Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066740 | sp|Q9M8Z5|NSN1_ARATH | 65.116 | 602 | 179 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066740 | A0A072VI64 | 96.327 | 599 | 22 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0066740 | 0.877681 | 5.169703e-69 | -8.615850e-47 |
| Msa0022970 | Msa0066740 | 0.806148 | 9.470561e-50 | -8.615850e-47 |
| Msa0066740 | Msa0076780 | 0.802374 | 5.783480e-49 | -8.615850e-47 |
| Msa0066740 | Msa0090080 | 0.802481 | 5.497716e-49 | -8.615850e-47 |
| Msa0066740 | Msa0146770 | 0.805020 | 1.633169e-49 | -8.615850e-47 |
| Msa0066740 | Msa0158000 | 0.877688 | 5.141004e-69 | -8.615850e-47 |
| Msa0066740 | Msa0231660 | 0.808689 | 2.737843e-50 | -8.615850e-47 |
| Msa0066740 | Msa0269180 | 0.822885 | 1.864232e-53 | -8.615850e-47 |
| Msa0066740 | Msa0300350 | 0.802795 | 4.735445e-49 | -8.615850e-47 |
| Msa0066740 | Msa0455720 | 0.873278 | 1.664603e-67 | -8.615850e-47 |
| Msa0066740 | Msa0554290 | 0.861077 | 1.321475e-63 | -8.615850e-47 |
| Msa0066740 | Msa0605000 | 0.838723 | 2.427640e-57 | -8.615850e-47 |
| Msa0066740 | Msa0612390 | 0.801847 | 7.421897e-49 | -8.615850e-47 |
| Msa0066740 | Msa0638370 | 0.804395 | 2.205185e-49 | -8.615850e-47 |
| Msa0066740 | Msa0685140 | 0.808930 | 2.431273e-50 | -8.615850e-47 |
| Msa0066740 | Msa0718910 | 0.857455 | 1.613593e-62 | -8.615850e-47 |
| Msa0066740 | Msa0719420 | 0.842868 | 1.988417e-58 | -8.615850e-47 |
| Msa0066740 | Msa0763330 | 0.815461 | 9.134544e-52 | -8.615850e-47 |
| Msa0066740 | Msa0772480 | 0.812971 | 3.241723e-51 | -8.615850e-47 |
| Msa0066740 | Msa0789680 | 0.841143 | 5.682261e-58 | -8.615850e-47 |
| Msa0066740 | Msa0798440 | 0.802447 | 5.585254e-49 | -8.615850e-47 |
| Msa0066740 | Msa0802410 | 0.822860 | 1.889818e-53 | -8.615850e-47 |
| Msa0066740 | Msa0859180 | 0.806705 | 7.223376e-50 | -8.615850e-47 |
| Msa0066740 | Msa0882580 | 0.805516 | 1.285701e-49 | -8.615850e-47 |
| Msa0066740 | Msa0901450 | 0.823668 | 1.223953e-53 | -8.615850e-47 |
| Msa0066740 | Msa0925770 | 0.873282 | 1.658948e-67 | -8.615850e-47 |
| Msa0066740 | Msa0933300 | 0.812325 | 4.487160e-51 | -8.615850e-47 |
| Msa0066740 | Msa0945440 | 0.809194 | 2.134268e-50 | -8.615850e-47 |
| Msa0066740 | Msa1001350 | 0.800632 | 1.315672e-48 | -8.615850e-47 |
| Msa0066740 | Msa1027640 | 0.812464 | 4.184855e-51 | -8.615850e-47 |
| Msa0066740 | Msa1064260 | 0.807768 | 4.300638e-50 | -8.615850e-47 |
| Msa0066740 | Msa1197320 | 0.820115 | 8.135883e-53 | -8.615850e-47 |
| Msa0066740 | Msa1260530 | 0.827612 | 1.420971e-54 | -8.615850e-47 |
| Msa0066740 | Msa1331710 | 0.822366 | 2.461451e-53 | -8.615850e-47 |
| Msa0066740 | Msa1387410 | 0.833285 | 5.824109e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066740 | MtrunA17_Chr1g0170031 | 96.327 | 599 | 22 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1160 |
| Msa0066740 | MtrunA17_Chr2g0317811 | 34.848 | 396 | 225 | 7 | 125 | 513 | 197 | 566 | 3.63e-60 | 210 |
| Msa0066740 | MtrunA17_Chr4g0042571 | 38.676 | 287 | 153 | 3 | 125 | 411 | 189 | 452 | 5.09e-58 | 204 |
| Msa0066740 | MtrunA17_Chr4g0025451 | 27.389 | 314 | 188 | 5 | 136 | 411 | 162 | 473 | 1.94e-27 | 117 |
| Msa0066740 | MtrunA17_Chr7g0259841 | 29.756 | 205 | 122 | 5 | 144 | 346 | 119 | 303 | 4.52e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066740 | AT3G07050.1 | 65.116 | 602 | 179 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
| Msa0066740 | AT1G52980.1 | 38.235 | 306 | 166 | 3 | 125 | 430 | 199 | 481 | 8.89e-59 | 206 |
| Msa0066740 | AT2G27200.1 | 28.479 | 309 | 188 | 5 | 136 | 411 | 161 | 469 | 1.51e-30 | 126 |
| Msa0066740 | AT1G08410.1 | 27.900 | 319 | 193 | 5 | 136 | 417 | 161 | 479 | 2.56e-30 | 126 |
| Msa0066740 | AT4G02790.1 | 29.720 | 286 | 153 | 10 | 144 | 412 | 118 | 372 | 1.85e-15 | 79.0 |
Find 139 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTGCTCGCCTCAATTT+TGG | 0.124286 | 1_2:+30745176 | None:intergenic |
| TTCAATTCCTGTTCCTTAAA+AGG | 0.143573 | 1_2:+30751275 | None:intergenic |
| AAAGCAATACATGACGTTTA+TGG | 0.143814 | 1_2:+30749797 | None:intergenic |
| AATAGTGAAACTTCATTTAT+TGG | 0.146286 | 1_2:-30745823 | Msa0066740:CDS |
| CTACTGTCCCTTCAACAATT+TGG | 0.212143 | 1_2:-30744751 | Msa0066740:three_prime_UTR |
| CAAAGTTGATTACTTCAAAA+AGG | 0.273492 | 1_2:-30745090 | Msa0066740:CDS |
| TCTTGTTTCAGGCTCGTAAA+AGG | 0.281841 | 1_2:-30750166 | Msa0066740:intron |
| TACAGATTGTGGCTACTGTT+AGG | 0.291683 | 1_2:-30746141 | Msa0066740:CDS |
| AGAAGCCGTTTCAACTGAAT+TGG | 0.312062 | 1_2:+30750112 | None:intergenic |
| CTTCAAGTACCTGGGCTAAC+TGG | 0.316334 | 1_2:+30747440 | None:intergenic |
| ACTGGAGGCATGGTATAATA+TGG | 0.318054 | 1_2:+30745922 | None:intergenic |
| CCAATACAGAAACAAAGTTT+TGG | 0.318904 | 1_2:-30744841 | Msa0066740:intron |
| TAGGGCCTTTGCCAGTGATT+TGG | 0.321863 | 1_2:-30749926 | Msa0066740:CDS |
| AACCCTTTCAAACCCTAAAA+TGG | 0.323396 | 1_2:-30751554 | Msa0066740:exon |
| ATAGTGAAACTTCATTTATT+GGG | 0.325794 | 1_2:-30745822 | Msa0066740:CDS |
| AAGCAATACATGACGTTTAT+GGG | 0.328299 | 1_2:+30749798 | None:intergenic |
| AGAACGTGCTCTTGCTGAAT+TGG | 0.338023 | 1_2:-30751234 | Msa0066740:CDS |
| TCCTTAAAAGGCCAATCATT+TGG | 0.343965 | 1_2:+30751287 | None:intergenic |
| TTGCAGAGAGTAAGAGTAAG+AGG | 0.361504 | 1_2:-30751433 | Msa0066740:intron |
| GACATCAATCACTGTTGGTT+TGG | 0.362256 | 1_2:-30747687 | Msa0066740:CDS |
| CAATGATGAGGATGAATCTA+TGG | 0.362444 | 1_2:-30745291 | Msa0066740:CDS |
| TTTAAGCACTTGTTAGTTCC+GGG | 0.362450 | 1_2:-30744710 | Msa0066740:three_prime_UTR |
| ATTATACCATGCCTCCAGTT+AGG | 0.362580 | 1_2:-30745918 | Msa0066740:CDS |
| CTTTGATGAGACAATGTTAG+AGG | 0.363951 | 1_2:-30745740 | Msa0066740:intron |
| GTTGAGGTTGATGCATGATT+TGG | 0.366255 | 1_2:-30744981 | Msa0066740:exon |
| GTCGATGTCAGTGCTAGTGC+TGG | 0.375077 | 1_2:-30747605 | Msa0066740:CDS |
| GTTCTTCATGACTGGAATAT+AGG | 0.376417 | 1_2:-30746067 | Msa0066740:intron |
| TTGAATTCTAAACACTATAA+AGG | 0.386427 | 1_2:+30744621 | None:intergenic |
| AACACTGAGGTTCCCATGTC+TGG | 0.390788 | 1_2:-30745005 | Msa0066740:CDS |
| CCTTGATGCCCGGGATCCCT+TGG | 0.391586 | 1_2:-30749866 | Msa0066740:CDS |
| TTGCCCTGGTGTTGTCATGC+TGG | 0.392424 | 1_2:-30747528 | Msa0066740:CDS |
| CTTTGCCAGTGATTTGGATC+AGG | 0.403021 | 1_2:-30749920 | Msa0066740:CDS |
| ACAGATTGTGGCTACTGTTA+GGG | 0.404092 | 1_2:-30746140 | Msa0066740:CDS |
| TCAATCACTGTTGGTTTGGT+TGG | 0.404100 | 1_2:-30747683 | Msa0066740:CDS |
