:intron | 35.0% | |
! | AGAATGCATTCTCTTTTCTG+CGG | + | chr4_2:68631397-68631416 | Msa0617930:intron | 35.0% |
! | AAAGATATTACAGATGGTGG+GGG | - | chr4_2:68631449-68631468 | None:intergenic | 35.0% |
CTTTACCATCCTACATATCA+TGG | + | chr4_2:68631480-68631499 | Msa0617930:intron | 35.0% | |
AAGAACCATGATATGTAGGA+TGG | - | chr4_2:68631488-68631507 | None:intergenic | 35.0% | |
!! | TGTAGCATGTAACTTGTTGT+TGG | - | chr4_2:68631568-68631587 | None:intergenic | 35.0% |
AACAACAAGTTACATGCTAC+AGG | + | chr4_2:68631567-68631586 | Msa0617930:CDS | 35.0% | |
TACTGAACATATGGTCCAAT+TGG | - | chr4_2:68631631-68631650 | None:intergenic | 35.0% | |
!! | ACCATATGTTCAGTATTGAC+AGG | + | chr4_2:68631636-68631655 | Msa0617930:intron | 35.0% |
ACCTGTCAATACTGAACATA+TGG | - | chr4_2:68631640-68631659 | None:intergenic | 35.0% | |
!!! | GGTTTTATTTGTTACAGGCA+TGG | + | chr4_2:68631657-68631676 | Msa0617930:intron | 35.0% |
GGCATGACAAATTCCATATA+AGG | - | chr4_2:68631719-68631738 | None:intergenic | 35.0% | |
! | GTGAAGAGCATATAACCATT+TGG | - | chr4_2:68631997-68632016 | None:intergenic | 35.0% |
ATTTCACATGCTTCACACAT+GGG | + | chr4_2:68632017-68632036 | Msa0617930:intron | 35.0% | |
AGTATGGAAACTATCACTCT+CGG | + | chr4_2:68632175-68632194 | Msa0617930:intron | 35.0% | |
GAATCCTTCTTTCAACTCAT+CGG | - | chr4_2:68632275-68632294 | None:intergenic | 35.0% | |
TGAAAGAAGGATTCTTTCCA+TGG | + | chr4_2:68632281-68632300 | Msa0617930:CDS | 35.0% | |
! | ATTCTTTCCATGGATTGATC+AGG | + | chr4_2:68632291-68632310 | Msa0617930:CDS | 35.0% |
! | TATTTTATGATGCAGGTTGC+AGG | + | chr4_2:68632401-68632420 | Msa0617930:intron | 35.0% |
GATCATTCTCATACCTGAAA+CGG | - | chr4_2:68632480-68632499 | None:intergenic | 35.0% | |
! | GAGAATGATCGTTTGTGTTT+TGG | + | chr4_2:68632490-68632509 | Msa0617930:intron | 35.0% |
CAATATCTCTATAGCAATGC+CGG | + | chr4_2:68632585-68632604 | Msa0617930:intron | 35.0% | |
CAAAGTTAGCCATTGAGAAA+GGG | + | chr4_2:68632623-68632642 | Msa0617930:CDS | 35.0% | |
TGTGAATTACAGCAACAACT+AGG | - | chr4_2:68633209-68633228 | None:intergenic | 35.0% | |
TAAAACAGGGCGAAATCAAA+CGG | - | chr4_2:68633360-68633379 | None:intergenic | 35.0% | |
!!! | CTACTTATTTTTACGAGGCA+AGG | + | chr4_2:68633649-68633668 | Msa0617930:intron | 35.0% |
! | AAAAGAGATGGAGAGTACAT+GGG | - | chr4_2:68633680-68633699 | None:intergenic | 35.0% |
! | AAAAAGAGATGGAGAGTACA+TGG | - | chr4_2:68633681-68633700 | None:intergenic | 35.0% |
TTGCAGTGAACAAAAAGAGA+TGG | - | chr4_2:68633692-68633711 | None:intergenic | 35.0% | |
! | CTCTCTTTTTCTACTTGAAC+TGG | - | chr4_2:68633963-68633982 | None:intergenic | 35.0% |
AGCATCAAAATCTTCAGCTT+GGG | - | chr4_2:68633999-68634018 | None:intergenic | 35.0% | |
!! | TGAAGATTTTGATGCTGAAG+AGG | + | chr4_2:68634003-68634022 | Msa0617930:CDS | 35.0% |
!! | GAAGATTTTGATGCTGAAGA+GGG | + | chr4_2:68634004-68634023 | Msa0617930:CDS | 35.0% |
!! | AAGATTTTGATGCTGAAGAG+GGG | + | chr4_2:68634005-68634024 | Msa0617930:CDS | 35.0% |
! | ATTTGACACCTTTGTTTGCT+TGG | + | chr4_2:68634157-68634176 | Msa0617930:intron | 35.0% |
!!! | TGCTTTGAAGGTTTTGATCA+AGG | - | chr4_2:68634212-68634231 | None:intergenic | 35.0% |
TTCTTCAAAGAAAGGCAAGA+AGG | - | chr4_2:68634236-68634255 | None:intergenic | 35.0% | |
! | CATCTTATTTGACTCCTATG+TGG | + | chr4_2:68634260-68634279 | Msa0617930:CDS | 35.0% |
! | CAATCACCACAACTTTAAGA+AGG | - | chr4_2:68634394-68634413 | None:intergenic | 35.0% |
GAAAACAGACAGAAAATCAG+AGG | - | chr4_2:68634693-68634712 | None:intergenic | 35.0% | |
CACTGAACAAATCAAGAACA+AGG | - | chr4_2:68634744-68634763 | None:intergenic | 35.0% | |
AATATCACTGCATGCTTAAG+TGG | - | chr4_2:68635139-68635158 | None:intergenic | 35.0% | |
ATATCTTCCATTCTTGTTGG+AGG | + | chr4_2:68635220-68635239 | Msa0617930:CDS | 35.0% | |
GCTTCATCCAGATAATGTAA+TGG | + | chr4_2:68635559-68635578 | Msa0617930:CDS | 35.0% | |
TCACGATCAACTTTGTTCTA+TGG | + | chr4_2:68635893-68635912 | Msa0617930:CDS | 35.0% | |
!! | TGGGAAGGTATTGATTGTTT+GGG | - | chr4_2:68636021-68636040 | None:intergenic | 35.0% |
!! | TTGGGAAGGTATTGATTGTT+TGG | - | chr4_2:68636022-68636041 | None:intergenic | 35.0% |
ATACCTTCCCAAAATAGTAG+CGG | + | chr4_2:68636030-68636049 | Msa0617930:CDS | 35.0% | |
! | GCAAATACCGCTACTATTTT+GGG | - | chr4_2:68636040-68636059 | None:intergenic | 35.0% |
! | TGCAAATACCGCTACTATTT+TGG | - | chr4_2:68636041-68636060 | None:intergenic | 35.0% |
GCTTAATTTAGGTAAAGGCA+GGG | - | chr4_2:68636104-68636123 | None:intergenic | 35.0% | |
AGCTTAATTTAGGTAAAGGC+AGG | - | chr4_2:68636105-68636124 | None:intergenic | 35.0% | |
TAAGCAATCATACTTCCACT+GGG | - | chr4_2:68636192-68636211 | None:intergenic | 35.0% | |
ATTGCTTACCGAAAAACAAC+AGG | + | chr4_2:68636204-68636223 | Msa0617930:intron | 35.0% | |
! | TTCACAATCCAGGTTTTTCT+CGG | + | chr4_2:68636694-68636713 | Msa0617930:intron | 35.0% |
TGTATTATCCGAGAAAAACC+TGG | - | chr4_2:68636705-68636724 | None:intergenic | 35.0% | |
!! | GTTAACTAGGTTTTATGTGC+TGG | + | chr4_2:68636774-68636793 | Msa0617930:intron | 35.0% |
GTCTGAGTAAACTAACCATT+CGG | - | chr4_2:68636830-68636849 | None:intergenic | 35.0% | |
TGCAAACTATGAAGAAAGGA+TGG | - | chr4_2:68636934-68636953 | None:intergenic | 35.0% | |
AAATATAGAGACCACCAAAC+TGG | - | chr4_2:68637042-68637061 | None:intergenic | 35.0% | |
CCATCTTATGGCAAAAAGAA+TGG | - | chr4_2:68637070-68637089 | None:intergenic | 35.0% | |
