Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718910 | RHN54593.1 | 96.364 | 440 | 14 | 1 | 1 | 438 | 1 | 440 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718910 | sp|Q8RWS4|BYST_ARATH | 53.414 | 498 | 173 | 6 | 1 | 493 | 1 | 444 | 1.49e-166 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718910 | A0A396HQ49 | 96.364 | 440 | 14 | 1 | 1 | 438 | 1 | 440 | 0.0 | 875 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0066740 | Msa0718910 | 0.857455 | 1.613593e-62 | -8.615850e-47 |
| Msa0718910 | Msa1044480 | 0.807076 | 6.029882e-50 | -8.615850e-47 |
| Msa0403500 | Msa0718910 | 0.800340 | 1.509262e-48 | -8.615850e-47 |
| Msa0554290 | Msa0718910 | 0.802810 | 4.701831e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718910 | MtrunA17_Chr5g0408601 | 96.364 | 440 | 14 | 1 | 1 | 438 | 1 | 440 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718910 | AT1G31660.1 | 53.414 | 498 | 173 | 6 | 1 | 493 | 1 | 444 | 1.52e-167 | 480 |
Find 114 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACCTGCTGCTTTCTTTA+AGG | 0.071782 | 5_1:-13306645 | Msa0718910:CDS |
| GTCTCTGATTCTTACTTATT+TGG | 0.106726 | 5_1:-13301477 | Msa0718910:CDS |
| CAATCAACTCGCCTTCTTTC+TGG | 0.148077 | 5_1:+13309150 | None:intergenic |
| ACATCCCCTCAATGCAAAAT+TGG | 0.202176 | 5_1:-13306871 | Msa0718910:CDS |
| TCTAGCTCTCTACTTATTTC+AGG | 0.208501 | 5_1:+13302180 | None:intergenic |
| TTTATACCAAACACTGAAAA+AGG | 0.221473 | 5_1:-13306675 | Msa0718910:CDS |
| TTCTCTACTTCGCTTTAATA+AGG | 0.224124 | 5_1:-13302079 | Msa0718910:intron |
| CCTTCTTTCTGGTGGCGTTT+TGG | 0.227594 | 5_1:+13309161 | None:intergenic |
| TGGAGCTTTGGAGGATTTCT+TGG | 0.233138 | 5_1:+13309181 | None:intergenic |
| TATTGGCATTATTCAATTCT+AGG | 0.241418 | 5_1:-13307283 | Msa0718910:CDS |
| GGAAAATTTAAAGCTTCTTC+TGG | 0.244153 | 5_1:-13302308 | Msa0718910:CDS |
| GGAAAAGCAAAATCATTTCT+TGG | 0.279075 | 5_1:-13302287 | Msa0718910:intron |
| TTTGGAGGATTTCTTGGATT+TGG | 0.308529 | 5_1:+13309187 | None:intergenic |
| AAACCTGCTGCTTTCTTTAA+GGG | 0.310046 | 5_1:-13306644 | Msa0718910:CDS |
| TCCAATTCCATTGGTACATC+TGG | 0.314698 | 5_1:+13301339 | None:intergenic |
| CTAGGACAATGCCTGTTATA+TGG | 0.320912 | 5_1:-13303346 | Msa0718910:CDS |
| GAATCCACCAGTGCCTAAAA+TGG | 0.324933 | 5_1:-13307122 | Msa0718910:CDS |
| GTCTTGTTTATCACAGATAC+TGG | 0.361989 | 5_1:+13301387 | None:intergenic |
| TCCAGATGTACCAATGGAAT+TGG | 0.374340 | 5_1:-13301340 | Msa0718910:CDS |
| CCGTCTGGAATGAAGGGTTC+AGG | 0.376634 | 5_1:+13309221 | None:intergenic |
| GTGGCTTGAAACAAAGCATT+TGG | 0.377398 | 5_1:+13306809 | None:intergenic |
| TAGCGGTGGATGAAGGATTT+CGG | 0.384217 | 5_1:+13309338 | None:intergenic |
| AGTGATTGGTGCCATATAAC+AGG | 0.387926 | 5_1:+13303335 | None:intergenic |
| GATTCTTACTTATTTGGAAC+CGG | 0.389760 | 5_1:-13301471 | Msa0718910:CDS |
| GGGATGTGTTTAAATGCCTT+GGG | 0.397959 | 5_1:+13306887 | None:intergenic |
| CTCAGAGAAGCAGTCATTGT+TGG | 0.399980 | 5_1:-13305528 | Msa0718910:CDS |
| GTTGCACTATTGAAGCTTGC+TGG | 0.400448 | 5_1:-13304846 | Msa0718910:CDS |
| CACACCGCGAAACGAACTTC+TGG | 0.402311 | 5_1:+13309043 | None:intergenic |
| TCAAGTTAACATACCTTGAA+TGG | 0.408307 | 5_1:+13305472 | None:intergenic |
| TGAAGGATTTCGGCTGCGTT+GGG | 0.413590 | 5_1:+13309348 | None:intergenic |
| GGGGATGTGTTTAAATGCCT+TGG | 0.424695 | 5_1:+13306886 | None:intergenic |
| CTATTCCTCCACTCCATTCA+AGG | 0.426326 | 5_1:-13305485 | Msa0718910:intron |
| TTTATATCATCTCTCACTCT+TGG | 0.427328 | 5_1:+13306722 | None:intergenic |
| ATGAAGGATTTCGGCTGCGT+TGG | 0.441206 | 5_1:+13309347 | None:intergenic |
| TTCAGTGCCGTCTGGAATGA+AGG | 0.443676 | 5_1:+13309214 | None:intergenic |
| TCCGGAGGATGAGAGAATAT+TGG | 0.445643 | 5_1:-13307300 | Msa0718910:CDS |
| GCTCCGAATGTTCCCATTGT+TGG | 0.446685 | 5_1:-13309014 | Msa0718910:CDS |
| TTGGCGTATTCAGTGCCGTC+TGG | 0.449606 | 5_1:+13309206 | None:intergenic |
| CTTCTTAGCAGATATACAAT+AGG | 0.450738 | 5_1:-13306917 | Msa0718910:CDS |
| TGGTGTCTGTAAGTGTTATC+TGG | 0.451266 | 5_1:+13307249 | None:intergenic |
| CATCCCCTCAATGCAAAATT+GGG | 0.453102 | 5_1:-13306870 | Msa0718910:CDS |
| TTCGTTTCGCGGTGTGGAAG+AGG | 0.454075 | 5_1:-13309036 | Msa0718910:CDS |
| CTTTCGTATTGCAGGGTTGG+AGG | 0.455905 | 5_1:-13306941 | Msa0718910:intron |
| ATATTATTACCTGTAGCAAC+AGG | 0.456264 | 5_1:+13307206 | None:intergenic |
| ATTATTCAATTCTAGGGACT+CGG | 0.463324 | 5_1:-13307276 | Msa0718910:CDS |
| CAGTCGTAACCGAGGTGAAA+AGG | 0.463805 | 5_1:-13302154 | Msa0718910:CDS |
| ACCATTGTTAAAAGATTAGC+AGG | 0.469557 | 5_1:-13307230 | Msa0718910:CDS |
| ATTGGCATTATTCAATTCTA+GGG | 0.470535 | 5_1:-13307282 | Msa0718910:CDS |
| GCCAATATTCTCTCATCCTC+CGG | 0.471037 | 5_1:+13307299 | None:intergenic |
| CACTTCTTGCATTTGTGCAG+AGG | 0.485206 | 5_1:-13303316 | Msa0718910:intron |
| GTTGGTGAGGATGATGTTGA+TGG | 0.489163 | 5_1:-13308996 | Msa0718910:CDS |
| ATTAAAGCGAAGTAGAGAAA+AGG | 0.490441 | 5_1:+13302083 | None:intergenic |
| TCACCAACAATGGGAACATT+CGG | 0.492591 | 5_1:+13309011 | None:intergenic |
| ATAAATTAGTCCAATTCCAT+TGG | 0.495060 | 5_1:+13301330 | None:intergenic |
| GAAAATCAAAGCCATGTTGA+TGG | 0.495372 | 5_1:-13308945 | Msa0718910:CDS |
| ATTCCCTTAAAGAAAGCAGC+AGG | 0.502170 | 5_1:+13306641 | None:intergenic |
| CCAAAACGCCACCAGAAAGA+AGG | 0.502367 | 5_1:-13309161 | Msa0718910:CDS |
| CGTCTGGAATGAAGGGTTCA+GGG | 0.506596 | 5_1:+13309222 | None:intergenic |
| TAATTTGTAGCGGTGGATGA+AGG | 0.510671 | 5_1:+13309331 | None:intergenic |
| ACATCATCCTCACCAACAAT+GGG | 0.511719 | 5_1:+13309002 | None:intergenic |
| CAGAAGTTCGTTTCGCGGTG+TGG | 0.512343 | 5_1:-13309042 | Msa0718910:CDS |
| AACATCATCCTCACCAACAA+TGG | 0.514016 | 5_1:+13309001 | None:intergenic |
| TTGCACTATTGAAGCTTGCT+GGG | 0.515142 | 5_1:-13304845 | Msa0718910:CDS |
| GAATCTGTTCTTCTGCTTCG+AGG | 0.518541 | 5_1:+13309284 | None:intergenic |
| TTAGCAGGACCTGTTGCTAC+AGG | 0.519390 | 5_1:-13307215 | Msa0718910:intron |
| TCTAACATTCTTAATGTGGC+CGG | 0.520575 | 5_1:+13301452 | None:intergenic |
| TATCAGTTCAAAGATTATCA+AGG | 0.521679 | 5_1:-13309120 | Msa0718910:CDS |
| TGAGATTTGAAAATGATACT+AGG | 0.522794 | 5_1:-13303364 | Msa0718910:CDS |
| ACTATTGAAGCTTGCTGGGA+TGG | 0.524744 | 5_1:-13304841 | Msa0718910:CDS |
| TGAACTGCAGAAGGAAGATA+AGG | 0.526034 | 5_1:-13302329 | Msa0718910:CDS |
| AAGAACAGATTCGTCATCAA+TGG | 0.530427 | 5_1:-13309273 | Msa0718910:exon |
| ACTGCATCAACCACACGATA+CGG | 0.534526 | 5_1:+13303401 | None:intergenic |
| GCACAAATGCAAGAAGTGAT+TGG | 0.534650 | 5_1:+13303321 | None:intergenic |
| GTTACCAGAAGTTCGTTTCG+CGG | 0.535066 | 5_1:-13309047 | Msa0718910:CDS |
| TTTATCACAGATACTGGAGC+GGG | 0.543720 | 5_1:+13301393 | None:intergenic |
| AAAGCGAAGTAGAGAAAAGG+AGG | 0.545160 | 5_1:+13302086 | None:intergenic |
| ATCAATGGCGAAGAAGAGAA+AGG | 0.561958 | 5_1:-13309258 | Msa0718910:exon |
| ATCTTACTGAACCTGAAAAG+TGG | 0.562405 | 5_1:-13306835 | Msa0718910:CDS |
| TTATTCAATTCTAGGGACTC+GGG | 0.566076 | 5_1:-13307275 | Msa0718910:CDS |
| TGATTATGTACCTCACATAG+TGG | 0.567184 | 5_1:+13306611 | None:intergenic |
| TCAACTCGCCTTCTTTCTGG+TGG | 0.567972 | 5_1:+13309153 | None:intergenic |
| CTCAATGCAAAATTGGGAGG+AGG | 0.572422 | 5_1:-13306864 | Msa0718910:CDS |
| TTTCACCTCGGTTACGACTG+TGG | 0.577449 | 5_1:+13302157 | None:intergenic |
| ATGCTTTGTTTCAAGCCACT+AGG | 0.580166 | 5_1:-13306805 | Msa0718910:CDS |