| TTTCCATAGATAGTTCAGAT+AGG | 0.404505 | 1_2:-30749945 | Msa0066740:intron |
| CGCAACAGTAGGAACAGTTT+CGG | 0.415285 | 1_2:+30750079 | None:intergenic |
| AGAAAACTCTGAAACTATCT+TGG | 0.426015 | 1_2:+30745873 | None:intergenic |
| GGTTCTCCTTGATCCCTAAC+TGG | 0.438774 | 1_2:+30745904 | None:intergenic |
| ACAAAATGAGAAGTTATATA+CGG | 0.449103 | 1_2:-30745216 | Msa0066740:CDS |
| AGAGGATGTTAGCAAGGAAA+AGG | 0.452580 | 1_2:-30745258 | Msa0066740:CDS |
| TACTAGAGGTCCTTGATGCC+CGG | 0.453164 | 1_2:-30749876 | Msa0066740:CDS |
| AGCCAGCTCATCTGATCCTA+TGG | 0.453591 | 1_2:-30745129 | Msa0066740:CDS |
| AACGAGTACCCAAGGGATCC+CGG | 0.456156 | 1_2:+30749857 | None:intergenic |
| TGCTTAATCCAAATTGTTGA+AGG | 0.456365 | 1_2:+30744743 | None:intergenic |
| GTCAAAGCAAGAGATTCGTT+TGG | 0.461640 | 1_2:-30747573 | Msa0066740:CDS |
| CTTGATGCCCGGGATCCCTT+GGG | 0.462440 | 1_2:-30749865 | Msa0066740:CDS |
| ATCCTGGTATTCCAAATGAT+TGG | 0.467524 | 1_2:-30751298 | Msa0066740:CDS |
| CAAGAATCGTTCTTCATGAC+TGG | 0.469526 | 1_2:-30746075 | Msa0066740:CDS |
| GGCCAATCATTTGGAATACC+AGG | 0.469715 | 1_2:+30751296 | None:intergenic |
| ACTGTTGCGAAGACTAATAA+AGG | 0.470225 | 1_2:-30750065 | Msa0066740:intron |
| TCATTGTCATCAACATTCTC+AGG | 0.473233 | 1_2:+30745308 | None:intergenic |
| TTATACCATGCCTCCAGTTA+GGG | 0.474258 | 1_2:-30745917 | Msa0066740:CDS |
| TCAATTAAGTGGTAAGAAGA+AGG | 0.475631 | 1_2:-30751330 | Msa0066740:CDS |
| AGAAAGAAGCTCGTAAAGAA+AGG | 0.477638 | 1_2:-30751205 | Msa0066740:CDS |
| TTCCATAGATAGTTCAGATA+GGG | 0.481540 | 1_2:-30749944 | Msa0066740:intron |
| AGACTACTCTTACCAACATT+GGG | 0.485202 | 1_2:+30747656 | None:intergenic |
| CAGGCTCGTAAAAGGAAGGC+GGG | 0.492005 | 1_2:-30750158 | Msa0066740:CDS |
| AAGACTACTCTTACCAACAT+TGG | 0.493721 | 1_2:+30747655 | None:intergenic |
| TCATCAACTGAATCAAAACT+TGG | 0.498766 | 1_2:+30746169 | None:intergenic |
| ATGCCTCCAGTTAGGGATCA+AGG | 0.501122 | 1_2:-30745910 | Msa0066740:CDS |
| TTTGGACAGGTCAAGAATTG+AGG | 0.501154 | 1_2:-30744823 | Msa0066740:three_prime_UTR |
| AAGATGAGAGGGCAACTTGA+AGG | 0.504734 | 1_2:+30745760 | None:intergenic |
| TAACTCCAATTCAGTTGAAA+CGG | 0.507020 | 1_2:-30750117 | Msa0066740:CDS |
| ATCTATGGAAAGTGATAAAG+AGG | 0.508499 | 1_2:-30745276 | Msa0066740:CDS |
| ATCAACCTCAACACCAGACA+TGG | 0.513629 | 1_2:+30744992 | None:intergenic |
| AAGAAGGTTGAGAAAGATCC+TGG | 0.515836 | 1_2:-30751314 | Msa0066740:CDS |
| CCAAGGGATCCCGGGCATCA+AGG | 0.518140 | 1_2:+30749866 | None:intergenic |
| TGATAAAGAGGATGTTAGCA+AGG | 0.518807 | 1_2:-30745264 | Msa0066740:CDS |
| TTTAGGGTTTGAAAGGGTTG+CGG | 0.524075 | 1_2:+30751558 | None:intergenic |
| GGATGACAAAGCAGTTAAGT+TGG | 0.529915 | 1_2:-30745348 | Msa0066740:CDS |
| ATCCATAGGATCAGATGAGC+TGG | 0.532677 | 1_2:+30745127 | None:intergenic |
| GAAAGAAGCTCGTAAAGAAA+GGG | 0.534276 | 1_2:-30751204 | Msa0066740:intron |
| AGAGATATCAGCACCCTAGC+GGG | 0.534816 | 1_2:+30746202 | None:intergenic |
| TTCTCAAGCTCTGTCCCGCT+AGG | 0.535798 | 1_2:-30746216 | Msa0066740:CDS |
| GGTTCCCATGTCTGGTGTTG+AGG | 0.540325 | 1_2:-30744997 | Msa0066740:CDS |
| ACTAGAGGTCCTTGATGCCC+GGG | 0.544113 | 1_2:-30749875 | Msa0066740:CDS |
| CTCAAGACATCAATCACTGT+TGG | 0.544568 | 1_2:-30747692 | Msa0066740:CDS |
| GAAACTATCTTGGCCTCTGA+AGG | 0.545238 | 1_2:+30745883 | None:intergenic |
| TGTTAGGGGCAAGCTCAAGA+AGG | 0.553084 | 1_2:-30746125 | Msa0066740:CDS |
| CTGCATTTGAAAGCGACAGT+AGG | 0.553147 | 1_2:+30749621 | None:intergenic |
| TGCATTTGAAAGCGACAGTA+GGG | 0.553754 | 1_2:+30749622 | None:intergenic |
| TGATGACTTCCTACAGATTG+TGG | 0.555283 | 1_2:-30746152 | Msa0066740:CDS |
| TGAGAAGTTATATACGGCGG+AGG | 0.555785 | 1_2:-30745210 | Msa0066740:CDS |
| GCTTAATCCAAATTGTTGAA+GGG | 0.556503 | 1_2:+30744744 | None:intergenic |
| TTGGTTGGACTGCCCAATGT+TGG | 0.564722 | 1_2:-30747668 | Msa0066740:CDS |
| CTCGAGAGTCAGTTGAGAAG+TGG | 0.566914 | 1_2:-30749668 | Msa0066740:CDS |
| GTTAAGTTGCTGGATTGCCC+TGG | 0.568716 | 1_2:-30747542 | Msa0066740:CDS |
| ACGAGTACCCAAGGGATCCC+GGG | 0.570844 | 1_2:+30749858 | None:intergenic |
| ACATGATCTAACTCAACAGT+AGG | 0.573759 | 1_2:+30745790 | None:intergenic |
| TCGATGTCAGTGCTAGTGCT+GGG | 0.574430 | 1_2:-30747604 | Msa0066740:CDS |
| TTGCAATTAAGTGATTGTCT+CGG | 0.574961 | 1_2:-30749540 | Msa0066740:CDS |
| CTGATCCAAATCACTGGCAA+AGG | 0.574966 | 1_2:+30749921 | None:intergenic |
| TTATTAGTCTTCGCAACAGT+AGG | 0.576810 | 1_2:+30750068 | None:intergenic |
| GAGTCCAGCATGACAACACC+AGG | 0.578166 | 1_2:+30747524 | None:intergenic |
| AAGGAAGGCGGGGTTGCCAG+TGG | 0.578828 | 1_2:-30750147 | Msa0066740:CDS |
| TAAGGAGTTTAACATTGATG+AGG | 0.580829 | 1_2:-30745851 | Msa0066740:CDS |
| AGGACACGATGGATGCTGAC+GGG | 0.582177 | 1_2:-30745070 | Msa0066740:CDS |
| GTGCTAGTGCTGGGTCGACA+AGG | 0.591514 | 1_2:-30747595 | Msa0066740:CDS |
| TTGATCCCTAACTGGAGGCA+TGG | 0.593984 | 1_2:+30745912 | None:intergenic |
| GTTTCAGGCTCGTAAAAGGA+AGG | 0.594629 | 1_2:-30750162 | Msa0066740:intron |
| TCTCAAGCTCTGTCCCGCTA+GGG | 0.595120 | 1_2:-30746215 | Msa0066740:CDS |
| GTTAACACAACGAGTACCCA+AGG | 0.598523 | 1_2:+30749849 | None:intergenic |
| AAGTCATAATCACCATCCAT+AGG | 0.599349 | 1_2:+30745113 | None:intergenic |
| TGCGCACACATAAATTTAGA+CGG | 0.599618 | 1_2:-30744957 | Msa0066740:three_prime_UTR |
| AATAACCTGATCCAAATCAC+TGG | 0.599929 | 1_2:+30749915 | None:intergenic |
| AAGTTGGCAAAACAAGATGA+AGG | 0.603504 | 1_2:-30745332 | Msa0066740:CDS |
| TTGTCTCATCAAAGATGAGA+GGG | 0.604223 | 1_2:+30745749 | None:intergenic |
| CAGATTGTGGCTACTGTTAG+GGG | 0.604493 | 1_2:-30746139 | Msa0066740:CDS |
| CACTTCTCAACTGACTCTCG+AGG | 0.609711 | 1_2:+30749669 | None:intergenic |
| TGCAGAGAGTAAGAGTAAGA+GGG | 0.611372 | 1_2:-30751432 | Msa0066740:intron |
| TTGGAGTTATCATCATCCAC+TGG | 0.612027 | 1_2:+30750131 | None:intergenic |
| GTATACTTAATCCAAAATTG+AGG | 0.617540 | 1_2:-30745187 | Msa0066740:CDS |
| GAGAAGTTATATACGGCGGA+GGG | 0.617540 | 1_2:-30745209 | Msa0066740:CDS |
| AGCTCATCTGATCCTATGGA+TGG | 0.618484 | 1_2:-30745125 | Msa0066740:CDS |
| TAACAGTAGCCACAATCTGT+AGG | 0.620654 | 1_2:+30746143 | None:intergenic |
| GTTAGGGGCAAGCTCAAGAA+GGG | 0.621289 | 1_2:-30746124 | Msa0066740:CDS |
| TTAGCTGATCCAGTTAGCCC+AGG | 0.623020 | 1_2:-30747449 | Msa0066740:intron |
| ATTGTCTCATCAAAGATGAG+AGG | 0.635020 | 1_2:+30745748 | None:intergenic |
| AAGGACACGATGGATGCTGA+CGG | 0.635872 | 1_2:-30745071 | Msa0066740:CDS |
| TAGCACTGACATCGACAGCA+TGG | 0.638654 | 1_2:+30747612 | None:intergenic |
