AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1044480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1044480 MtrunA17_Chr4g0074041 88.657 864 54 9 1 829 1 855 0.0 1501
Msa1044480 MtrunA17_Chr6g0458441 41.368 307 161 5 89 382 125 425 1.06e-69 243
Msa1044480 MtrunA17_Chr8g0366721 40.127 314 151 7 85 382 206 498 1.70e-69 239
Msa1044480 MtrunA17_Chr5g0411271 37.950 361 186 9 46 382 103 449 1.41e-67 238
Msa1044480 MtrunA17_Chr6g0458421 37.391 345 191 7 89 420 27 359 1.24e-66 232
Msa1044480 MtrunA17_Chr6g0458431 37.901 343 188 7 89 418 92 422 1.64e-66 234
Msa1044480 MtrunA17_Chr2g0313171 38.398 362 196 10 92 434 465 818 2.55e-62 227
Msa1044480 MtrunA17_Chr8g0365831 37.152 323 168 8 83 383 156 465 2.91e-62 219
Msa1044480 MtrunA17_Chr3g0133061 37.176 347 190 9 92 417 585 924 6.87e-62 227
Msa1044480 MtrunA17_Chr1g0150541 39.550 311 162 8 92 382 182 486 1.42e-60 220
Msa1044480 MtrunA17_Chr2g0312901 38.636 308 170 6 92 382 23 328 1.33e-59 214
Msa1044480 MtrunA17_Chr5g0427301 39.748 317 167 9 92 392 543 851 2.57e-58 216
Msa1044480 MtrunA17_Chr5g0412381 38.762 307 167 8 92 382 425 726 1.38e-57 213
Msa1044480 MtrunA17_Chr1g0149991 31.232 349 176 12 92 382 182 524 4.87e-40 156
Msa1044480 MtrunA17_Chr4g0062561 31.940 335 191 9 91 409 253 566 1.14e-39 158
Msa1044480 MtrunA17_Chr4g0062561 30.201 298 170 7 109 386 577 856 1.16e-30 129
Msa1044480 MtrunA17_Chr3g0123951 30.844 308 181 8 92 371 24 327 1.96e-34 135
Msa1044480 MtrunA17_Chr8g0382161 31.935 310 175 8 92 371 24 327 5.88e-34 134
Msa1044480 MtrunA17_Chr4g0062491 28.896 308 177 9 102 382 1 293 1.09e-28 117
Msa1044480 MtrunA17_Chr4g0064671 31.513 238 94 10 210 382 12 245 5.40e-25 105
Msa1044480 MtrunA17_Chr1g0148321 28.571 315 197 11 67 371 83 379 1.03e-21 101
Msa1044480 MtrunA17_Chr3g0138791 28.720 289 182 10 91 371 107 379 1.15e-20 98.2
Msa1044480 MtrunA17_Chr4g0020741 26.912 353 188 12 92 380 183 529 2.47e-19 92.4
Msa1044480 MtrunA17_Chr2g0322211 33.333 156 88 5 250 391 717 870 1.25e-14 78.2
Msa1044480 MtrunA17_Chr1g0189101 30.387 181 98 5 91 245 320 498 1.75e-11 68.2
Msa1044480 MtrunA17_Chr7g0267641 34.247 146 79 6 250 380 791 934 4.73e-11 66.6
Msa1044480 MtrunA17_Chr7g0255591 33.775 151 82 7 250 384 754 902 5.81e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1044480 AT5G57990.1 58.910 477 165 10 21 475 38 505 0.0 542
Msa1044480 AT2G24640.2 39.692 325 171 9 92 399 5 321 9.64e-62 217
Msa1044480 AT3G14400.1 39.634 328 173 9 87 391 18 343 5.33e-61 219
Msa1044480 AT2G24640.1 39.385 325 172 9 92 399 175 491 6.97e-60 216
Msa1044480 AT4G31670.1 39.482 309 165 8 92 382 169 473 1.70e-59 214
Msa1044480 AT1G17110.2 40.584 308 163 7 92 382 443 747 1.99e-57 213
Msa1044480 AT1G17110.3 40.584 308 163 7 92 382 439 743 2.06e-57 213
Msa1044480 AT1G17110.1 40.584 308 163 7 92 382 439 743 2.06e-57 213
Msa1044480 AT5G46740.1 37.821 312 174 5 89 383 161 469 9.20e-56 205
Msa1044480 AT4G17895.1 35.821 335 182 8 67 383 157 476 2.63e-55 203
Msa1044480 AT5G65450.1 38.312 308 170 9 92 383 330 633 4.03e-54 201
Msa1044480 AT5G65450.2 38.312 308 170 9 92 383 349 652 4.74e-54 201
Msa1044480 AT4G24560.1 37.013 308 173 8 92 382 543 846 1.16e-49 190
Msa1044480 AT5G46740.2 36.015 261 149 4 138 383 3 260 1.81e-40 157
Msa1044480 AT2G22310.1 31.270 307 180 9 92 371 24 326 2.44e-33 132
Msa1044480 AT4G39910.1 31.310 313 177 11 92 371 24 331 1.25e-32 130
Msa1044480 AT5G10790.2 27.671 365 180 13 92 383 49 402 4.30e-28 118
Msa1044480 AT2G22310.3 29.831 295 176 9 104 371 4 294 1.44e-27 115
Msa1044480 AT5G10790.1 27.671 365 180 13 92 383 178 531 3.92e-27 117
Msa1044480 AT2G22310.2 31.034 261 151 8 136 371 33 289 1.23e-26 112
Msa1044480 AT3G49600.3 28.374 289 182 9 91 371 106 377 2.15e-21 100
Msa1044480 AT3G49600.2 28.374 289 182 9 91 371 106 377 2.22e-21 100
Msa1044480 AT3G49600.1 28.374 289 182 9 91 371 106 377 2.22e-21 100
Msa1044480 AT3G11910.4 26.621 293 189 12 91 373 197 473 7.26e-18 89.4
Msa1044480 AT3G11910.2 26.621 293 189 12 91 373 197 473 7.26e-18 89.4
Msa1044480 AT3G11910.3 26.621 293 189 12 91 373 198 474 7.52e-18 89.4
Msa1044480 AT3G11910.1 26.621 293 189 12 91 373 198 474 7.52e-18 89.4
Msa1044480 AT5G06600.1 25.939 293 191 12 91 373 199 475 7.37e-17 86.3
Msa1044480 AT5G06600.2 25.939 293 191 12 91 373 198 474 7.69e-17 86.3
Msa1044480 AT5G06600.3 25.939 293 191 12 91 373 199 475 7.99e-17 85.9
Msa1044480 AT5G22030.2 35.135 148 79 6 250 382 765 910 2.28e-13 74.7
Msa1044480 AT5G22030.1 35.135 148 79 6 250 382 723 868 2.47e-13 74.7
Msa1044480 AT1G32850.1 26.971 241 142 7 37 245 241 479 1.10e-12 72.4
Msa1044480 AT2G40930.1 30.928 194 103 7 81 245 304 495 1.91e-12 71.6
Msa1044480 AT2G40930.2 30.928 194 103 7 81 245 304 495 1.91e-12 71.6
Msa1044480 AT2G32780.1 29.949 197 125 8 59 245 167 360 8.78e-12 69.7
Msa1044480 AT1G04860.1 27.111 225 154 6 25 243 163 383 2.28e-11 68.2

Find 170 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACGATTGGCTCAATTAA+AGG 0.195874 7_2:+2828958 None:intergenic
CCGAGAAATCTAAGTTAAAA+AGG 0.200867 7_2:-2826032 Msa1044480:CDS
GTTCGGAGGTGGTAGGGTTT+AGG 0.202661 7_2:+2833178 None:intergenic
TTCGGAGGTGGTAGGGTTTA+GGG 0.236829 7_2:+2833179 None:intergenic
TTCGATTTGAGAATTGAAAA+TGG 0.242796 7_2:+2833356 None:intergenic
TTTCACAGCTGCAGAACTTT+TGG 0.247142 7_2:-2831445 Msa1044480:CDS
TACGGGGTCCTGGTTCATTC+TGG 0.269868 7_2:-2831069 Msa1044480:CDS
AACAATGTCAGAAACTTTAA+TGG 0.270474 7_2:-2833310 Msa1044480:exon
CATAAATGCTGCCTGCCTTC+TGG 0.271427 7_2:-2831819 Msa1044480:CDS
GGTGCTGGGCTTTGGAATCT+TGG 0.293228 7_2:-2832883 Msa1044480:CDS
AATTCTGAATTCTCCGAGTT+TGG 0.298386 7_2:-2833105 Msa1044480:CDS
TGAAGCAGCCAACAAAATTT+AGG 0.319901 7_2:+2825888 None:intergenic
TCATCAGAGAAGAACGTAAA+TGG 0.320339 7_2:+2828290 None:intergenic
CATGTTTACCAGTAACTGTT+TGG 0.323728 7_2:+2828929 None:intergenic
AATATTATCGCCACAGGATA+TGG 0.329960 7_2:-2832556 Msa1044480:CDS
TCTTCCTTAGCGATATTAAC+AGG 0.334463 7_2:+2829420 None:intergenic
TCAAGTTCTGATTTAGCAAC+AGG 0.337395 7_2:+2829111 None:intergenic
ATGTTTACCAGTAACTGTTT+GGG 0.340036 7_2:+2828930 None:intergenic
AGTTTAGTTCATAAGATCTT+TGG 0.341062 7_2:-2831762 Msa1044480:CDS
CATCTTCCTGCCTAGCCTTT+CGG 0.341162 7_2:+2831877 None:intergenic
TTCAATTACCGATTCATAGA+AGG 0.341460 7_2:+2825661 None:intergenic
AATCTTTCAGTGCATTGGTT+GGG 0.341604 7_2:+2829355 None:intergenic
TTCACATATGATATCCTTGA+TGG 0.348753 7_2:+2829252 None:intergenic
ATTTCAAAGACTAATGTTAC+TGG 0.348939 7_2:-2829396 Msa1044480:CDS
AGTAATCCCCAAACAGTTAC+TGG 0.354666 7_2:-2828937 Msa1044480:CDS
GGTTTCGATGTGAAAATCAT+TGG 0.359886 7_2:+2833200 None:intergenic
ATGATTGATCCCTTGTACTT+TGG 0.360341 7_2:+2828475 None:intergenic
AAATGAATTGCTAGCACATA+AGG 0.368393 7_2:+2831342 None:intergenic
GATGTGAAATACTCGTTATA+CGG 0.368592 7_2:-2831087 Msa1044480:CDS
TTCAAAACATCTCCAGTGTT+TGG 0.369310 7_2:+2825918 None:intergenic
GTGTTGTTTGGTAATAGTTT+CGG 0.372171 7_2:+2833281 None:intergenic
TGAATTCTCCGAGTTTGGTT+TGG 0.374592 7_2:-2833100 Msa1044480:CDS
CTCCGAGTTTGGTTTGGATC+CGG 0.385695 7_2:-2833094 Msa1044480:CDS
GGAAGATGCACATGAGTATA+TGG 0.387695 7_2:-2831862 Msa1044480:CDS
ATATAACTTAACTCCAACTC+TGG 0.390379 7_2:-2825967 Msa1044480:exon
TCCCTACCAGTTCACACATT+TGG 0.392445 7_2:+2826223 None:intergenic
ATAATTTATTAAATCTTTCA+AGG 0.397473 7_2:-2825603 Msa1044480:three_prime_UTR
AGTGCATTGGTTGGGGTTGA+AGG 0.399113 7_2:+2829363 None:intergenic
GCGATATTAACAGGCTTCCT+TGG 0.401218 7_2:+2829429 None:intergenic
GGTTGGAACTTCAAATGGTT+TGG 0.404321 7_2:-2828611 Msa1044480:CDS
CAGGAAAGAGAAAGAAGTTA+AGG 0.405411 7_2:-2826104 Msa1044480:CDS
TGGTCCAACATCTGATGAAA+TGG 0.409259 7_2:+2828330 None:intergenic
AAAGGCAGATTCACTACAAA+AGG 0.410604 7_2:-2831478 Msa1044480:CDS
ATCTTTCAGTGCATTGGTTG+GGG 0.413722 7_2:+2829356 None:intergenic
AGCCGTGCCCTGCAAGCAAC+TGG 0.416890 7_2:-2832582 Msa1044480:CDS
TAAGAACGGATCAAATTTGT+TGG 0.418580 7_2:+2831521 None:intergenic
TTTGTTGGCTGCTTCATGTT+GGG 0.420084 7_2:-2825881 Msa1044480:three_prime_UTR
TGGTGGTCGTCTTCGAAGTC+AGG 0.420888 7_2:-2831742 Msa1044480:intron
ATCAAGAGTTGAGTCTTTCA+AGG 0.423114 7_2:+2828531 None:intergenic
ATATTCGTCCAGTTGCTTGC+AGG 0.423869 7_2:+2832574 None:intergenic
ATATTTATAGGCCACATTGC+TGG 0.423929 7_2:-2832639 Msa1044480:intron
AGGTGTTTGAAGCAGAGTTT+TGG 0.435782 7_2:-2826084 Msa1044480:CDS