! | CCATTCTTTTTGCCATAAGA+TGG | + | chr4_2:68637067-68637086 | Msa0617930:three_prime_UTR | 35.0% |
! | GAATGATGGAAACCATCTTA+TGG | - | chr4_2:68637082-68637101 | None:intergenic | 35.0% |
CCATATGCAAGAATGAATGA+TGG | - | chr4_2:68637096-68637115 | None:intergenic | 35.0% | |
CCATCATTCATTCTTGCATA+TGG | + | chr4_2:68637093-68637112 | Msa0617930:three_prime_UTR | 35.0% | |
!! | ATGGTGTTTTTATAGCAGCA+TGG | + | chr4_2:68637112-68637131 | Msa0617930:three_prime_UTR | 35.0% |
CACAGATTCAGGAATATAAG+TGG | - | chr4_2:68637481-68637500 | None:intergenic | 35.0% | |
! | TGTTGTAACTGAGTTGACTC+GGG | - | chr4_2:68626860-68626879 | None:intergenic | 40.0% |
TGTGAGATCAGAGTCTCAAA+CGG | - | chr4_2:68626920-68626939 | None:intergenic | 40.0% | |
AAGCGATTTGAGAGAAGCTT+GGG | - | chr4_2:68627152-68627171 | None:intergenic | 40.0% | |
GCTCAATTGTCGCAGTATAT+TGG | + | chr4_2:68627352-68627371 | Msa0617930:CDS | 40.0% | |
AAAGCAGCAATTCTGACATC+AGG | - | chr4_2:68627451-68627470 | None:intergenic | 40.0% | |
ATCCTGAAACCTATCTCGAT+CGG | - | chr4_2:68627515-68627534 | None:intergenic | 40.0% | |
! | GCTTGAGTTGCTTATTGAAC+TGG | + | chr4_2:68627606-68627625 | Msa0617930:CDS | 40.0% |
TGAGTTGCTTATTGAACTGG+CGG | + | chr4_2:68627609-68627628 | Msa0617930:CDS | 40.0% | |
ATCTGCCTCCTTAAAAACCT+TGG | - | chr4_2:68627643-68627662 | None:intergenic | 40.0% | |
AGGCAGATTGTTGATGTTGT+TGG | + | chr4_2:68627655-68627674 | Msa0617930:intron | 40.0% | |
TGATTACTCTTGCTGAAGCT+AGG | + | chr4_2:68627746-68627765 | Msa0617930:CDS | 40.0% | |
GATTACTCTTGCTGAAGCTA+GGG | + | chr4_2:68627747-68627766 | Msa0617930:CDS | 40.0% | |
AGATGCCGCAGTTTATTAGT+AGG | + | chr4_2:68627794-68627813 | Msa0617930:CDS | 40.0% | |
! | TAGCAACTATAGTGTTGGAC+AGG | + | chr4_2:68627909-68627928 | Msa0617930:CDS | 40.0% |
AGGTTATCGATATCTTTGGG+AGG | + | chr4_2:68627943-68627962 | Msa0617930:intron | 40.0% | |
GGAACAATTACCTGCGTATT+TGG | + | chr4_2:68627990-68628009 | Msa0617930:CDS | 40.0% | |
!! | ATTGTCTACTGATTTGGGTC+CGG | + | chr4_2:68628306-68628325 | Msa0617930:CDS | 40.0% |
! | TTGGAAGTGTGTAAGAGCTA+TGG | + | chr4_2:68628807-68628826 | Msa0617930:intron | 40.0% |
CTTAAGGTCTAAAGAACGAG+TGG | + | chr4_2:68629060-68629079 | Msa0617930:intron | 40.0% | |
! | TGGGTTCGTCATTCTTTTGT+TGG | - | chr4_2:68629091-68629110 | None:intergenic | 40.0% |
AAGCAGGAAATAACATGACG+GGG | + | chr4_2:68629118-68629137 | Msa0617930:intron | 40.0% | |
GGTTTAGTCTACTACACTCA+AGG | - | chr4_2:68629178-68629197 | None:intergenic | 40.0% | |
GTTAGACGATTCTTGGAATC+GGG | - | chr4_2:68629310-68629329 | None:intergenic | 40.0% | |
ATGTCCTTGACGGTTATTCT+AGG | - | chr4_2:68629345-68629364 | None:intergenic | 40.0% | |
GACATTGACAATGTCCTTGA+CGG | - | chr4_2:68629355-68629374 | None:intergenic | 40.0% | |
TTTCCATCCGTTGGAGAAAA+AGG | + | chr4_2:68629392-68629411 | Msa0617930:intron | 40.0% | |
! | GACAAAGCCTTTTTCTCCAA+CGG | - | chr4_2:68629402-68629421 | None:intergenic | 40.0% |
ACACACACACACAAACCAAT+TGG | - | chr4_2:68629564-68629583 | None:intergenic | 40.0% | |
GTTTGTGTGTGTGTGTATCA+AGG | + | chr4_2:68629568-68629587 | Msa0617930:intron | 40.0% | |
GTGTGTATCAAGGACTAGAT+TGG | + | chr4_2:68629578-68629597 | Msa0617930:intron | 40.0% | |
TGGGAAAACCTACAAGAGAA+TGG | + | chr4_2:68629634-68629653 | Msa0617930:intron | 40.0% | |
!! | GGTTTTGTCTACTACAGTCA+AGG | - | chr4_2:68629726-68629745 | None:intergenic | 40.0% |
! | ATGTCCTTGATGGTTGATCA+CGG | + | chr4_2:68629794-68629813 | Msa0617930:intron | 40.0% |
CGATACTTGGAATCATGTGA+AGG | - | chr4_2:68629855-68629874 | None:intergenic | 40.0% | |
GATGGAAACTGAGAATTCCA+AGG | - | chr4_2:68629929-68629948 | None:intergenic | 40.0% | |
TTGGTTTCTCACTCGTTCTT+TGG | + | chr4_2:68630047-68630066 | Msa0617930:intron | 40.0% | |
GAGCCTGTGTGAACAATATT+AGG | - | chr4_2:68630371-68630390 | None:intergenic | 40.0% | |
TGGTAAACAAATGGTGCAAG+AGG | + | chr4_2:68630612-68630631 | Msa0617930:CDS | 40.0% | |
GGTAAACAAATGGTGCAAGA+GGG | + | chr4_2:68630613-68630632 | Msa0617930:CDS | 40.0% | |
!! | ATCAGTTGCTGATTCATCTC+AGG | + | chr4_2:68630654-68630673 | Msa0617930:CDS | 40.0% |
ACCAATATAGCCTTCAGGTA+CGG | - | chr4_2:68630792-68630811 | None:intergenic | 40.0% | |
CATTGACCAATATAGCCTTC+AGG | - | chr4_2:68630797-68630816 | None:intergenic | 40.0% | |
CTGTCGGAAAGGAGAAATTT+AGG | + | chr4_2:68630883-68630902 | Msa0617930:CDS | 40.0% | |
! | CAACTTAATGGGTCAAGAGT+GGG | + | chr4_2:68630991-68631010 | Msa0617930:intron | 40.0% |
AATAATTACCAAGGATCGGG+AGG | - | chr4_2:68631278-68631297 | None:intergenic | 40.0% | |
! | CCCGATCCTTGGTAATTATT+TGG | + | chr4_2:68631278-68631297 | Msa0617930:intron | 40.0% |
CCTGACTAAAGATCAGTAGA+GGG | - | chr4_2:68631353-68631372 | None:intergenic | 40.0% | |
TCCTGACTAAAGATCAGTAG+AGG | - | chr4_2:68631354-68631373 | None:intergenic | 40.0% | |
!! | AAGATATTACAGATGGTGGG+GGG | - | chr4_2:68631448-68631467 | None:intergenic | 40.0% |
CATGGTTCTTTACTAGGTCA+TGG | + | chr4_2:68631498-68631517 | Msa0617930:intron | 40.0% | |
GAAGTTCTTATGTCCTTGCA+AGG | + | chr4_2:68631520-68631539 | Msa0617930:CDS | 40.0% | |
CATTTCACATGCTTCACACA+TGG | + | chr4_2:68632016-68632035 | Msa0617930:intron | 40.0% | |
ACTCTCGGTGACAAAAGAAT+TGG | + | chr4_2:68632190-68632209 | Msa0617930:CDS | 40.0% | |
TGGAATCAAGACTAGTGTTC+TGG | + | chr4_2:68632210-68632229 | Msa0617930:CDS | 40.0% | |
AATCAAGACTAGTGTTCTGG+AGG | + | chr4_2:68632213-68632232 | Msa0617930:CDS | 40.0% | |