| TGAAATTCAGGATATTACTC+CGG | 0.594239 | 5_1:-13307318 | Msa0718910:intron |
| TCAACTCAGAGAGGTTGAAG+AGG | 0.595200 | 5_1:-13309087 | Msa0718910:CDS |
| TGGATTATTGTGGCACAACA+AGG | 0.596993 | 5_1:-13304821 | Msa0718910:intron |
| AGGTCGATAATTTGTAGCGG+TGG | 0.602493 | 5_1:+13309324 | None:intergenic |
| TCTGTTCTTCTGCTTCGAGG+TGG | 0.611177 | 5_1:+13309287 | None:intergenic |
| TCAGTGCCGTCTGGAATGAA+GGG | 0.614244 | 5_1:+13309215 | None:intergenic |
| AATATTGTTTCCACTATGTG+AGG | 0.615813 | 5_1:-13306621 | Msa0718910:intron |
| AAAATACTTGACATATACAA+GGG | 0.619470 | 5_1:-13307094 | Msa0718910:CDS |
| ATAAAGCAAAATGCAGCCGT+TGG | 0.620040 | 5_1:+13306693 | None:intergenic |
| CAGGAACTTCACCATCAACA+TGG | 0.623265 | 5_1:+13308934 | None:intergenic |
| TTAACATACCTTGAATGGAG+TGG | 0.627262 | 5_1:+13305477 | None:intergenic |
| CGACATTCCAGATGTACCAA+TGG | 0.627346 | 5_1:-13301346 | Msa0718910:CDS |
| TACAATAGGCAAAATCCCCA+AGG | 0.632126 | 5_1:-13306903 | Msa0718910:CDS |
| CCCCTCAATGCAAAATTGGG+AGG | 0.632144 | 5_1:-13306867 | Msa0718910:CDS |
| GAATGTTCCCATTGTTGGTG+AGG | 0.634440 | 5_1:-13309009 | Msa0718910:CDS |
| GAGCGGGTAATGAATAGTCA+AGG | 0.637316 | 5_1:+13301409 | None:intergenic |
| GGATGTGTTTAAATGCCTTG+GGG | 0.640141 | 5_1:+13306888 | None:intergenic |
| ACATACCTTGAATGGAGTGG+AGG | 0.640405 | 5_1:+13305480 | None:intergenic |
| AATTCAGGATATTACTCCGG+AGG | 0.641238 | 5_1:-13307315 | Msa0718910:intron |
| CTTGCTGGGATGGATTATTG+TGG | 0.644659 | 5_1:-13304831 | Msa0718910:CDS |
| CCTGAACCCTTCATTCCAGA+CGG | 0.647833 | 5_1:-13309221 | Msa0718910:CDS |
| TTCAATTCTAGGGACTCGGG+TGG | 0.664674 | 5_1:-13307272 | Msa0718910:CDS |
| AAATACTTGACATATACAAG+GGG | 0.670626 | 5_1:-13307093 | Msa0718910:intron |
| AAGCGAAGTAGAGAAAAGGA+GGG | 0.670785 | 5_1:+13302087 | None:intergenic |
| AGCTAAGCTTCAACTCAGAG+AGG | 0.674875 | 5_1:-13309096 | Msa0718910:CDS |
| ATATGCTTTGCCGTATCGTG+TGG | 0.675148 | 5_1:-13303411 | Msa0718910:CDS |
| TTTAGGTCGATAATTTGTAG+CGG | 0.676911 | 5_1:+13309321 | None:intergenic |
| GTTTATCACAGATACTGGAG+CGG | 0.690999 | 5_1:+13301392 | None:intergenic |
| TCGTAACCGAGGTGAAAAGG+AGG | 0.711585 | 5_1:-13302151 | Msa0718910:CDS |
| CTAGACCACAGTCGTAACCG+AGG | 0.711855 | 5_1:-13302162 | Msa0718910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATATATATATATAT+AGG | - | chr5_1:13306454-13306473 | Msa0718910:intron | 0.0% |
| !! | AAAATATATATATATATATA+GGG | - | chr5_1:13306455-13306474 | Msa0718910:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr5_1:13306664-13306683 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr5_1:13306665-13306684 | None:intergenic | 0.0% |
| !! | AAAAAAATAATAAGAATCAA+AGG | + | chr5_1:13301791-13301810 | None:intergenic | 10.0% |
| !!! | TTTGATTCTTATTATTTTTT+TGG | - | chr5_1:13301790-13301809 | Msa0718910:intron | 10.0% |
| !! | ATATTTAGATATAGAAATTA+TGG | + | chr5_1:13302480-13302499 | None:intergenic | 10.0% |
| !!! | ATTTAAAAAAAATGATTTTC+TGG | + | chr5_1:13302908-13302927 | None:intergenic | 10.0% |
| !! | TTAAATTTAGTCATAATTAT+CGG | - | chr5_1:13304373-13304392 | Msa0718910:intron | 10.0% |
| !! | AAATGAATAAGATAATTTAT+AGG | + | chr5_1:13305088-13305107 | None:intergenic | 10.0% |
| !!! | TTTAAAAAATGATATTTTGA+AGG | - | chr5_1:13306754-13306773 | Msa0718910:CDS | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_1:13306859-13306878 | Msa0718910:CDS | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_1:13306860-13306879 | Msa0718910:CDS | 10.0% |
| !! | TTCAAATTGAAAAAATAAAA+AGG | + | chr5_1:13309037-13309056 | None:intergenic | 10.0% |
| !!! | ATAAGTTTTGTGATATTTTT+TGG | - | chr5_1:13302264-13302283 | Msa0718910:intron | 15.0% |
| !!! | TAAGTTTTGTGATATTTTTT+GGG | - | chr5_1:13302265-13302284 | Msa0718910:intron | 15.0% |
| !! | ATTTCTATATCTAAATATTC+AGG | - | chr5_1:13302482-13302501 | Msa0718910:intron | 15.0% |
| !!! | TTCATTTTCATATAATCTAT+AGG | - | chr5_1:13302585-13302604 | Msa0718910:intron | 15.0% |
| !! | ATCTTAAAAATGTATTACAA+TGG | + | chr5_1:13304214-13304233 | None:intergenic | 15.0% |
| !! | ACGTTAATAAATTTGTATTT+GGG | - | chr5_1:13304292-13304311 | Msa0718910:intron | 15.0% |
| !! | TAAATTTAGTCATAATTATC+GGG | - | chr5_1:13304374-13304393 | Msa0718910:intron | 15.0% |
| !! | AATTAAATATAAATCCTGTT+TGG | - | chr5_1:13304430-13304449 | Msa0718910:intron | 15.0% |
| !! | TAACTTGAATTATTACAAAT+CGG | - | chr5_1:13305243-13305262 | Msa0718910:intron | 15.0% |
| !!! | ATGTATTTTCTTTTTATTAG+AGG | + | chr5_1:13305538-13305557 | None:intergenic | 15.0% |
| !! | TACAAAATAGAATATTGAAT+GGG | - | chr5_1:13305924-13305943 | Msa0718910:intron | 15.0% |
| !! | ATTCTAAATTATACCATAAT+TGG | - | chr5_1:13306301-13306320 | Msa0718910:intron | 15.0% |
| !! | TTCTAAATTATACCATAATT+GGG | - | chr5_1:13306302-13306321 | Msa0718910:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_1:13306861-13306880 | Msa0718910:CDS | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | chr5_1:13306924-13306943 | Msa0718910:CDS | 15.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | chr5_1:13306925-13306944 | Msa0718910:CDS | 15.0% |
| !!! | ATGTTTTAATGAATTAGAAA+AGG | - | chr5_1:13307518-13307537 | Msa0718910:intron | 15.0% |
| !! | TAAATTTGGATAAAAAGAAT+CGG | - | chr5_1:13307555-13307574 | Msa0718910:intron | 15.0% |
| !!! | TCTTTATTTTAAAGGATTTT+TGG | + | chr5_1:13307698-13307717 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAATCTACAG+AGG | + | chr5_1:13308865-13308884 | None:intergenic | 15.0% |
| !!! | TATATTTTAAAAGTGATGTT+TGG | + | chr5_1:13309184-13309203 | None:intergenic | 15.0% |
| !! | GAGAAGATTTATTAATTAGT+TGG | - | chr5_1:13302022-13302041 | Msa0718910:intron | 20.0% |
| !! | GCTATAGAAATAACTTATAT+AGG | - | chr5_1:13302384-13302403 | Msa0718910:intron | 20.0% |
| !! | TATTTATCATTCTTACATGT+TGG | - | chr5_1:13303223-13303242 | Msa0718910:intron | 20.0% |
| !!! | AGTATTTTTTCATCCATTTT+AGG | + | chr5_1:13303579-13303598 | None:intergenic | 20.0% |
| !! | AAAAATACTTGACATATACA+AGG | - | chr5_1:13303590-13303609 | Msa0718910:intron | 20.0% |
| !! | AAAATACTTGACATATACAA+GGG | - | chr5_1:13303591-13303610 | Msa0718910:intron | 20.0% |
| !! | ATGATATAAAAAAGAACCAA+CGG | - | chr5_1:13303976-13303995 | Msa0718910:intron | 20.0% |
| !! | AACAGAACCTAATAAAATAT+TGG | + | chr5_1:13304144-13304163 | None:intergenic | 20.0% |
| !! | AATAAATATCTTTCTGATGT+TGG | - | chr5_1:13304246-13304265 | Msa0718910:intron | 20.0% |
| !! | GACGTTAATAAATTTGTATT+TGG | - | chr5_1:13304291-13304310 | Msa0718910:intron | 20.0% |
| !! | ATTATGACTAAATTTAACAC+AGG | + | chr5_1:13304370-13304389 | None:intergenic | 20.0% |
| !! | ATTACAATTTACATTACGTA+AGG | - | chr5_1:13304840-13304859 | Msa0718910:CDS | 20.0% |
| !! | TTACAATTTACATTACGTAA+GGG | - | chr5_1:13304841-13304860 | Msa0718910:CDS | 20.0% |
| !! | TTGCATTTATTATTGTAGAA+TGG | - | chr5_1:13305363-13305382 | Msa0718910:intron | 20.0% |
| !! | TATTATTGTAGAATGGAATT+AGG | - | chr5_1:13305370-13305389 | Msa0718910:intron | 20.0% |
| !! | ATTATTGTAGAATGGAATTA+GGG | - | chr5_1:13305371-13305390 | Msa0718910:intron | 20.0% |
| !!! | AGGATATAAACAATTTTACT+GGG | + | chr5_1:13305456-13305475 | None:intergenic | 20.0% |
| !!! | AAGGATATAAACAATTTTAC+TGG | + | chr5_1:13305457-13305476 | None:intergenic | 20.0% |