GGAAACAAGTTGTCGGTGTT+CGG 0.437281 7_2:+2833161 None:intergenic
TGGATAATCTTTCAGTGCAT+TGG 0.438556 7_2:+2829350 None:intergenic
TTCTATGAATCGGTAATTGA+AGG 0.440974 7_2:-2825659 Msa1044480:three_prime_UTR
CTGAAGGAGAGATTATAAAC+AGG 0.443337 7_2:-2828258 Msa1044480:CDS
CTGAAATGGATCGTGTTGTT+TGG 0.444337 7_2:+2833269 None:intergenic
GAGTTAAGTTATATTCTGAA+TGG 0.447712 7_2:+2825976 None:intergenic
GCAACGGCATCAACTTCAGC+GGG 0.455516 7_2:+2828778 None:intergenic
GTATCCTCAGTAAACAGATT+AGG 0.458345 7_2:+2829006 None:intergenic
TCATTGGAAAAGCCTTTGAA+TGG 0.464047 7_2:+2833216 None:intergenic
ATTCATCTGTGTAAGTTCCT+TGG 0.467718 7_2:+2829149 None:intergenic
GTAGTCTACAAGATGATAAG+AGG 0.470662 7_2:-2828177 Msa1044480:CDS
ATCATATGTGAAGGATGCTC+TGG 0.470737 7_2:-2829241 Msa1044480:CDS
ATGTTGGGATCGAGCTATAG+AGG 0.471349 7_2:-2825866 Msa1044480:three_prime_UTR
GCACTGAAAGATTATCCAAA+TGG 0.475394 7_2:-2829345 Msa1044480:CDS
GTCCAGTTGCTTGCAGGGCA+CGG 0.477135 7_2:+2832580 None:intergenic
GTCGGTGTTCGGAGGTGGTA+GGG 0.479437 7_2:+2833172 None:intergenic
AAATGTTTAGTTGCACCAGC+TGG 0.481460 7_2:-2829036 Msa1044480:CDS
GAGGATTTCTGAGGCTAGAA+TGG 0.485733 7_2:+2825998 None:intergenic
TAATCTTTCAGTGCATTGGT+TGG 0.486650 7_2:+2829354 None:intergenic
ATCATCTTGTAGACTACATC+GGG 0.486691 7_2:+2828183 None:intergenic
CGCCTTTCGTTGAGATGCCT+AGG 0.489096 7_2:-2828436 Msa1044480:CDS
ATGTGAAATACTCGTTATAC+GGG 0.489190 7_2:-2831086 Msa1044480:CDS
CAAACAGCTAACAATTCATA+AGG 0.490192 7_2:-2831367 Msa1044480:CDS
ATTATTGATTTGCCAAACAC+TGG 0.490986 7_2:-2825930 Msa1044480:three_prime_UTR
TATTCGTCCAGTTGCTTGCA+GGG 0.491467 7_2:+2832575 None:intergenic
TGTCGGTGTTCGGAGGTGGT+AGG 0.494431 7_2:+2833171 None:intergenic
CAATTTCCGAAAGGCTAGGC+AGG 0.495854 7_2:-2831883 Msa1044480:CDS
GATGTTGGACCATCTATATC+CGG 0.498181 7_2:-2828319 Msa1044480:CDS
CTTGCCATTTCATCAGATGT+TGG 0.501211 7_2:-2828334 Msa1044480:CDS
TTAGTTCATAAGATCTTTGG+TGG 0.504698 7_2:-2831759 Msa1044480:CDS
GTTTGGGGATTACTGACGAT+TGG 0.506822 7_2:+2828946 None:intergenic
CTCCGGATCCAAACCAAACT+CGG 0.508386 7_2:+2833092 None:intergenic
TGTTAAATGCTGATCCATCA+AGG 0.509478 7_2:-2829266 Msa1044480:CDS
AGAGCATAACAGAGAAGCGA+AGG 0.512336 7_2:+2833402 None:intergenic
ATCTTTATGTTAGGGTCATG+AGG 0.515431 7_2:+2831306 None:intergenic
TTCTGAGTTTCTGCAGTCAA+AGG 0.516175 7_2:+2829294 None:intergenic
ACTTTGCAGATATGCAGCTA+AGG 0.517863 7_2:+2832810 None:intergenic
AAATAACATGTGGTATACCT+TGG 0.522653 7_2:-2831001 Msa1044480:CDS
ATACTCGTTATACGGGGTCC+TGG 0.528817 7_2:-2831079 Msa1044480:CDS
AGATTAGGTTTGTCTCCAGC+TGG 0.530309 7_2:+2829021 None:intergenic
TGCGGACATAGCAGTAATAG+TGG 0.532105 7_2:+2831028 None:intergenic
TGCAACGGCATCAACTTCAG+CGG 0.535551 7_2:+2828777 None:intergenic
TTAAGTTATATTCTGAATGG+AGG 0.536840 7_2:+2825979 None:intergenic
GAACGGATCAAATTTGTTGG+AGG 0.536981 7_2:+2831524 None:intergenic
TGAATTGAGAAATGTGCTAA+GGG 0.538276 7_2:+2825817 None:intergenic
GAGCTGCCAAATGTGTGAAC+TGG 0.539009 7_2:-2826229 Msa1044480:intron
CAGTACCCGGGTGTCATCCA+AGG 0.539523 7_2:+2830984 None:intergenic
CGTTGAGATGCCTAGGCCCG+CGG 0.545368 7_2:-2828429 Msa1044480:CDS
TTTATCTAAACGTACTTCCA+AGG 0.546275 7_2:-2829166 Msa1044480:CDS
CACCTCAATTTACAGGGATG+AGG 0.546911 7_2:-2826136 Msa1044480:intron
AAGTTGTCGGTGTTCGGAGG+TGG 0.550158 7_2:+2833167 None:intergenic
AAAGAAGTTTCCAAAGTACA+AGG 0.550879 7_2:-2828485 Msa1044480:CDS
GACTGAATCTTGAGCTGCAA+CGG 0.557353 7_2:+2828762 None:intergenic
ATGAATTGAGAAATGTGCTA+AGG 0.559134 7_2:+2825816 None:intergenic
AGATTATAAACAGGATGGAT+CGG 0.559141 7_2:-2828249 Msa1044480:CDS
TTATCATCCTTAGATCACTC+TGG 0.559615 7_2:-2829084 Msa1044480:CDS
GTAATTCCGAGGCTGAGCTC+CGG 0.562185 7_2:+2833075 None:intergenic
CTGCGATGATTGAATATTAG+CGG 0.564056 7_2:+2833140 None:intergenic
TTGGATCCGGAGCTCAGCCT+CGG 0.567233 7_2:-2833081 Msa1044480:CDS
TCAAGACTTAAATCTAAGAA+CGG 0.569509 7_2:+2831507 None:intergenic
CTGGTTCAGCAAAATAATAG+TGG 0.573221 7_2:-2829222 Msa1044480:CDS
GAAACACTTACCTCATCAGA+CGG 0.573882 7_2:+2828889 None:intergenic
TCTGGAAAAGACAATGTGGC+TGG 0.575944 7_2:-2829066 Msa1044480:CDS
ATCAAGGATATCATATGTGA+AGG 0.578215 7_2:-2829250 Msa1044480:CDS
CTTTGCAGATATGCAGCTAA+GGG 0.578834 7_2:+2832811 None:intergenic
AACACTCACTATTCTGCGAA+AGG 0.579080 7_2:+2833053 None:intergenic
AAATTACGTAAGATATCCAA+TGG 0.581979 7_2:+2825559 None:intergenic
TATAACTTAACTCCAACTCT+GGG 0.582591 7_2:-2825966 Msa1044480:exon
TTATCGCCACAGGATATGGT+TGG 0.582632 7_2:-2832552 Msa1044480:CDS
TACTAAAACCAGAATGAACC+AGG 0.585712 7_2:+2831061 None:intergenic
ACAAACTTGTCAGAGTGCGC+TGG 0.585740 7_2:-2828739 Msa1044480:CDS
AATTTGAAACCTTTCGTCAG+CGG 0.589809 7_2:-2831252 Msa1044480:CDS
GTTACAAAGAAACCCAGAGT+TGG 0.592564 7_2:+2825954 None:intergenic
TATTAGCGGAAACAAGTTGT+CGG 0.594262 7_2:+2833154 None:intergenic
TGTTGTGACTCGAGGTCTAG+AGG 0.594563 7_2:-2828137 Msa1044480:CDS
GGTATACCTTGGATGACACC+CGG 0.597085 7_2:-2830990 Msa1044480:CDS
TCTGCTTGCAACGTTGACAA+TGG 0.597440 7_2:+2831403 None:intergenic
TATCATCTTGTAGACTACAT+CGG 0.598160 7_2:+2828182 None:intergenic
AACAAGTTGTCGGTGTTCGG+AGG 0.599632 7_2:+2833164 None:intergenic
TCTTTATGTTAGGGTCATGA+GGG 0.602140 7_2:+2831307 None:intergenic
GAAGCCTGTTAATATCGCTA+AGG 0.602352 7_2:-2829424 Msa1044480:CDS
CAAGTTCTGATTTAGCAACA+GGG 0.602668 7_2:+2829112 None:intergenic
AGGAGAGATTATAAACAGGA+TGG 0.603417 7_2:-2828254 Msa1044480:CDS
TGGACGAATATTATCGCCAC+AGG 0.607344 7_2:-2832562 Msa1044480:CDS
TGCAGCTAAGGGCTCAGTGT+AGG 0.610444 7_2:+2832822 None:intergenic
GATTCACTCGGTACTCCAGA+AGG 0.612834 7_2:+2831804 None:intergenic
ACCACATGTTATTTGAAGTG+CGG 0.614693 7_2:+2831010 None:intergenic
CATAATACTGTTGTGACTCG+AGG 0.621809 7_2:-2828145 Msa1044480:CDS
CACGCAATTTCCGAAAGGCT+AGG 0.625284 7_2:-2831887 Msa1044480:CDS
TAGTCTACAAGATGATAAGA+GGG 0.626184 7_2:-2828176 Msa1044480:CDS
CATAACATCACCGTCTGATG+AGG 0.627169 7_2:-2828899 Msa1044480:intron
TGTTTACCAGTAACTGTTTG+GGG 0.629934 7_2:+2828931 None:intergenic
TTCTGAATGGAGGATTTCTG+AGG 0.631068 7_2:+2825989 None:intergenic
AGATTATCCAAATGGTCATG+TGG 0.631348 7_2:-2829337 Msa1044480:CDS
CTAGGCATCTCAACGAAAGG+CGG 0.637188 7_2:+2828437 None:intergenic
CTGATGAAGCATGATGCTGA+AGG 0.642291 7_2:-2828274 Msa1044480:CDS
TTAGCTGCATATCTGCAAAG+TGG 0.645703 7_2:-2832808 Msa1044480:CDS
GAGCATAACAGAGAAGCGAA+GGG 0.651721 7_2:+2833403 None:intergenic
AACGGCATCAACTTCAGCGG+GGG 0.652356 7_2:+2828780 None:intergenic
CGAGGTCTAGAGGAGACAGT+TGG 0.658287 7_2:-2828127 Msa1044480:intron
AGGGATGAGGAATATGACAC+AGG 0.660400 7_2:-2826123 Msa1044480:CDS
AGATTTCCAACCATATCCTG+TGG 0.661150 7_2:+2832546 None:intergenic
CATATCACGCAATTTCCGAA+AGG 0.662406 7_2:-2831892 Msa1044480:CDS
TCCGCACTTCAAATAACATG+TGG 0.663923 7_2:-2831011 Msa1044480:CDS
GTATACCTTGGATGACACCC+GGG 0.665022 7_2:-2830989 Msa1044480:intron
AGGATATGGTTGGAAATCTG+CGG 0.669968 7_2:-2832542 Msa1044480:CDS
AAAGCACCAGGTGATTCACT+CGG 0.673222 7_2:+2831792 None:intergenic
AAGAAGTTTCCAAAGTACAA+GGG 0.674699 7_2:-2828484 Msa1044480:CDS
GAATTGAGAAATGTGCTAAG+GGG 0.688139 7_2:+2825818 None:intergenic
TTCTGCGAAAGGTAATTCCG+AGG 0.688679 7_2:+2833064 None:intergenic
CAACGGCATCAACTTCAGCG+GGG 0.692880 7_2:+2828779 None:intergenic
GGAGTACCGAGTGAATCACC+TGG 0.694367 7_2:-2831798 Msa1044480:CDS
CAAACCTAATCTGTTTACTG+AGG 0.706880 7_2:-2829010 Msa1044480:CDS
GCGCACAAAATCCAGCAATG+TGG 0.709165 7_2:+2832628 None:intergenic
TCACTCTGGAAAAGACAATG+TGG 0.718425 7_2:-2829070 Msa1044480:CDS
GAAGAAATGAGTGTGCATTG+TGG 0.745593 7_2:+2833446 None:intergenic
GAAAGGTTTCAAATTCAGTG+CGG 0.748507 7_2:+2831260 None:intergenic
TGTGAAATACTCGTTATACG+GGG 0.780579 7_2:-2831085 Msa1044480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATATTATAATACAAATA+TGG + chr7_2:2826574-2826593 None:intergenic 10.0%
!! GTTATAAAAAAAAAACTTAT+TGG + chr7_2:2826676-2826695 None:intergenic 10.0%
!! TAAAAAAATTATAAAAAGCA+AGG + chr7_2:2829106-2829125 None:intergenic 10.0%
!! TTATATTGAAAAAATCAAAA+AGG - chr7_2:2829197-2829216 Msa1044480:CDS 10.0%
!!! AATTTTATTATTTTTGTTCT+AGG - chr7_2:2831006-2831025 Msa1044480:CDS 10.0%
!!! ATTTTATTATTTTTGTTCTA+GGG - chr7_2:2831007-2831026 Msa1044480:CDS 10.0%
!! ATAATTTATTAAATCTTTCA+AGG - chr7_2:2833435-2833454 Msa1044480:five_prime_UTR 10.0%
!!! AGATAATTTTACTTTTTCTA+AGG - chr7_2:2826891-2826910 Msa1044480:intron 15.0%