! | TATGCCGATGAGTTGAAAGA+AGG | + | chr4_2:68632268-68632287 | Msa0617930:CDS | 40.0% |
AGTCTAACCTGATCAATCCA+TGG | - | chr4_2:68632301-68632320 | None:intergenic | 40.0% | |
!! | TATGCAAAAGCGTTCGATAG+TGG | - | chr4_2:68632336-68632355 | None:intergenic | 40.0% |
TTTGCAGATCGTAATAGCTC+CGG | - | chr4_2:68632607-68632626 | None:intergenic | 40.0% | |
GCAAAGTTAGCCATTGAGAA+AGG | + | chr4_2:68632622-68632641 | Msa0617930:CDS | 40.0% | |
TTGAGATTGCCCTTTCTCAA+TGG | - | chr4_2:68632635-68632654 | None:intergenic | 40.0% | |
ATTGAGAAAGGGCAATCTCA+AGG | + | chr4_2:68632634-68632653 | Msa0617930:CDS | 40.0% | |
!! | TTTGGTGGAAGCATTGCATA+AGG | + | chr4_2:68632705-68632724 | Msa0617930:CDS | 40.0% |
! | ATTTGGGATTCATCCAATCC+AGG | - | chr4_2:68632986-68633005 | None:intergenic | 40.0% |
TCCTGCAATCAAACAGAAGT+GGG | - | chr4_2:68633031-68633050 | None:intergenic | 40.0% | |
TTCCTGCAATCAAACAGAAG+TGG | - | chr4_2:68633032-68633051 | None:intergenic | 40.0% | |
CTTGCACAAATTTCTGTGTC+AGG | - | chr4_2:68633055-68633074 | None:intergenic | 40.0% | |
CACAAACTTCCCCTATTTCA+CGG | + | chr4_2:68633427-68633446 | Msa0617930:intron | 40.0% | |
AGAGTTGTTCCGTGAAATAG+GGG | - | chr4_2:68633439-68633458 | None:intergenic | 40.0% | |
CAGAGTTGTTCCGTGAAATA+GGG | - | chr4_2:68633440-68633459 | None:intergenic | 40.0% | |
ACAGAGTTGTTCCGTGAAAT+AGG | - | chr4_2:68633441-68633460 | None:intergenic | 40.0% | |
! | AGTGAAGGCACATCAAATTC+TGG | - | chr4_2:68633554-68633573 | None:intergenic | 40.0% |
TTGATGTGCCTTCACTATCA+AGG | + | chr4_2:68633558-68633577 | Msa0617930:intron | 40.0% | |
!!! | CTTTTCATCCAAAAGCATCC+CGG | - | chr4_2:68633897-68633916 | None:intergenic | 40.0% |
! | GATGCTTTTGGATGAAAAGC+AGG | + | chr4_2:68633898-68633917 | Msa0617930:CDS | 40.0% |
GGTCAAGTCAATAGTTGAAG+AGG | + | chr4_2:68633919-68633938 | Msa0617930:CDS | 40.0% | |
AAAAAGAGAGAGAGCAGAGA+GGG | + | chr4_2:68633973-68633992 | Msa0617930:CDS | 40.0% | |
CAGCATCAAAATCTTCAGCT+TGG | - | chr4_2:68634000-68634019 | None:intergenic | 40.0% | |
!! | AGATTTTGATGCTGAAGAGG+GGG | + | chr4_2:68634006-68634025 | Msa0617930:CDS | 40.0% |
GATTAAAGAGGAAAACGAGC+AGG | + | chr4_2:68634033-68634052 | Msa0617930:CDS | 40.0% | |
TAGCAGCCAAGTAAATGTGA+AGG | - | chr4_2:68634108-68634127 | None:intergenic | 40.0% | |
TTTAAGAAGGTCCAGGTTCA+GGG | - | chr4_2:68634381-68634400 | None:intergenic | 40.0% | |
ATTGCAATCCTTCTCTCTTC+AGG | - | chr4_2:68635046-68635065 | None:intergenic | 40.0% | |
TATTTCGTTGCCAATTGAGC+AGG | + | chr4_2:68635186-68635205 | Msa0617930:intron | 40.0% | |
TTACATGCCTCCAACAAGAA+TGG | - | chr4_2:68635230-68635249 | None:intergenic | 40.0% | |
TGAAACTCCAGATGTTAGAC+AGG | + | chr4_2:68635253-68635272 | Msa0617930:CDS | 40.0% | |
ATGCTAACCTGTCTAACATC+TGG | - | chr4_2:68635263-68635282 | None:intergenic | 40.0% | |
TCTGTGTTCAAACCTCTTGT+TGG | + | chr4_2:68635417-68635436 | Msa0617930:CDS | 40.0% | |
CACATTTGTGACTTATGCAG+AGG | + | chr4_2:68635496-68635515 | Msa0617930:intron | 40.0% | |
TTATCTGGATGAAGCGCATT+AGG | - | chr4_2:68635554-68635573 | None:intergenic | 40.0% | |
CAATACTGTCCTGGTGAAAT+TGG | - | chr4_2:68635622-68635641 | None:intergenic | 40.0% | |
TTGAACTGTCTGCCCATTAA+AGG | + | chr4_2:68635846-68635865 | Msa0617930:CDS | 40.0% | |
CGATCAACTTTGTTCTATGG+CGG | + | chr4_2:68635896-68635915 | Msa0617930:CDS | 40.0% | |
!! | ATACCGCTACTATTTTGGGA+AGG | - | chr4_2:68636036-68636055 | None:intergenic | 40.0% |
AATAGTAGCGGTATTTGCAG+AGG | + | chr4_2:68636042-68636061 | Msa0617930:CDS | 40.0% | |
GAAAACAAAGCTATACCCAG+TGG | + | chr4_2:68636174-68636193 | Msa0617930:intron | 40.0% | |
GTAAGCAATCATACTTCCAC+TGG | - | chr4_2:68636193-68636212 | None:intergenic | 40.0% | |
CATATGGCTACAACAGTAGT+AGG | + | chr4_2:68636259-68636278 | Msa0617930:intron | 40.0% | |
! | GAGTTTGTGCCGTTAATTCT+TGG | - | chr4_2:68636548-68636567 | None:intergenic | 40.0% |
GAGAGGCTTATAAACATCAG+AGG | - | chr4_2:68636608-68636627 | None:intergenic | 40.0% | |
TGTAAAGCAAGCTGTTGTTG+CGG | - | chr4_2:68636909-68636928 | None:intergenic | 40.0% | |
ATCGTTTCTCCATAGCATCT+GGG | + | chr4_2:68636974-68636993 | Msa0617930:three_prime_UTR | 40.0% | |
!! | GGAACAAGCTTTTTCCAGTT+TGG | + | chr4_2:68637025-68637044 | Msa0617930:three_prime_UTR | 40.0% |
!! | ACAAGCTTTTTCCAGTTTGG+TGG | + | chr4_2:68637028-68637047 | Msa0617930:three_prime_UTR | 40.0% |
! | ACAACTGTCTAACCTCCTTT+TGG | - | chr4_2:68637204-68637223 | None:intergenic | 40.0% |
AGGTTAGACAGTTGTTGCAT+CGG | + | chr4_2:68637209-68637228 | Msa0617930:three_prime_UTR | 40.0% | |
! | CCCTATTTTCTCACGCAATA+CGG | - | chr4_2:68637272-68637291 | None:intergenic | 40.0% |
CCGTATTGCGTGAGAAAATA+GGG | + | chr4_2:68637269-68637288 | Msa0617930:three_prime_UTR | 40.0% | |
TGAGAAAATAGGGTTGTCTG+TGG | + | chr4_2:68637279-68637298 | Msa0617930:three_prime_UTR | 40.0% | |
GAGAAAATAGGGTTGTCTGT+GGG | + | chr4_2:68637280-68637299 | Msa0617930:three_prime_UTR | 40.0% | |
AGAAAATAGGGTTGTCTGTG+GGG | + | chr4_2:68637281-68637300 | Msa0617930:three_prime_UTR | 40.0% | |
TGTGACTTCCGTAGTGTATA+TGG | + | chr4_2:68637497-68637516 | Msa0617930:three_prime_UTR | 40.0% | |
AGCACGATCCATATACACTA+CGG | - | chr4_2:68637508-68637527 | None:intergenic | 40.0% | |
TAGTGTATATGGATCGTGCT+CGG | + | chr4_2:68637508-68637527 | Msa0617930:three_prime_UTR | 40.0% | |