| CAGTAGGGAATTCTTCTCGA+AGG | 0.646359 | 1_2:+30749637 | None:intergenic |
| AGGGGCAAGCTCAAGAAGGG+TGG | 0.649554 | 1_2:-30746121 | Msa0066740:CDS |
| TCAGGCTCGTAAAAGGAAGG+CGG | 0.649927 | 1_2:-30750159 | Msa0066740:intron |
| GAATTATGCAAGAAGCGACA+AGG | 0.656552 | 1_2:-30749490 | Msa0066740:intron |
| TCAACCTCAACACCAGACAT+GGG | 0.660182 | 1_2:+30744993 | None:intergenic |
| GGATCAAGGAGAACCTTCAG+AGG | 0.661640 | 1_2:-30745896 | Msa0066740:CDS |
| AGAGTCTGATGTCATACTAG+AGG | 0.662679 | 1_2:-30749890 | Msa0066740:CDS |
| ATGGATGCTGACGGGAGTGA+CGG | 0.668896 | 1_2:-30745062 | Msa0066740:CDS |
| TCTCCTTGATCCCTAACTGG+AGG | 0.671867 | 1_2:+30745907 | None:intergenic |
| ACTTCTCAACTGACTCTCGA+GGG | 0.678144 | 1_2:+30749670 | None:intergenic |
| AGGCTCGTAAAAGGAAGGCG+GGG | 0.684944 | 1_2:-30750157 | Msa0066740:CDS |
| TTAACACAACGAGTACCCAA+GGG | 0.685445 | 1_2:+30749850 | None:intergenic |
| GATGCTGACGGGAGTGACGG+TGG | 0.688567 | 1_2:-30745059 | Msa0066740:CDS |
| AAATGAGAAGTTATATACGG+CGG | 0.696987 | 1_2:-30745213 | Msa0066740:CDS |
| GACGGTGGTGACGACAATGA+TGG | 0.707599 | 1_2:-30745044 | Msa0066740:CDS |
| GAATGTTGATGACAATGATG+AGG | 0.708173 | 1_2:-30745303 | Msa0066740:CDS |
| AAGAGATATCAGCACCCTAG+CGG | 0.715395 | 1_2:+30746201 | None:intergenic |
| AGTCCAGCATGACAACACCA+GGG | 0.773850 | 1_2:+30747525 | None:intergenic |
| TGATGAACAAGTCAACACTG+AGG | 0.819656 | 1_2:-30745018 | Msa0066740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATAGATTTTTTTTTTTAA+TGG | - | chr1_2:30745116-30745135 | Msa0066740:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTCTTTTGA+AGG | + | chr1_2:30745412-30745431 | None:intergenic | 10.0% |
| !! | ACCTTATTATTATTATTATT+AGG | - | chr1_2:30746974-30746993 | Msa0066740:intron | 10.0% |
| !! | CCTTATTATTATTATTATTA+GGG | - | chr1_2:30746975-30746994 | Msa0066740:intron | 10.0% |
| !! | GAAAAAAACAATTAAAAAAT+TGG | - | chr1_2:30747370-30747389 | Msa0066740:intron | 10.0% |
| !!! | TTTTTTATATCAAAATATGA+AGG | + | chr1_2:30747476-30747495 | None:intergenic | 10.0% |
| !! | AAATAAGAGAATTAATTAAT+GGG | + | chr1_2:30748746-30748765 | None:intergenic | 10.0% |
| !! | TAAATAAGAGAATTAATTAA+TGG | + | chr1_2:30748747-30748766 | None:intergenic | 10.0% |
| !!! | ATTAATTAATTCTCTTATTT+AGG | - | chr1_2:30748746-30748765 | Msa0066740:intron | 10.0% |
| !!! | TTTAGTTTAAACTTTAAAAT+TGG | - | chr1_2:30749170-30749189 | Msa0066740:intron | 10.0% |
| !!! | ATTTCAAAATTAAGATTTTA+AGG | + | chr1_2:30749850-30749869 | None:intergenic | 10.0% |
| !! | AAATATGTTAAAACATTATA+AGG | - | chr1_2:30750459-30750478 | Msa0066740:intron | 10.0% |
| !! | ATTTATTGTTTGAAAATTGA+TGG | - | chr1_2:30745018-30745037 | Msa0066740:CDS | 15.0% |
| !! | TTTATTGTTTGAAAATTGAT+GGG | - | chr1_2:30745019-30745038 | Msa0066740:CDS | 15.0% |
| !!! | AAAAATTAAATTTTGTGAGA+TGG | - | chr1_2:30745053-30745072 | Msa0066740:CDS | 15.0% |
| !!! | AAAATTAAATTTTGTGAGAT+GGG | - | chr1_2:30745054-30745073 | Msa0066740:CDS | 15.0% |
| !! | ACATAAAAAATAAAAAGAGA+GGG | + | chr1_2:30746718-30746737 | None:intergenic | 15.0% |
| !! | AACATAAAAAATAAAAAGAG+AGG | + | chr1_2:30746719-30746738 | None:intergenic | 15.0% |
| !! | CCCTAATAATAATAATAATA+AGG | + | chr1_2:30746978-30746997 | None:intergenic | 15.0% |
| !! | AAAACATTAGAAATTAGATT+TGG | + | chr1_2:30747446-30747465 | None:intergenic | 15.0% |
| !!! | ATTATACTATCAACAAATTT+TGG | + | chr1_2:30747565-30747584 | None:intergenic | 15.0% |
| !!! | TTGTTGATAGTATAATTATT+AGG | - | chr1_2:30747569-30747588 | Msa0066740:CDS | 15.0% |
| !! | AATAAGAGAATTAATTAATG+GGG | + | chr1_2:30748745-30748764 | None:intergenic | 15.0% |
| !!! | TAATACTGATAATTGTTTTT+AGG | - | chr1_2:30748921-30748940 | Msa0066740:intron | 15.0% |
| !!! | GCAATTTTAATTAAATTTTG+TGG | - | chr1_2:30748961-30748980 | Msa0066740:intron | 15.0% |
| !! | AGATTAAAAATTACAATGAA+AGG | + | chr1_2:30750693-30750712 | None:intergenic | 15.0% |
| !! | TCAAATCAAATCAAATCAAA+AGG | + | chr1_2:30744694-30744713 | None:intergenic | 20.0% |
| !!! | ATTTTGTACTTTTTCTTCAA+TGG | + | chr1_2:30744744-30744763 | None:intergenic | 20.0% |
| !!! | TAGTTGAAGTATATTTTATG+AGG | - | chr1_2:30745204-30745223 | Msa0066740:CDS | 20.0% |
| !!! | TATTTTATGAGGATTAGATT+TGG | - | chr1_2:30745215-30745234 | Msa0066740:CDS | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | - | chr1_2:30745377-30745396 | Msa0066740:intron | 20.0% |
| !! | GATTAATTAACTAGAACTAT+TGG | - | chr1_2:30745757-30745776 | Msa0066740:CDS | 20.0% |
| !! | TTGTGTTAACATAGAAAAAA+GGG | - | chr1_2:30746312-30746331 | Msa0066740:intron | 20.0% |
| !!! | GTATTGCTTTTGAATAAAAT+TGG | - | chr1_2:30746364-30746383 | Msa0066740:intron | 20.0% |
| !! | TTGTTTGTATAATTAAAGTG+AGG | - | chr1_2:30746824-30746843 | Msa0066740:intron | 20.0% |
| !! | ACAATTAAAAAATTGGGTAT+TGG | - | chr1_2:30747377-30747396 | Msa0066740:intron | 20.0% |
| !! | ATAATCACTAAAATGTAGAA+TGG | + | chr1_2:30748341-30748360 | None:intergenic | 20.0% |
| !! | ACTTCTAGTATTACAATTTA+TGG | - | chr1_2:30748389-30748408 | Msa0066740:intron | 20.0% |
| !! | ATAAGAGAATTAATTAATGG+GGG | + | chr1_2:30748744-30748763 | None:intergenic | 20.0% |
| !! | ATAATTTCTGCATAAGAAAA+TGG | + | chr1_2:30748837-30748856 | None:intergenic | 20.0% |
| !!! | TAAAAGTACAGATAAAAACT+AGG | + | chr1_2:30749464-30749483 | None:intergenic | 20.0% |
| !! | TAATTACTAAAGAGAACAAT+AGG | + | chr1_2:30749621-30749640 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTACTTTCACTTT+CGG | + | chr1_2:30750178-30750197 | None:intergenic | 20.0% |
| !! | AATAGTGAAACTTCATTTAT+TGG | - | chr1_2:30750325-30750344 | Msa0066740:intron | 20.0% |
| !! | ATAGTGAAACTTCATTTATT+GGG | - | chr1_2:30750326-30750345 | Msa0066740:intron | 20.0% |
| !!! | TTAATATTCGATTTGATTGA+TGG | - | chr1_2:30750565-30750584 | Msa0066740:intron | 20.0% |
| !!! | TAATATTCGATTTGATTGAT+GGG | - | chr1_2:30750566-30750585 | Msa0066740:intron | 20.0% |
| !! | ACAAAATGAGAAGTTATATA+CGG | - | chr1_2:30750932-30750951 | Msa0066740:intron | 20.0% |
| !! | TTGAATTCTAAACACTATAA+AGG | + | chr1_2:30751530-30751549 | None:intergenic | 20.0% |
| ! | TCAAATCAAATCAAAAGGAT+TGG | + | chr1_2:30744689-30744708 | None:intergenic | 25.0% |
| ! | ACTTATAGATAAGCTTTCTA+TGG | + | chr1_2:30745335-30745354 | None:intergenic | 25.0% |
| ! | CAGCATTTGTGAAATTAATT+GGG | + | chr1_2:30745462-30745481 | None:intergenic | 25.0% |
| ! | TCAGCATTTGTGAAATTAAT+TGG | + | chr1_2:30745463-30745482 | None:intergenic | 25.0% |