!! ATTGTTATCTTTGATATTTA+AGG - chr7_2:2827379-2827398 Msa1044480:intron 15.0%
!!! TTTAAGTCTTGAAATTTTAA+AGG - chr7_2:2827542-2827561 Msa1044480:intron 15.0%
!!! TCTTTTTAATCTTTATGTTA+GGG + chr7_2:2827743-2827762 None:intergenic 15.0%
!!! TTCTTTTTAATCTTTATGTT+AGG + chr7_2:2827744-2827763 None:intergenic 15.0%
!! TAAAGATTAAAAAGAAAGTT+CGG - chr7_2:2827748-2827767 Msa1044480:intron 15.0%
!!! GTAAATTATTTTATTTGACA+AGG + chr7_2:2827872-2827891 None:intergenic 15.0%
!! ACTAAAAAAAAATTCAAGAA+AGG + chr7_2:2828233-2828252 None:intergenic 15.0%
!! AAAAATAGACTAAAAACATT+CGG - chr7_2:2828341-2828360 Msa1044480:CDS 15.0%
!! TTAGAAATAGACTAAAAAAA+TGG - chr7_2:2828394-2828413 Msa1044480:CDS 15.0%
!! ATATTTCAAAACAAAATTGA+TGG - chr7_2:2829062-2829081 Msa1044480:CDS 15.0%
!! AAAATCAAAAAGGATAATTA+CGG - chr7_2:2829207-2829226 Msa1044480:CDS 15.0%
!!! TTTTATTTAATTATGTCACA+AGG + chr7_2:2831068-2831087 None:intergenic 15.0%
!!! AAGTAGTTTTATATTAATCA+AGG + chr7_2:2831386-2831405 None:intergenic 15.0%
!!! ATACCATCTTTTATAATTTT+GGG + chr7_2:2832051-2832070 None:intergenic 15.0%
!!! AATACCATCTTTTATAATTT+TGG + chr7_2:2832052-2832071 None:intergenic 15.0%
!!! ATTTTTTCAAAAGAACAATT+CGG + chr7_2:2832514-2832533 None:intergenic 15.0%
!!! GCATATTTTATTTATAAATC+TGG + chr7_2:2832753-2832772 None:intergenic 15.0%
!!! ATGAATTTAAAATTTTCCAT+TGG - chr7_2:2833463-2833482 Msa1044480:five_prime_UTR 15.0%
!!! TGTTTTTGAATTTGTTGTTT+CGG - chr7_2:2826021-2826040 Msa1044480:CDS 20.0%
!!! AAATTTGTTTTCACTTCATT+TGG - chr7_2:2826060-2826079 Msa1044480:CDS 20.0%
!!! TTCATTTGGATTAGTTAAAT+TGG - chr7_2:2826074-2826093 Msa1044480:CDS 20.0%
!!! AGATTTGATTGAAAATTTTC+AGG - chr7_2:2826133-2826152 Msa1044480:intron 20.0%
!!! GATTTGATTGAAAATTTTCA+GGG - chr7_2:2826134-2826153 Msa1044480:intron 20.0%
!! TGATTTATATTGATGAATGA+AGG - chr7_2:2826332-2826351 Msa1044480:intron 20.0%
!! TTTAAAAAAAACGCAACATA+AGG + chr7_2:2826527-2826546 None:intergenic 20.0%
!! TTAAATGAGTAATCAAATCA+AGG - chr7_2:2826542-2826561 Msa1044480:intron 20.0%
!! GATAACACTATAAAGATTAA+AGG + chr7_2:2828095-2828114 None:intergenic 20.0%
!!! TCTGTATTGATAATAATCAA+TGG - chr7_2:2828435-2828454 Msa1044480:CDS 20.0%
!! TATAATAATTACCATCTGAA+AGG + chr7_2:2829334-2829353 None:intergenic 20.0%
!! CTGTTACAACAATAAAAATA+GGG + chr7_2:2829508-2829527 None:intergenic 20.0%
!!! TTGACTCTACTTTTATTTTT+AGG - chr7_2:2830406-2830425 Msa1044480:intron 20.0%
!!! ATTTTCCTTTCAGATTTATT+TGG - chr7_2:2830950-2830969 Msa1044480:intron 20.0%
!! TGTGAAATCATTAATAGAAT+AGG + chr7_2:2831206-2831225 None:intergenic 20.0%
!!! AGTTTTATATTAATCAAGGA+TGG + chr7_2:2831382-2831401 None:intergenic 20.0%
!! TATAACATATATGTTCTCTT+TGG - chr7_2:2831508-2831527 Msa1044480:CDS 20.0%
!! ATAACATATATGTTCTCTTT+GGG - chr7_2:2831509-2831528 Msa1044480:CDS 20.0%
!!! ATCTTTTATAATTTTGGGTT+GGG + chr7_2:2832046-2832065 None:intergenic 20.0%
!! GGAAAAAATCTTAGAATATT+GGG + chr7_2:2832337-2832356 None:intergenic 20.0%
!! AGGAAAAAATCTTAGAATAT+TGG + chr7_2:2832338-2832357 None:intergenic 20.0%
!! TTCGATTTGAGAATTGAAAA+TGG + chr7_2:2825685-2825704 None:intergenic 25.0%
! AACAATGTCAGAAACTTTAA+TGG - chr7_2:2825728-2825747 Msa1044480:three_prime_UTR 25.0%
!!! AATTCGATTTTTCTCTGAAA+TGG + chr7_2:2825786-2825805 None:intergenic 25.0%
! ATCAAATCATCGACATAATA+TGG + chr7_2:2826304-2826323 None:intergenic 25.0%
! TGATGAATGAAGGAAATTTA+TGG - chr7_2:2826342-2826361 Msa1044480:intron 25.0%
! ATGAAAACAATTGTCAATAC+CGG + chr7_2:2826634-2826653 None:intergenic 25.0%
!!! GTATTGACAATTGTTTTCAT+GGG - chr7_2:2826634-2826653 Msa1044480:intron 25.0%
! AAAAAAAACTTATTGGTCGA+AGG + chr7_2:2826669-2826688 None:intergenic 25.0%
! AAAAATATAAGCCAAGAAGT+TGG + chr7_2:2826791-2826810 None:intergenic 25.0%
!! AACTTCTTGGCTTATATTTT+TGG - chr7_2:2826790-2826809 Msa1044480:intron 25.0%
!! ACTTCTTGGCTTATATTTTT+GGG - chr7_2:2826791-2826810 Msa1044480:intron 25.0%
!!! ACTTTTTCTAAGGTTTTTTG+AGG - chr7_2:2826901-2826920 Msa1044480:intron 25.0%
!! ATGCTTGATTTTGTTAGATA+AGG - chr7_2:2826979-2826998 Msa1044480:intron 25.0%
! AGTAACCAAGCTAATAAAAT+GGG + chr7_2:2827102-2827121 None:intergenic 25.0%
! AAGTAACCAAGCTAATAAAA+TGG + chr7_2:2827103-2827122 None:intergenic 25.0%
!! AGTTTAGTTCATAAGATCTT+TGG - chr7_2:2827276-2827295 Msa1044480:intron 25.0%
! TCAAGACTTAAATCTAAGAA+CGG + chr7_2:2827534-2827553 None:intergenic 25.0%
!!! TAGTCTATTTCTAATAACCA+AGG - chr7_2:2828249-2828268 Msa1044480:CDS 25.0%
! TAATAACCAAGGACTAAAAA+AGG - chr7_2:2828260-2828279 Msa1044480:CDS 25.0%
! AATAACCAAGGACTAAAAAA+GGG - chr7_2:2828261-2828280 Msa1044480:CDS 25.0%
!!! AGTCTATTTCTAATAACCAA+TGG + chr7_2:2828250-2828269 None:intergenic 25.0%
! TAGGTAGAAATTGAAAAAGA+GGG + chr7_2:2828628-2828647 None:intergenic 25.0%
!! TTTAGATGAAGTGTCAAAAA+GGG + chr7_2:2828736-2828755 None:intergenic 25.0%
! TGAAGTTGAAGTAAGATTAA+TGG - chr7_2:2828880-2828899 Msa1044480:intron 25.0%
! ATCATTTGCTTCACTTAAAT+CGG + chr7_2:2829155-2829174 None:intergenic 25.0%
! GCAAATGATACTAAATTGAT+AGG - chr7_2:2829166-2829185 Msa1044480:CDS 25.0%
!!! CGGTTTTTAAAGTAATGTAA+GGG + chr7_2:2829378-2829397 None:intergenic 25.0%
!! CCTTACATTACTTTAAAAAC+CGG - chr7_2:2829376-2829395 Msa1044480:CDS 25.0%
! GACTTAAAAATTTAGACATG+TGG - chr7_2:2829411-2829430 Msa1044480:CDS 25.0%
! CCTGTTACAACAATAAAAAT+AGG + chr7_2:2829509-2829528 None:intergenic 25.0%
!!! CCTATTTTTATTGTTGTAAC+AGG - chr7_2:2829506-2829525 Msa1044480:intron 25.0%
!!! ATAAAAAAAGTATTGCTCCA+AGG - chr7_2:2829592-2829611 Msa1044480:intron 25.0%
! ATTTCAAAGACTAATGTTAC+TGG - chr7_2:2829642-2829661 Msa1044480:intron 25.0%
!!! ATGTGGAAAATAAGTTTTGT+GGG - chr7_2:2829718-2829737 Msa1044480:intron 25.0%
!!! ATGATCAACAAATTTTGGTT+GGG + chr7_2:2830342-2830361 None:intergenic 25.0%
!!! TATGATCAACAAATTTTGGT+TGG + chr7_2:2830343-2830362 None:intergenic 25.0%
!! GTGATATGATCAACAAATTT+TGG + chr7_2:2830347-2830366 None:intergenic 25.0%
!!! CTCTACTTTTATTTTTAGGT+TGG - chr7_2:2830410-2830429 Msa1044480:intron 25.0%
! TCTTGTAGTGTTTAATTGTT+TGG - chr7_2:2831163-2831182 Msa1044480:intron 25.0%
!!! CTCAATATATATGGTTTTGT+TGG - chr7_2:2831636-2831655 Msa1044480:intron 25.0%
!!! CATCTTTTATAATTTTGGGT+TGG + chr7_2:2832047-2832066 None:intergenic 25.0%
! CAACCCAAAATTATAAAAGA+TGG - chr7_2:2832045-2832064 Msa1044480:intron 25.0%
! AAGCTTAATAAGCAATATAG+AGG + chr7_2:2832280-2832299 None:intergenic 25.0%
! CTATATTGCTTATTAAGCTT+TGG - chr7_2:2832280-2832299 Msa1044480:intron 25.0%
!!! GATTTTTTCCTTGTTTACTA+TGG - chr7_2:2832347-2832366 Msa1044480:intron 25.0%
! AATAACTTCCATAGTAAACA+AGG + chr7_2:2832358-2832377 None:intergenic 25.0%
!! TTTTTGTCTAAGAATCATTC+TGG - chr7_2:2832438-2832457 Msa1044480:intron 25.0%
! GCGATTTCTTGAAAAATATT+TGG + chr7_2:2832984-2833003 None:intergenic 25.0%
!!! CCTTTTTAACTTAGATTTCT+CGG + chr7_2:2833009-2833028 None:intergenic 25.0%
! CGAGAAATCTAAGTTAAAAA+GGG - chr7_2:2833007-2833026 Msa1044480:intron 25.0%
! TTAAGTTATATTCTGAATGG+AGG + chr7_2:2833062-2833081 None:intergenic 25.0%
! GAGTTAAGTTATATTCTGAA+TGG + chr7_2:2833065-2833084 None:intergenic 25.0%
!! TTTTTGTACCTTCTATGAAT+CGG - chr7_2:2833369-2833388 Msa1044480:five_prime_UTR 25.0%
! AAATTACGTAAGATATCCAA+TGG + chr7_2:2833482-2833501 None:intergenic 25.0%
!!! TAGCGTTTGTTTTTTCTTTG+CGG - chr7_2:2825548-2825567 Msa1044480:three_prime_UTR 30.0%
!! GTGTTGTTTGGTAATAGTTT+CGG + chr7_2:2825760-2825779 None:intergenic 30.0%
!!! CCTTTGAATGGTTTTTTAAC+AGG + chr7_2:2825813-2825832 None:intergenic 30.0%
CCTGTTAAAAAACCATTCAA+AGG - chr7_2:2825810-2825829 Msa1044480:three_prime_UTR 30.0%
!! AATTCAGAATTTTTGGAAGG+TGG + chr7_2:2825924-2825943 None:intergenic 30.0%
!! GAGAATTCAGAATTTTTGGA+AGG + chr7_2:2825927-2825946 None:intergenic 30.0%
!!! GGTATTGACAATTGTTTTCA+TGG - chr7_2:2826633-2826652 Msa1044480:intron 30.0%
! TCAGCTCAGTTTCTTTTAAA+CGG - chr7_2:2826841-2826860 Msa1044480:intron 30.0%
ATATGCCTAATCTTATGTCA+AGG + chr7_2:2827131-2827150 None:intergenic 30.0%
TTAGTTCATAAGATCTTTGG+TGG - chr7_2:2827279-2827298 Msa1044480:intron 30.0%
! TACTTGTTTCTTGATTCGAT+GGG - chr7_2:2827319-2827338 Msa1044480:intron 30.0%
! TTGATATTTAAGGCATTACC+TGG - chr7_2:2827389-2827408 Msa1044480:intron 30.0%
! TGATATTTAAGGCATTACCT+GGG - chr7_2:2827390-2827409 Msa1044480:intron 30.0%
!!! AAGAGTATCTTTTGACTTCA+TGG - chr7_2:2827427-2827446 Msa1044480:intron 30.0%