TATTTGGATATTGGCCGAGT+AGG | + | chr4_2:68637545-68637564 | Msa0617930:three_prime_UTR | 40.0% | |
!! | TGAGCGTTTGGTGTATTAGA+TGG | + | chr4_2:68637621-68637640 | Msa0617930:three_prime_UTR | 40.0% |
GTTACAACAATCCCAACTCG+CGG | + | chr4_2:68626871-68626890 | Msa0617930:CDS | 45.0% | |
!! | AGTCTCAAACGGTGATGGAT+CGG | - | chr4_2:68626909-68626928 | None:intergenic | 45.0% |
ATCAGAGTCTCAAACGGTGA+TGG | - | chr4_2:68626914-68626933 | None:intergenic | 45.0% | |
TTGAGAACGTTCTTCGTTGG+TGG | - | chr4_2:68626954-68626973 | None:intergenic | 45.0% | |
ATAGCACGAGCTTCTTGATG+AGG | - | chr4_2:68627058-68627077 | None:intergenic | 45.0% | |
TTTGAGAGAAGCTTGGGTGT+TGG | - | chr4_2:68627146-68627165 | None:intergenic | 45.0% | |
GAAGCGATTTGAGAGAAGCT+TGG | - | chr4_2:68627153-68627172 | None:intergenic | 45.0% | |
GAGTTGCTTATTGAACTGGC+GGG | + | chr4_2:68627610-68627629 | Msa0617930:CDS | 45.0% | |
AGTTGCTTATTGAACTGGCG+GGG | + | chr4_2:68627611-68627630 | Msa0617930:CDS | 45.0% | |
! | GGACTGAGCCAAGGTTTTTA+AGG | + | chr4_2:68627632-68627651 | Msa0617930:CDS | 45.0% |
!! | CTGAGCCAAGGTTTTTAAGG+AGG | + | chr4_2:68627635-68627654 | Msa0617930:CDS | 45.0% |
TGGTGCAATGCTTCAGATTG+CGG | + | chr4_2:68627675-68627694 | Msa0617930:intron | 45.0% | |
! | AGGCTGAGTCTTTAGAGGAA+GGG | + | chr4_2:68627698-68627717 | Msa0617930:CDS | 45.0% |
! | AGTCTTTAGAGGAAGGGACT+AGG | + | chr4_2:68627704-68627723 | Msa0617930:CDS | 45.0% |
ATATTGAGGATGATCCGGCA+TGG | + | chr4_2:68627848-68627867 | Msa0617930:CDS | 45.0% | |
!! | TAGTGTTGGACAGGAGTGTT+TGG | + | chr4_2:68627918-68627937 | Msa0617930:intron | 45.0% |
!! | TTGGACAGGAGTGTTTGGAT+AGG | + | chr4_2:68627923-68627942 | Msa0617930:intron | 45.0% |
GGTAATTGTTCCGAAGCAAC+AGG | - | chr4_2:68627982-68628001 | None:intergenic | 45.0% | |
! | TTTAGAGCAAGTGGTGGCTA+TGG | + | chr4_2:68628219-68628238 | Msa0617930:CDS | 45.0% |
ACGAGGATGTTGATCAGGAA+AGG | - | chr4_2:68628254-68628273 | None:intergenic | 45.0% | |
CTTACACGAGGATGTTGATC+AGG | - | chr4_2:68628259-68628278 | None:intergenic | 45.0% | |
CTGATCAACATCCTCGTGTA+AGG | + | chr4_2:68628257-68628276 | Msa0617930:CDS | 45.0% | |
ATCAACATCCTCGTGTAAGG+TGG | + | chr4_2:68628260-68628279 | Msa0617930:CDS | 45.0% | |
TCAACATCCTCGTGTAAGGT+GGG | + | chr4_2:68628261-68628280 | Msa0617930:CDS | 45.0% | |
TGGGCAGCCATTAATGCAAT+TGG | + | chr4_2:68628280-68628299 | Msa0617930:CDS | 45.0% | |
! | GGGATTCTGGAAATCATCCA+TGG | - | chr4_2:68628380-68628399 | None:intergenic | 45.0% |
AGCAGGAAATAACATGACGG+GGG | + | chr4_2:68629119-68629138 | Msa0617930:intron | 45.0% | |
GTGTCCTAGAATAACCGTCA+AGG | + | chr4_2:68629338-68629357 | Msa0617930:intron | 45.0% | |
! | AAGCCTTTTTCTCCAACGGA+TGG | - | chr4_2:68629398-68629417 | None:intergenic | 45.0% |
TGGGTTTGCCATTCTCTTGT+AGG | - | chr4_2:68629645-68629664 | None:intergenic | 45.0% | |
ATGGCAAACCCAACCACAAA+AGG | + | chr4_2:68629653-68629672 | Msa0617930:intron | 45.0% | |
TGCTGCTGTTAGACGATACT+TGG | - | chr4_2:68629868-68629887 | None:intergenic | 45.0% | |
AACTGATGCCAAAGCAGTCA+AGG | - | chr4_2:68630641-68630660 | None:intergenic | 45.0% | |
ACCGTACCTGAAGGCTATAT+TGG | + | chr4_2:68630788-68630807 | Msa0617930:CDS | 45.0% | |
TAGACTTAGCACGAAGCATG+CGG | - | chr4_2:68630836-68630855 | None:intergenic | 45.0% | |
CATGCTTCGTGCTAAGTCTA+TGG | + | chr4_2:68630836-68630855 | Msa0617930:CDS | 45.0% | |
AGTTTGGTTGGAATGGCTGT+CGG | + | chr4_2:68630867-68630886 | Msa0617930:CDS | 45.0% | |
! | ATTTAGGGCTGATGCTAAGC+AGG | + | chr4_2:68630899-68630918 | Msa0617930:CDS | 45.0% |
! | GCAACTTAATGGGTCAAGAG+TGG | + | chr4_2:68630990-68631009 | Msa0617930:intron | 45.0% |
AATCTAACATGCTGCGGTCT+TGG | + | chr4_2:68631325-68631344 | Msa0617930:intron | 45.0% | |
CCCTCTACTGATCTTTAGTC+AGG | + | chr4_2:68631350-68631369 | Msa0617930:intron | 45.0% | |
!! | AGATATTACAGATGGTGGGG+GGG | - | chr4_2:68631447-68631466 | None:intergenic | 45.0% |
GTCCTTGCAAGGATCACAAA+TGG | + | chr4_2:68631531-68631550 | Msa0617930:CDS | 45.0% | |
CTCCATTTGTGATCCTTGCA+AGG | - | chr4_2:68631536-68631555 | None:intergenic | 45.0% | |
AGTGAAGCAGACTGAAGCAA+TGG | - | chr4_2:68631743-68631762 | None:intergenic | 45.0% | |
GTCTGAATCAGCAGATGTGA+TGG | - | chr4_2:68631780-68631799 | None:intergenic | 45.0% | |
! | AAGCGTTCGATAGTGGTCTA+AGG | - | chr4_2:68632329-68632348 | None:intergenic | 45.0% |
! | TCGAACGCTTTTGCATACTG+AGG | + | chr4_2:68632339-68632358 | Msa0617930:intron | 45.0% |
! | GTTAGAAAAGCTGCCGTTTC+AGG | + | chr4_2:68632464-68632483 | Msa0617930:CDS | 45.0% |
AGAAAGGGCAATCTCAAGGT+CGG | + | chr4_2:68632638-68632657 | Msa0617930:CDS | 45.0% | |
TGACAGTATCATCCCAGCTT+TGG | + | chr4_2:68632687-68632706 | Msa0617930:CDS | 45.0% | |
TATTTGTGCTGCACTTTGCC+TGG | + | chr4_2:68632965-68632984 | Msa0617930:intron | 45.0% | |
TCCCACTTCTGTTTGATTGC+AGG | + | chr4_2:68633027-68633046 | Msa0617930:intron | 45.0% | |
AAGTAACAACAGTGCCAGTG+GGG | - | chr4_2:68633269-68633288 | None:intergenic | 45.0% | |
CAAGTAACAACAGTGCCAGT+GGG | - | chr4_2:68633270-68633289 | None:intergenic | 45.0% | |
TCAAGTAACAACAGTGCCAG+TGG | - | chr4_2:68633271-68633290 | None:intergenic | 45.0% | |
!! | ATTCGACGCCTTGATAGTGA+AGG | - | chr4_2:68633569-68633588 | None:intergenic | 45.0% |
GAAAAAGAGAGAGAGCAGAG+AGG | + | chr4_2:68633972-68633991 | Msa0617930:CDS | 45.0% | |
TAAAGAGGAAAACGAGCAGG+AGG | + | chr4_2:68634036-68634055 | Msa0617930:CDS | 45.0% | |