| !! | ATCAACATTTACAATGAAAA+AGG | + | chr5_1:13305476-13305495 | None:intergenic | 20.0% |
| !! | AGATTGTATTATCAAACAAA+AGG | + | chr5_1:13305905-13305924 | None:intergenic | 20.0% |
| !! | CTACAAAATAGAATATTGAA+TGG | - | chr5_1:13305923-13305942 | Msa0718910:intron | 20.0% |
| !! | ACAAAATAGAATATTGAATG+GGG | - | chr5_1:13305925-13305944 | Msa0718910:intron | 20.0% |
| !! | TGATATCATAAAACAAGAAT+TGG | + | chr5_1:13306084-13306103 | None:intergenic | 20.0% |
| !! | TTAGTGAATAAATTCAAACA+GGG | + | chr5_1:13306180-13306199 | None:intergenic | 20.0% |
| !! | TTTAGTGAATAAATTCAAAC+AGG | + | chr5_1:13306181-13306200 | None:intergenic | 20.0% |
| !! | AAAGTGAATAAATTCAAACA+GGG | + | chr5_1:13306230-13306249 | None:intergenic | 20.0% |
| !! | TAAAGTGAATAAATTCAAAC+AGG | + | chr5_1:13306231-13306250 | None:intergenic | 20.0% |
| !!! | TAGAATTGTGTTTACTTTTA+GGG | + | chr5_1:13306287-13306306 | None:intergenic | 20.0% |
| !!! | TTAGAATTGTGTTTACTTTT+AGG | + | chr5_1:13306288-13306307 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr5_1:13306884-13306903 | Msa0718910:CDS | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr5_1:13306957-13306976 | Msa0718910:intron | 20.0% |
| !!! | GACACTTTTTTTTAGTAAAT+GGG | - | chr5_1:13306994-13307013 | Msa0718910:intron | 20.0% |
| !!! | GTAGTTTATTGAATATTTTG+AGG | - | chr5_1:13307043-13307062 | Msa0718910:intron | 20.0% |
| !!! | CTATTTCATAAAGCTTTTTT+TGG | - | chr5_1:13307244-13307263 | Msa0718910:CDS | 20.0% |
| !! | ATTGGATATCCAATAAAAAA+CGG | + | chr5_1:13307433-13307452 | None:intergenic | 20.0% |
| !!! | AATCCTTTAAAATAAAGATG+TGG | - | chr5_1:13307700-13307719 | Msa0718910:intron | 20.0% |
| !! | TATTTAAAAAAACACCAGAA+TGG | - | chr5_1:13307740-13307759 | Msa0718910:intron | 20.0% |
| !! | ATCAAGAGAAAAAAAAATCT+GGG | + | chr5_1:13307959-13307978 | None:intergenic | 20.0% |
| !! | AATCAAGAGAAAAAAAAATC+TGG | + | chr5_1:13307960-13307979 | None:intergenic | 20.0% |
| !! | TAAGAAGCTTAAATTTATCT+CGG | + | chr5_1:13308707-13308726 | None:intergenic | 20.0% |
| !! | AAATTTAAGCTTCTTAATGT+TGG | - | chr5_1:13308711-13308730 | Msa0718910:intron | 20.0% |
| !! | AATTTAAGCTTCTTAATGTT+GGG | - | chr5_1:13308712-13308731 | Msa0718910:intron | 20.0% |
| !!! | ATTTTCTAACATTCTTAATG+TGG | + | chr5_1:13309240-13309259 | None:intergenic | 20.0% |
| ! | TATCAGTTCAAAGATTATCA+AGG | - | chr5_1:13301565-13301584 | Msa0718910:intron | 25.0% |
| !!! | GTGATATTGATGATTTTAGT+GGG | - | chr5_1:13301711-13301730 | Msa0718910:intron | 25.0% |
| ! | AAAGGAAAAAAATAACTCAC+AGG | + | chr5_1:13301773-13301792 | None:intergenic | 25.0% |
| ! | GTTATGATTGTATGAAAGTT+TGG | - | chr5_1:13301823-13301842 | Msa0718910:intron | 25.0% |
| ! | AATTAGATTGAGAAAGTCAT+TGG | - | chr5_1:13301865-13301884 | Msa0718910:intron | 25.0% |
| ! | AGTGCATATGTATAAACTAT+AGG | - | chr5_1:13302145-13302164 | Msa0718910:CDS | 25.0% |
| ! | GTGCATATGTATAAACTATA+GGG | - | chr5_1:13302146-13302165 | Msa0718910:CDS | 25.0% |
| ! | AAGTGCATATGTATAAACTA+TGG | - | chr5_1:13302144-13302163 | Msa0718910:CDS | 25.0% |
| ! | AGTGCATATGTATAAACTAT+GGG | - | chr5_1:13302145-13302164 | Msa0718910:CDS | 25.0% |
| !! | GTTGTTTACATACACTATTT+TGG | + | chr5_1:13302322-13302341 | None:intergenic | 25.0% |
| ! | ACAAAAAAAAAATGCCAAAC+GGG | + | chr5_1:13302756-13302775 | None:intergenic | 25.0% |
| ! | CACAAAAAAAAAATGCCAAA+CGG | + | chr5_1:13302757-13302776 | None:intergenic | 25.0% |
| ! | AATGAATTGAAAGCAACTTA+TGG | - | chr5_1:13303089-13303108 | Msa0718910:intron | 25.0% |
| ! | GAATGATAAATAATGCACTT+AGG | + | chr5_1:13303215-13303234 | None:intergenic | 25.0% |
| !!! | GTTTTGATTACTTGAAATTC+AGG | - | chr5_1:13303355-13303374 | Msa0718910:CDS | 25.0% |
| ! | TATTGGCATTATTCAATTCT+AGG | - | chr5_1:13303402-13303421 | Msa0718910:CDS | 25.0% |
| ! | ATTGGCATTATTCAATTCTA+GGG | - | chr5_1:13303403-13303422 | Msa0718910:CDS | 25.0% |
| ! | TATAAAACTGCACTTTGATT+TGG | - | chr5_1:13303499-13303518 | Msa0718910:intron | 25.0% |
| !! | ATAAAACTGCACTTTGATTT+GGG | - | chr5_1:13303500-13303519 | Msa0718910:intron | 25.0% |
| ! | AAATACTTGACATATACAAG+GGG | - | chr5_1:13303592-13303611 | Msa0718910:intron | 25.0% |
| ! | TAACAAGCTAAGTATCTAAA+TGG | + | chr5_1:13303685-13303704 | None:intergenic | 25.0% |
| !!! | ATACTTAGCTTGTTAATATG+AGG | - | chr5_1:13303690-13303709 | Msa0718910:intron | 25.0% |
| !! | AGGATTTTTGCTTCTAATTT+CGG | - | chr5_1:13303900-13303919 | Msa0718910:intron | 25.0% |
| ! | TTTATACCAAACACTGAAAA+AGG | - | chr5_1:13304010-13304029 | Msa0718910:intron | 25.0% |
| !!! | TGATTGGCCAATATTTTATT+AGG | - | chr5_1:13304134-13304153 | Msa0718910:intron | 25.0% |
| ! | CAGTTTATGCAATATTAAGT+GGG | - | chr5_1:13304269-13304288 | Msa0718910:intron | 25.0% |
| ! | ATATAAATCCTGTTTGGAAA+AGG | - | chr5_1:13304436-13304455 | Msa0718910:intron | 25.0% |
| !! | GAACTTGAAAAAAGTCATTT+TGG | - | chr5_1:13304488-13304507 | Msa0718910:intron | 25.0% |
| !!! | AATATTCTCTCACTTTGTTT+TGG | - | chr5_1:13304606-13304625 | Msa0718910:intron | 25.0% |
| ! | ACCATGTCAATGAATAATTA+CGG | + | chr5_1:13304931-13304950 | None:intergenic | 25.0% |
| !! | CCAAAAAAGGAAGATTTTAT+GGG | + | chr5_1:13304992-13305011 | None:intergenic | 25.0% |
| !! | TCCAAAAAAGGAAGATTTTA+TGG | + | chr5_1:13304993-13305012 | None:intergenic | 25.0% |
| ! | TTGTTTAACAAGTCCAAAAA+AGG | + | chr5_1:13305005-13305024 | None:intergenic | 25.0% |
| ! | ATTATTACAAATCGGATACA+AGG | - | chr5_1:13305251-13305270 | Msa0718910:intron | 25.0% |
| ! | CTATGTTAGTACTTGATATA+CGG | + | chr5_1:13305637-13305656 | None:intergenic | 25.0% |
| ! | AATTTCAATAACCACATGAA+AGG | + | chr5_1:13305745-13305764 | None:intergenic | 25.0% |
| !! | TATCAGCAATTGATAATCAT+AGG | - | chr5_1:13306099-13306118 | Msa0718910:intron | 25.0% |
| ! | AATCATAGGATTAATAAGTG+TGG | - | chr5_1:13306113-13306132 | Msa0718910:intron | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | - | chr5_1:13306883-13306902 | Msa0718910:CDS | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | - | chr5_1:13306993-13307012 | Msa0718910:intron | 25.0% |
| !!! | GGCATAAATTTTAACAATCT+TGG | - | chr5_1:13307064-13307083 | Msa0718910:intron | 25.0% |
| ! | TGAGATTTGAAAATGATACT+AGG | - | chr5_1:13307321-13307340 | Msa0718910:intron | 25.0% |
| ! | GCACAAAAAATTACAGAAAA+TGG | + | chr5_1:13307406-13307425 | None:intergenic | 25.0% |
| ! | GTTATCAATCATCATTGTAT+TGG | + | chr5_1:13307451-13307470 | None:intergenic | 25.0% |
| ! | AACAATGATGATTGATAAAC+AGG | - | chr5_1:13307468-13307487 | Msa0718910:intron | 25.0% |
| !!! | ATGCCACATCTTTATTTTAA+AGG | + | chr5_1:13307706-13307725 | None:intergenic | 25.0% |
| ! | AGGTATTATTGTAAGAAGTT+AGG | - | chr5_1:13307883-13307902 | Msa0718910:intron | 25.0% |
| ! | TCAAGAGAAAAAAAAATCTG+GGG | + | chr5_1:13307958-13307977 | None:intergenic | 25.0% |
| !!! | TTGATTGTTTCTGTAATCAA+AGG | - | chr5_1:13307974-13307993 | Msa0718910:intron | 25.0% |
| !!! | TGATTGTTTCTGTAATCAAA+GGG | - | chr5_1:13307975-13307994 | Msa0718910:intron | 25.0% |
| ! | ATGAACGTGTAAGAAAATAA+GGG | + | chr5_1:13308177-13308196 | None:intergenic | 25.0% |
| !! | TTTTTCTCATTTTGCATTTC+TGG | - | chr5_1:13308446-13308465 | Msa0718910:intron | 25.0% |
| ! | GATATTAATTATCTTACTGC+AGG | - | chr5_1:13308477-13308496 | Msa0718910:intron | 25.0% |
| ! | AGGGCAAAAAATTAAAGAAA+AGG | + | chr5_1:13308582-13308601 | None:intergenic | 25.0% |