TAAGAACGGATCAAATTTGT+TGG + chr7_2:2827520-2827539 None:intergenic 30.0%
CAAACAGCTAACAATTCATA+AGG - chr7_2:2827671-2827690 Msa1044480:intron 30.0%
AAATGAATTGCTAGCACATA+AGG + chr7_2:2827699-2827718 None:intergenic 30.0%
! GTTTTGCAAGTAAAGAAAGT+GGG + chr7_2:2827850-2827869 None:intergenic 30.0%
GATGTGAAATACTCGTTATA+CGG - chr7_2:2827951-2827970 Msa1044480:intron 30.0%
ATGTGAAATACTCGTTATAC+GGG - chr7_2:2827952-2827971 Msa1044480:intron 30.0%
AAATAACATGTGGTATACCT+TGG - chr7_2:2828037-2828056 Msa1044480:intron 30.0%
AAAAATCAGTTAGCGTTATC+TGG - chr7_2:2828162-2828181 Msa1044480:CDS 30.0%
AGAACATTCATCAATACCAA+TGG + chr7_2:2828301-2828320 None:intergenic 30.0%
GTAGGTAGAAATTGAAAAAG+AGG + chr7_2:2828629-2828648 None:intergenic 30.0%
TTCAATTTCTACCTACTAAC+CGG - chr7_2:2828633-2828652 Msa1044480:intron 30.0%
! TTAGATGAAGTGTCAAAAAG+GGG + chr7_2:2828735-2828754 None:intergenic 30.0%
! GTTTAGATGAAGTGTCAAAA+AGG + chr7_2:2828737-2828756 None:intergenic 30.0%
AACATCTTTCTCCATTATTG+TGG - chr7_2:2828913-2828932 Msa1044480:CDS 30.0%
!!! GCATCACTTCAATTTTTTCT+GGG + chr7_2:2829040-2829059 None:intergenic 30.0%
!!! AGCATCACTTCAATTTTTTC+TGG + chr7_2:2829041-2829060 None:intergenic 30.0%
!!! CCGGTTTTTAAAGTAATGTA+AGG + chr7_2:2829379-2829398 None:intergenic 30.0%
! TTATTTTCCACATGACCATT+TGG + chr7_2:2829711-2829730 None:intergenic 30.0%
! CATGTGGAAAATAAGTTTTG+TGG - chr7_2:2829717-2829736 Msa1044480:intron 30.0%
!! TGTGGAAAATAAGTTTTGTG+GGG - chr7_2:2829719-2829738 Msa1044480:intron 30.0%
TTCACATATGATATCCTTGA+TGG + chr7_2:2829789-2829808 None:intergenic 30.0%
ATCAAGGATATCATATGTGA+AGG - chr7_2:2829788-2829807 Msa1044480:intron 30.0%
TTTATCTAAACGTACTTCCA+AGG - chr7_2:2829872-2829891 Msa1044480:intron 30.0%
!! TGAGGATACACTTTTAAAAG+AGG - chr7_2:2830046-2830065 Msa1044480:intron 30.0%
!! GAGGATACACTTTTAAAAGA+GGG - chr7_2:2830047-2830066 Msa1044480:intron 30.0%
ATGTTTACCAGTAACTGTTT+GGG + chr7_2:2830111-2830130 None:intergenic 30.0%
AAATATGTCAGTATCCTCTT+TGG - chr7_2:2830173-2830192 Msa1044480:intron 30.0%
GTCAATACACCAATACAATA+AGG + chr7_2:2830391-2830410 None:intergenic 30.0%
!!! TTTTAGGTTGGAACTTCAAA+TGG - chr7_2:2830422-2830441 Msa1044480:intron 30.0%
AAAGAAGTTTCCAAAGTACA+AGG - chr7_2:2830553-2830572 Msa1044480:intron 30.0%
AAGAAGTTTCCAAAGTACAA+GGG - chr7_2:2830554-2830573 Msa1044480:intron 30.0%
AGATTATAAACAGGATGGAT+CGG - chr7_2:2830789-2830808 Msa1044480:intron 30.0%
TATCATCTTGTAGACTACAT+CGG + chr7_2:2830859-2830878 None:intergenic 30.0%
TAGTCTACAAGATGATAAGA+GGG - chr7_2:2830862-2830881 Msa1044480:intron 30.0%
ATATTGACACAAACTCTATG+TGG + chr7_2:2830980-2830999 None:intergenic 30.0%
! ATTGTTTGGTTTAATGTCTC+TGG - chr7_2:2831177-2831196 Msa1044480:intron 30.0%
AATGGTGAGCTCAATATATA+TGG - chr7_2:2831627-2831646 Msa1044480:intron 30.0%
TGAAATTGTACTTGGCTTAT+TGG - chr7_2:2832585-2832604 Msa1044480:CDS 30.0%
GTTTGAAAGATGTTGAATGT+TGG - chr7_2:2832665-2832684 Msa1044480:intron 30.0%
CCGAGAAATCTAAGTTAAAA+AGG - chr7_2:2833006-2833025 Msa1044480:intron 30.0%
ATATAACTTAACTCCAACTC+TGG - chr7_2:2833071-2833090 Msa1044480:CDS 30.0%
TATAACTTAACTCCAACTCT+GGG - chr7_2:2833072-2833091 Msa1044480:CDS 30.0%
!! ATTATTGATTTGCCAAACAC+TGG - chr7_2:2833108-2833127 Msa1044480:CDS 30.0%
! GGTTTATTGTCTTTTATGCA+CGG - chr7_2:2833193-2833212 Msa1044480:CDS 30.0%
! GTTTATTGTCTTTTATGCAC+GGG - chr7_2:2833194-2833213 Msa1044480:CDS 30.0%
TGAATTGAGAAATGTGCTAA+GGG + chr7_2:2833224-2833243 None:intergenic 30.0%
ATGAATTGAGAAATGTGCTA+AGG + chr7_2:2833225-2833244 None:intergenic 30.0%
!! TTCAATTACCGATTCATAGA+AGG + chr7_2:2833380-2833399 None:intergenic 30.0%
TTCTATGAATCGGTAATTGA+AGG - chr7_2:2833379-2833398 Msa1044480:five_prime_UTR 30.0%
TCATTGGAAAAGCCTTTGAA+TGG + chr7_2:2825825-2825844 None:intergenic 35.0%
GGTTTCGATGTGAAAATCAT+TGG + chr7_2:2825841-2825860 None:intergenic 35.0%
TATTAGCGGAAACAAGTTGT+CGG + chr7_2:2825887-2825906 None:intergenic 35.0%
CTGCGATGATTGAATATTAG+CGG + chr7_2:2825901-2825920 None:intergenic 35.0%
! CTCGGAGAATTCAGAATTTT+TGG + chr7_2:2825931-2825950 None:intergenic 35.0%
AATTCTGAATTCTCCGAGTT+TGG - chr7_2:2825933-2825952 Msa1044480:three_prime_UTR 35.0%
!! ATTGAAAATTTTCAGGGTGC+TGG - chr7_2:2826140-2826159 Msa1044480:intron 35.0%
!! TTGAAAATTTTCAGGGTGCT+GGG - chr7_2:2826141-2826160 Msa1044480:intron 35.0%
ATATTTATAGGCCACATTGC+TGG - chr7_2:2826399-2826418 Msa1044480:intron 35.0%
AATATTATCGCCACAGGATA+TGG - chr7_2:2826482-2826501 Msa1044480:intron 35.0%
GCATTTATTACGTTGAGTCA+AGG - chr7_2:2826601-2826620 Msa1044480:intron 35.0%
TTACGTTGAGTCAAGGAAAA+TGG - chr7_2:2826608-2826627 Msa1044480:intron 35.0%
AGATCTTCTGCAAGATAATG+TGG + chr7_2:2826706-2826725 None:intergenic 35.0%
!!! TGCTGTCTGTTTTTGAAACA+AGG - chr7_2:2826751-2826770 Msa1044480:intron 35.0%
AAAAGAAACTGAGCTGAAAG+AGG + chr7_2:2826838-2826857 None:intergenic 35.0%
! CAGCTCAGTTTCTTTTAAAC+GGG - chr7_2:2826842-2826861 Msa1044480:intron 35.0%
TCCTGCTGTAATATCTAGAA+CGG - chr7_2:2826948-2826967 Msa1044480:intron 35.0%
!! TTAATCATGTGCTGATTGCT+TGG - chr7_2:2827021-2827040 Msa1044480:intron 35.0%
AAGTGCTTCTAGCAAAAAAC+GGG + chr7_2:2827079-2827098 None:intergenic 35.0%
! GAAGTGCTTCTAGCAAAAAA+CGG + chr7_2:2827080-2827099 None:intergenic 35.0%
! CACTTCCCATTTTATTAGCT+TGG - chr7_2:2827094-2827113 Msa1044480:intron 35.0%
GTACTCCTTGACATAAGATT+AGG - chr7_2:2827123-2827142 Msa1044480:intron 35.0%
! GTACTTGTTTCTTGATTCGA+TGG - chr7_2:2827318-2827337 Msa1044480:intron 35.0%
CTTGTTCTATAAAGATTCCC+AGG + chr7_2:2827410-2827429 None:intergenic 35.0%
ACAACACCTCAAAAGTTTGT+TGG - chr7_2:2827453-2827472 Msa1044480:intron 35.0%
! CAACACCTCAAAAGTTTGTT+GGG - chr7_2:2827454-2827473 Msa1044480:intron 35.0%
AAAGGCAGATTCACTACAAA+AGG - chr7_2:2827560-2827579 Msa1044480:intron 35.0%
TCTTTATGTTAGGGTCATGA+GGG + chr7_2:2827734-2827753 None:intergenic 35.0%
ATCTTTATGTTAGGGTCATG+AGG + chr7_2:2827735-2827754 None:intergenic 35.0%
GAAAGGTTTCAAATTCAGTG+CGG + chr7_2:2827781-2827800 None:intergenic 35.0%
! AATTTGAAACCTTTCGTCAG+CGG - chr7_2:2827786-2827805 Msa1044480:intron 35.0%
! GGTTTTGCAAGTAAAGAAAG+TGG + chr7_2:2827851-2827870 None:intergenic 35.0%
TGTGAAATACTCGTTATACG+GGG - chr7_2:2827953-2827972 Msa1044480:intron 35.0%
TACTAAAACCAGAATGAACC+AGG + chr7_2:2827980-2827999 None:intergenic 35.0%
! ACCACATGTTATTTGAAGTG+CGG + chr7_2:2828031-2828050 None:intergenic 35.0%
! TTAACGTATTTTCAGTACCC+GGG + chr7_2:2828069-2828088 None:intergenic 35.0%
! GTTAACGTATTTTCAGTACC+CGG + chr7_2:2828070-2828089 None:intergenic 35.0%
!! AACGCTAACTGATTTTTCTC+AGG + chr7_2:2828159-2828178 None:intergenic 35.0%
TTCTCTTCATTTATAAGCCC+CGG + chr7_2:2828188-2828207 None:intergenic 35.0%
!! TGGTATTGATGAATGTTCTG+TGG - chr7_2:2828302-2828321 Msa1044480:CDS 35.0%
TATTGATGAATGTTCTGTGG+AGG - chr7_2:2828305-2828324 Msa1044480:CDS 35.0%
ACTAAAAACATTCGGACTTG+AGG - chr7_2:2828349-2828368 Msa1044480:CDS 35.0%
CCACAGAACATTCATCAATA+CGG + chr7_2:2828305-2828324 None:intergenic 35.0%
TATTGATGAATGTTCTGTGG+AGG - chr7_2:2828305-2828324 Msa1044480:CDS 35.0%
TTTATGTCACAGCTGAAGTA+GGG + chr7_2:2828519-2828538 None:intergenic 35.0%
! TTTTATGTCACAGCTGAAGT+AGG + chr7_2:2828520-2828539 None:intergenic 35.0%
! AATCAATCTAGAGCAATGCT+AGG - chr7_2:2828546-2828565 Msa1044480:CDS 35.0%
! ATCAATCTAGAGCAATGCTA+GGG - chr7_2:2828547-2828566 Msa1044480:CDS 35.0%
ACAAACACTCTCTCAATCTA+TGG - chr7_2:2828592-2828611 Msa1044480:CDS 35.0%
AATTGAAAAAGAGGGAAACG+TGG + chr7_2:2828620-2828639 None:intergenic 35.0%
! TAGATGAAGTGTCAAAAAGG+GGG + chr7_2:2828734-2828753 None:intergenic 35.0%
ACACTTCATCTAAACAACCA+CGG - chr7_2:2828742-2828761 Msa1044480:CDS 35.0%
TAGATCGAGAACCACAATAA+TGG + chr7_2:2828927-2828946 None:intergenic 35.0%
TGGTTCTCGATCTACTTTAA+TGG - chr7_2:2828933-2828952 Msa1044480:CDS 35.0%
TCCACCACAAACAAAGAATT+TGG + chr7_2:2828972-2828991 None:intergenic 35.0%
!!! CAATTTTTTCTGGGTTGTAC+TGG + chr7_2:2829031-2829050 None:intergenic 35.0%
! TGGCTTTTGTGTATGGAAAA+AGG + chr7_2:2829264-2829283 None:intergenic 35.0%
! ATCTCAATGGCTTTTGTGTA+TGG + chr7_2:2829271-2829290 None:intergenic 35.0%
TAAAAACCGGTAAACAAGTG+AGG - chr7_2:2829389-2829408 Msa1044480:CDS 35.0%
TTAAGTCCTCACTTGTTTAC+CGG + chr7_2:2829398-2829417 None:intergenic 35.0%
TAGATTGATGAGCAATGCTA+TGG + chr7_2:2829484-2829503 None:intergenic 35.0%