AAAGGAGGACCAGCAAACAA+AGG | - | chr4_2:68634131-68634150 | None:intergenic | 45.0% | |
GATAGCAGCCAAGCAAACAA+AGG | - | chr4_2:68634168-68634187 | None:intergenic | 45.0% | |
TTGTTTGCTTGGCTGCTATC+AGG | + | chr4_2:68634168-68634187 | Msa0617930:intron | 45.0% | |
TATCAGGTGGGCGAGATATT+GGG | + | chr4_2:68634184-68634203 | Msa0617930:intron | 45.0% | |
AGGCAAGAAGGATGCTTTGA+AGG | - | chr4_2:68634224-68634243 | None:intergenic | 45.0% | |
ATACAGATGTGGTAGCTTCC+TGG | - | chr4_2:68634296-68634315 | None:intergenic | 45.0% | |
! | CTTTAAGAAGGTCCAGGTTC+AGG | - | chr4_2:68634382-68634401 | None:intergenic | 45.0% |
! | CCACAACTTTAAGAAGGTCC+AGG | - | chr4_2:68634388-68634407 | None:intergenic | 45.0% |
CCTGGACCTTCTTAAAGTTG+TGG | + | chr4_2:68634385-68634404 | Msa0617930:intron | 45.0% | |
! | TCATGCAGTCTAAGATGCAC+AGG | - | chr4_2:68634785-68634804 | None:intergenic | 45.0% |
ACTTCGAGCAGATTTCCTAC+AGG | + | chr4_2:68634910-68634929 | Msa0617930:intron | 45.0% | |
TCCTACAGGATTTGAGCCTT+TGG | + | chr4_2:68634924-68634943 | Msa0617930:intron | 45.0% | |
TCCAAAGGCTCAAATCCTGT+AGG | - | chr4_2:68634928-68634947 | None:intergenic | 45.0% | |
ACAAGACTCCTGAAGAGAGA+AGG | + | chr4_2:68635035-68635054 | Msa0617930:CDS | 45.0% | |
! | CTTCATATTTCTGCAGGCAG+CGG | + | chr4_2:68635359-68635378 | Msa0617930:intron | 45.0% |
! | TCGGTGTTTGTGCTGAGTTT+GGG | + | chr4_2:68635391-68635410 | Msa0617930:CDS | 45.0% |
GTGTTCAAACCTCTTGTTGG+AGG | + | chr4_2:68635420-68635439 | Msa0617930:CDS | 45.0% | |
TAAGCAGTACCTCCAACAAG+AGG | - | chr4_2:68635432-68635451 | None:intergenic | 45.0% | |
GATGAAGCGCATTAGGATGT+TGG | - | chr4_2:68635547-68635566 | None:intergenic | 45.0% | |
TGACAATGCAGTTTCTGCTC+TGG | + | chr4_2:68635586-68635605 | Msa0617930:CDS | 45.0% | |
GACAATGCAGTTTCTGCTCT+GGG | + | chr4_2:68635587-68635606 | Msa0617930:CDS | 45.0% | |
TAATCTCCTGCTGCATTTGC+AGG | + | chr4_2:68635809-68635828 | Msa0617930:intron | 45.0% | |
! | AACTTTGTTCTATGGCGGAG+AGG | + | chr4_2:68635901-68635920 | Msa0617930:CDS | 45.0% |
GGCAGTCGCCAAACTATTAA+TGG | - | chr4_2:68636333-68636352 | None:intergenic | 45.0% | |
CAGCTGTTTGTTCTGTTGCA+AGG | - | chr4_2:68636806-68636825 | None:intergenic | 45.0% | |
CTTGCAACAGAACAAACAGC+TGG | + | chr4_2:68636804-68636823 | Msa0617930:CDS | 45.0% | |
CATCGTTTCTCCATAGCATC+TGG | + | chr4_2:68636973-68636992 | Msa0617930:three_prime_UTR | 45.0% | |
TTTCTCCATAGCATCTGGGT+TGG | + | chr4_2:68636978-68636997 | Msa0617930:three_prime_UTR | 45.0% | |
!! | AGTTGGTGTCTCGCACTTTT+TGG | + | chr4_2:68637002-68637021 | Msa0617930:three_prime_UTR | 45.0% |
!! | GTTGGTGTCTCGCACTTTTT+GGG | + | chr4_2:68637003-68637022 | Msa0617930:three_prime_UTR | 45.0% |
!! | TTGGTGTCTCGCACTTTTTG+GGG | + | chr4_2:68637004-68637023 | Msa0617930:three_prime_UTR | 45.0% |
ATGGTGCGATTGAGTCCAAA+AGG | + | chr4_2:68637186-68637205 | Msa0617930:three_prime_UTR | 45.0% | |
GCCGTATTGCGTGAGAAAAT+AGG | + | chr4_2:68637268-68637287 | Msa0617930:three_prime_UTR | 45.0% | |
ACTACGGAAGTCACAGATTC+AGG | - | chr4_2:68637492-68637511 | None:intergenic | 45.0% | |
!!! | AAATTCTAAAAAATAAATAA+TGG | - | chr4_2:68633165-68633184 | None:intergenic | 5.0% |
GGCTTGAGAACGTTCTTCGT+TGG | - | chr4_2:68626957-68626976 | None:intergenic | 50.0% | |
GCAGAGGTTGAAGAGAGCTT+CGG | - | chr4_2:68626978-68626997 | None:intergenic | 50.0% | |
!! | CTGGATCGGTTTGTTTGCAG+AGG | - | chr4_2:68626994-68627013 | None:intergenic | 50.0% |
CAAAACGAGTGCGTCTGGAT+CGG | - | chr4_2:68627008-68627027 | None:intergenic | 50.0% | |
AGCTTCAAAACGAGTGCGTC+TGG | - | chr4_2:68627013-68627032 | None:intergenic | 50.0% | |
!!! | GACGCACTCGTTTTGAAGCT+AGG | + | chr4_2:68627013-68627032 | Msa0617930:intron | 50.0% |
CGCGTGATGATTCATTCCTC+TGG | + | chr4_2:68627107-68627126 | Msa0617930:CDS | 50.0% | |
AATTCGGGCCAACCGTTATC+TGG | - | chr4_2:68627262-68627281 | None:intergenic | 50.0% | |
CTGAAACCTATCTCGATCGG+CGG | - | chr4_2:68627512-68627531 | None:intergenic | 50.0% | |
! | GGCGTTGAATTCAGGTCAAG+AGG | + | chr4_2:68627567-68627586 | Msa0617930:CDS | 50.0% |
TCAAGAGGCAACTGCTCAAG+AGG | + | chr4_2:68627582-68627601 | Msa0617930:CDS | 50.0% | |
TGCAATGCTTCAGATTGCGG+AGG | + | chr4_2:68627678-68627697 | Msa0617930:intron | 50.0% | |
! | GAGGCTGAGTCTTTAGAGGA+AGG | + | chr4_2:68627697-68627716 | Msa0617930:CDS | 50.0% |
AGAGGAAGGGACTAGGCATT+TGG | + | chr4_2:68627711-68627730 | Msa0617930:CDS | 50.0% | |
GGCATCTTCCTCATCATACC+AGG | - | chr4_2:68627781-68627800 | None:intergenic | 50.0% | |
GATACTGAGGATGAGGATGC+TGG | + | chr4_2:68627880-68627899 | Msa0617930:CDS | 50.0% | |
GACTACCTTTGAGCTTCCCT+CGG | - | chr4_2:68628070-68628089 | None:intergenic | 50.0% | |
AGGGAAGCTCAAAGGTAGTC+AGG | + | chr4_2:68628070-68628089 | Msa0617930:intron | 50.0% | |
ATCATCCATGGCAGCAGCTA+GGG | - | chr4_2:68628368-68628387 | None:intergenic | 50.0% | |
AATCATCCATGGCAGCAGCT+AGG | - | chr4_2:68628369-68628388 | None:intergenic | 50.0% | |
AAGGAAAGGTCACCTGTACG+CGG | - | chr4_2:68628402-68628421 | None:intergenic | 50.0% | |
CGTACAGGTGACCTTTCCTT+TGG | + | chr4_2:68628402-68628421 | Msa0617930:intron | 50.0% | |
ACGAACCCAGCAACAAAAGC+AGG | + | chr4_2:68629102-68629121 | Msa0617930:intron | 50.0% | |
! | ACGTCCTTGATGGTTGATCC+TGG | + | chr4_2:68629243-68629262 | Msa0617930:intron | 50.0% |
GACTCCAGGATCAACCATCA+AGG | - | chr4_2:68629250-68629269 | None:intergenic | 50.0% | |