| !! | ATTTTGCAACAATAAAACTC+AGG | - | chr5_1:13308830-13308849 | Msa0718910:intron | 25.0% |
| ! | AGAAAATCCTTCAATCAAAT+TGG | + | chr5_1:13309152-13309171 | None:intergenic | 25.0% |
| ! | TTTAAAAGTGATGTTTGGTT+TGG | + | chr5_1:13309179-13309198 | None:intergenic | 25.0% |
| ! | TTTAGGTCGATAATTTGTAG+CGG | + | chr5_1:13301367-13301386 | None:intergenic | 30.0% |
| !! | GGTGATATTGATGATTTTAG+TGG | - | chr5_1:13301710-13301729 | Msa0718910:intron | 30.0% |
| ATAAGTGCATATGTATCAGA+TGG | - | chr5_1:13301934-13301953 | Msa0718910:intron | 30.0% | |
| ! | GTTTCTTCGATAGTTTTTCT+AGG | + | chr5_1:13301997-13302016 | None:intergenic | 30.0% |
| TATTAATTAGTTGGACGAGT+TGG | - | chr5_1:13302031-13302050 | Msa0718910:intron | 30.0% | |
| GTGTAATTTGATCCATGTAA+CGG | - | chr5_1:13302089-13302108 | Msa0718910:CDS | 30.0% | |
| TGTAATTTGATCCATGTAAC+GGG | - | chr5_1:13302090-13302109 | Msa0718910:CDS | 30.0% | |
| TATAAACTATAGGGACTGTT+TGG | - | chr5_1:13302155-13302174 | Msa0718910:CDS | 30.0% | |
| ! | GCTTATTTGAGTTTATCTAC+TGG | - | chr5_1:13302240-13302259 | Msa0718910:intron | 30.0% |
| ATTTGCAACTTTAGCAAAAG+TGG | + | chr5_1:13302436-13302455 | None:intergenic | 30.0% | |
| ATAAGCTCTTTATCCAAACA+TGG | - | chr5_1:13302454-13302473 | Msa0718910:intron | 30.0% | |
| ATAGAAATTATGGCCATGTT+TGG | + | chr5_1:13302470-13302489 | None:intergenic | 30.0% | |
| AAACTATCTTGGAGAAATCA+TGG | - | chr5_1:13302618-13302637 | Msa0718910:intron | 30.0% | |
| !!! | CGTTTGGCATTTTTTTTTTG+TGG | - | chr5_1:13302755-13302774 | Msa0718910:intron | 30.0% |
| TGACTTCACTTGTTTCATAT+AGG | - | chr5_1:13303021-13303040 | Msa0718910:intron | 30.0% | |
| !! | GGCTATAACTTATTTTCACA+AGG | - | chr5_1:13303042-13303061 | Msa0718910:intron | 30.0% |
| AAATAATGCACTTAGGAGTT+AGG | + | chr5_1:13303208-13303227 | None:intergenic | 30.0% | |
| GTCACTACTGTAAACAAAAA+GGG | + | chr5_1:13303323-13303342 | None:intergenic | 30.0% | |
| AGTCACTACTGTAAACAAAA+AGG | + | chr5_1:13303324-13303343 | None:intergenic | 30.0% | |
| TTTGTTTACAGTAGTGACTT+TGG | - | chr5_1:13303325-13303344 | Msa0718910:CDS | 30.0% | |
| TGAAATTCAGGATATTACTC+CGG | - | chr5_1:13303367-13303386 | Msa0718910:CDS | 30.0% | |
| ! | ATTATTCAATTCTAGGGACT+CGG | - | chr5_1:13303409-13303428 | Msa0718910:CDS | 30.0% |
| ACCATTGTTAAAAGATTAGC+AGG | - | chr5_1:13303455-13303474 | Msa0718910:intron | 30.0% | |
| ! | TCCTGCTAATCTTTTAACAA+TGG | + | chr5_1:13303459-13303478 | None:intergenic | 30.0% |
| ATATTATTACCTGTAGCAAC+AGG | + | chr5_1:13303482-13303501 | None:intergenic | 30.0% | |
| AAGCTAAGTATCTAAATGGA+AGG | + | chr5_1:13303681-13303700 | None:intergenic | 30.0% | |
| CTTCTTAGCAGATATACAAT+AGG | - | chr5_1:13303768-13303787 | Msa0718910:intron | 30.0% | |
| ATTAGAAGCAAAAATCCTAG+TGG | + | chr5_1:13303898-13303917 | None:intergenic | 30.0% | |
| ! | TTCTAATTTCGGTGCAAAAA+AGG | - | chr5_1:13303911-13303930 | Msa0718910:intron | 30.0% |
| TTTATATCATCTCTCACTCT+TGG | + | chr5_1:13303966-13303985 | None:intergenic | 30.0% | |
| AATATTGTTTCCACTATGTG+AGG | - | chr5_1:13304064-13304083 | Msa0718910:intron | 30.0% | |
| TGAGGTACATAATCATATCT+AGG | - | chr5_1:13304082-13304101 | Msa0718910:intron | 30.0% | |
| TTATGTTCCTAACTGATGAT+TGG | - | chr5_1:13304118-13304137 | Msa0718910:intron | 30.0% | |
| GAGTCTTTATCATCAATTGA+TGG | + | chr5_1:13304184-13304203 | None:intergenic | 30.0% | |
| GCAGTTTATGCAATATTAAG+TGG | - | chr5_1:13304268-13304287 | Msa0718910:intron | 30.0% | |
| ! | AAATTTGTATTTGGGTGTTG+AGG | - | chr5_1:13304300-13304319 | Msa0718910:intron | 30.0% |
| CATAATTATCGGGAAAAAGA+TGG | - | chr5_1:13304384-13304403 | Msa0718910:intron | 30.0% | |
| TTGTAAAAGCAACTAGATGA+AGG | + | chr5_1:13304635-13304654 | None:intergenic | 30.0% | |
| ! | CTTTTACAATGACATGCATT+TGG | - | chr5_1:13304646-13304665 | Msa0718910:intron | 30.0% |
| GTCATTCTACATTACATATG+AGG | + | chr5_1:13304710-13304729 | None:intergenic | 30.0% | |
| CAATGAATAATTACGGTGTT+TGG | + | chr5_1:13304924-13304943 | None:intergenic | 30.0% | |
| ACCGTAATTATTCATTGACA+TGG | - | chr5_1:13304927-13304946 | Msa0718910:intron | 30.0% | |
| !!! | CCCATAAAATCTTCCTTTTT+TGG | - | chr5_1:13304989-13305008 | Msa0718910:intron | 30.0% |
| ACCACTTATGGTATATGTAA+AGG | + | chr5_1:13305055-13305074 | None:intergenic | 30.0% | |
| ! | ATCTTATTCATTTTCCTCTC+TGG | - | chr5_1:13305095-13305114 | Msa0718910:intron | 30.0% |
| TCAAGTTAACATACCTTGAA+TGG | + | chr5_1:13305216-13305235 | None:intergenic | 30.0% | |
| ! | AAATGTTGATTGTGCAATCT+TGG | - | chr5_1:13305486-13305505 | Msa0718910:CDS | 30.0% |
| GTGCTATGAGAAAAAAAATC+TGG | + | chr5_1:13305516-13305535 | None:intergenic | 30.0% | |
| ! | CTCTGTTTTCTTGAACTATT+TGG | - | chr5_1:13305589-13305608 | Msa0718910:intron | 30.0% |
| AGAAGCAAGACAAAATTTCA+TGG | - | chr5_1:13305655-13305674 | Msa0718910:intron | 30.0% | |
| GTATGAACATCAAGAAGTTA+GGG | + | chr5_1:13305816-13305835 | None:intergenic | 30.0% | |
| TGTATGAACATCAAGAAGTT+AGG | + | chr5_1:13305817-13305836 | None:intergenic | 30.0% | |
| GATAGACAGATAGATAAGTA+TGG | - | chr5_1:13306058-13306077 | Msa0718910:intron | 30.0% | |
| ! | TGTACCTTTTGTAAGTGTAT+GGG | + | chr5_1:13306256-13306275 | None:intergenic | 30.0% |
| ! | ATGTACCTTTTGTAAGTGTA+TGG | + | chr5_1:13306257-13306276 | None:intergenic | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr5_1:13306545-13306564 | Msa0718910:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr5_1:13306551-13306570 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_1:13306868-13306887 | Msa0718910:CDS | 30.0% | |
| ! | TTGAAATGGCTCAGTTATTT+TGG | - | chr5_1:13306971-13306990 | Msa0718910:intron | 30.0% |
| !! | TGAAATGGCTCAGTTATTTT+GGG | - | chr5_1:13306972-13306991 | Msa0718910:intron | 30.0% |
| TTCGTTATATGTGTTGTAGT+GGG | + | chr5_1:13307110-13307129 | None:intergenic | 30.0% | |
| ATTCGTTATATGTGTTGTAG+TGG | + | chr5_1:13307111-13307130 | None:intergenic | 30.0% | |
| ATAGCATACTATTCTAGTAG+TGG | - | chr5_1:13307586-13307605 | Msa0718910:intron | 30.0% | |
| TGATAAGTGACATCAAAAGT+GGG | + | chr5_1:13307790-13307809 | None:intergenic | 30.0% | |
| CTTCTTACAATAATACCTCT+AGG | + | chr5_1:13307881-13307900 | None:intergenic | 30.0% | |
| !! | GATTGTTTCTGTAATCAAAG+GGG | - | chr5_1:13307976-13307995 | Msa0718910:intron | 30.0% |
| !! | ATTGTTTCTGTAATCAAAGG+GGG | - | chr5_1:13307977-13307996 | Msa0718910:intron | 30.0% |
| TACAATACACCAAAAATGGT+GGG | - | chr5_1:13308099-13308118 | Msa0718910:intron | 30.0% | |
| TGAACGTGTAAGAAAATAAG+GGG | + | chr5_1:13308176-13308195 | None:intergenic | 30.0% | |
| GATGAACGTGTAAGAAAATA+AGG | + | chr5_1:13308178-13308197 | None:intergenic | 30.0% | |
| ! | AGCTATGATTCATGTTCTTT+TGG | - | chr5_1:13308281-13308300 | Msa0718910:intron | 30.0% |
| ! | ATTTTTGTACCTGAAACAGA+AGG | + | chr5_1:13308337-13308356 | None:intergenic | 30.0% |
| ! | GGAAAATTTAAAGCTTCTTC+TGG | - | chr5_1:13308377-13308396 | Msa0718910:intron | 30.0% |
| GGAAAAGCAAAATCATTTCT+TGG | - | chr5_1:13308398-13308417 | Msa0718910:intron | 30.0% | |
| ATTAAAGCGAAGTAGAGAAA+AGG | + | chr5_1:13308605-13308624 | None:intergenic | 30.0% | |
| TTCTCTACTTCGCTTTAATA+AGG | - | chr5_1:13308606-13308625 | Msa0718910:intron | 30.0% | |
| AAGGTTAGATATGTACTGTA+TGG | - | chr5_1:13308625-13308644 | Msa0718910:intron | 30.0% | |