TTGTAACAGGTAAGTCATGT+CGG - chr7_2:2829519-2829538 Msa1044480:intron 35.0%
TCTTCCTTAGCGATATTAAC+AGG + chr7_2:2829621-2829640 None:intergenic 35.0%
!! AATCTTTCAGTGCATTGGTT+GGG + chr7_2:2829686-2829705 None:intergenic 35.0%
! TAATCTTTCAGTGCATTGGT+TGG + chr7_2:2829687-2829706 None:intergenic 35.0%
TGGATAATCTTTCAGTGCAT+TGG + chr7_2:2829691-2829710 None:intergenic 35.0%
GCACTGAAAGATTATCCAAA+TGG - chr7_2:2829693-2829712 Msa1044480:intron 35.0%
AGATTATCCAAATGGTCATG+TGG - chr7_2:2829701-2829720 Msa1044480:intron 35.0%
TGTTAAATGCTGATCCATCA+AGG - chr7_2:2829772-2829791 Msa1044480:intron 35.0%
CTGGTTCAGCAAAATAATAG+TGG - chr7_2:2829816-2829835 Msa1044480:intron 35.0%
ATTCATCTGTGTAAGTTCCT+TGG + chr7_2:2829892-2829911 None:intergenic 35.0%
! CAAGTTCTGATTTAGCAACA+GGG + chr7_2:2829929-2829948 None:intergenic 35.0%
! TCAAGTTCTGATTTAGCAAC+AGG + chr7_2:2829930-2829949 None:intergenic 35.0%
TTATCATCCTTAGATCACTC+TGG - chr7_2:2829954-2829973 Msa1044480:intron 35.0%
CAAACCTAATCTGTTTACTG+AGG - chr7_2:2830028-2830047 Msa1044480:intron 35.0%
GTATCCTCAGTAAACAGATT+AGG + chr7_2:2830035-2830054 None:intergenic 35.0%
TGTTTACCAGTAACTGTTTG+GGG + chr7_2:2830110-2830129 None:intergenic 35.0%
CATGTTTACCAGTAACTGTT+TGG + chr7_2:2830112-2830131 None:intergenic 35.0%
GTTGGGTTACTGAAATTACA+AGG + chr7_2:2830325-2830344 None:intergenic 35.0%
ACAATAAGGCCCCAATATAT+GGG + chr7_2:2830377-2830396 None:intergenic 35.0%
TACAATAAGGCCCCAATATA+TGG + chr7_2:2830378-2830397 None:intergenic 35.0%
!! ATATTGGGGCCTTATTGTAT+TGG - chr7_2:2830379-2830398 Msa1044480:intron 35.0%
ATCAAGAGTTGAGTCTTTCA+AGG + chr7_2:2830510-2830529 None:intergenic 35.0%
ATGATTGATCCCTTGTACTT+TGG + chr7_2:2830566-2830585 None:intergenic 35.0%
! TTTTTGTGATTCTTCTTCCG+CGG + chr7_2:2830629-2830648 None:intergenic 35.0%
AAAAAATAGACGCTGCTTGT+TGG - chr7_2:2830646-2830665 Msa1044480:intron 35.0%
AAAAATAGACGCTGCTTGTT+GGG - chr7_2:2830647-2830666 Msa1044480:intron 35.0%
! AGAACGTAAATGGTCTTTTC+CGG + chr7_2:2830741-2830760 None:intergenic 35.0%
TCATCAGAGAAGAACGTAAA+TGG + chr7_2:2830751-2830770 None:intergenic 35.0%
CTGAAGGAGAGATTATAAAC+AGG - chr7_2:2830780-2830799 Msa1044480:intron 35.0%
AGGAGAGATTATAAACAGGA+TGG - chr7_2:2830784-2830803 Msa1044480:intron 35.0%
ATCATCTTGTAGACTACATC+GGG + chr7_2:2830858-2830877 None:intergenic 35.0%
GTAGTCTACAAGATGATAAG+AGG - chr7_2:2830861-2830880 Msa1044480:intron 35.0%
GTGTGCCAAATAAATCTGAA+AGG + chr7_2:2830958-2830977 None:intergenic 35.0%
TTGCTAATTGCCAAATTCCT+TGG - chr7_2:2831229-2831248 Msa1044480:intron 35.0%
TGCTAATTGCCAAATTCCTT+GGG - chr7_2:2831230-2831249 Msa1044480:intron 35.0%
!! CCATTTTAACCCAAGGAATT+TGG + chr7_2:2831242-2831261 None:intergenic 35.0%
CCAAATTCCTTGGGTTAAAA+TGG - chr7_2:2831239-2831258 Msa1044480:intron 35.0%
!! AATAGCACCATTTTAACCCA+AGG + chr7_2:2831249-2831268 None:intergenic 35.0%
ACCACACAAAAAGTAGTATC+TGG - chr7_2:2831272-2831291 Msa1044480:CDS 35.0%
!!! ACCAGATACTACTTTTTGTG+TGG + chr7_2:2831276-2831295 None:intergenic 35.0%
CTGAACTGAACTCTGAATAT+TGG - chr7_2:2831468-2831487 Msa1044480:CDS 35.0%
!! TTCATTGTGTTGGTTGTGAA+GGG - chr7_2:2831737-2831756 Msa1044480:intron 35.0%
TGTGTAGTGCTTATAAAGCT+TGG - chr7_2:2831796-2831815 Msa1044480:CDS 35.0%
GTGTAGTGCTTATAAAGCTT+GGG - chr7_2:2831797-2831816 Msa1044480:CDS 35.0%
!! TTCATTGTGTTGGTTGTGAA+GGG - chr7_2:2831737-2831756 Msa1044480:intron 35.0%
TGTGTAGTGCTTATAAAGCT+TGG - chr7_2:2831796-2831815 Msa1044480:CDS 35.0%
GTGTAGTGCTTATAAAGCTT+GGG - chr7_2:2831797-2831816 Msa1044480:CDS 35.0%
! AAAACTTGCTTGTAAGGTGA+GGG + chr7_2:2832007-2832026 None:intergenic 35.0%
GCAACTTAAAACCGCAATTA+GGG + chr7_2:2832184-2832203 None:intergenic 35.0%
TCTAAGAATCATTCTGGATC+CGG - chr7_2:2832444-2832463 Msa1044480:intron 35.0%
GATACGCTATTGATGTGTAT+CGG - chr7_2:2832480-2832499 Msa1044480:intron 35.0%
! GCTGAATCTGAAATTGTACT+TGG - chr7_2:2832577-2832596 Msa1044480:CDS 35.0%
ATCTTGACACCTCAATTTAC+AGG - chr7_2:2832895-2832914 Msa1044480:intron 35.0%
TCTTGACACCTCAATTTACA+GGG - chr7_2:2832896-2832915 Msa1044480:intron 35.0%
CAGGAAAGAGAAAGAAGTTA+AGG - chr7_2:2832934-2832953 Msa1044480:intron 35.0%
TTCAAAACATCTCCAGTGTT+TGG + chr7_2:2833123-2833142 None:intergenic 35.0%
!!! AGAGAGCACCTAAATTTTGT+TGG - chr7_2:2833142-2833161 Msa1044480:CDS 35.0%
TGAAGCAGCCAACAAAATTT+AGG + chr7_2:2833153-2833172 None:intergenic 35.0%
GAATTGAGAAATGTGCTAAG+GGG + chr7_2:2833223-2833242 None:intergenic 35.0%
!!! TTTTTTCTTTGCGGCAGTGT+AGG - chr7_2:2825557-2825576 Msa1044480:three_prime_UTR 40.0%
! TTTTTCTTTGCGGCAGTGTA+GGG - chr7_2:2825558-2825577 Msa1044480:three_prime_UTR 40.0%
GAAGAAATGAGTGTGCATTG+TGG + chr7_2:2825595-2825614 None:intergenic 40.0%
! CTGAAATGGATCGTGTTGTT+TGG + chr7_2:2825772-2825791 None:intergenic 40.0%
TGAATTCTCCGAGTTTGGTT+TGG - chr7_2:2825938-2825957 Msa1044480:three_prime_UTR 40.0%
AACACTCACTATTCTGCGAA+AGG + chr7_2:2825988-2826007 None:intergenic 40.0%
CTTTGCAGATATGCAGCTAA+GGG + chr7_2:2826230-2826249 None:intergenic 40.0%
ACTTTGCAGATATGCAGCTA+AGG + chr7_2:2826231-2826250 None:intergenic 40.0%
TTAGCTGCATATCTGCAAAG+TGG - chr7_2:2826230-2826249 Msa1044480:CDS 40.0%
AGATTTCCAACCATATCCTG+TGG + chr7_2:2826495-2826514 None:intergenic 40.0%
AGGATATGGTTGGAAATCTG+CGG - chr7_2:2826496-2826515 Msa1044480:intron 40.0%
TGCAAGATAATGTGGACATG+CGG + chr7_2:2826698-2826717 None:intergenic 40.0%
TAAGCCTAGAACCAACTTCT+TGG - chr7_2:2826777-2826796 Msa1044480:intron 40.0%
! TAAGCCAAGAAGTTGGTTCT+AGG + chr7_2:2826784-2826803 None:intergenic 40.0%
! ACCGTTCTAGATATTACAGC+AGG + chr7_2:2826952-2826971 None:intergenic 40.0%
AGTGCTTCTAGCAAAAAACG+GGG + chr7_2:2827078-2827097 None:intergenic 40.0%
CATATCACGCAATTTCCGAA+AGG - chr7_2:2827146-2827165 Msa1044480:intron 40.0%
GGAAGATGCACATGAGTATA+TGG - chr7_2:2827176-2827195 Msa1044480:intron 40.0%
!!! AAACTTTTCTCGAAAGCACC+AGG + chr7_2:2827261-2827280 None:intergenic 40.0%
! AAGCACCCAACAAACTTTTG+AGG + chr7_2:2827462-2827481 None:intergenic 40.0%
!!! GTTTGTTGGGTGCTTTTTTC+AGG - chr7_2:2827467-2827486 Msa1044480:intron 40.0%
!! GAACGGATCAAATTTGTTGG+AGG + chr7_2:2827517-2827536 None:intergenic 40.0%
! TTTCACAGCTGCAGAACTTT+TGG - chr7_2:2827593-2827612 Msa1044480:intron 40.0%
!! ACTTTCAAGTTTCTCCCGTT+TGG - chr7_2:2827919-2827938 Msa1044480:intron 40.0%
!!! TCTGGTTTTAGTACTCACTC+TGG - chr7_2:2827987-2828006 Msa1044480:intron 40.0%
TCCGCACTTCAAATAACATG+TGG - chr7_2:2828027-2828046 Msa1044480:intron 40.0%
AACCAAGGACTAAAAAAGGG+TGG - chr7_2:2828264-2828283 Msa1044480:CDS 40.0%
!!! TTCCACCCTTTTTTAGTCCT+TGG + chr7_2:2828269-2828288 None:intergenic 40.0%
ATGAATGTTCTGTGGAGGAA+TGG - chr7_2:2828310-2828329 Msa1044480:CDS 40.0%
AAAACATTCGGACTTGAGGT+TGG - chr7_2:2828353-2828372 Msa1044480:CDS 40.0%
! CCGTATTGATGAATGTTCTG+TGG - chr7_2:2828461-2828480 Msa1044480:CDS 40.0%
ATGAATGTTCTGTGGAGGAA+TGG - chr7_2:2828310-2828329 Msa1044480:CDS 40.0%
GTTTCTTAAAACCAGACCCT+AGG - chr7_2:2828491-2828510 Msa1044480:CDS 40.0%
CAAACAAAGAATTTGGCTGG+CGG + chr7_2:2828965-2828984 None:intergenic 40.0%
CCACAAACAAAGAATTTGGC+TGG + chr7_2:2828968-2828987 None:intergenic 40.0%
! CCAGCCAAATTCTTTGTTTG+TGG - chr7_2:2828965-2828984 Msa1044480:CDS 40.0%
! GCCAAATTCTTTGTTTGTGG+TGG - chr7_2:2828968-2828987 Msa1044480:CDS 40.0%
!! TTTTTCTGGGTTGTACTGGT+GGG + chr7_2:2829027-2829046 None:intergenic 40.0%
!!! TTTTTTCTGGGTTGTACTGG+TGG + chr7_2:2829028-2829047 None:intergenic 40.0%
GACTTGTCAGTTGTCATCAT+CGG + chr7_2:2829133-2829152 None:intergenic 40.0%
ACGGAAGTGAGATTTGTACA+TGG - chr7_2:2829226-2829245 Msa1044480:CDS 40.0%
GAAGTGAGATTTGTACATGG+CGG - chr7_2:2829229-2829248 Msa1044480:CDS 40.0%
GAAGCCTGTTAATATCGCTA+AGG - chr7_2:2829614-2829633 Msa1044480:intron 40.0%
!! ATCTTTCAGTGCATTGGTTG+GGG + chr7_2:2829685-2829704 None:intergenic 40.0%
TTCTGAGTTTCTGCAGTCAA+AGG + chr7_2:2829747-2829766 None:intergenic 40.0%
ATCATATGTGAAGGATGCTC+TGG - chr7_2:2829797-2829816 Msa1044480:intron 40.0%
! GTCTTTTCCAGAGTGATCTA+AGG + chr7_2:2829964-2829983 None:intergenic 40.0%
! TCACTCTGGAAAAGACAATG+TGG - chr7_2:2829968-2829987 Msa1044480:intron 40.0%
AAATGTTTAGTTGCACCAGC+TGG - chr7_2:2830002-2830021 Msa1044480:intron 40.0%
! CTGACGATTGGCTCAATTAA+AGG + chr7_2:2830083-2830102 None:intergenic 40.0%
AGTAATCCCCAAACAGTTAC+TGG - chr7_2:2830101-2830120 Msa1044480:intron 40.0%