!! | GTAGCAGCAACATTGACTCC+AGG | - | chr4_2:68629264-68629283 | None:intergenic | 50.0% |
CGATTCTTGGAATCGGGTGA+AGG | - | chr4_2:68629304-68629323 | None:intergenic | 50.0% | |
GCAAACCCAACCACAAAAGG+TGG | + | chr4_2:68629656-68629675 | Msa0617930:intron | 50.0% | |
GTCGTCGACAATGTCCTTGA+TGG | + | chr4_2:68629784-68629803 | Msa0617930:intron | 50.0% | |
GACTCCGTGATCAACCATCA+AGG | - | chr4_2:68629801-68629820 | None:intergenic | 50.0% | |
ATGTCCTTGACGGTTGCTCT+AGG | - | chr4_2:68629897-68629916 | None:intergenic | 50.0% | |
!! | GGCATCGACAATGTCCTTGA+CGG | - | chr4_2:68629907-68629926 | None:intergenic | 50.0% |
AAGGACATTGTCGATGCCCT+TGG | + | chr4_2:68629909-68629928 | Msa0617930:intron | 50.0% | |
TGCTGTCATACCGTACCTGA+AGG | + | chr4_2:68630779-68630798 | Msa0617930:CDS | 50.0% | |
! | CTTAATGGGTCAAGAGTGGG+TGG | + | chr4_2:68630994-68631013 | Msa0617930:intron | 50.0% |
GTGGAGTGTGGTTGAAGAAG+TGG | - | chr4_2:68631034-68631053 | None:intergenic | 50.0% | |
!! | ATATTACAGATGGTGGGGGG+GGG | - | chr4_2:68631445-68631464 | None:intergenic | 50.0% |
!! | GATATTACAGATGGTGGGGG+GGG | - | chr4_2:68631446-68631465 | None:intergenic | 50.0% |
GCTAGACTCTGCAAGTGTCT+GGG | + | chr4_2:68631680-68631699 | Msa0617930:CDS | 50.0% | |
CTAGACTCTGCAAGTGTCTG+GGG | + | chr4_2:68631681-68631700 | Msa0617930:CDS | 50.0% | |
GAAGCAGACTGAAGCAATGG+TGG | - | chr4_2:68631740-68631759 | None:intergenic | 50.0% | |
! | GCAGATGTGATGGTAACGTC+AGG | - | chr4_2:68631770-68631789 | None:intergenic | 50.0% |
GATGCAGGTTGCAGGAACTT+TGG | + | chr4_2:68632409-68632428 | Msa0617930:intron | 50.0% | |
! | CAGCTTTTCTAACCTCCTCG+TGG | - | chr4_2:68632457-68632476 | None:intergenic | 50.0% |
GAAAGGGCAATCTCAAGGTC+GGG | + | chr4_2:68632639-68632658 | Msa0617930:CDS | 50.0% | |
! | CAGTATCATCCCAGCTTTGG+TGG | + | chr4_2:68632690-68632709 | Msa0617930:CDS | 50.0% |
GCAATGCTTCCACCAAAGCT+GGG | - | chr4_2:68632702-68632721 | None:intergenic | 50.0% | |
TGCAATGCTTCCACCAAAGC+TGG | - | chr4_2:68632703-68632722 | None:intergenic | 50.0% | |
GTTCGGCTCACGAGTTAACT+TGG | + | chr4_2:68633106-68633125 | Msa0617930:intron | 50.0% | |
ACAGTCTACATTAGCCCCAC+TGG | + | chr4_2:68633252-68633271 | Msa0617930:intron | 50.0% | |
! | ACAGATCTCCGGGATGCTTT+TGG | + | chr4_2:68633886-68633905 | Msa0617930:intron | 50.0% |
AGAGGGGGAGCTGATTAAAG+AGG | + | chr4_2:68634021-68634040 | Msa0617930:CDS | 50.0% | |
! | TGGCTGCTACCTTTGTTTGC+TGG | + | chr4_2:68634119-68634138 | Msa0617930:intron | 50.0% |
TTTGCTTGGCTGCTATCAGG+TGG | + | chr4_2:68634171-68634190 | Msa0617930:intron | 50.0% | |
TTGCTTGGCTGCTATCAGGT+GGG | + | chr4_2:68634172-68634191 | Msa0617930:intron | 50.0% | |
CTATCAGGTGGGCGAGATAT+TGG | + | chr4_2:68634183-68634202 | Msa0617930:intron | 50.0% | |
CTGGACGAACATACCCACAT+AGG | - | chr4_2:68634277-68634296 | None:intergenic | 50.0% | |
CTATGTGGGTATGTTCGTCC+AGG | + | chr4_2:68634275-68634294 | Msa0617930:intron | 50.0% | |
TCCAGGTTCAGGGATAGGAA+TGG | - | chr4_2:68634371-68634390 | None:intergenic | 50.0% | |
TTTCTGCAGGCAGCGGTATA+CGG | + | chr4_2:68635366-68635385 | Msa0617930:intron | 50.0% | |
CAAACTCAGCACAAACACCG+AGG | - | chr4_2:68635392-68635411 | None:intergenic | 50.0% | |
!! | CTCGGTGTTTGTGCTGAGTT+TGG | + | chr4_2:68635390-68635409 | Msa0617930:CDS | 50.0% |
CGGTGTTTGTGCTGAGTTTG+GGG | + | chr4_2:68635392-68635411 | Msa0617930:CDS | 50.0% | |
GGTGTTTGTGCTGAGTTTGG+GGG | + | chr4_2:68635393-68635412 | Msa0617930:CDS | 50.0% | |
CTTATGCAGAGGCTCTATCG+AGG | + | chr4_2:68635507-68635526 | Msa0617930:intron | 50.0% | |
GAACTACCTGCAAATGCAGC+AGG | - | chr4_2:68635818-68635837 | None:intergenic | 50.0% | |
GCTGCATTTGCAGGTAGTTC+CGG | + | chr4_2:68635818-68635837 | Msa0617930:intron | 50.0% | |
ATTTGCAGGTAGTTCCGGCA+TGG | + | chr4_2:68635823-68635842 | Msa0617930:intron | 50.0% | |
GTCGGACCTGCAGATATACA+AGG | - | chr4_2:68635984-68636003 | None:intergenic | 50.0% | |
AGAACAAACAGCTGGCCGAA+TGG | + | chr4_2:68636812-68636831 | Msa0617930:CDS | 50.0% | |
TAGCAGGCGGTAATGTTTGC+TGG | - | chr4_2:68636857-68636876 | None:intergenic | 50.0% | |
AGATGACCAGGTGGAAGCAA+GGG | - | chr4_2:68636880-68636899 | None:intergenic | 50.0% | |
AAGATGACCAGGTGGAAGCA+AGG | - | chr4_2:68636881-68636900 | None:intergenic | 50.0% | |
AACTGCCAACCCAGATGCTA+TGG | - | chr4_2:68636986-68637005 | None:intergenic | 50.0% | |
!! | ATAGCATCTGGGTTGGCAGT+TGG | + | chr4_2:68636985-68637004 | Msa0617930:three_prime_UTR | 50.0% |
GTGCGATTGAGTCCAAAAGG+AGG | + | chr4_2:68637189-68637208 | Msa0617930:three_prime_UTR | 50.0% | |
! | TGGGGCAATTCGTGCAGTTT+TGG | + | chr4_2:68637299-68637318 | Msa0617930:three_prime_UTR | 50.0% |
!! | TGGGTGTTGGACGAAAGACG+AGG | - | chr4_2:68627133-68627152 | None:intergenic | 55.0% |
CGCCGATCGAGATAGGTTTC+AGG | + | chr4_2:68627510-68627529 | Msa0617930:CDS | 55.0% | |
! | TGCGATGATGACGACGCTGA+CGG | + | chr4_2:68627543-68627562 | Msa0617930:CDS | 55.0% |
!! | CTGACGGAGGCGTTGAATTC+AGG | + | chr4_2:68627559-68627578 | Msa0617930:CDS | 55.0% |
TGCGGAGGCTGAGTCTTTAG+AGG | + | chr4_2:68627693-68627712 | Msa0617930:CDS | 55.0% | |
AGCGTGCTCCTGGTATGATG+AGG | + | chr4_2:68627770-68627789 | Msa0617930:CDS | 55.0% | |
ATGGCACACTGCGGATACTG+AGG | + | chr4_2:68627867-68627886 | Msa0617930:CDS | 55.0% | |
CACTGCGGATACTGAGGATG+AGG | + | chr4_2:68627873-68627892 | Msa0617930:CDS | 55.0% | |
ACCTGCGTATTTGGCTGCAC+CGG | + | chr4_2:68627999-68628018 | Msa0617930:CDS | 55.0% | |