| ! | CTAGATAAGTCAATCTAAAT+AGG | - | chr1_2:30745488-30745507 | Msa0066740:intron | 25.0% |
| ! | AAAGAATAGTATTACCATAC+AGG | + | chr1_2:30745907-30745926 | None:intergenic | 25.0% |
| ! | GTTGTGTTAACATAGAAAAA+AGG | - | chr1_2:30746311-30746330 | Msa0066740:intron | 25.0% |
| ! | TGAAAAAAATATTCCCAGAA+GGG | + | chr1_2:30746422-30746441 | None:intergenic | 25.0% |
| ! | ATGAAAAAAATATTCCCAGA+AGG | + | chr1_2:30746423-30746442 | None:intergenic | 25.0% |
| ! | TGCAAGTGTTCTTATAAATA+TGG | - | chr1_2:30746756-30746775 | Msa0066740:intron | 25.0% |
| !! | GGATGTTATCAATACTATTT+TGG | - | chr1_2:30746930-30746949 | Msa0066740:intron | 25.0% |
| !!! | TCTATTTTTAACTCCTTAAC+CGG | - | chr1_2:30747785-30747804 | Msa0066740:intron | 25.0% |
| ! | ATAATAAGAGTTATGCTAAC+CGG | + | chr1_2:30747824-30747843 | None:intergenic | 25.0% |
| ! | ATATCTTGTAAAATTGACGA+GGG | + | chr1_2:30748001-30748020 | None:intergenic | 25.0% |
| ! | TATATCTTGTAAAATTGACG+AGG | + | chr1_2:30748002-30748021 | None:intergenic | 25.0% |
| ! | TCAGTGTTATGTAATTTCTA+TGG | - | chr1_2:30748039-30748058 | Msa0066740:intron | 25.0% |
| ! | TGCATAAAGAAACAAACAAA+TGG | + | chr1_2:30748170-30748189 | None:intergenic | 25.0% |
| !! | CTATTTTGCCGTAATTATTT+TGG | - | chr1_2:30748419-30748438 | Msa0066740:intron | 25.0% |
| ! | AGACAAAGCCAAAATAATTA+CGG | + | chr1_2:30748430-30748449 | None:intergenic | 25.0% |
| !! | TCTTATTTAGGTCTTCATAT+TGG | - | chr1_2:30748758-30748777 | Msa0066740:intron | 25.0% |
| ! | AAAACATGTATAGAATCTCA+AGG | + | chr1_2:30749085-30749104 | None:intergenic | 25.0% |
| ! | GATAATAGGTTACTAGTATT+GGG | + | chr1_2:30749118-30749137 | None:intergenic | 25.0% |
| ! | AGATAATAGGTTACTAGTAT+TGG | + | chr1_2:30749119-30749138 | None:intergenic | 25.0% |
| ! | ACTCAAAAGGTAAAGATAAT+AGG | + | chr1_2:30749132-30749151 | None:intergenic | 25.0% |
| ! | CAATATATTTAGCACTCAAA+AGG | + | chr1_2:30749145-30749164 | None:intergenic | 25.0% |
| !! | TTTTTGTGGAATTGAAACTA+AGG | - | chr1_2:30749208-30749227 | Msa0066740:intron | 25.0% |
| !! | TTTTGTGGAATTGAAACTAA+GGG | - | chr1_2:30749209-30749228 | Msa0066740:intron | 25.0% |
| ! | GGTCTTTATTCTTTAATCAA+CGG | + | chr1_2:30749401-30749420 | None:intergenic | 25.0% |
| ! | TCATAAATCAAATTTCAACC+AGG | + | chr1_2:30749437-30749456 | None:intergenic | 25.0% |
| !!! | CTATTACACTATTTTTTCTC+TGG | - | chr1_2:30749485-30749504 | Msa0066740:intron | 25.0% |
| !!! | ATACATGTTTCTTTTGAAGT+TGG | - | chr1_2:30750127-30750146 | Msa0066740:CDS | 25.0% |
| !!! | TTCTTTTGAAGTTGGAAATT+AGG | - | chr1_2:30750135-30750154 | Msa0066740:CDS | 25.0% |
| ! | ATTTATAATTGCACTGTTTC+AGG | - | chr1_2:30750196-30750215 | Msa0066740:intron | 25.0% |
| !! | CAATCAAAATCTCAGAATTT+TGG | + | chr1_2:30750624-30750643 | None:intergenic | 25.0% |
| !!! | CAAAATTCTGAGATTTTGAT+TGG | - | chr1_2:30750622-30750641 | Msa0066740:intron | 25.0% |
| ! | CTGGAAAAACAAATTGAAAA+GGG | + | chr1_2:30750781-30750800 | None:intergenic | 25.0% |
| ! | GTATACTTAATCCAAAATTG+AGG | - | chr1_2:30750961-30750980 | Msa0066740:intron | 25.0% |
| !! | CAAAGTTGATTACTTCAAAA+AGG | - | chr1_2:30751058-30751077 | Msa0066740:intron | 25.0% |
| AAATTGAAGAAGTGGTGAAA+GGG | + | chr1_2:30744645-30744664 | None:intergenic | 30.0% | |
| !!! | TTGAAGCTTTTTAGCTTCTT+TGG | + | chr1_2:30744802-30744821 | None:intergenic | 30.0% |
| GCTAAAAAGCTTCAATTAAG+TGG | - | chr1_2:30744807-30744826 | Msa0066740:three_prime_UTR | 30.0% | |
| TCAATTAAGTGGTAAGAAGA+AGG | - | chr1_2:30744818-30744837 | Msa0066740:three_prime_UTR | 30.0% | |
| TTCAATTCCTGTTCCTTAAA+AGG | + | chr1_2:30744876-30744895 | None:intergenic | 30.0% | |
| ! | TTAGATTTGGTTTCTGCATT+TGG | - | chr1_2:30745228-30745247 | Msa0066740:CDS | 30.0% |
| TTAACCTGATTATCCAAACA+GGG | + | chr1_2:30745254-30745273 | None:intergenic | 30.0% | |
| !! | ACAGCTTAAAAAGCACTTAT+AGG | + | chr1_2:30745300-30745319 | None:intergenic | 30.0% |
| !!! | GTTTTGGAAAGAAAACTAAG+TGG | + | chr1_2:30745589-30745608 | None:intergenic | 30.0% |
| ! | TCAAGATTACAAGTTTTACC+GGG | + | chr1_2:30745619-30745638 | None:intergenic | 30.0% |
| ! | CTCAAGATTACAAGTTTTAC+CGG | + | chr1_2:30745620-30745639 | None:intergenic | 30.0% |
| ! | AAAGCTATTCTTTTGTGATG+CGG | - | chr1_2:30745837-30745856 | Msa0066740:CDS | 30.0% |
| TAACTCCAATTCAGTTGAAA+CGG | - | chr1_2:30746031-30746050 | Msa0066740:intron | 30.0% | |
| TTTCCATAGATAGTTCAGAT+AGG | - | chr1_2:30746203-30746222 | Msa0066740:CDS | 30.0% | |
| TTCCATAGATAGTTCAGATA+GGG | - | chr1_2:30746204-30746223 | Msa0066740:CDS | 30.0% | |
| TTAACATAGAAAAAAGGGTG+AGG | - | chr1_2:30746317-30746336 | Msa0066740:intron | 30.0% | |
| AAGCAATACATGACGTTTAT+GGG | + | chr1_2:30746353-30746372 | None:intergenic | 30.0% | |
| AAAGCAATACATGACGTTTA+TGG | + | chr1_2:30746354-30746373 | None:intergenic | 30.0% | |
| AACAGCAAAAATCAAACCTA+GGG | - | chr1_2:30746555-30746574 | Msa0066740:intron | 30.0% | |
| !!! | TGATTTTTTTAGATCTCCCT+AGG | + | chr1_2:30746574-30746593 | None:intergenic | 30.0% |
| TTGCAATTAAGTGATTGTCT+CGG | - | chr1_2:30746608-30746627 | Msa0066740:intron | 30.0% | |
| !! | ATCAGAGATGTTACTTTATG+TGG | - | chr1_2:30746875-30746894 | Msa0066740:intron | 30.0% |
| !! | TCAGAGATGTTACTTTATGT+GGG | - | chr1_2:30746876-30746895 | Msa0066740:intron | 30.0% |
| CATGGAAAGAGAAAACAAAA+CGG | - | chr1_2:30747315-30747334 | Msa0066740:intron | 30.0% | |
| TTGGAGTTGTGTATCTAATA+AGG | + | chr1_2:30747427-30747446 | None:intergenic | 30.0% | |
| TTCGCATTATGTCAAGAATT+CGG | + | chr1_2:30747652-30747671 | None:intergenic | 30.0% | |
| AGGAGAAACATGAATGATAA+GGG | + | chr1_2:30747965-30747984 | None:intergenic | 30.0% | |
| AAGGAGAAACATGAATGATA+AGG | + | chr1_2:30747966-30747985 | None:intergenic | 30.0% | |
| TCTTTATGCATGCATGAATT+TGG | - | chr1_2:30748180-30748199 | Msa0066740:intron | 30.0% | |
| AATTTGGCACTTGTATGTTT+GGG | - | chr1_2:30748196-30748215 | Msa0066740:intron | 30.0% | |
| GAAGTGAAGTTACAAGAATT+GGG | + | chr1_2:30748374-30748393 | None:intergenic | 30.0% | |
| AGAAGTGAAGTTACAAGAAT+TGG | + | chr1_2:30748375-30748394 | None:intergenic | 30.0% | |
| TTTCTGCATAAGAAAATGGA+GGG | + | chr1_2:30748833-30748852 | None:intergenic | 30.0% | |
| ATTTCTGCATAAGAAAATGG+AGG | + | chr1_2:30748834-30748853 | None:intergenic | 30.0% | |
| GTATAGAATCTCAAGGTAAA+GGG | + | chr1_2:30749078-30749097 | None:intergenic | 30.0% | |
| TGTATAGAATCTCAAGGTAA+AGG | + | chr1_2:30749079-30749098 | None:intergenic | 30.0% | |
| TCTTTCAAATAAGAACTAGG+TGG | + | chr1_2:30749305-30749324 | None:intergenic | 30.0% | |