GAAACACTTACCTCATCAGA+CGG + chr7_2:2830152-2830171 None:intergenic 40.0%
GTATCCTCTTTGGACAAAAC+TGG - chr7_2:2830183-2830202 Msa1044480:intron 40.0%
TCACCTGTTTGCCCATATAT+TGG - chr7_2:2830363-2830382 Msa1044480:intron 40.0%
CACCTGTTTGCCCATATATT+GGG - chr7_2:2830364-2830383 Msa1044480:intron 40.0%
ACCTGTTTGCCCATATATTG+GGG - chr7_2:2830365-2830384 Msa1044480:intron 40.0%
GGTTGGAACTTCAAATGGTT+TGG - chr7_2:2830427-2830446 Msa1044480:intron 40.0%
! TTTTGTGATTCTTCTTCCGC+GGG + chr7_2:2830628-2830647 None:intergenic 40.0%
! CTTGCCATTTCATCAGATGT+TGG - chr7_2:2830704-2830723 Msa1044480:intron 40.0%
TGGTCCAACATCTGATGAAA+TGG + chr7_2:2830711-2830730 None:intergenic 40.0%
GATGTTGGACCATCTATATC+CGG - chr7_2:2830719-2830738 Msa1044480:intron 40.0%
! TGGTCTTTTCCGGATATAGA+TGG + chr7_2:2830731-2830750 None:intergenic 40.0%
CATAATACTGTTGTGACTCG+AGG - chr7_2:2830893-2830912 Msa1044480:intron 40.0%
ATTGCTCGCATTGGATATGT+TGG - chr7_2:2831599-2831618 Msa1044480:intron 40.0%
TTGCTCGCATTGGATATGTT+GGG - chr7_2:2831600-2831619 Msa1044480:intron 40.0%
TTGGATATGTTGGGGATGAA+TGG - chr7_2:2831609-2831628 Msa1044480:intron 40.0%
! TGGAAGTTTCACATCGATTG+TGG - chr7_2:2831656-2831675 Msa1044480:intron 40.0%
AACACAAAAGCCACATTAGG+CGG + chr7_2:2831693-2831712 None:intergenic 40.0%
AGCAACACAAAAGCCACATT+AGG + chr7_2:2831696-2831715 None:intergenic 40.0%
! AACCAACACAATGAAGGTGT+TGG + chr7_2:2831732-2831751 None:intergenic 40.0%
CTTCACAACCAACACAATGA+AGG + chr7_2:2831738-2831757 None:intergenic 40.0%
!! CTTCATTGTGTTGGTTGTGA+AGG - chr7_2:2831736-2831755 Msa1044480:intron 40.0%
GAACTTCCAACAAAAGGTGA+GGG + chr7_2:2831826-2831845 None:intergenic 40.0%
GATGTGGAACTTCCAACAAA+AGG + chr7_2:2831832-2831851 None:intergenic 40.0%
AACACAAAAGCCACATTAGG+CGG + chr7_2:2831693-2831712 None:intergenic 40.0%
AGCAACACAAAAGCCACATT+AGG + chr7_2:2831696-2831715 None:intergenic 40.0%
! AACCAACACAATGAAGGTGT+TGG + chr7_2:2831732-2831751 None:intergenic 40.0%
CTTCACAACCAACACAATGA+AGG + chr7_2:2831738-2831757 None:intergenic 40.0%
!! CTTCATTGTGTTGGTTGTGA+AGG - chr7_2:2831736-2831755 Msa1044480:intron 40.0%
! CAAAACTTGCTTGTAAGGTG+AGG + chr7_2:2832008-2832027 None:intergenic 40.0%
!! GCCTATCCTAGATTTGTTGT+TGG - chr7_2:2832075-2832094 Msa1044480:intron 40.0%
! GCCAACAACAAATCTAGGAT+AGG + chr7_2:2832079-2832098 None:intergenic 40.0%
GTAAGGCCAACAACAAATCT+AGG + chr7_2:2832084-2832103 None:intergenic 40.0%
!! AAAGCATGGATGATGGAGTA+AGG + chr7_2:2832101-2832120 None:intergenic 40.0%
TACTCCATCATCCATGCTTT+AGG - chr7_2:2832101-2832120 Msa1044480:intron 40.0%
! ATCCATGCTTTAGGCTCATT+GGG - chr7_2:2832110-2832129 Msa1044480:intron 40.0%
GGCAACTTAAAACCGCAATT+AGG + chr7_2:2832185-2832204 None:intergenic 40.0%
TTTAGTCCCACATTGCGATA+TGG - chr7_2:2832254-2832273 Msa1044480:intron 40.0%
TATCAGTACTTCGACTACAC+AGG + chr7_2:2832413-2832432 None:intergenic 40.0%
CGTATCTCAACATATCACTC+CGG + chr7_2:2832466-2832485 None:intergenic 40.0%
TAAAAATGCGTCCAGCATGT+CGG - chr7_2:2832538-2832557 Msa1044480:intron 40.0%
CAGAAAGATGCATTGCCTAA+TGG + chr7_2:2832716-2832735 None:intergenic 40.0%
TTCCTCATCCCTGTAAATTG+AGG + chr7_2:2832907-2832926 None:intergenic 40.0%
!! AGGTGTTTGAAGCAGAGTTT+TGG - chr7_2:2832954-2832973 Msa1044480:intron 40.0%
!! TGTTTGAAGCAGAGTTTTGG+TGG - chr7_2:2832957-2832976 Msa1044480:intron 40.0%
!! GTTTGAAGCAGAGTTTTGGT+GGG - chr7_2:2832958-2832977 Msa1044480:intron 40.0%
TTCTGAATGGAGGATTTCTG+AGG + chr7_2:2833052-2833071 None:intergenic 40.0%
GTTACAAAGAAACCCAGAGT+TGG + chr7_2:2833087-2833106 None:intergenic 40.0%
!! TTTTGTTGGCTGCTTCATGT+TGG - chr7_2:2833156-2833175 Msa1044480:CDS 40.0%
! TTTGTTGGCTGCTTCATGTT+GGG - chr7_2:2833157-2833176 Msa1044480:CDS 40.0%
GAGCATAACAGAGAAGCGAA+GGG + chr7_2:2825638-2825657 None:intergenic 45.0%
AGAGCATAACAGAGAAGCGA+AGG + chr7_2:2825639-2825658 None:intergenic 45.0%
! GGAAACAAGTTGTCGGTGTT+CGG + chr7_2:2825880-2825899 None:intergenic 45.0%
TTCTGCGAAAGGTAATTCCG+AGG + chr7_2:2825977-2825996 None:intergenic 45.0%
TATTCGTCCAGTTGCTTGCA+GGG + chr7_2:2826466-2826485 None:intergenic 45.0%
ATATTCGTCCAGTTGCTTGC+AGG + chr7_2:2826467-2826486 None:intergenic 45.0%
TGGACGAATATTATCGCCAC+AGG - chr7_2:2826476-2826495 Msa1044480:intron 45.0%
TTATCGCCACAGGATATGGT+TGG - chr7_2:2826486-2826505 Msa1044480:intron 45.0%
GTTGAGTCAAGGAAAATGGC+CGG - chr7_2:2826612-2826631 Msa1044480:intron 45.0%
! AAAGCACCAGGTGATTCACT+CGG + chr7_2:2827249-2827268 None:intergenic 45.0%
! ACAGCTGCAGAACTTTTGGA+TGG - chr7_2:2827597-2827616 Msa1044480:intron 45.0%
TCTGCTTGCAACGTTGACAA+TGG + chr7_2:2827638-2827657 None:intergenic 45.0%
TGCGGACATAGCAGTAATAG+TGG + chr7_2:2828013-2828032 None:intergenic 45.0%
ATCAGTTAGCGTTATCTGGC+CGG - chr7_2:2828166-2828185 Msa1044480:CDS 45.0%
GGTGGAACAGTAGTAACCAT+TGG - chr7_2:2828282-2828301 Msa1044480:CDS 45.0%
GAGGTTGGAACAGTAACCAT+TGG - chr7_2:2828368-2828387 Msa1044480:CDS 45.0%
AGTATCTCAACCTGCTGAAC+CGG + chr7_2:2828655-2828674 None:intergenic 45.0%
CTTCATCTAAACAACCACGG+CGG - chr7_2:2828745-2828764 Msa1044480:CDS 45.0%
CTCATCACTCTTGTCTTCTC+CGG + chr7_2:2828788-2828807 None:intergenic 45.0%
GAGAAGACAAGAGTGATGAG+AGG - chr7_2:2828788-2828807 Msa1044480:CDS 45.0%
AAGACAAGAGTGATGAGAGG+AGG - chr7_2:2828791-2828810 Msa1044480:intron 45.0%
AGACAAGAGTGATGAGAGGA+GGG - chr7_2:2828792-2828811 Msa1044480:intron 45.0%
GCAGTCATGGAAAATGGTGA+TGG - chr7_2:2828840-2828859 Msa1044480:intron 45.0%
!! TCATGGAAAATGGTGATGGC+AGG - chr7_2:2828844-2828863 Msa1044480:intron 45.0%
!! CATGGAAAATGGTGATGGCA+GGG - chr7_2:2828845-2828864 Msa1044480:intron 45.0%
AGATTTGTACATGGCGGTTG+TGG - chr7_2:2829235-2829254 Msa1044480:CDS 45.0%
GCCATTGAGATTGTAGACGA+CGG - chr7_2:2829280-2829299 Msa1044480:CDS 45.0%
CTGAAAGGTCAGTTCGCAAA+CGG + chr7_2:2829319-2829338 None:intergenic 45.0%
TTGCGAACTGACCTTTCAGA+TGG - chr7_2:2829320-2829339 Msa1044480:CDS 45.0%
ACAAGCACTCTCCATGTGTA+TGG + chr7_2:2829439-2829458 None:intergenic 45.0%
GCGATATTAACAGGCTTCCT+TGG + chr7_2:2829612-2829631 None:intergenic 45.0%
TCTGGAAAAGACAATGTGGC+TGG - chr7_2:2829972-2829991 Msa1044480:intron 45.0%
AGATTAGGTTTGTCTCCAGC+TGG + chr7_2:2830020-2830039 None:intergenic 45.0%
GTTTGGGGATTACTGACGAT+TGG + chr7_2:2830095-2830114 None:intergenic 45.0%
CATAACATCACCGTCTGATG+AGG - chr7_2:2830139-2830158 Msa1044480:intron 45.0%
!! AGCACCAGTTTTGTCCAAAG+AGG + chr7_2:2830190-2830209 None:intergenic 45.0%
! TTCAGCGGGGGAATTTTTCT+GGG + chr7_2:2830249-2830268 None:intergenic 45.0%
GACTGAATCTTGAGCTGCAA+CGG + chr7_2:2830279-2830298 None:intergenic 45.0%
CTGATGAAGCATGATGCTGA+AGG - chr7_2:2830764-2830783 Msa1044480:intron 45.0%
TGTGGAGTTACCTTCATCTC+AGG - chr7_2:2831553-2831572 Msa1044480:intron 45.0%
GTTACCTTCATCTCAGGTCT+TGG - chr7_2:2831559-2831578 Msa1044480:intron 45.0%
CATATCCAATGCGAGCAATC+TGG + chr7_2:2831598-2831617 None:intergenic 45.0%
TGCTCGCATTGGATATGTTG+GGG - chr7_2:2831601-2831620 Msa1044480:intron 45.0%
!! CAACACAATGAAGGTGTTGG+TGG + chr7_2:2831729-2831748 None:intergenic 45.0%
CACCAACACCTTCATTGTGT+TGG - chr7_2:2831727-2831746 Msa1044480:intron 45.0%
GGAACTTCCAACAAAAGGTG+AGG + chr7_2:2831827-2831846 None:intergenic 45.0%
! TGGAAGTTCCACATCGATTG+TGG - chr7_2:2831837-2831856 Msa1044480:CDS 45.0%
!! CAACACAATGAAGGTGTTGG+TGG + chr7_2:2831729-2831748 None:intergenic 45.0%
CACCAACACCTTCATTGTGT+TGG - chr7_2:2831727-2831746 Msa1044480:intron 45.0%
! CCTCGCAAAACTTGCTTGTA+AGG + chr7_2:2832013-2832032 None:intergenic 45.0%
! CCTTACAAGCAAGTTTTGCG+AGG - chr7_2:2832010-2832029 Msa1044480:intron 45.0%
TGAGCCTAAAGCATGGATGA+TGG + chr7_2:2832108-2832127 None:intergenic 45.0%
! CATCCATGCTTTAGGCTCAT+TGG - chr7_2:2832109-2832128 Msa1044480:intron 45.0%
! TCCATGCTTTAGGCTCATTG+GGG - chr7_2:2832111-2832130 Msa1044480:intron 45.0%
TGGAAATTCCGCCTTCATTG+CGG - chr7_2:2832153-2832172 Msa1044480:intron 45.0%
TAGAGGCCATATCGCAATGT+GGG + chr7_2:2832263-2832282 None:intergenic 45.0%
ATAGAGGCCATATCGCAATG+TGG + chr7_2:2832264-2832283 None:intergenic 45.0%
AAAAATGCGTCCAGCATGTC+GGG - chr7_2:2832539-2832558 Msa1044480:intron 45.0%
CGCTGCTAATCATGTCCATT+AGG - chr7_2:2832698-2832717 Msa1044480:intron 45.0%
TGCCAAATGTGTGAACTGGT+AGG - chr7_2:2832813-2832832 Msa1044480:CDS 45.0%
GCCAAATGTGTGAACTGGTA+GGG - chr7_2:2832814-2832833 Msa1044480:CDS 45.0%
TCCCTACCAGTTCACACATT+TGG + chr7_2:2832818-2832837 None:intergenic 45.0%