CAAGCGCAATCAATGCAGCG+TGG | - | chr4_2:68628038-68628057 | None:intergenic | 55.0% | |
GATAGCCGAGGGAAGCTCAA+AGG | + | chr4_2:68628062-68628081 | Msa0617930:CDS | 55.0% | |
TTTCCAGAATCCCCGCGTAC+AGG | + | chr4_2:68628387-68628406 | Msa0617930:CDS | 55.0% | |
AGGAAAGGTCACCTGTACGC+GGG | - | chr4_2:68628401-68628420 | None:intergenic | 55.0% | |
TACGCAGACGACGTCCTTGA+TGG | + | chr4_2:68629233-68629252 | Msa0617930:intron | 55.0% | |
GCTTCCTAGAGCAACCGTCA+AGG | + | chr4_2:68629890-68629909 | Msa0617930:intron | 55.0% | |
AGAGGGAGCCTTGACTGCTT+TGG | + | chr4_2:68630630-68630649 | Msa0617930:CDS | 55.0% | |
GGTTGGAATGGCTGTCGGAA+AGG | + | chr4_2:68630872-68630891 | Msa0617930:CDS | 55.0% | |
AGGGCTGATGCTAAGCAGGT+TGG | + | chr4_2:68630903-68630922 | Msa0617930:intron | 55.0% | |
TGCTATCACCTCCCGATCCT+TGG | + | chr4_2:68631189-68631208 | Msa0617930:intron | 55.0% | |
!! | TATTACAGATGGTGGGGGGG+GGG | - | chr4_2:68631444-68631463 | None:intergenic | 55.0% |
GGCTAGACTCTGCAAGTGTC+TGG | + | chr4_2:68631679-68631698 | Msa0617930:CDS | 55.0% | |
GTGCTGCACTTTGCCTGGAT+TGG | + | chr4_2:68632970-68632989 | Msa0617930:intron | 55.0% | |
GCCATTCCTATCCCTGAACC+TGG | + | chr4_2:68634367-68634386 | Msa0617930:intron | 55.0% | |
GAAGGTCCAGGTTCAGGGAT+AGG | - | chr4_2:68634376-68634395 | None:intergenic | 55.0% | |
GTTGCAGAGCAGTGTCGTGA+AGG | + | chr4_2:68635082-68635101 | Msa0617930:CDS | 55.0% | |
GGGCAGAGTCAATACTGTCC+TGG | - | chr4_2:68635631-68635650 | None:intergenic | 55.0% | |
!! | GGACAGTATTGACTCTGCCC+AGG | + | chr4_2:68635631-68635650 | Msa0617930:CDS | 55.0% |
GGCAGACAGTTCAACCATGC+CGG | - | chr4_2:68635840-68635859 | None:intergenic | 55.0% | |
AGGTCCGACAGCTCTCTCTT+AGG | + | chr4_2:68635995-68636014 | Msa0617930:intron | 55.0% | |
TGGGCCTAAGAGAGAGCTGT+CGG | - | chr4_2:68636002-68636021 | None:intergenic | 55.0% | |
TTGCGGCTGCAAAGATGACC+AGG | - | chr4_2:68636892-68636911 | None:intergenic | 55.0% | |
TCCCAACTCGCGGCGATTCT+CGG | + | chr4_2:68626881-68626900 | Msa0617930:CDS | 60.0% | |
TGGACGAAAGACGAGGCCAG+AGG | - | chr4_2:68627126-68627145 | None:intergenic | 60.0% | |
CTGGTTCCGCCGATCGAGAT+AGG | + | chr4_2:68627503-68627522 | Msa0617930:CDS | 60.0% | |
GTCAGCGTCGTCATCATCGC+AGG | - | chr4_2:68627544-68627563 | None:intergenic | 60.0% | |
! | GATGATGACGACGCTGACGG+AGG | + | chr4_2:68627546-68627565 | Msa0617930:CDS | 60.0% |
TGATCCGGCATGGCACACTG+CGG | + | chr4_2:68627858-68627877 | Msa0617930:CDS | 60.0% | |
GTATCCGCAGTGTGCCATGC+CGG | - | chr4_2:68627865-68627884 | None:intergenic | 60.0% | |
TCCGGTGCAGCCAAATACGC+AGG | - | chr4_2:68628003-68628022 | None:intergenic | 60.0% | |
CGTATTTGGCTGCACCGGAG+TGG | + | chr4_2:68628004-68628023 | Msa0617930:CDS | 60.0% | |
! | GCGTGGCGTTTTTGCCACTC+CGG | - | chr4_2:68628021-68628040 | None:intergenic | 60.0% |
TGCGCTTGCTCAGATAGCCG+AGG | + | chr4_2:68628050-68628069 | Msa0617930:CDS | 60.0% | |
GCGCTTGCTCAGATAGCCGA+GGG | + | chr4_2:68628051-68628070 | Msa0617930:CDS | 60.0% | |
ATGGCTGCCCACCTTACACG+AGG | - | chr4_2:68628271-68628290 | None:intergenic | 60.0% | |
TCACCTGTACGCGGGGATTC+TGG | - | chr4_2:68628393-68628412 | None:intergenic | 60.0% | |
GGAAAGGTCACCTGTACGCG+GGG | - | chr4_2:68628400-68628419 | None:intergenic | 60.0% | |
!! | ATTACAGATGGTGGGGGGGG+GGG | - | chr4_2:68631443-68631462 | None:intergenic | 60.0% |
GTGGAAGCAAGGGTAGCAGG+CGG | - | chr4_2:68636870-68636889 | None:intergenic | 60.0% | |
CAGGTGGAAGCAAGGGTAGC+AGG | - | chr4_2:68636873-68636892 | None:intergenic | 60.0% | |
CTGCTACCCTTGCTTCCACC+TGG | + | chr4_2:68636871-68636890 | Msa0617930:CDS | 60.0% | |
CGGCTGCAAAGATGACCAGG+TGG | - | chr4_2:68636889-68636908 | None:intergenic | 60.0% | |
GCCGAGAATCGCCGCGAGTT+GGG | - | chr4_2:68626885-68626904 | None:intergenic | 65.0% | |
AACTGGCGGGGACTGAGCCA+AGG | + | chr4_2:68627623-68627642 | Msa0617930:CDS | 65.0% | |
! | GAAGCTAGGGAGCGTGCTCC+TGG | + | chr4_2:68627760-68627779 | Msa0617930:CDS | 65.0% |
TCCATGGCAGCAGCTAGGGC+TGG | - | chr4_2:68628364-68628383 | None:intergenic | 65.0% | |
!! | TTACAGATGGTGGGGGGGGG+GGG | - | chr4_2:68631442-68631461 | None:intergenic | 65.0% |
CAGGCAGCGGTATACGGCCT+CGG | + | chr4_2:68635372-68635391 | Msa0617930:intron | 65.0% | |
CGCCGAGAATCGCCGCGAGT+TGG | - | chr4_2:68626886-68626905 | None:intergenic | 70.0% | |
GCCAGCCCTAGCTGCTGCCA+TGG | + | chr4_2:68628360-68628379 | Msa0617930:CDS | 70.0% | |
!! | TACAGATGGTGGGGGGGGGG+GGG | - | chr4_2:68631441-68631460 | None:intergenic | 70.0% |
!! | ACAGATGGTGGGGGGGGGGG+GGG | - | chr4_2:68631440-68631459 | None:intergenic | 75.0% |
!!! | AGATGGTGGGGGGGGGGGGG+GGG | - | chr4_2:68631438-68631457 | None:intergenic | 80.0% |
!!! | CAGATGGTGGGGGGGGGGGG+GGG | - | chr4_2:68631439-68631458 | None:intergenic | 80.0% |
!! | ATGGTGGGGGGGGGGGGGGG+GGG | - | chr4_2:68631436-68631455 | None:intergenic | 85.0% |
!!! | GATGGTGGGGGGGGGGGGGG+GGG | - | chr4_2:68631437-68631456 | None:intergenic | 85.0% |
! | TGGTGGGGGGGGGGGGGGGG+GGG | - | chr4_2:68631435-68631454 | None:intergenic | 90.0% |
! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr4_2:68631434-68631453 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 68626851 | 68637670 | 68626851 | ID=Msa0617930;Name=Msa0617930 |
chr4_2 | mRNA | 68626851 | 68637670 | 68626851 | ID=Msa0617930-mRNA-1;Parent=Msa0617930;Name=Msa0617930-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.79|0.76|1|0.75|0.76|25|723|1074 |