| ! | ACCTAGTTCTTATTTGAAAG+AGG | - | chr1_2:30749304-30749323 | Msa0066740:intron | 30.0% |
| ACCTCTTTCAAATAAGAACT+AGG | + | chr1_2:30749308-30749327 | None:intergenic | 30.0% | |
| AAAGAGGTTACATGAAGTTT+GGG | - | chr1_2:30749320-30749339 | Msa0066740:intron | 30.0% | |
| AAAGATCCATCGATATAGTA+AGG | - | chr1_2:30749351-30749370 | Msa0066740:intron | 30.0% | |
| AAGATCCATCGATATAGTAA+GGG | - | chr1_2:30749352-30749371 | Msa0066740:intron | 30.0% | |
| CAATTAACTAACTAGAAAGC+AGG | + | chr1_2:30749710-30749729 | None:intergenic | 30.0% | |
| ! | GGAAGTCTAATCCTTTTTAT+TGG | - | chr1_2:30749891-30749910 | Msa0066740:CDS | 30.0% |
| TCATCAACTGAATCAAAACT+TGG | + | chr1_2:30749982-30750001 | None:intergenic | 30.0% | |
| !! | AGAAAACTCTGAAACTATCT+TGG | + | chr1_2:30750278-30750297 | None:intergenic | 30.0% |
| ! | GATAGTTTCAGAGTTTTCTA+AGG | - | chr1_2:30750279-30750298 | Msa0066740:intron | 30.0% |
| TAAGGAGTTTAACATTGATG+AGG | - | chr1_2:30750297-30750316 | Msa0066740:intron | 30.0% | |
| ! | ACATTATAAGGAAAGTGTGT+TGG | - | chr1_2:30750471-30750490 | Msa0066740:intron | 30.0% |
| ! | AAATTGACACGCATCTATTT+TGG | - | chr1_2:30750494-30750513 | Msa0066740:intron | 30.0% |
| ! | CAAAATCTCAGAATTTTGGA+GGG | + | chr1_2:30750620-30750639 | None:intergenic | 30.0% |
| ! | TCAAAATCTCAGAATTTTGG+AGG | + | chr1_2:30750621-30750640 | None:intergenic | 30.0% |
| AACACACTACAAACTGAATA+GGG | + | chr1_2:30750734-30750753 | None:intergenic | 30.0% | |
| TAACACACTACAAACTGAAT+AGG | + | chr1_2:30750735-30750754 | None:intergenic | 30.0% | |
| CCTGGAAAAACAAATTGAAA+AGG | + | chr1_2:30750782-30750801 | None:intergenic | 30.0% | |
| !! | CCTTTTCAATTTGTTTTTCC+AGG | - | chr1_2:30750779-30750798 | Msa0066740:intron | 30.0% |
| ATCTATGGAAAGTGATAAAG+AGG | - | chr1_2:30750872-30750891 | Msa0066740:intron | 30.0% | |
| AAATGAGAAGTTATATACGG+CGG | - | chr1_2:30750935-30750954 | Msa0066740:intron | 30.0% | |
| AGAGAAGAAGAAAAAGAAGA+AGG | - | chr1_2:30750989-30751008 | Msa0066740:intron | 30.0% | |
| CATAAATTTAGACGGATGTA+AGG | - | chr1_2:30751199-30751218 | Msa0066740:intron | 30.0% | |
| !! | CCAAAACTTTGTTTCTGTAT+TGG | + | chr1_2:30751310-30751329 | None:intergenic | 30.0% |
| ! | CCAATACAGAAACAAAGTTT+TGG | - | chr1_2:30751307-30751326 | Msa0066740:CDS | 30.0% |
| GAACTCAGTCAAAAATATCT+GGG | + | chr1_2:30751376-30751395 | None:intergenic | 30.0% | |
| TGAACTCAGTCAAAAATATC+TGG | + | chr1_2:30751377-30751396 | None:intergenic | 30.0% | |
| GCTTAATCCAAATTGTTGAA+GGG | + | chr1_2:30751407-30751426 | None:intergenic | 30.0% | |
| TGCTTAATCCAAATTGTTGA+AGG | + | chr1_2:30751408-30751427 | None:intergenic | 30.0% | |
| !! | TTTTAAGCACTTGTTAGTTC+CGG | - | chr1_2:30751437-30751456 | Msa0066740:intron | 30.0% |
| GAAATGCCAAAAATGCTTTA+AGG | - | chr1_2:30751460-30751479 | Msa0066740:intron | 30.0% | |
| AACCCTTTCAAACCCTAAAA+TGG | - | chr1_2:30744594-30744613 | Msa0066740:three_prime_UTR | 35.0% | |
| !!! | CACCATTTTAGGGTTTGAAA+GGG | + | chr1_2:30744599-30744618 | None:intergenic | 35.0% |
| !!! | TCACCATTTTAGGGTTTGAA+AGG | + | chr1_2:30744600-30744619 | None:intergenic | 35.0% |
| ! | TGCTTCTCTTCACCATTTTA+GGG | + | chr1_2:30744609-30744628 | None:intergenic | 35.0% |
| ! | TTGCTTCTCTTCACCATTTT+AGG | + | chr1_2:30744610-30744629 | None:intergenic | 35.0% |
| GAAATTGAAGAAGTGGTGAA+AGG | + | chr1_2:30744646-30744665 | None:intergenic | 35.0% | |
| CGATGATGAAATTGAAGAAG+TGG | + | chr1_2:30744653-30744672 | None:intergenic | 35.0% | |
| ATCCTGGTATTCCAAATGAT+TGG | - | chr1_2:30744850-30744869 | Msa0066740:intron | 35.0% | |
| !!! | TCCAAATGATTGGCCTTTTA+AGG | - | chr1_2:30744860-30744879 | Msa0066740:intron | 35.0% |
| TCCTTAAAAGGCCAATCATT+TGG | + | chr1_2:30744864-30744883 | None:intergenic | 35.0% | |
| AGAAAGAAGCTCGTAAAGAA+AGG | - | chr1_2:30744943-30744962 | Msa0066740:intron | 35.0% | |
| GAAAGAAGCTCGTAAAGAAA+GGG | - | chr1_2:30744944-30744963 | Msa0066740:intron | 35.0% | |
| CTTAACCTGATTATCCAAAC+AGG | + | chr1_2:30745255-30745274 | None:intergenic | 35.0% | |
| CGGTAAAACTTGTAATCTTG+AGG | - | chr1_2:30745618-30745637 | Msa0066740:intron | 35.0% | |
| GAACTAAGCTCAAGTTACTT+TGG | - | chr1_2:30745640-30745659 | Msa0066740:intron | 35.0% | |
| TGTTATGTGTTATGCCTGTA+TGG | - | chr1_2:30745890-30745909 | Msa0066740:CDS | 35.0% | |
| ! | TCATGTCTAACTCTTGTTTC+AGG | - | chr1_2:30745971-30745990 | Msa0066740:intron | 35.0% |
| !! | TTATTAGTCTTCGCAACAGT+AGG | + | chr1_2:30746083-30746102 | None:intergenic | 35.0% |
| ACTGTTGCGAAGACTAATAA+AGG | - | chr1_2:30746083-30746102 | Msa0066740:CDS | 35.0% | |
| AATAACCTGATCCAAATCAC+TGG | + | chr1_2:30746236-30746255 | None:intergenic | 35.0% | |
| AATATTCCCAGAAGGGAAAA+GGG | + | chr1_2:30746415-30746434 | None:intergenic | 35.0% | |
| AAATATTCCCAGAAGGGAAA+AGG | + | chr1_2:30746416-30746435 | None:intergenic | 35.0% | |
| CAACAGCAAAAATCAAACCT+AGG | - | chr1_2:30746554-30746573 | Msa0066740:intron | 35.0% | |
| CTGGGTTAAGGAGTTATAAA+AGG | - | chr1_2:30747024-30747043 | Msa0066740:intron | 35.0% | |
| CAACGTACTAGAAAACGAAT+TGG | + | chr1_2:30747168-30747187 | None:intergenic | 35.0% | |
| TGTATCTAATAAGGTCACGT+GGG | + | chr1_2:30747418-30747437 | None:intergenic | 35.0% | |
| GAATTTGGCACTTGTATGTT+TGG | - | chr1_2:30748195-30748214 | Msa0066740:intron | 35.0% | |
| !! | GCATAACATGAAAAGTATCG+TGG | + | chr1_2:30748233-30748252 | None:intergenic | 35.0% |
| ! | CGATACTTTTCATGTTATGC+TGG | - | chr1_2:30748233-30748252 | Msa0066740:intron | 35.0% |
| AGACTACTCTTACCAACATT+GGG | + | chr1_2:30748495-30748514 | None:intergenic | 35.0% | |
| AAGACTACTCTTACCAACAT+TGG | + | chr1_2:30748496-30748515 | None:intergenic | 35.0% | |
| ! | GGACAAAAATGTTAAGTTGC+TGG | - | chr1_2:30748596-30748615 | Msa0066740:intron | 35.0% |
| GAGAATTAATTAATGGGGGA+AGG | + | chr1_2:30748740-30748759 | None:intergenic | 35.0% | |
| ! | TGGAGTAATGCTACTTGAAA+TGG | - | chr1_2:30748778-30748797 | Msa0066740:intron | 35.0% |
| ! | GTAATGCTACTTGAAATGGA+TGG | - | chr1_2:30748782-30748801 | Msa0066740:intron | 35.0% |
| CAGTATTAGAGTCTAGAAGA+GGG | + | chr1_2:30748909-30748928 | None:intergenic | 35.0% | |
| TCAGTATTAGAGTCTAGAAG+AGG | + | chr1_2:30748910-30748929 | None:intergenic | 35.0% | |
| GTTATCATGATCTCAGTTGA+AGG | - | chr1_2:30749044-30749063 | Msa0066740:intron | 35.0% | |
| ! | ATAGGTTACTAGTATTGGGA+GGG | + | chr1_2:30749114-30749133 | None:intergenic | 35.0% |