| ATATCAACTACTGTAGTATC+TGG | + | chr5_1:13308969-13308988 | None:intergenic | 30.0% | |
| TGGTTATCCAATTTGATTGA+AGG | - | chr5_1:13309142-13309161 | Msa0718910:CDS | 30.0% | |
| GTCTCTGATTCTTACTTATT+TGG | - | chr5_1:13309208-13309227 | Msa0718910:CDS | 30.0% | |
| ! | GATTCTTACTTATTTGGAAC+CGG | - | chr5_1:13309214-13309233 | Msa0718910:CDS | 30.0% |
| AAGAACAGATTCGTCATCAA+TGG | - | chr5_1:13301412-13301431 | Msa0718910:CDS | 35.0% | |
| TTTGGAGGATTTCTTGGATT+TGG | + | chr5_1:13301501-13301520 | None:intergenic | 35.0% | |
| GAAAATCAAAGCCATGTTGA+TGG | - | chr5_1:13301740-13301759 | Msa0718910:intron | 35.0% | |
| !!! | TTGGTTTTTTAGCTTCTACG+AGG | - | chr5_1:13301842-13301861 | Msa0718910:intron | 35.0% |
| ATCACTAGAAAAACCATCAG+AGG | - | chr5_1:13301967-13301986 | Msa0718910:intron | 35.0% | |
| GTAATTTGATCCATGTAACG+GGG | - | chr5_1:13302091-13302110 | Msa0718910:CDS | 35.0% | |
| TAATTTGATCCATGTAACGG+GGG | - | chr5_1:13302092-13302111 | Msa0718910:CDS | 35.0% | |
| ! | GTATAAACTATGGGCTTGTT+TGG | - | chr5_1:13302213-13302232 | Msa0718910:intron | 35.0% |
| !! | CTAAATATTCAGGCCTTGTT+TGG | - | chr5_1:13302492-13302511 | Msa0718910:intron | 35.0% |
| ACAAGCTGTTAATCCAAACA+AGG | + | chr5_1:13302508-13302527 | None:intergenic | 35.0% | |
| GCTGTTCTCATAAACTATCT+TGG | - | chr5_1:13302607-13302626 | Msa0718910:intron | 35.0% | |
| ! | TTTTCACAAGGAACCTATCT+AGG | - | chr5_1:13303054-13303073 | Msa0718910:intron | 35.0% |
| TTTCATAAGCTCTCCTAGAT+AGG | + | chr5_1:13303070-13303089 | None:intergenic | 35.0% | |
| AAGCACTTGTGAGACTATTT+GGG | + | chr5_1:13303144-13303163 | None:intergenic | 35.0% | |
| TAAGCACTTGTGAGACTATT+TGG | + | chr5_1:13303145-13303164 | None:intergenic | 35.0% | |
| ! | TTATTCAATTCTAGGGACTC+GGG | - | chr5_1:13303410-13303429 | Msa0718910:CDS | 35.0% |
| ! | TTTTCATCCATTTTAGGCAC+TGG | + | chr5_1:13303573-13303592 | None:intergenic | 35.0% |
| ATCTTACTGAACCTGAAAAG+TGG | - | chr5_1:13303850-13303869 | Msa0718910:intron | 35.0% | |
| !!! | ACAATGCCTTTTTCAGTGTT+TGG | + | chr5_1:13304019-13304038 | None:intergenic | 35.0% |
| !! | AAACCTGCTGCTTTCTTTAA+GGG | - | chr5_1:13304041-13304060 | Msa0718910:intron | 35.0% |
| TGATTATGTACCTCACATAG+TGG | + | chr5_1:13304077-13304096 | None:intergenic | 35.0% | |
| ATATTGGCCAATCATCAGTT+AGG | + | chr5_1:13304128-13304147 | None:intergenic | 35.0% | |
| ! | TTATGTCACCTTTTCCAAAC+AGG | + | chr5_1:13304447-13304466 | None:intergenic | 35.0% |
| TTGGAAAAGGTGACATAACA+TGG | - | chr5_1:13304449-13304468 | Msa0718910:intron | 35.0% | |
| TGGAAAAGGTGACATAACAT+GGG | - | chr5_1:13304450-13304469 | Msa0718910:intron | 35.0% | |
| ! | GACATGCATTTGGTGATATT+TGG | - | chr5_1:13304656-13304675 | Msa0718910:intron | 35.0% |
| ATCCTTAAACGATGCGTTTA+GGG | + | chr5_1:13304900-13304919 | None:intergenic | 35.0% | |
| AATCCTTAAACGATGCGTTT+AGG | + | chr5_1:13304901-13304920 | None:intergenic | 35.0% | |
| GCCTTTACATATACCATAAG+TGG | - | chr5_1:13305051-13305070 | Msa0718910:intron | 35.0% | |
| !!! | GGTTTTGTTTAGACCACTTA+TGG | + | chr5_1:13305067-13305086 | None:intergenic | 35.0% |
| AGAATAAAGTCAAACCAGAG+AGG | + | chr5_1:13305112-13305131 | None:intergenic | 35.0% | |
| TTAACATACCTTGAATGGAG+TGG | + | chr5_1:13305211-13305230 | None:intergenic | 35.0% | |
| TGTTAGTACTTGATATACGG+AGG | + | chr5_1:13305634-13305653 | None:intergenic | 35.0% | |
| ACTTCATGATATCAGAGCTA+TGG | + | chr5_1:13305957-13305976 | None:intergenic | 35.0% | |
| TAAGCCCATACACTTACAAA+AGG | - | chr5_1:13306249-13306268 | Msa0718910:intron | 35.0% | |
| TTATACCATAATTGGGCAGT+TGG | - | chr5_1:13306309-13306328 | Msa0718910:intron | 35.0% | |
| TATACCATAATTGGGCAGTT+GGG | - | chr5_1:13306310-13306329 | Msa0718910:intron | 35.0% | |
| !! | ATTCAACTGGTTTGAGCTAA+GGG | - | chr5_1:13306335-13306354 | Msa0718910:intron | 35.0% |
| !!! | TATTTTTTTCTCCTTTGCCC+AGG | + | chr5_1:13306389-13306408 | None:intergenic | 35.0% |
| CTAAAAGACACCTTCACAAA+AGG | + | chr5_1:13306496-13306515 | None:intergenic | 35.0% | |
| AAAGTGAAAATCACACCTTG+AGG | - | chr5_1:13306593-13306612 | Msa0718910:intron | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr5_1:13306839-13306858 | None:intergenic | 35.0% | |
| AGTAAATGGGTCAGATATTC+CGG | - | chr5_1:13307007-13307026 | Msa0718910:intron | 35.0% | |
| AATCTTGGTTATGACAGAAG+AGG | - | chr5_1:13307079-13307098 | Msa0718910:intron | 35.0% | |
| !!! | TGTGCACATCCGTTTTTTAT+TGG | - | chr5_1:13307421-13307440 | Msa0718910:intron | 35.0% |
| AAAAACACCAGAATGGCATT+TGG | - | chr5_1:13307747-13307766 | Msa0718910:intron | 35.0% | |
| AAAACACCAGAATGGCATTT+GGG | - | chr5_1:13307748-13307767 | Msa0718910:intron | 35.0% | |
| GTGATAAGTGACATCAAAAG+TGG | + | chr5_1:13307791-13307810 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | - | chr5_1:13308066-13308085 | Msa0718910:intron | 35.0% | |
| TCGGTACAATACACCAAAAA+TGG | - | chr5_1:13308095-13308114 | Msa0718910:intron | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | - | chr5_1:13308098-13308117 | Msa0718910:intron | 35.0% | |
| GTACAAAAATGAACTGCAGA+AGG | - | chr5_1:13308347-13308366 | Msa0718910:intron | 35.0% | |
| !! | TCTAGCTCTCTACTTATTTC+AGG | + | chr5_1:13308508-13308527 | None:intergenic | 35.0% |
| TGTTTAGTGTACCTTGAGTT+AGG | - | chr5_1:13308655-13308674 | Msa0718910:intron | 35.0% | |
| AAAAAATCTACAGAGGACCA+GGG | + | chr5_1:13308858-13308877 | None:intergenic | 35.0% | |
| AAAAAAATCTACAGAGGACC+AGG | + | chr5_1:13308859-13308878 | None:intergenic | 35.0% | |
| TCTTCGAAATTTATGCTGCA+AGG | + | chr5_1:13308939-13308958 | None:intergenic | 35.0% | |
| TCTAACATTCTTAATGTGGC+CGG | + | chr5_1:13309236-13309255 | None:intergenic | 35.0% | |
| !! | GTCTTGTTTATCACAGATAC+TGG | + | chr5_1:13309301-13309320 | None:intergenic | 35.0% |
| ! | TAATTTGTAGCGGTGGATGA+AGG | + | chr5_1:13301357-13301376 | None:intergenic | 40.0% |
| AGGTGGAAAAACTAGGGTTT+AGG | + | chr5_1:13301384-13301403 | None:intergenic | 40.0% | |
| ATCAATGGCGAAGAAGAGAA+AGG | - | chr5_1:13301427-13301446 | Msa0718910:CDS | 40.0% | |
| TCACCAACAATGGGAACATT+CGG | + | chr5_1:13301677-13301696 | None:intergenic | 40.0% | |
| ACATCATCCTCACCAACAAT+GGG | + | chr5_1:13301686-13301705 | None:intergenic | 40.0% | |
| AACATCATCCTCACCAACAA+TGG | + | chr5_1:13301687-13301706 | None:intergenic | 40.0% | |
| ! | TTTTCTAGGTCTTCCTCTGA+TGG | + | chr5_1:13301983-13302002 | None:intergenic | 40.0% |
| ! | AATTTGATCCATGTAACGGG+GGG | - | chr5_1:13302093-13302112 | Msa0718910:CDS | 40.0% |
| ! | AAAAAATGCCAAACGGGCTT+GGG | + | chr5_1:13302750-13302769 | None:intergenic | 40.0% |
| ! | AAAAAAATGCCAAACGGGCT+TGG | + | chr5_1:13302751-13302770 | None:intergenic | 40.0% |
| AGTCTCACAAGTGCTTATGT+TGG | - | chr5_1:13303148-13303167 | Msa0718910:intron | 40.0% | |
| TTAGGAGTTAGGAGTCTGTT+TGG | + | chr5_1:13303197-13303216 | None:intergenic | 40.0% | |
| AATTCAGGATATTACTCCGG+AGG | - | chr5_1:13303370-13303389 | Msa0718910:CDS | 40.0% | |
| TGGTGTCTGTAAGTGTTATC+TGG | + | chr5_1:13303439-13303458 | None:intergenic | 40.0% | |
| GCAATACGAAAGATGGTTCA+AGG | + | chr5_1:13303736-13303755 | None:intergenic | 40.0% | |
| TGAACCATCTTTCGTATTGC+AGG | - | chr5_1:13303736-13303755 | Msa0718910:intron | 40.0% | |
| GAACCATCTTTCGTATTGCA+GGG | - | chr5_1:13303737-13303756 | Msa0718910:intron | 40.0% | |