CACCTCAATTTACAGGGATG+AGG - chr7_2:2832902-2832921 Msa1044480:intron 45.0%
AGGGATGAGGAATATGACAC+AGG - chr7_2:2832915-2832934 Msa1044480:intron 45.0%
!! GAGGATTTCTGAGGCTAGAA+TGG + chr7_2:2833043-2833062 None:intergenic 45.0%
ATGTTGGGATCGAGCTATAG+AGG - chr7_2:2833172-2833191 Msa1044480:CDS 45.0%
!!! TTTTCAATTTTTATATTTAT+AGG - chr7_2:2826387-2826406 Msa1044480:intron 5.0%
TTCGGAGGTGGTAGGGTTTA+GGG + chr7_2:2825862-2825881 None:intergenic 50.0%
! AACAAGTTGTCGGTGTTCGG+AGG + chr7_2:2825877-2825896 None:intergenic 50.0%
!! CTCCGAGTTTGGTTTGGATC+CGG - chr7_2:2825944-2825963 Msa1044480:three_prime_UTR 50.0%
CTCCGGATCCAAACCAAACT+CGG + chr7_2:2825949-2825968 None:intergenic 50.0%
!!! ATTTTCAGGGTGCTGGGCTT+TGG - chr7_2:2826147-2826166 Msa1044480:intron 50.0%
GCGCACAAAATCCAGCAATG+TGG + chr7_2:2826413-2826432 None:intergenic 50.0%
TCTAGCAAAAAACGGGGTGG+AGG + chr7_2:2827072-2827091 None:intergenic 50.0%
GCTTCTAGCAAAAAACGGGG+TGG + chr7_2:2827075-2827094 None:intergenic 50.0%
CACGCAATTTCCGAAAGGCT+AGG - chr7_2:2827151-2827170 Msa1044480:intron 50.0%
CAATTTCCGAAAGGCTAGGC+AGG - chr7_2:2827155-2827174 Msa1044480:intron 50.0%
! CATCTTCCTGCCTAGCCTTT+CGG + chr7_2:2827164-2827183 None:intergenic 50.0%
CATAAATGCTGCCTGCCTTC+TGG - chr7_2:2827219-2827238 Msa1044480:intron 50.0%
GATTCACTCGGTACTCCAGA+AGG + chr7_2:2827237-2827256 None:intergenic 50.0%
! GCTGCAGAACTTTTGGATGG+AGG - chr7_2:2827600-2827619 Msa1044480:intron 50.0%
TCAAGTTTCTCCCGTTTGGC+AGG - chr7_2:2827923-2827942 Msa1044480:intron 50.0%
ACATCTCCATCCTGCCAAAC+GGG + chr7_2:2827936-2827955 None:intergenic 50.0%
CACATCTCCATCCTGCCAAA+CGG + chr7_2:2827937-2827956 None:intergenic 50.0%
ATACTCGTTATACGGGGTCC+TGG - chr7_2:2827959-2827978 Msa1044480:intron 50.0%
GGTATACCTTGGATGACACC+CGG - chr7_2:2828048-2828067 Msa1044480:intron 50.0%
GTATACCTTGGATGACACCC+GGG - chr7_2:2828049-2828068 Msa1044480:intron 50.0%
TCAGTTAGCGTTATCTGGCC+GGG - chr7_2:2828167-2828186 Msa1044480:CDS 50.0%
! TACCTACTAACCGGTTCAGC+AGG - chr7_2:2828642-2828661 Msa1044480:intron 50.0%
AACCTGCTGAACCGGTTAGT+AGG + chr7_2:2828647-2828666 None:intergenic 50.0%
!! TTCTCCGGTGTGTTGGTCTT+TGG + chr7_2:2828773-2828792 None:intergenic 50.0%
TCTTGTCTTCTCCGGTGTGT+TGG + chr7_2:2828780-2828799 None:intergenic 50.0%
TGCTCCGTCATCTTCCTCTA+CGG + chr7_2:2828823-2828842 None:intergenic 50.0%
GACGGAGCAGTCATGGAAAA+TGG - chr7_2:2828834-2828853 Msa1044480:intron 50.0%
ACAAAGAATTTGGCTGGCGG+TGG + chr7_2:2828962-2828981 None:intergenic 50.0%
GCCGTCGTCTACAATCTCAA+TGG + chr7_2:2829284-2829303 None:intergenic 50.0%
AAGGTCAGTTCGCAAACGGT+TGG + chr7_2:2829315-2829334 None:intergenic 50.0%
GACATGTGGCACCATACACA+TGG - chr7_2:2829425-2829444 Msa1044480:CDS 50.0%
GGTAAGTCATGTCGGTGAAC+AGG - chr7_2:2829527-2829546 Msa1044480:intron 50.0%
!! AGTGCATTGGTTGGGGTTGA+AGG + chr7_2:2829678-2829697 None:intergenic 50.0%
! CTTCAGCGGGGGAATTTTTC+TGG + chr7_2:2830250-2830269 None:intergenic 50.0%
TGCAACGGCATCAACTTCAG+CGG + chr7_2:2830264-2830283 None:intergenic 50.0%
ACAAACTTGTCAGAGTGCGC+TGG - chr7_2:2830299-2830318 Msa1044480:intron 50.0%
GCCCCAATATATGGGCAAAC+AGG + chr7_2:2830369-2830388 None:intergenic 50.0%
CTAGGCATCTCAACGAAAGG+CGG + chr7_2:2830604-2830623 None:intergenic 50.0%
TGTTGTGACTCGAGGTCTAG+AGG - chr7_2:2830901-2830920 Msa1044480:intron 50.0%
TTTGGGTACAGTTGCGCGTT+GGG - chr7_2:2831526-2831545 Msa1044480:CDS 50.0%
GACTCCAAGACCTGAGATGA+AGG + chr7_2:2831566-2831585 None:intergenic 50.0%
ACTGACCAGATTGCTCGCAT+TGG - chr7_2:2831590-2831609 Msa1044480:intron 50.0%
AAAGCCACATTAGGCGGCTA+GGG + chr7_2:2831687-2831706 None:intergenic 50.0%
AAAAGCCACATTAGGCGGCT+AGG + chr7_2:2831688-2831707 None:intergenic 50.0%
AAAGCCACATTAGGCGGCTA+GGG + chr7_2:2831687-2831706 None:intergenic 50.0%
AAAAGCCACATTAGGCGGCT+AGG + chr7_2:2831688-2831707 None:intergenic 50.0%
TCCCATGTTGCCTAGAGACA+CGG - chr7_2:2831951-2831970 Msa1044480:intron 50.0%
TTAGGGACAGTCCGCAATGA+AGG + chr7_2:2832167-2832186 None:intergenic 50.0%
! TTGCGGACTGTCCCTAATTG+CGG - chr7_2:2832170-2832189 Msa1044480:intron 50.0%
! GGTGTTGGAGGTTGCAATGA+AGG + chr7_2:2832206-2832225 None:intergenic 50.0%
GCAGCCTTTACCTTACAAGC+CGG - chr7_2:2832302-2832321 Msa1044480:intron 50.0%
!! GAATATTGGGTTGAGCCTGC+CGG + chr7_2:2832324-2832343 None:intergenic 50.0%
GAGCTGCCAAATGTGTGAAC+TGG - chr7_2:2832809-2832828 Msa1044480:CDS 50.0%
TGTGTGAACTGGTAGGGACT+AGG - chr7_2:2832820-2832839 Msa1044480:CDS 50.0%
GTGTGAACTGGTAGGGACTA+GGG - chr7_2:2832821-2832840 Msa1044480:CDS 50.0%
GTTCGGAGGTGGTAGGGTTT+AGG + chr7_2:2825863-2825882 None:intergenic 55.0%
! AAGTTGTCGGTGTTCGGAGG+TGG + chr7_2:2825874-2825893 None:intergenic 55.0%
GTAATTCCGAGGCTGAGCTC+CGG + chr7_2:2825966-2825985 None:intergenic 55.0%
!! GGTGCTGGGCTTTGGAATCT+TGG - chr7_2:2826155-2826174 Msa1044480:intron 55.0%
TGCAGCTAAGGGCTCAGTGT+AGG + chr7_2:2826219-2826238 None:intergenic 55.0%
!! GGAGTACCGAGTGAATCACC+TGG - chr7_2:2827240-2827259 Msa1044480:intron 55.0%
TGGTGGTCGTCTTCGAAGTC+AGG - chr7_2:2827296-2827315 Msa1044480:intron 55.0%
ACCTTTCGTCAGCGGCTCAT+CGG - chr7_2:2827794-2827813 Msa1044480:intron 55.0%
GTTTCTCCCGTTTGGCAGGA+TGG - chr7_2:2827927-2827946 Msa1044480:intron 55.0%
TACGGGGTCCTGGTTCATTC+TGG - chr7_2:2827969-2827988 Msa1044480:intron 55.0%
CAGTTAGCGTTATCTGGCCG+GGG - chr7_2:2828168-2828187 Msa1044480:CDS 55.0%
! CAGCTGAAGTAGGGCACCTA+GGG + chr7_2:2828510-2828529 None:intergenic 55.0%
! ACAGCTGAAGTAGGGCACCT+AGG + chr7_2:2828511-2828530 None:intergenic 55.0%
GGCTCCAAAGACCAACACAC+CGG - chr7_2:2828766-2828785 Msa1044480:CDS 55.0%
CAAGAGTGATGAGAGGAGGG+AGG - chr7_2:2828795-2828814 Msa1044480:intron 55.0%
GGAGCCGTAGAGGAAGATGA+CGG - chr7_2:2828816-2828835 Msa1044480:intron 55.0%
!! GGAAGATGACGGAGCAGTCA+TGG - chr7_2:2828827-2828846 Msa1044480:intron 55.0%
AAGAATTTGGCTGGCGGTGG+AGG + chr7_2:2828959-2828978 None:intergenic 55.0%
! TTCTGGGTTGTACTGGTGGG+AGG + chr7_2:2829024-2829043 None:intergenic 55.0%
GAGATTGTAGACGACGGCGT+CGG - chr7_2:2829286-2829305 Msa1044480:CDS 55.0%
AACGGCATCAACTTCAGCGG+GGG + chr7_2:2830261-2830280 None:intergenic 55.0%
CAACGGCATCAACTTCAGCG+GGG + chr7_2:2830262-2830281 None:intergenic 55.0%
GCAACGGCATCAACTTCAGC+GGG + chr7_2:2830263-2830282 None:intergenic 55.0%
CGCCTTTCGTTGAGATGCCT+AGG - chr7_2:2830602-2830621 Msa1044480:intron 55.0%
GGCCTAGGCATCTCAACGAA+AGG + chr7_2:2830607-2830626 None:intergenic 55.0%
CGAGGTCTAGAGGAGACAGT+TGG - chr7_2:2830911-2830930 Msa1044480:intron 55.0%
CTTTGGGTACAGTTGCGCGT+TGG - chr7_2:2831525-2831544 Msa1044480:CDS 55.0%
AGTTGCGCGTTGGGATGATG+TGG - chr7_2:2831535-2831554 Msa1044480:CDS 55.0%
TCCCACGTTGCCTAGAGACA+CGG - chr7_2:2831770-2831789 Msa1044480:CDS 55.0%
CTACACAAGCCCGTGTCTCT+AGG + chr7_2:2831783-2831802 None:intergenic 55.0%
GGGACAGACCACAATCGATG+TGG + chr7_2:2831667-2831686 None:intergenic 55.0%
CCCGTGTCTCTAGGCAACAT+GGG + chr7_2:2831955-2831974 None:intergenic 55.0%
CCCATGTTGCCTAGAGACAC+GGG - chr7_2:2831952-2831971 Msa1044480:intron 55.0%
CTACACAAGCCCGTGTCTCT+AGG + chr7_2:2831783-2831802 None:intergenic 55.0%
GCCCCAATGAGCCTAAAGCA+TGG + chr7_2:2832115-2832134 None:intergenic 55.0%
CCTCCAACACCTTCATTGCG+CGG - chr7_2:2832215-2832234 Msa1044480:intron 55.0%
CTCCAACACCTTCATTGCGC+GGG - chr7_2:2832216-2832235 Msa1044480:intron 55.0%
TCCAACACCTTCATTGCGCG+GGG - chr7_2:2832217-2832236 Msa1044480:intron 55.0%
! TTCATTGCGCGGGGTGTCAA+GGG - chr7_2:2832226-2832245 Msa1044480:intron 55.0%
!! CCTGCCGGCTTGTAAGGTAA+AGG + chr7_2:2832309-2832328 None:intergenic 55.0%
CCTTTACCTTACAAGCCGGC+AGG - chr7_2:2832306-2832325 Msa1044480:intron 55.0%
CCTAATGTGTCCCGACATGC+TGG + chr7_2:2832552-2832571 None:intergenic 55.0%
CCAGCATGTCGGGACACATT+AGG - chr7_2:2832549-2832568 Msa1044480:CDS 55.0%
! GTCGGTGTTCGGAGGTGGTA+GGG + chr7_2:2825869-2825888 None:intergenic 60.0%
! TGTCGGTGTTCGGAGGTGGT+AGG + chr7_2:2825870-2825889 None:intergenic 60.0%
TTGGATCCGGAGCTCAGCCT+CGG - chr7_2:2825957-2825976 Msa1044480:three_prime_UTR 60.0%
GTCCAGTTGCTTGCAGGGCA+CGG + chr7_2:2826461-2826480 None:intergenic 60.0%
GCAAAAAACGGGGTGGAGGC+AGG + chr7_2:2827068-2827087 None:intergenic 60.0%
CACTCGGTACTCCAGAAGGC+AGG + chr7_2:2827233-2827252 None:intergenic 60.0%
ACCGATGAGCCGCTGACGAA+AGG + chr7_2:2827798-2827817 None:intergenic 60.0%
! CAGTACCCGGGTGTCATCCA+AGG + chr7_2:2828057-2828076 None:intergenic 60.0%