| ! | AATAGGTTACTAGTATTGGG+AGG | + | chr1_2:30749115-30749134 | None:intergenic | 35.0% |
| !!! | AGGCTTGGCTTGATTTTTTT+GGG | + | chr1_2:30749259-30749278 | None:intergenic | 35.0% |
| GAAAGAGGTTACATGAAGTT+TGG | - | chr1_2:30749319-30749338 | Msa0066740:intron | 35.0% | |
| AAGAGGTTACATGAAGTTTG+GGG | - | chr1_2:30749321-30749340 | Msa0066740:intron | 35.0% | |
| CAACGGAACTTGAATACAAT+GGG | + | chr1_2:30749384-30749403 | None:intergenic | 35.0% | |
| TCAACGGAACTTGAATACAA+TGG | + | chr1_2:30749385-30749404 | None:intergenic | 35.0% | |
| ! | TAGAAGCACATGTAATGAGA+GGG | + | chr1_2:30749519-30749538 | None:intergenic | 35.0% |
| ! | TTAGAAGCACATGTAATGAG+AGG | + | chr1_2:30749520-30749539 | None:intergenic | 35.0% |
| AAGTCATGTCTTAGTGCTTT+AGG | + | chr1_2:30749561-30749580 | None:intergenic | 35.0% | |
| ATGGATGAAAAGATAGGATC+AGG | + | chr1_2:30749650-30749669 | None:intergenic | 35.0% | |
| ! | GATCCTATCTTTTCATCCAT+CGG | - | chr1_2:30749650-30749669 | Msa0066740:CDS | 35.0% |
| GTTATGAAATGAACTTCCGA+TGG | + | chr1_2:30749669-30749688 | None:intergenic | 35.0% | |
| AAGCAGGATCAATATTGTGA+AGG | + | chr1_2:30749694-30749713 | None:intergenic | 35.0% | |
| !!! | ATTTTGAAATCCCGACTTTC+AGG | - | chr1_2:30749860-30749879 | Msa0066740:CDS | 35.0% |
| CACTGCATTGTCCAATAAAA+AGG | + | chr1_2:30749905-30749924 | None:intergenic | 35.0% | |
| GTTCTTCATGACTGGAATAT+AGG | - | chr1_2:30750081-30750100 | Msa0066740:CDS | 35.0% | |
| TCTTACTTTCACTTTCGGAA+AGG | + | chr1_2:30750173-30750192 | None:intergenic | 35.0% | |
| ACATGATCTAACTCAACAGT+AGG | + | chr1_2:30750361-30750380 | None:intergenic | 35.0% | |
| TTGTCTCATCAAAGATGAGA+GGG | + | chr1_2:30750402-30750421 | None:intergenic | 35.0% | |
| ATTGTCTCATCAAAGATGAG+AGG | + | chr1_2:30750403-30750422 | None:intergenic | 35.0% | |
| CTTTGATGAGACAATGTTAG+AGG | - | chr1_2:30750408-30750427 | Msa0066740:intron | 35.0% | |
| ! | TTTTGGATGGTCTGTTTGTA+TGG | - | chr1_2:30750511-30750530 | Msa0066740:intron | 35.0% |
| AGGGAGCTAAAACTAACTTA+AGG | + | chr1_2:30750601-30750620 | None:intergenic | 35.0% | |
| !! | TAGGGTCTCTTTTGATTCAA+AGG | + | chr1_2:30750716-30750735 | None:intergenic | 35.0% |
| AAGTTGGCAAAACAAGATGA+AGG | - | chr1_2:30750816-30750835 | Msa0066740:intron | 35.0% | |
| TCATTGTCATCAACATTCTC+AGG | + | chr1_2:30750843-30750862 | None:intergenic | 35.0% | |
| !! | GAATGTTGATGACAATGATG+AGG | - | chr1_2:30750845-30750864 | Msa0066740:intron | 35.0% |
| CAATGATGAGGATGAATCTA+TGG | - | chr1_2:30750857-30750876 | Msa0066740:intron | 35.0% | |
| TGATAAAGAGGATGTTAGCA+AGG | - | chr1_2:30750884-30750903 | Msa0066740:intron | 35.0% | |
| AAGTCATAATCACCATCCAT+AGG | + | chr1_2:30751038-30751057 | None:intergenic | 35.0% | |
| TTACTTCAAAAAGGACACGA+TGG | - | chr1_2:30751067-30751086 | Msa0066740:intron | 35.0% | |
| TGCGCACACATAAATTTAGA+CGG | - | chr1_2:30751191-30751210 | Msa0066740:intron | 35.0% | |
| AAATTTAGACGGATGTAAGG+TGG | - | chr1_2:30751202-30751221 | Msa0066740:intron | 35.0% | |
| !!! | ACAGAAACAAAGTTTTGGAC+AGG | - | chr1_2:30751312-30751331 | Msa0066740:CDS | 35.0% |
| ! | TTTAAGCACTTGTTAGTTCC+GGG | - | chr1_2:30751438-30751457 | Msa0066740:intron | 35.0% |
| !!! | AAAGCATTTTTGGCATTTCC+CGG | + | chr1_2:30751459-30751478 | None:intergenic | 35.0% |
| ! | TTTAGGGTTTGAAAGGGTTG+CGG | + | chr1_2:30744593-30744612 | None:intergenic | 40.0% |
| TTGCAGAGAGTAAGAGTAAG+AGG | - | chr1_2:30744715-30744734 | Msa0066740:three_prime_UTR | 40.0% | |
| TGCAGAGAGTAAGAGTAAGA+GGG | - | chr1_2:30744716-30744735 | Msa0066740:three_prime_UTR | 40.0% | |
| AAGAAGGTTGAGAAAGATCC+TGG | - | chr1_2:30744834-30744853 | Msa0066740:three_prime_UTR | 40.0% | |
| !!! | TGATTGGCCTTTTAAGGAAC+AGG | - | chr1_2:30744866-30744885 | Msa0066740:intron | 40.0% |
| !! | CTTTCCAAAACTTGTTGTCC+CGG | - | chr1_2:30745598-30745617 | Msa0066740:intron | 40.0% |
| ! | TTTACCGGGACAACAAGTTT+TGG | + | chr1_2:30745605-30745624 | None:intergenic | 40.0% |
| ! | TCTTGTTTCAGGCTCGTAAA+AGG | - | chr1_2:30745982-30746001 | Msa0066740:intron | 40.0% |
| TTGGAGTTATCATCATCCAC+TGG | + | chr1_2:30746020-30746039 | None:intergenic | 40.0% | |
| AGAAGCCGTTTCAACTGAAT+TGG | + | chr1_2:30746039-30746058 | None:intergenic | 40.0% | |
| AGAGTCTGATGTCATACTAG+AGG | - | chr1_2:30746258-30746277 | Msa0066740:intron | 40.0% | |
| TTAACACAACGAGTACCCAA+GGG | + | chr1_2:30746301-30746320 | None:intergenic | 40.0% | |
| ATATTCCCAGAAGGGAAAAG+GGG | + | chr1_2:30746414-30746433 | None:intergenic | 40.0% | |
| TGCATTTGAAAGCGACAGTA+GGG | + | chr1_2:30746529-30746548 | None:intergenic | 40.0% | |
| GAATTATGCAAGAAGCGACA+AGG | - | chr1_2:30746658-30746677 | Msa0066740:intron | 40.0% | |
| CTTGTGATTCACATGCTTCT+TGG | - | chr1_2:30746909-30746928 | Msa0066740:intron | 40.0% | |
| AAATGCTAACTAGTTCCCCT+GGG | - | chr1_2:30746998-30747017 | Msa0066740:intron | 40.0% | |
| GAAAACGAATTGGCACGAAT+TGG | + | chr1_2:30747158-30747177 | None:intergenic | 40.0% | |
| ! | TCTTCCCTGTTTTCTCTTTC+TGG | + | chr1_2:30747230-30747249 | None:intergenic | 40.0% |
| AACAGGGAAGAAGAAGAAGA+TGG | - | chr1_2:30747239-30747258 | Msa0066740:intron | 40.0% | |
| TATCTAATAAGGTCACGTGG+GGG | + | chr1_2:30747416-30747435 | None:intergenic | 40.0% | |
| GTATCTAATAAGGTCACGTG+GGG | + | chr1_2:30747417-30747436 | None:intergenic | 40.0% | |
| GTGTATCTAATAAGGTCACG+TGG | + | chr1_2:30747419-30747438 | None:intergenic | 40.0% | |
| TCACCAAATACGCAATTCGT+CGG | + | chr1_2:30747702-30747721 | None:intergenic | 40.0% | |
| ACGAGGGTTTGTAGAACAAA+AGG | + | chr1_2:30747985-30748004 | None:intergenic | 40.0% | |
| GTGAAGTTACAAGAATTGGG+AGG | + | chr1_2:30748371-30748390 | None:intergenic | 40.0% | |
| CTCAAGACATCAATCACTGT+TGG | - | chr1_2:30748456-30748475 | Msa0066740:intron | 40.0% | |
| ! | GACATCAATCACTGTTGGTT+TGG | - | chr1_2:30748461-30748480 | Msa0066740:intron | 40.0% |
| !! | TCAATCACTGTTGGTTTGGT+TGG | - | chr1_2:30748465-30748484 | Msa0066740:intron | 40.0% |
| ! | TGCTACTTGAAATGGATGGT+TGG | - | chr1_2:30748786-30748805 | Msa0066740:intron | 40.0% |
| GAAAATGGAGGGTTATACAG+AGG | + | chr1_2:30748822-30748841 | None:intergenic | 40.0% | |
| ! | CCAGAAAGGAGCATAAAAGA+TGG | + | chr1_2:30748995-30749014 | None:intergenic | 40.0% |
| ! | CCATCTTTTATGCTCCTTTC+TGG | - | chr1_2:30748992-30749011 | Msa0066740:intron | 40.0% |
| ! | TCCTTTCTGGTCATGTTCTA+GGG | - | chr1_2:30749005-30749024 | Msa0066740:intron | 40.0% |
| CATGATCTCAGTTGAAGGAA+TGG | - | chr1_2:30749049-30749068 | Msa0066740:intron | 40.0% | |