chr4_2 | exon | 68626851 | 68626965 | 68626851 | ID=Msa0617930-mRNA-1:exon:19714;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68627035 | 68627250 | 68627035 | ID=Msa0617930-mRNA-1:exon:19715;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68627263 | 68627477 | 68627263 | ID=Msa0617930-mRNA-1:exon:19716;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68627496 | 68627672 | 68627496 | ID=Msa0617930-mRNA-1:exon:19717;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68627691 | 68627932 | 68627691 | ID=Msa0617930-mRNA-1:exon:19718;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68627945 | 68628083 | 68627945 | ID=Msa0617930-mRNA-1:exon:19719;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68628205 | 68628408 | 68628205 | ID=Msa0617930-mRNA-1:exon:19720;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68630387 | 68630491 | 68630387 | ID=Msa0617930-mRNA-1:exon:19721;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68630610 | 68630675 | 68630610 | ID=Msa0617930-mRNA-1:exon:19722;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68630756 | 68630920 | 68630756 | ID=Msa0617930-mRNA-1:exon:19723;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68631514 | 68631588 | 68631514 | ID=Msa0617930-mRNA-1:exon:19724;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68631674 | 68631828 | 68631674 | ID=Msa0617930-mRNA-1:exon:19725;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68632177 | 68632312 | 68632177 | ID=Msa0617930-mRNA-1:exon:19726;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68632416 | 68632485 | 68632416 | ID=Msa0617930-mRNA-1:exon:19727;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68632599 | 68632726 | 68632599 | ID=Msa0617930-mRNA-1:exon:19728;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68633049 | 68633105 | 68633049 | ID=Msa0617930-mRNA-1:exon:19729;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68633890 | 68634075 | 68633890 | ID=Msa0617930-mRNA-1:exon:19730;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68634190 | 68634282 | 68634190 | ID=Msa0617930-mRNA-1:exon:19731;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635028 | 68635113 | 68635028 | ID=Msa0617930-mRNA-1:exon:19732;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635208 | 68635274 | 68635208 | ID=Msa0617930-mRNA-1:exon:19733;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635375 | 68635441 | 68635375 | ID=Msa0617930-mRNA-1:exon:19734;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635516 | 68635652 | 68635516 | ID=Msa0617930-mRNA-1:exon:19735;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635831 | 68635922 | 68635831 | ID=Msa0617930-mRNA-1:exon:19736;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68635997 | 68636063 | 68635997 | ID=Msa0617930-mRNA-1:exon:19737;Parent=Msa0617930-mRNA-1 |
chr4_2 | exon | 68636783 | 68637670 | 68636783 | ID=Msa0617930-mRNA-1:exon:19738;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68626851 | 68626965 | 68626851 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68627035 | 68627250 | 68627035 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68627263 | 68627477 | 68627263 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68627496 | 68627672 | 68627496 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68627691 | 68627932 | 68627691 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68627945 | 68628083 | 68627945 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68628205 | 68628408 | 68628205 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68630387 | 68630491 | 68630387 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68630610 | 68630675 | 68630610 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68630756 | 68630920 | 68630756 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68631514 | 68631588 | 68631514 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68631674 | 68631828 | 68631674 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68632177 | 68632312 | 68632177 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68632416 | 68632485 | 68632416 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68632599 | 68632726 | 68632599 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68633049 | 68633105 | 68633049 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68633890 | 68634075 | 68633890 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68634190 | 68634282 | 68634190 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635028 | 68635113 | 68635028 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635208 | 68635274 | 68635208 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635375 | 68635441 | 68635375 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635516 | 68635652 | 68635516 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635831 | 68635922 | 68635831 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68635997 | 68636063 | 68635997 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | CDS | 68636783 | 68636947 | 68636783 | ID=Msa0617930-mRNA-1:cds;Parent=Msa0617930-mRNA-1 |
chr4_2 | three_prime_UTR | 68636948 | 68637670 | 68636948 | ID=Msa0617930-mRNA-1:three_prime_utr;Parent=Msa0617930-mRNA-1 |
Gene Sequence |
Protein sequence |