! GAAGTAGGGCACCTAGGGTC+TGG + chr7_2:2828505-2828524 None:intergenic 60.0%
! GGTGATGGCAGGGAAGACGA+CGG - chr7_2:2828855-2828874 Msa1044480:intron 60.0%
GTGATGGCAGGGAAGACGAC+GGG - chr7_2:2828856-2828875 Msa1044480:intron 60.0%
GATTCTTCTTCCGCGGGCCT+AGG + chr7_2:2830622-2830641 None:intergenic 60.0%
CTGTCCCTAGCCGCCTAATG+TGG - chr7_2:2831680-2831699 Msa1044480:intron 60.0%
CCCGTGTCTCTAGGCAACGT+GGG + chr7_2:2831774-2831793 None:intergenic 60.0%
CCCACGTTGCCTAGAGACAC+GGG - chr7_2:2831771-2831790 Msa1044480:CDS 60.0%
! GGGCAGCCCTCACCTTTTGT+TGG - chr7_2:2831817-2831836 Msa1044480:CDS 60.0%
CTGTCCCTAGCCGCCTAATG+TGG - chr7_2:2831680-2831699 Msa1044480:intron 60.0%
GCCCGTGTCTCTAGGCAACA+TGG + chr7_2:2831956-2831975 None:intergenic 60.0%
TAGGCTCATTGGGGCCTTGC+AGG - chr7_2:2832120-2832139 Msa1044480:intron 60.0%
ATTGGGGCCTTGCAGGAGGA+GGG - chr7_2:2832127-2832146 Msa1044480:intron 60.0%
GGGACAGTCCGCAATGAAGG+CGG + chr7_2:2832164-2832183 None:intergenic 60.0%
!! CCGCGCAATGAAGGTGTTGG+AGG + chr7_2:2832218-2832237 None:intergenic 60.0%
! ACCCCGCGCAATGAAGGTGT+TGG + chr7_2:2832221-2832240 None:intergenic 60.0%
CTTGACACCCCGCGCAATGA+AGG + chr7_2:2832227-2832246 None:intergenic 60.0%
! CTTCATTGCGCGGGGTGTCA+AGG - chr7_2:2832225-2832244 Msa1044480:intron 60.0%
! TCATTGCGCGGGGTGTCAAG+GGG - chr7_2:2832227-2832246 Msa1044480:intron 60.0%
!! GTTGAGCCTGCCGGCTTGTA+AGG + chr7_2:2832315-2832334 None:intergenic 60.0%
AGCCGTGCCCTGCAAGCAAC+TGG - chr7_2:2826456-2826475 Msa1044480:intron 65.0%
!! GTTGGTCTTTGGAGCCGCCG+TGG + chr7_2:2828762-2828781 None:intergenic 65.0%
AGAGGAGGGAGGAGCCGTAG+AGG - chr7_2:2828806-2828825 Msa1044480:intron 65.0%
CGTTGAGATGCCTAGGCCCG+CGG - chr7_2:2830609-2830628 Msa1044480:intron 65.0%
GCCCGTGTCTCTAGGCAACG+TGG + chr7_2:2831775-2831794 None:intergenic 65.0%
GCTCATTGGGGCCTTGCAGG+AGG - chr7_2:2832123-2832142 Msa1044480:intron 65.0%
CATTGGGGCCTTGCAGGAGG+AGG - chr7_2:2832126-2832145 Msa1044480:intron 65.0%
TTGGGGCCTTGCAGGAGGAG+GGG - chr7_2:2832128-2832147 Msa1044480:intron 65.0%
TCCAACCCCCTCCTCCTGCA+AGG + chr7_2:2832137-2832156 None:intergenic 65.0%
TGGGGCCTTGCAGGAGGAGG+GGG - chr7_2:2832129-2832148 Msa1044480:intron 70.0%
GCCTTGCAGGAGGAGGGGGT+TGG - chr7_2:2832133-2832152 Msa1044480:intron 70.0%
! TTGCGCGGGGTGTCAAGGGG+TGG - chr7_2:2832230-2832249 Msa1044480:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 2825545 2833515 2825545 ID=Msa1044480;Name=Msa1044480
chr7_2 mRNA 2825545 2833515 2825545 ID=Msa1044480-mRNA-1;Parent=Msa1044480;Name=Msa1044480-mRNA-1;_AED=0.13;_eAED=0.13;_QI=187|0.7|0.81|0.90|1|1|11|439|829
chr7_2 exon 2825545 2826143 2825545 ID=Msa1044480-mRNA-1:exon:769;Parent=Msa1044480-mRNA-1
chr7_2 exon 2826230 2826263 2826230 ID=Msa1044480-mRNA-1:exon:768;Parent=Msa1044480-mRNA-1
chr7_2 exon 2828128 2828632 2828128 ID=Msa1044480-mRNA-1:exon:767;Parent=Msa1044480-mRNA-1
chr7_2 exon 2828735 2828809 2828735 ID=Msa1044480-mRNA-1:exon:766;Parent=Msa1044480-mRNA-1
chr7_2 exon 2828900 2829496 2828900 ID=Msa1044480-mRNA-1:exon:765;Parent=Msa1044480-mRNA-1
chr7_2 exon 2830990 2831115 2830990 ID=Msa1044480-mRNA-1:exon:764;Parent=Msa1044480-mRNA-1
chr7_2 exon 2831245 2831571 2831245 ID=Msa1044480-mRNA-1:exon:763;Parent=Msa1044480-mRNA-1
chr7_2 exon 2831743 2831915 2831743 ID=Msa1044480-mRNA-1:exon:762;Parent=Msa1044480-mRNA-1
chr7_2 exon 2832541 2832651 2832541 ID=Msa1044480-mRNA-1:exon:761;Parent=Msa1044480-mRNA-1
chr7_2 exon 2832791 2832905 2832791 ID=Msa1044480-mRNA-1:exon:760;Parent=Msa1044480-mRNA-1
chr7_2 exon 2833062 2833515 2833062 ID=Msa1044480-mRNA-1:exon:759;Parent=Msa1044480-mRNA-1
chr7_2 five_prime_UTR 2833329 2833515 2833329 ID=Msa1044480-mRNA-1:five_prime_utr;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2833062 2833328 2833062 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2832791 2832905 2832791 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2832541 2832651 2832541 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2831743 2831915 2831743 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2831245 2831571 2831245 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2830990 2831115 2830990 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2828900 2829496 2828900 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2828735 2828809 2828735 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2828128 2828632 2828128 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2826230 2826263 2826230 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 CDS 2825984 2826143 2825984 ID=Msa1044480-mRNA-1:cds;Parent=Msa1044480-mRNA-1
chr7_2 three_prime_UTR 2825545 2825983 2825545 ID=Msa1044480-mRNA-1:three_prime_utr;Parent=Msa1044480-mRNA-1
Gene Sequence

>Msa1044480

ATGTCAGAAACTTTAATGGCTGAAACCGAAACTATTACCAAACAACACGATCCATTTCAGAGAAAAATCGAATTCATACCTGTTAAAAAACCATTCAAAGGCTTTTCCAATGATTTTCACATCGAAACCCTAAACCCTACCACCTCCGAACACCGACAACTTGTTTCCGCTAATATTCAATCATCGCAGCCACCTTCCAAAAATTCTGAATTCTCCGAGTTTGGTTTGGATCCGGAGCTCAGCCTCGGAATTACCTTTCGCAGAATAGGTGCTGGGCTTTGGAATCTTGGAAACACTTGTTTTCTGAATTCAGTTTTGCAGTGTTTGACCTACACTGAGCCCTTAGCTGCATATCTGCAAAGTGGCAAACATAAAAGTTCATGCCACATTGCTGGATTTTGTGCGCTTTGTGCAATTCAGAGTCATGTTAGCCGTGCCCTGCAAGCAACTGGACGAATATTATCGCCACAGGATATGGTTGGAAATCTGCGGTGCATATCACGCAATTTCCGAAAGGCTAGGCAGGAAGATGCACATGAGTATATGGTGAACTTACTTGAGTCAATGCATAAATGCTGCCTGCCTTCTGGAGTACCGAGTGAATCACCTGGTGCTTTCGAGAAAAGTTTAGTTCATAAGATCTTTGGTGGTCGTCTTCGAAGTCAGGTGAAATGCAGACAGTGTTCTTATTCCTCCAACAAATTTGATCCGTTCTTAGATTTAAGTCTTGAAATTTTAAAGGCAGATTCACTACAAAAGGCACTAGCAAATTTCACAGCTGCAGAACTTTTGGATGGAGGAGAGAAGCAATACCATTGTCAACGTTGCAAGCAGAAAGTGCAAGCTGTCAAACAGCTAACAATTCATAAGGCACCTTATGTGCTAGCAATTCATTTAAAGAGATTCTACCCTCATGACCCTAACATAAAGATTAAAAAGAAAGTTCGGTTTGACTCCGCACTGAATTTGAAACCTTTCGTCAGCGGCTCATCGGATGGAGATGTGAAATACTCGTTATACGGGGTCCTGGTTCATTCTGGTTTTAGTACTCACTCTGGCCACTATTACTGCTATGTCCGCACTTCAAATAACATGTGGTATACCTTGGATGACACCCGGCAAGCTTACATGTTGTTTTATGTTCGTGATAAAAAAAGTATTGCTCCAAGGAAGCCTGTTAATATCGCTAAGGAAGAGATTTCAAAGACTAATGTTACTGGAAGTAGATATCCTTCAACCCCAACCAATGCACTGAAAGATTATCCAAATGGTCATGTGGAAAATAAGTTTTGTGGGGTACCTTTGACTGCAGAAACTCAGAAAAATTTGTTAAATGCTGATCCATCAAGGATATCATATGTGAAGGATGCTCTGGTTCAGCAAAATAATAGTGGCATTTTAGCAAAAAGCTTAATTCATAATGAATGTTTATCTAAACGTACTTCCAAGGAACTTACACAGATGAATTCATCAGACGAGCTCCCTGTTGCTAAATCAGAACTTGAATGTTTATCATCCTTAGATCACTCTGGAAAAGACAATGTGGCTGGTAATCAGAAATGTTTAGTTGCACCAGCTGGAGACAAACCTAATCTGTTTACTGAGGATACACTTTTAAAAGAGGGTGTTGATTCTCCTTTAATTGAGCCAATCGTCAGTAATCCCCAAACAGTTACTGGTAAACATGCTAGTGACATAACATCACCGTCTGATGAGAAAAATTCCCCCGCTGAAGTTGATGCCGTTGCAGCTCAAGATTCAGTCACAAACTTGTCAGAGTGCGCTGGCCTTGTTGGAACTTCAAATGGTTTGGTGTATAAGAAAGCATGCAAATTATTGTGTAAGAATGCAGTTGTTTCATCAAACAGATCCTTGAAAGACTCAACTCTTGATCAAAAGCAAGTGAAAAAATCAAAAAAGAAGTTTCCAAAGTACAAGGGATCAATCATGCAACTTAGCTCGATCCGCCTTTCGTTGAGATGCCTAGGCCCGCGGAAGAAGAATCACAAAAAAAATAGACGCTGCTTGTTGGGTTTGAAGTATCATAGTAAAGAAAAGTTGAATAAACTTGCCATTTCATCAGATGTTGGACCATCTATATCCGGAAAAGACCATTTACGTTCTTCTCTGATGAAGCATGATGCTGAAGGAGAGATTATAAACAGGATGGATCGGAACTGTGCTGCGCTTGCAACAGCTACACAAGTAGAAAATATGTCCCGATGTAGTCTACAAGATGATAAGAGGGATCAAATGCATAATACTGTTGTGACTCGAGGTCTAGAGGAGACAGTTGACTATTACTTTAGAGCTGCCAAATGTGTGAACTGGGATGAGGAATATGACACAGGAAAGAGAAAGAAGTTAAGGTGTTTGAAGCAGAGTTTTGGTGGGCCAAATATTTTTCAAGAAATCGCTACCGAGAAATCTAAGTTAAAAAGGGCAAAATTAGACCATTCTAGCCTCAGAAATCCTCCATTCAGAATATAA
Protein sequence

>Msa1044480

MSETLMAETETITKQHDPFQRKIEFIPVKKPFKGFSNDFHIETLNPTTSEHRQLVSANIQSSQPPSKNSEFSEFGLDPELSLGITFRRIGAGLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHIAGFCALCAIQSHVSRALQATGRILSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPSESPGAFEKSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEILKADSLQKALANFTAAELLDGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHLKRFYPHDPNIKIKKKVRFDSALNLKPFVSGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRQAYMLFYVRDKKSIAPRKPVNIAKEEISKTNVTGSRYPSTPTNALKDYPNGHVENKFCGVPLTAETQKNLLNADPSRISYVKDALVQQNNSGILAKSLIHNECLSKRTSKELTQMNSSDELPVAKSELECLSSLDHSGKDNVAGNQKCLVAPAGDKPNLFTEDTLLKEGVDSPLIEPIVSNPQTVTGKHASDITSPSDEKNSPAEVDAVAAQDSVTNLSECAGLVGTSNGLVYKKACKLLCKNAVVSSNRSLKDSTLDQKQVKKSKKKFPKYKGSIMQLSSIRLSLRCLGPRKKNHKKNRRCLLGLKYHSKEKLNKLAISSDVGPSISGKDHLRSSLMKHDAEGEIINRMDRNCAALATATQVENMSRCSLQDDKRDQMHNTVVTRGLEETVDYYFRAAKCVNWDEEYDTGKRKKLRCLKQSFGGPNIFQEIATEKSKLKRAKLDHSSLRNPPFRI*