| !!! | TTACCACTGCTTGCTTTTTG+TGG | - | chr1_2:30749194-30749213 | Msa0066740:intron | 40.0% |
| ATTCCACAAAAAGCAAGCAG+TGG | + | chr1_2:30749200-30749219 | None:intergenic | 40.0% | |
| !!! | GGCTTGGCTTGATTTTTTTG+GGG | + | chr1_2:30749258-30749277 | None:intergenic | 40.0% |
| !!! | GAGGCTTGGCTTGATTTTTT+TGG | + | chr1_2:30749260-30749279 | None:intergenic | 40.0% |
| CAAATAAGAACTAGGTGGTG+AGG | + | chr1_2:30749300-30749319 | None:intergenic | 40.0% | |
| TCATGCCCTTACTATATCGA+TGG | + | chr1_2:30749360-30749379 | None:intergenic | 40.0% | |
| ! | TCTTAGTGCTTTAGGCATGT+GGG | + | chr1_2:30749553-30749572 | None:intergenic | 40.0% |
| CTTCCGATGGATGAAAAGAT+AGG | + | chr1_2:30749656-30749675 | None:intergenic | 40.0% | |
| TGATGACTTCCTACAGATTG+TGG | - | chr1_2:30749996-30750015 | Msa0066740:intron | 40.0% | |
| TAACAGTAGCCACAATCTGT+AGG | + | chr1_2:30750008-30750027 | None:intergenic | 40.0% | |
| TACAGATTGTGGCTACTGTT+AGG | - | chr1_2:30750007-30750026 | Msa0066740:intron | 40.0% | |
| ACAGATTGTGGCTACTGTTA+GGG | - | chr1_2:30750008-30750027 | Msa0066740:intron | 40.0% | |
| CAAGAATCGTTCTTCATGAC+TGG | - | chr1_2:30750073-30750092 | Msa0066740:CDS | 40.0% | |
| ! | ACTGGAGGCATGGTATAATA+TGG | + | chr1_2:30750229-30750248 | None:intergenic | 40.0% |
| ATTATACCATGCCTCCAGTT+AGG | - | chr1_2:30750230-30750249 | Msa0066740:intron | 40.0% | |
| TTATACCATGCCTCCAGTTA+GGG | - | chr1_2:30750231-30750250 | Msa0066740:intron | 40.0% | |
| !! | TGACACGCATCTATTTTGGA+TGG | - | chr1_2:30750498-30750517 | Msa0066740:intron | 40.0% |
| TCTGTTTGTATGGAGGGAAA+TGG | - | chr1_2:30750521-30750540 | Msa0066740:intron | 40.0% | |
| TTTGTATGGAGGGAAATGGA+AGG | - | chr1_2:30750525-30750544 | Msa0066740:intron | 40.0% | |
| ACTTAACTGCTTTGTCATCC+TGG | + | chr1_2:30750800-30750819 | None:intergenic | 40.0% | |
| GGATGACAAAGCAGTTAAGT+TGG | - | chr1_2:30750800-30750819 | Msa0066740:intron | 40.0% | |
| AGAGGATGTTAGCAAGGAAA+AGG | - | chr1_2:30750890-30750909 | Msa0066740:intron | 40.0% | |
| TGATGAACAAGTCAACACTG+AGG | - | chr1_2:30751130-30751149 | Msa0066740:intron | 40.0% | |
| !! | GTTGAGGTTGATGCATGATT+TGG | - | chr1_2:30751167-30751186 | Msa0066740:intron | 40.0% |
| TTTGGACAGGTCAAGAATTG+AGG | - | chr1_2:30751325-30751344 | Msa0066740:CDS | 40.0% | |
| CTACTGTCCCTTCAACAATT+TGG | - | chr1_2:30751397-30751416 | Msa0066740:CDS | 40.0% | |
| !! | GCTCAGCCTTAAAGCATTTT+TGG | + | chr1_2:30751469-30751488 | None:intergenic | 40.0% |
| ! | GGCCAATCATTTGGAATACC+AGG | + | chr1_2:30744855-30744874 | None:intergenic | 45.0% |
| AGAACGTGCTCTTGCTGAAT+TGG | - | chr1_2:30744914-30744933 | Msa0066740:intron | 45.0% | |
| TTTCTGCATTTGGCCCTGTT+TGG | - | chr1_2:30745238-30745257 | Msa0066740:CDS | 45.0% | |
| TTGGCCCTGTTTGGATAATC+AGG | - | chr1_2:30745247-30745266 | Msa0066740:CDS | 45.0% | |
| GACAGTCTACTCAGAGATGT+AGG | - | chr1_2:30745859-30745878 | Msa0066740:CDS | 45.0% | |
| GTTTCAGGCTCGTAAAAGGA+AGG | - | chr1_2:30745986-30746005 | Msa0066740:intron | 45.0% | |
| CGCAACAGTAGGAACAGTTT+CGG | + | chr1_2:30746072-30746091 | None:intergenic | 45.0% | |
| GGCCCTATCTGAACTATCTA+TGG | + | chr1_2:30746209-30746228 | None:intergenic | 45.0% | |
| CTGATCCAAATCACTGGCAA+AGG | + | chr1_2:30746230-30746249 | None:intergenic | 45.0% | |
| ! | CTTTGCCAGTGATTTGGATC+AGG | - | chr1_2:30746228-30746247 | Msa0066740:CDS | 45.0% |
| GTTAACACAACGAGTACCCA+AGG | + | chr1_2:30746302-30746321 | None:intergenic | 45.0% | |
| GAAAAAAGGGTGAGGAAAGC+AGG | - | chr1_2:30746325-30746344 | Msa0066740:intron | 45.0% | |
| GAAGGGAAAAGGGGAGAAAA+AGG | + | chr1_2:30746405-30746424 | None:intergenic | 45.0% | |
| ! | TTTTCTCCCCTTTTCCCTTC+TGG | - | chr1_2:30746405-30746424 | Msa0066740:intron | 45.0% |
| ! | TTTCTCCCCTTTTCCCTTCT+GGG | - | chr1_2:30746406-30746425 | Msa0066740:intron | 45.0% |
| ! | ACTTCTCAACTGACTCTCGA+GGG | + | chr1_2:30746481-30746500 | None:intergenic | 45.0% |
| CAGTAGGGAATTCTTCTCGA+AGG | + | chr1_2:30746514-30746533 | None:intergenic | 45.0% | |
| CTGCATTTGAAAGCGACAGT+AGG | + | chr1_2:30746530-30746549 | None:intergenic | 45.0% | |
| GAAATGCTAACTAGTTCCCC+TGG | - | chr1_2:30746997-30747016 | Msa0066740:intron | 45.0% | |
| AATGCTAACTAGTTCCCCTG+GGG | - | chr1_2:30746999-30747018 | Msa0066740:intron | 45.0% | |
| CGAATTGGCACGAATTGGTA+CGG | + | chr1_2:30747153-30747172 | None:intergenic | 45.0% | |
| GTACGTTGAAAGTGACGAAC+CGG | - | chr1_2:30747180-30747199 | Msa0066740:intron | 45.0% | |
| AGCCACCAGAAAGAGAAAAC+AGG | - | chr1_2:30747222-30747241 | Msa0066740:intron | 45.0% | |
| GCCACCAGAAAGAGAAAACA+GGG | - | chr1_2:30747223-30747242 | Msa0066740:intron | 45.0% | |
| ! | TCCCTGTTTTCTCTTTCTGG+TGG | + | chr1_2:30747227-30747246 | None:intergenic | 45.0% |
| GGAAGAAGAAGAAGATGGAG+CGG | - | chr1_2:30747244-30747263 | Msa0066740:intron | 45.0% | |
| !!! | TGGAGCGGTTTTGAAAACAG+CGG | - | chr1_2:30747259-30747278 | Msa0066740:intron | 45.0% |
| !!! | CGGTTTTGAAAACAGCGGAA+GGG | - | chr1_2:30747264-30747283 | Msa0066740:intron | 45.0% |
| ! | AGGGAAAGATGAAGCGGTTT+TGG | - | chr1_2:30747283-30747302 | Msa0066740:intron | 45.0% |
| !!! | AGATGAAGCGGTTTTGGCTT+TGG | - | chr1_2:30747289-30747308 | Msa0066740:intron | 45.0% |
| !!! | GATGAAGCGGTTTTGGCTTT+GGG | - | chr1_2:30747290-30747309 | Msa0066740:intron | 45.0% |
| !! | TATACAGAGTCGGTTCGCTT+GGG | + | chr1_2:30747617-30747636 | None:intergenic | 45.0% |
| TCAAGAATTCGGTACGTGAG+GGG | + | chr1_2:30747641-30747660 | None:intergenic | 45.0% | |
| GTCAAGAATTCGGTACGTGA+GGG | + | chr1_2:30747642-30747661 | None:intergenic | 45.0% | |
| TGTCAAGAATTCGGTACGTG+AGG | + | chr1_2:30747643-30747662 | None:intergenic | 45.0% | |
| ! | GTACCGACGAATTGCGTATT+TGG | - | chr1_2:30747696-30747715 | Msa0066740:intron | 45.0% |
| GGAGATGACTTCAAGTACCT+GGG | + | chr1_2:30748719-30748738 | None:intergenic | 45.0% | |
| AGGAGATGACTTCAAGTACC+TGG | + | chr1_2:30748720-30748739 | None:intergenic | 45.0% | |
| ! | CTCCTTTCTGGTCATGTTCT+AGG | - | chr1_2:30749004-30749023 | Msa0066740:intron | 45.0% |
| GGTTAAAGGCAGCTAAATCG+AGG | + | chr1_2:30749279-30749298 | None:intergenic | 45.0% | |
| GAACTAGGTGGTGAGGTTAA+AGG | + | chr1_2:30749293-30749312 | None:intergenic | 45.0% | |
| ! | AGACCTTGATATGAAGTGCC+TGG | - | chr1_2:30749416-30749435 | Msa0066740:intron | 45.0% |
| CAACCAGGCACTTCATATCA+AGG | + | chr1_2:30749422-30749441 | None:intergenic | 45.0% | |
| ! | CTTAGTGCTTTAGGCATGTG+GGG | + | chr1_2:30749552-30749571 | None:intergenic | 45.0% |