| TACAATAGGCAAAATCCCCA+AGG | - | chr5_1:13303782-13303801 | Msa0718910:intron | 40.0% | |
| GGATGTGTTTAAATGCCTTG+GGG | + | chr5_1:13303800-13303819 | None:intergenic | 40.0% | |
| GGGATGTGTTTAAATGCCTT+GGG | + | chr5_1:13303801-13303820 | None:intergenic | 40.0% | |
| ACATCCCCTCAATGCAAAAT+TGG | - | chr5_1:13303814-13303833 | Msa0718910:intron | 40.0% | |
| CATCCCCTCAATGCAAAATT+GGG | - | chr5_1:13303815-13303834 | Msa0718910:intron | 40.0% | |
| ! | TCCTCCCAATTTTGCATTGA+GGG | + | chr5_1:13303822-13303841 | None:intergenic | 40.0% |
| ! | GTGGCTTGAAACAAAGCATT+TGG | + | chr5_1:13303879-13303898 | None:intergenic | 40.0% |
| !! | ATGCTTTGTTTCAAGCCACT+AGG | - | chr5_1:13303880-13303899 | Msa0718910:intron | 40.0% |
| ATAAAGCAAAATGCAGCCGT+TGG | + | chr5_1:13303995-13304014 | None:intergenic | 40.0% | |
| !! | CAAACCTGCTGCTTTCTTTA+AGG | - | chr5_1:13304040-13304059 | Msa0718910:intron | 40.0% |
| ATTCCCTTAAAGAAAGCAGC+AGG | + | chr5_1:13304047-13304066 | None:intergenic | 40.0% | |
| AAACAGAGAAGGCAACAAGA+GGG | + | chr5_1:13304550-13304569 | None:intergenic | 40.0% | |
| TAAACAGAGAAGGCAACAAG+AGG | + | chr5_1:13304551-13304570 | None:intergenic | 40.0% | |
| CAACAGTAGCTAAACAGAGA+AGG | + | chr5_1:13304561-13304580 | None:intergenic | 40.0% | |
| ! | GCATTTGGTGATATTTGGTC+TGG | - | chr5_1:13304661-13304680 | Msa0718910:intron | 40.0% |
| TAAGGGTCTTGCCAACTATT+AGG | - | chr5_1:13304858-13304877 | Msa0718910:intron | 40.0% | |
| AAGGGTCTTGCCAACTATTA+GGG | - | chr5_1:13304859-13304878 | Msa0718910:intron | 40.0% | |
| AATGCTCTTAAGTCACTCAC+TGG | - | chr5_1:13305023-13305042 | Msa0718910:intron | 40.0% | |
| GATACAAGGAAGCAAGTGTT+TGG | - | chr5_1:13305265-13305284 | Msa0718910:intron | 40.0% | |
| AAACCAATCCTTGACCACTA+TGG | + | chr5_1:13305320-13305339 | None:intergenic | 40.0% | |
| CTTAGTGTACACCTTTCATG+TGG | - | chr5_1:13305731-13305750 | Msa0718910:intron | 40.0% | |
| ! | TTGCACTATTGAAGCTTGCT+GGG | - | chr5_1:13305840-13305859 | Msa0718910:intron | 40.0% |
| TGGATTATTGTGGCACAACA+AGG | - | chr5_1:13305864-13305883 | Msa0718910:intron | 40.0% | |
| ! | CTAGAAGACACCTTTTGTGA+AGG | - | chr5_1:13306483-13306502 | Msa0718910:intron | 40.0% |
| ! | TTTTAGCAAGTCACACCTCA+AGG | + | chr5_1:13306611-13306630 | None:intergenic | 40.0% |
| TTGCTAAAAGACACCACCAA+AGG | - | chr5_1:13306622-13306641 | Msa0718910:CDS | 40.0% | |
| TGCTAAAAGACACCACCAAA+GGG | - | chr5_1:13306623-13306642 | Msa0718910:CDS | 40.0% | |
| GTAAATGGGTCAGATATTCC+GGG | - | chr5_1:13307008-13307027 | Msa0718910:intron | 40.0% | |
| CTAGGACAATGCCTGTTATA+TGG | - | chr5_1:13307339-13307358 | Msa0718910:intron | 40.0% | |
| !! | AGTGATTGGTGCCATATAAC+AGG | + | chr5_1:13307353-13307372 | None:intergenic | 40.0% |
| GCACAAATGCAAGAAGTGAT+TGG | + | chr5_1:13307367-13307386 | None:intergenic | 40.0% | |
| GGAAAATGCAACTCGAGTAA+TGG | - | chr5_1:13307489-13307508 | Msa0718910:intron | 40.0% | |
| CATTCGCTACTATCCTATAG+TGG | + | chr5_1:13307632-13307651 | None:intergenic | 40.0% | |
| ATTGAGAGACAGTGCTATAG+CGG | + | chr5_1:13307661-13307680 | None:intergenic | 40.0% | |
| ! | ATCGACTCTCTGTTAAGAAC+TGG | + | chr5_1:13307932-13307951 | None:intergenic | 40.0% |
| ! | AAGGTCATGGGTTTAAGTTC+TGG | - | chr5_1:13308039-13308058 | Msa0718910:intron | 40.0% |
| CAGCCTCTTGTGTAAAAAAC+AGG | - | chr5_1:13308065-13308084 | Msa0718910:intron | 40.0% | |
| !!! | CACCCTGTTTTTTACACAAG+AGG | + | chr5_1:13308071-13308090 | None:intergenic | 40.0% |
| CTTGTGTAAAAAACAGGGTG+AGG | - | chr5_1:13308071-13308090 | Msa0718910:intron | 40.0% | |
| ACAGAAGGCTTAGTCAGAAA+AGG | + | chr5_1:13308322-13308341 | None:intergenic | 40.0% | |
| TGAACTGCAGAAGGAAGATA+AGG | - | chr5_1:13308356-13308375 | Msa0718910:intron | 40.0% | |
| AAGCGAAGTAGAGAAAAGGA+GGG | + | chr5_1:13308601-13308620 | None:intergenic | 40.0% | |
| AAAGCGAAGTAGAGAAAAGG+AGG | + | chr5_1:13308602-13308621 | None:intergenic | 40.0% | |
| TGTACCTTGAGTTAGGATCA+CGG | - | chr5_1:13308662-13308681 | Msa0718910:intron | 40.0% | |
| AAAAATCTACAGAGGACCAG+GGG | + | chr5_1:13308857-13308876 | None:intergenic | 40.0% | |
| AGTCTTGGCAACATATTCTC+TGG | - | chr5_1:13308905-13308924 | Msa0718910:intron | 40.0% | |
| CGAAATTTATGCTGCAAGGA+AGG | + | chr5_1:13308935-13308954 | None:intergenic | 40.0% | |
| CAATTGACATGTCTGTGTAG+TGG | - | chr5_1:13309122-13309141 | Msa0718910:CDS | 40.0% | |
| TTTATCACAGATACTGGAGC+GGG | + | chr5_1:13309295-13309314 | None:intergenic | 40.0% | |
| GTTTATCACAGATACTGGAG+CGG | + | chr5_1:13309296-13309315 | None:intergenic | 40.0% | |
| TCCAGATGTACCAATGGAAT+TGG | - | chr5_1:13309345-13309364 | Msa0718910:five_prime_UTR | 40.0% | |
| TCCAATTCCATTGGTACATC+TGG | + | chr5_1:13309349-13309368 | None:intergenic | 40.0% | |
| TAGCGGTGGATGAAGGATTT+CGG | + | chr5_1:13301350-13301369 | None:intergenic | 45.0% | |
| ! | AGGTCGATAATTTGTAGCGG+TGG | + | chr5_1:13301364-13301383 | None:intergenic | 45.0% |
| GCTTCGAGGTGGAAAAACTA+GGG | + | chr5_1:13301390-13301409 | None:intergenic | 45.0% | |
| TGCTTCGAGGTGGAAAAACT+AGG | + | chr5_1:13301391-13301410 | None:intergenic | 45.0% | |
| GAATCTGTTCTTCTGCTTCG+AGG | + | chr5_1:13301404-13301423 | None:intergenic | 45.0% | |
| !! | TGGAGCTTTGGAGGATTTCT+TGG | + | chr5_1:13301507-13301526 | None:intergenic | 45.0% |
| CAATCAACTCGCCTTCTTTC+TGG | + | chr5_1:13301538-13301557 | None:intergenic | 45.0% | |
| AGCTAAGCTTCAACTCAGAG+AGG | - | chr5_1:13301589-13301608 | Msa0718910:intron | 45.0% | |
| TCAACTCAGAGAGGTTGAAG+AGG | - | chr5_1:13301598-13301617 | Msa0718910:intron | 45.0% | |
| GTTACCAGAAGTTCGTTTCG+CGG | - | chr5_1:13301638-13301657 | Msa0718910:intron | 45.0% | |
| GAATGTTCCCATTGTTGGTG+AGG | - | chr5_1:13301676-13301695 | Msa0718910:intron | 45.0% | |
| ! | GTTGGTGAGGATGATGTTGA+TGG | - | chr5_1:13301689-13301708 | Msa0718910:intron | 45.0% |
| CAGGAACTTCACCATCAACA+TGG | + | chr5_1:13301754-13301773 | None:intergenic | 45.0% | |
| ! | GGACGAGTTGGACTGAAATA+TGG | - | chr5_1:13302043-13302062 | Msa0718910:intron | 45.0% |
| AGTCTCACGAAACTTGTGCT+AGG | - | chr5_1:13302701-13302720 | Msa0718910:intron | 45.0% | |
| ! | AAAAATGCCAAACGGGCTTG+GGG | + | chr5_1:13302749-13302768 | None:intergenic | 45.0% |
| TCCGGAGGATGAGAGAATAT+TGG | - | chr5_1:13303385-13303404 | Msa0718910:CDS | 45.0% | |
| GCCAATATTCTCTCATCCTC+CGG | + | chr5_1:13303389-13303408 | None:intergenic | 45.0% | |
| GAATCCACCAGTGCCTAAAA+TGG | - | chr5_1:13303563-13303582 | Msa0718910:intron | 45.0% | |
| !!! | TCATCCATTTTAGGCACTGG+TGG | + | chr5_1:13303570-13303589 | None:intergenic | 45.0% |
| CAACCCTGCAATACGAAAGA+TGG | + | chr5_1:13303743-13303762 | None:intergenic | 45.0% | |
| CATCTTTCGTATTGCAGGGT+TGG | - | chr5_1:13303741-13303760 | Msa0718910:intron | 45.0% | |
| GGGGATGTGTTTAAATGCCT+TGG | + | chr5_1:13303802-13303821 | None:intergenic | 45.0% | |
| ! | CCTCCCAATTTTGCATTGAG+GGG | + | chr5_1:13303821-13303840 | None:intergenic | 45.0% |
| ! | CTCCTCCCAATTTTGCATTG+AGG | + | chr5_1:13303823-13303842 | None:intergenic | 45.0% |
| CTCAATGCAAAATTGGGAGG+AGG | - | chr5_1:13303821-13303840 | Msa0718910:intron | 45.0% | |
| !! | GCATTTGGAGACCACTTTTC+AGG | + | chr5_1:13303864-13303883 | None:intergenic | 45.0% |
| AAGGTGACATAACATGGGTG+TGG | - | chr5_1:13304455-13304474 | Msa0718910:intron | 45.0% | |
| GACATAACATGGGTGTGGAA+TGG | - | chr5_1:13304460-13304479 | Msa0718910:intron | 45.0% | |
| AGGCAACAAGAGGGAAAACA+GGG | + | chr5_1:13304541-13304560 | None:intergenic | 45.0% | |
| AAGGCAACAAGAGGGAAAAC+AGG | + | chr5_1:13304542-13304561 | None:intergenic | 45.0% | |
| GTTCGCAAGACCCTAATAGT+TGG | + | chr5_1:13304872-13304891 | None:intergenic | 45.0% | |
| TGCCCTAAACGCATCGTTTA+AGG | - | chr5_1:13304895-13304914 | Msa0718910:intron | 45.0% | |
| CTCAGAGAAGCAGTCATTGT+TGG | - | chr5_1:13305157-13305176 | Msa0718910:intron | 45.0% | |
| CTATTCCTCCACTCCATTCA+AGG | - | chr5_1:13305200-13305219 | Msa0718910:intron | 45.0% | |
| ACATACCTTGAATGGAGTGG+AGG | + | chr5_1:13305208-13305227 | None:intergenic | 45.0% | |
| ! | TGCATTGATGCATGCCATAG+TGG | - | chr5_1:13305303-13305322 | Msa0718910:intron | 45.0% |
| ATGCCATAGTGGTCAAGGAT+TGG | - | chr5_1:13305314-13305333 | Msa0718910:intron | 45.0% | |
| !! | GCAGTAACTTTTAAGCGCTG+AGG | + | chr5_1:13305700-13305719 | None:intergenic | 45.0% |
| GTTGCACTATTGAAGCTTGC+TGG | - | chr5_1:13305839-13305858 | Msa0718910:intron | 45.0% | |
| !! | ACTATTGAAGCTTGCTGGGA+TGG | - | chr5_1:13305844-13305863 | Msa0718910:intron | 45.0% |
| !! | CTTGCTGGGATGGATTATTG+TGG | - | chr5_1:13305854-13305873 | Msa0718910:intron | 45.0% |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | - | chr5_1:13306341-13306360 | Msa0718910:intron | 45.0% |
| TGAGCTAAGGGATAAGGAGT+TGG | - | chr5_1:13306347-13306366 | Msa0718910:intron | 45.0% | |
| GATAAGGAGTTGGAGGTCTT+GGG | - | chr5_1:13306357-13306376 | Msa0718910:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr5_1:13306626-13306645 | Msa0718910:CDS | 45.0% | |
| ! | CAAACTGGCTCAGATATTCC+GGG | + | chr5_1:13306824-13306843 | None:intergenic | 45.0% |
| ! | CCAAACTGGCTCAGATATTC+CGG | + | chr5_1:13306825-13306844 | None:intergenic | 45.0% |
| ATATGCTTTGCCGTATCGTG+TGG | - | chr5_1:13307274-13307293 | Msa0718910:CDS | 45.0% | |
| ACTGCATCAACCACACGATA+CGG | + | chr5_1:13307287-13307306 | None:intergenic | 45.0% | |
| CACTTCTTGCATTTGTGCAG+AGG | - | chr5_1:13307369-13307388 | Msa0718910:intron | 45.0% | |
| GCTACTATCCTATAGTGGCT+AGG | + | chr5_1:13307627-13307646 | None:intergenic | 45.0% | |
| ATCAAAAGTGGGACACTGAG+AGG | + | chr5_1:13307779-13307798 | None:intergenic | 45.0% | |
| AGAGGGGAAGGGAATGTATT+TGG | - | chr5_1:13307848-13307867 | Msa0718910:intron | 45.0% | |
| GAGGGGAAGGGAATGTATTT+GGG | - | chr5_1:13307849-13307868 | Msa0718910:intron | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | - | chr5_1:13308020-13308039 | Msa0718910:intron | 45.0% | |
| TCACGTGACTGAAAGGTCAT+GGG | - | chr5_1:13308027-13308046 | Msa0718910:intron | 45.0% | |
| GTAAAAAACAGGGTGAGGCT+CGG | - | chr5_1:13308076-13308095 | Msa0718910:intron | 45.0% | |
| !!! | CGGGAGCTTTTTTAGTTCAC+CGG | - | chr5_1:13308146-13308165 | Msa0718910:intron | 45.0% |
| !!! | GGGAGCTTTTTTAGTTCACC+GGG | - | chr5_1:13308147-13308166 | Msa0718910:intron | 45.0% |
| TAAGAAAATAAGGGGCAGCC+CGG | + | chr5_1:13308168-13308187 | None:intergenic | 45.0% | |
| CTGACTAAGCCTTCTGTTTC+AGG | - | chr5_1:13308325-13308344 | Msa0718910:intron | 45.0% | |
| ACAATAAAACTCAGGACCCC+TGG | - | chr5_1:13308838-13308857 | Msa0718910:intron | 45.0% | |
| TGTTGCCAAGACTGAATTGC+AGG | + | chr5_1:13308898-13308917 | None:intergenic | 45.0% | |
| GAGCGGGTAATGAATAGTCA+AGG | + | chr5_1:13309279-13309298 | None:intergenic | 45.0% | |
| CGACATTCCAGATGTACCAA+TGG | - | chr5_1:13309339-13309358 | Msa0718910:five_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | + | chr5_1:13306438-13306457 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAGTAAATT+TGG | - | chr5_1:13307541-13307560 | Msa0718910:intron | 5.0% |
| TGAAGGATTTCGGCTGCGTT+GGG | + | chr5_1:13301340-13301359 | None:intergenic | 50.0% | |
| ATGAAGGATTTCGGCTGCGT+TGG | + | chr5_1:13301341-13301360 | None:intergenic | 50.0% | |
| TCTGTTCTTCTGCTTCGAGG+TGG | + | chr5_1:13301401-13301420 | None:intergenic | 50.0% | |
| ! | CGTCTGGAATGAAGGGTTCA+GGG | + | chr5_1:13301466-13301485 | None:intergenic | 50.0% |
| CCTGAACCCTTCATTCCAGA+CGG | - | chr5_1:13301464-13301483 | Msa0718910:CDS | 50.0% | |
| ! | TCAGTGCCGTCTGGAATGAA+GGG | + | chr5_1:13301473-13301492 | None:intergenic | 50.0% |
| ! | TTCAGTGCCGTCTGGAATGA+AGG | + | chr5_1:13301474-13301493 | None:intergenic | 50.0% |
| !! | CCTTCTTTCTGGTGGCGTTT+TGG | + | chr5_1:13301527-13301546 | None:intergenic | 50.0% |
| CCAAAACGCCACCAGAAAGA+AGG | - | chr5_1:13301524-13301543 | Msa0718910:intron | 50.0% | |
| TCAACTCGCCTTCTTTCTGG+TGG | + | chr5_1:13301535-13301554 | None:intergenic | 50.0% | |
| GCTCCGAATGTTCCCATTGT+TGG | - | chr5_1:13301671-13301690 | Msa0718910:intron | 50.0% | |
| ! | AAAATGCCAAACGGGCTTGG+GGG | + | chr5_1:13302748-13302767 | None:intergenic | 50.0% |
| ! | TTCAATTCTAGGGACTCGGG+TGG | - | chr5_1:13303413-13303432 | Msa0718910:CDS | 50.0% |
| TTAGCAGGACCTGTTGCTAC+AGG | - | chr5_1:13303470-13303489 | Msa0718910:intron | 50.0% | |
| CTTTCGTATTGCAGGGTTGG+AGG | - | chr5_1:13303744-13303763 | Msa0718910:intron | 50.0% | |
| CCCCTCAATGCAAAATTGGG+AGG | - | chr5_1:13303818-13303837 | Msa0718910:intron | 50.0% | |
| ACATGGGTGTGGAATGGTGA+AGG | - | chr5_1:13304466-13304485 | Msa0718910:intron | 50.0% | |
| GGCAACAAGAGGGAAAACAG+GGG | + | chr5_1:13304540-13304559 | None:intergenic | 50.0% | |
| GATGCATGCCATAGTGGTCA+AGG | - | chr5_1:13305309-13305328 | Msa0718910:intron | 50.0% | |
| AGTTAGGGTGCGTCAGACAT+TGG | + | chr5_1:13305801-13305820 | None:intergenic | 50.0% | |
| GCTAAGGGATAAGGAGTTGG+AGG | - | chr5_1:13306350-13306369 | Msa0718910:intron | 50.0% | |
| GGATAAGGAGTTGGAGGTCT+TGG | - | chr5_1:13306356-13306375 | Msa0718910:intron | 50.0% | |
| GAGGTCTTGGGTTCAAACCT+GGG | - | chr5_1:13306369-13306388 | Msa0718910:intron | 50.0% | |
| TTGGGTTCAAACCTGGGCAA+AGG | - | chr5_1:13306375-13306394 | Msa0718910:intron | 50.0% | |
| TCTTGCTAGAAGCCACCCTT+TGG | + | chr5_1:13306641-13306660 | None:intergenic | 50.0% | |
| ATCATATACTCCCTCCGTCC+CGG | - | chr5_1:13306803-13306822 | Msa0718910:CDS | 50.0% | |
| CCGGAATATCTGAGCCAGTT+TGG | - | chr5_1:13306822-13306841 | Msa0718910:CDS | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr5_1:13307012-13307031 | Msa0718910:intron | 50.0% | |
| GAGTGTCTCCTAGCCACTAT+AGG | - | chr5_1:13307616-13307635 | Msa0718910:intron | 50.0% | |
| GCTGTGGCTGACTAGAGAAA+GGG | + | chr5_1:13307813-13307832 | None:intergenic | 50.0% | |
| AGCTGTGGCTGACTAGAGAA+AGG | + | chr5_1:13307814-13307833 | None:intergenic | 50.0% | |
| TTCTCTAGTCAGCCACAGCT+AGG | - | chr5_1:13307814-13307833 | Msa0718910:intron | 50.0% | |
| TCTCTAGTCAGCCACAGCTA+GGG | - | chr5_1:13307815-13307834 | Msa0718910:intron | 50.0% | |
| ! | GTATTTGGGCTAGAGCCTAG+AGG | - | chr5_1:13307863-13307882 | Msa0718910:intron | 50.0% |
| TGTAATCAAAGGGGGAGCCT+TGG | - | chr5_1:13307985-13308004 | Msa0718910:intron | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | + | chr5_1:13308005-13308024 | None:intergenic | 50.0% | |
| GTCACGTGACTGAAAGGTCA+TGG | - | chr5_1:13308026-13308045 | Msa0718910:intron | 50.0% | |
| AAAAAGCTCCCGCATACGCA+GGG | + | chr5_1:13308138-13308157 | None:intergenic | 50.0% | |
| AAAAAAGCTCCCGCATACGC+AGG | + | chr5_1:13308139-13308158 | None:intergenic | 50.0% | |
| TTTCACCTCGGTTACGACTG+TGG | + | chr5_1:13308531-13308550 | None:intergenic | 50.0% | |
| CAGTCGTAACCGAGGTGAAA+AGG | - | chr5_1:13308531-13308550 | Msa0718910:intron | 50.0% | |
| TCGTAACCGAGGTGAAAAGG+AGG | - | chr5_1:13308534-13308553 | Msa0718910:intron | 50.0% | |
| ! | GATCGTCCTCCTTTTCACCT+CGG | + | chr5_1:13308543-13308562 | None:intergenic | 50.0% |
| TTAGGATCACGGCAGGCTTA+AGG | - | chr5_1:13308673-13308692 | Msa0718910:intron | 50.0% | |
| TGCTGCCTGCAATTCAGTCT+TGG | - | chr5_1:13308890-13308909 | Msa0718910:intron | 50.0% | |
| ! | CCGTCTGGAATGAAGGGTTC+AGG | + | chr5_1:13301467-13301486 | None:intergenic | 55.0% |
| TTGGCGTATTCAGTGCCGTC+TGG | + | chr5_1:13301482-13301501 | None:intergenic | 55.0% | |
| !!! | GTGGCGTTTTGGAGCTTTGG+AGG | + | chr5_1:13301516-13301535 | None:intergenic | 55.0% |
| !!! | CTGGTGGCGTTTTGGAGCTT+TGG | + | chr5_1:13301519-13301538 | None:intergenic | 55.0% |
| CACACCGCGAAACGAACTTC+TGG | + | chr5_1:13301645-13301664 | None:intergenic | 55.0% | |
| CAGAAGTTCGTTTCGCGGTG+TGG | - | chr5_1:13301643-13301662 | Msa0718910:intron | 55.0% | |
| TTCGTTTCGCGGTGTGGAAG+AGG | - | chr5_1:13301649-13301668 | Msa0718910:intron | 55.0% | |
| ! | TGATCCATGTAACGGGGGGA+AGG | - | chr5_1:13302097-13302116 | Msa0718910:CDS | 55.0% |
| ! | GATCCATGTAACGGGGGGAA+GGG | - | chr5_1:13302098-13302117 | Msa0718910:CDS | 55.0% |
| ! | ATCCATGTAACGGGGGGAAG+GGG | - | chr5_1:13302099-13302118 | Msa0718910:CDS | 55.0% |
| ! | AAATGCCAAACGGGCTTGGG+GGG | + | chr5_1:13302747-13302766 | None:intergenic | 55.0% |
| GGAGGTCTTGGGTTCAAACC+TGG | - | chr5_1:13306368-13306387 | Msa0718910:intron | 55.0% | |
| TGCTAGAAGCCACCCTTTGG+TGG | + | chr5_1:13306638-13306657 | None:intergenic | 55.0% | |
| CTCAGATATTCCGGGACGGA+GGG | + | chr5_1:13306816-13306835 | None:intergenic | 55.0% | |
| CTGGCTCAGATATTCCGGGA+CGG | + | chr5_1:13306820-13306839 | None:intergenic | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr5_1:13307016-13307035 | Msa0718910:intron | 55.0% | |
| AACTACTACTCCCTCCGTCC+CGG | + | chr5_1:13307029-13307048 | None:intergenic | 55.0% | |
| GAGAGGCCCAAATGCCATTC+TGG | + | chr5_1:13307757-13307776 | None:intergenic | 55.0% | |
| AAGTGGGACACTGAGAGGAG+AGG | + | chr5_1:13307774-13307793 | None:intergenic | 55.0% | |
| ! | TCAGCCACAGCTAGGGCATT+GGG | - | chr5_1:13307822-13307841 | Msa0718910:intron | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | + | chr5_1:13308111-13308130 | None:intergenic | 55.0% |
| CTAGACCACAGTCGTAACCG+AGG | - | chr5_1:13308523-13308542 | Msa0718910:intron | 55.0% | |
| CCTGCCGTGATCCTAACTCA+AGG | + | chr5_1:13308669-13308688 | None:intergenic | 55.0% | |
| CCTTGAGTTAGGATCACGGC+AGG | - | chr5_1:13308666-13308685 | Msa0718910:intron | 55.0% | |
| ! | TCCATGTAACGGGGGGAAGG+GGG | - | chr5_1:13302100-13302119 | Msa0718910:CDS | 60.0% |
| GCTCAGATATTCCGGGACGG+AGG | + | chr5_1:13306817-13306836 | None:intergenic | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | - | chr5_1:13307015-13307034 | Msa0718910:intron | 60.0% | |
| GTCAGCCACAGCTAGGGCAT+TGG | - | chr5_1:13307821-13307840 | Msa0718910:intron | 60.0% | |
| TCCACCCAATGCCCTAGCTG+TGG | + | chr5_1:13307829-13307848 | None:intergenic | 60.0% | |
| !! | AGCTAGGGCATTGGGTGGAG+AGG | - | chr5_1:13307830-13307849 | Msa0718910:intron | 60.0% |
| !! | GCTAGGGCATTGGGTGGAGA+GGG | - | chr5_1:13307831-13307850 | Msa0718910:intron | 60.0% |
| !! | CTAGGGCATTGGGTGGAGAG+GGG | - | chr5_1:13307832-13307851 | Msa0718910:intron | 60.0% |
| GCATTGGGTGGAGAGGGGAA+GGG | - | chr5_1:13307837-13307856 | Msa0718910:intron | 60.0% | |
| CATACGCAGGGTCTGGGAAG+GGG | + | chr5_1:13308126-13308145 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | + | chr5_1:13308127-13308146 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | - | chr5_1:13308126-13308145 | Msa0718910:intron | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | - | chr5_1:13308127-13308146 | Msa0718910:intron | 60.0% | |
| TCCCCCTTCCCCCCGTTACA+TGG | + | chr5_1:13302104-13302123 | None:intergenic | 65.0% | |
| ! | TGTAACGGGGGGAAGGGGGA+AGG | - | chr5_1:13302104-13302123 | Msa0718910:CDS | 65.0% |
| CTCAACCCCCCAAGCCCGTT+TGG | - | chr5_1:13302739-13302758 | Msa0718910:intron | 65.0% | |
| !! | GCCACAGCTAGGGCATTGGG+TGG | - | chr5_1:13307825-13307844 | Msa0718910:intron | 65.0% |
| ! | GGCATTGGGTGGAGAGGGGA+AGG | - | chr5_1:13307836-13307855 | Msa0718910:intron | 65.0% |
| AAGGGGGAGCCTTGGCGCAA+CGG | - | chr5_1:13307993-13308012 | Msa0718910:intron | 65.0% | |
| CGCATACGCAGGGTCTGGGA+AGG | + | chr5_1:13308128-13308147 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | + | chr5_1:13308132-13308151 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | + | chr5_1:13308133-13308152 | None:intergenic | 70.0% | |
| CGGGGGGAAGGGGGAAGGCT+TGG | - | chr5_1:13302109-13302128 | Msa0718910:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 13301335 | 13309372 | 13301335 | ID=Msa0718910;Name=Msa0718910 |
| chr5_1 | mRNA | 13301335 | 13309372 | 13301335 | ID=Msa0718910-mRNA-1;Parent=Msa0718910;Name=Msa0718910-mRNA-1;_AED=0.19;_eAED=0.19;_QI=96|0.88|0.8|1|1|1|10|0|493 |
| chr5_1 | exon | 13301335 | 13301502 | 13301335 | ID=Msa0718910-mRNA-1:exon:5448;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13302080 | 13302208 | 13302080 | ID=Msa0718910-mRNA-1:exon:5447;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13302288 | 13302360 | 13302288 | ID=Msa0718910-mRNA-1:exon:5446;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13303317 | 13303463 | 13303317 | ID=Msa0718910-mRNA-1:exon:5445;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13304822 | 13304869 | 13304822 | ID=Msa0718910-mRNA-1:exon:5444;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13305486 | 13305565 | 13305486 | ID=Msa0718910-mRNA-1:exon:5443;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13306622 | 13306949 | 13306622 | ID=Msa0718910-mRNA-1:exon:5442;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13307094 | 13307145 | 13307094 | ID=Msa0718910-mRNA-1:exon:5441;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13307216 | 13307330 | 13307216 | ID=Msa0718910-mRNA-1:exon:5440;Parent=Msa0718910-mRNA-1 |
| chr5_1 | exon | 13308935 | 13309372 | 13308935 | ID=Msa0718910-mRNA-1:exon:5439;Parent=Msa0718910-mRNA-1 |
| chr5_1 | five_prime_UTR | 13309277 | 13309372 | 13309277 | ID=Msa0718910-mRNA-1:five_prime_utr;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13308935 | 13309276 | 13308935 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13307216 | 13307330 | 13307216 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13307094 | 13307145 | 13307094 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13306622 | 13306949 | 13306622 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13305486 | 13305565 | 13305486 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13304822 | 13304869 | 13304822 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13303317 | 13303463 | 13303317 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13302288 | 13302360 | 13302288 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13302080 | 13302208 | 13302080 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| chr5_1 | CDS | 13301335 | 13301502 | 13301335 | ID=Msa0718910-mRNA-1:cds;Parent=Msa0718910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