| ! | GTCTTAGTGCTTTAGGCATG+TGG | + | chr1_2:30749554-30749573 | None:intergenic | 45.0% |
| TCCCAATAGAGCCTGAAAGT+CGG | + | chr1_2:30749874-30749893 | None:intergenic | 45.0% | |
| AAGAGATATCAGCACCCTAG+CGG | + | chr1_2:30749950-30749969 | None:intergenic | 45.0% | |
| CAGATTGTGGCTACTGTTAG+GGG | - | chr1_2:30750009-30750028 | Msa0066740:intron | 45.0% | |
| GAAACTATCTTGGCCTCTGA+AGG | + | chr1_2:30750268-30750287 | None:intergenic | 45.0% | |
| AAGATGAGAGGGCAACTTGA+AGG | + | chr1_2:30750391-30750410 | None:intergenic | 45.0% | |
| TGGATGGTCTGTTTGTATGG+AGG | - | chr1_2:30750514-30750533 | Msa0066740:intron | 45.0% | |
| GGATGGTCTGTTTGTATGGA+GGG | - | chr1_2:30750515-30750534 | Msa0066740:intron | 45.0% | |
| TATGGAGGGAAATGGAAGGT+GGG | - | chr1_2:30750529-30750548 | Msa0066740:intron | 45.0% | |
| TGAGAAGTTATATACGGCGG+AGG | - | chr1_2:30750938-30750957 | Msa0066740:intron | 45.0% | |
| GAGAAGTTATATACGGCGGA+GGG | - | chr1_2:30750939-30750958 | Msa0066740:intron | 45.0% | |
| ! | TTCTCTGCTCGCCTCAATTT+TGG | + | chr1_2:30750975-30750994 | None:intergenic | 45.0% |
| ATCCATAGGATCAGATGAGC+TGG | + | chr1_2:30751024-30751043 | None:intergenic | 45.0% | |
| AGCTCATCTGATCCTATGGA+TGG | - | chr1_2:30751023-30751042 | Msa0066740:intron | 45.0% | |
| TCAACCTCAACACCAGACAT+GGG | + | chr1_2:30751158-30751177 | None:intergenic | 45.0% | |
| ATCAACCTCAACACCAGACA+TGG | + | chr1_2:30751159-30751178 | None:intergenic | 45.0% | |
| !! | AAATTTAATATTATATTTCA+TGG | - | chr1_2:30745148-30745167 | Msa0066740:CDS | 5.0% |
| !! | AAAAAAAAAAAAAAAACTTA+TGG | - | chr1_2:30745420-30745439 | Msa0066740:intron | 5.0% |
| !! | AAAAAAACAATTAAAAAATT+GGG | - | chr1_2:30747371-30747390 | Msa0066740:intron | 5.0% |
| !!! | ATATTTTGATATAAAAAAAA+AGG | - | chr1_2:30747478-30747497 | Msa0066740:CDS | 5.0% |
| !!! | AAAAATAAAAATACAAATTT+TGG | + | chr1_2:30747533-30747552 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTACTA+TGG | - | chr1_2:30749588-30749607 | Msa0066740:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTTACTAT+GGG | - | chr1_2:30749589-30749608 | Msa0066740:CDS | 5.0% |
| TCAGGCTCGTAAAAGGAAGG+CGG | - | chr1_2:30745989-30746008 | Msa0066740:intron | 50.0% | |
| TAGGGCCTTTGCCAGTGATT+TGG | - | chr1_2:30746222-30746241 | Msa0066740:CDS | 50.0% | |
| TACTAGAGGTCCTTGATGCC+CGG | - | chr1_2:30746272-30746291 | Msa0066740:intron | 50.0% | |
| ! | CACTTCTCAACTGACTCTCG+AGG | + | chr1_2:30746482-30746501 | None:intergenic | 50.0% |
| CTCGAGAGTCAGTTGAGAAG+TGG | - | chr1_2:30746480-30746499 | Msa0066740:intron | 50.0% | |
| !! | ATTGGTTCGCGGTTCTCATG+TGG | + | chr1_2:30747103-30747122 | None:intergenic | 50.0% |
| TACGGAAAAGAACCGCGAAC+CGG | + | chr1_2:30747135-30747154 | None:intergenic | 50.0% | |
| TTGAAAGTGACGAACCGGTG+AGG | - | chr1_2:30747185-30747204 | Msa0066740:intron | 50.0% | |
| GAACCGGTGAGGAAGAAGAT+CGG | - | chr1_2:30747196-30747215 | Msa0066740:intron | 50.0% | |
| !!! | GCGGTTTTGAAAACAGCGGA+AGG | - | chr1_2:30747263-30747282 | Msa0066740:intron | 50.0% |
| AGCGGAAGGGAAAGATGAAG+CGG | - | chr1_2:30747277-30747296 | Msa0066740:intron | 50.0% | |
| !!! | CGGTTTTGGCTTTGGGAACA+TGG | - | chr1_2:30747297-30747316 | Msa0066740:intron | 50.0% |
| !! | GTATACAGAGTCGGTTCGCT+TGG | + | chr1_2:30747618-30747637 | None:intergenic | 50.0% |
| CAAGAATTCGGTACGTGAGG+GGG | + | chr1_2:30747640-30747659 | None:intergenic | 50.0% | |
| ATACGCAATTCGTCGGTACG+TGG | + | chr1_2:30747695-30747714 | None:intergenic | 50.0% | |
| TATGCTAACCGGTGCCTCAT+GGG | + | chr1_2:30747813-30747832 | None:intergenic | 50.0% | |
| TTATGCTAACCGGTGCCTCA+TGG | + | chr1_2:30747814-30747833 | None:intergenic | 50.0% | |
| TTGGTTGGACTGCCCAATGT+TGG | - | chr1_2:30748480-30748499 | Msa0066740:intron | 50.0% | |
| !! | TAGCACTGACATCGACAGCA+TGG | + | chr1_2:30748539-30748558 | None:intergenic | 50.0% |
| TCGATGTCAGTGCTAGTGCT+GGG | - | chr1_2:30748544-30748563 | Msa0066740:intron | 50.0% | |
| ! | GTTAAGTTGCTGGATTGCCC+TGG | - | chr1_2:30748606-30748625 | Msa0066740:intron | 50.0% |
| AGTCCAGCATGACAACACCA+GGG | + | chr1_2:30748626-30748645 | None:intergenic | 50.0% | |
| TTAGCTGATCCAGTTAGCCC+AGG | - | chr1_2:30748699-30748718 | Msa0066740:intron | 50.0% | |
| CTTCAAGTACCTGGGCTAAC+TGG | + | chr1_2:30748711-30748730 | None:intergenic | 50.0% | |
| GCCCTAGAACATGACCAGAA+AGG | + | chr1_2:30749009-30749028 | None:intergenic | 50.0% | |
| AAGGCAGCTAAATCGAGGCT+TGG | + | chr1_2:30749274-30749293 | None:intergenic | 50.0% | |
| TCCCGACTTTCAGGCTCTAT+TGG | - | chr1_2:30749869-30749888 | Msa0066740:CDS | 50.0% | |
| CCCAATAGAGCCTGAAAGTC+GGG | + | chr1_2:30749873-30749892 | None:intergenic | 50.0% | |
| CCCGACTTTCAGGCTCTATT+GGG | - | chr1_2:30749870-30749889 | Msa0066740:CDS | 50.0% | |
| AGAGATATCAGCACCCTAGC+GGG | + | chr1_2:30749949-30749968 | None:intergenic | 50.0% | |
| TGTTAGGGGCAAGCTCAAGA+AGG | - | chr1_2:30750023-30750042 | Msa0066740:intron | 50.0% | |
| GTTAGGGGCAAGCTCAAGAA+GGG | - | chr1_2:30750024-30750043 | Msa0066740:intron | 50.0% | |
| TTGATCCCTAACTGGAGGCA+TGG | + | chr1_2:30750239-30750258 | None:intergenic | 50.0% | |
| ATGCCTCCAGTTAGGGATCA+AGG | - | chr1_2:30750238-30750257 | Msa0066740:intron | 50.0% | |
| TCTCCTTGATCCCTAACTGG+AGG | + | chr1_2:30750244-30750263 | None:intergenic | 50.0% | |
| GGTTCTCCTTGATCCCTAAC+TGG | + | chr1_2:30750247-30750266 | None:intergenic | 50.0% | |
| GGATCAAGGAGAACCTTCAG+AGG | - | chr1_2:30750252-30750271 | Msa0066740:intron | 50.0% | |
| GTATGGAGGGAAATGGAAGG+TGG | - | chr1_2:30750528-30750547 | Msa0066740:intron | 50.0% | |
| AGCCAGCTCATCTGATCCTA+TGG | - | chr1_2:30751019-30751038 | Msa0066740:intron | 50.0% | |
| AAGGACACGATGGATGCTGA+CGG | - | chr1_2:30751077-30751096 | Msa0066740:intron | 50.0% | |
| AACACTGAGGTTCCCATGTC+TGG | - | chr1_2:30751143-30751162 | Msa0066740:intron | 50.0% | |
| CAGGCTCGTAAAAGGAAGGC+GGG | - | chr1_2:30745990-30746009 | Msa0066740:intron | 55.0% | |
| AGGCTCGTAAAAGGAAGGCG+GGG | - | chr1_2:30745991-30746010 | Msa0066740:intron | 55.0% | |
| ACTAGAGGTCCTTGATGCCC+GGG | - | chr1_2:30746273-30746292 | Msa0066740:intron | 55.0% | |
| AACGAGTACCCAAGGGATCC+CGG | + | chr1_2:30746294-30746313 | None:intergenic | 55.0% | |
| !! | GGTACGCACGAATTGGTTCG+CGG | + | chr1_2:30747114-30747133 | None:intergenic | 55.0% |
| GCGAACCAATTCGTGCGTAC+CGG | - | chr1_2:30747113-30747132 | Msa0066740:intron | 55.0% | |
| !! | AATTCGTGCGTACCGGTTCG+CGG | - | chr1_2:30747120-30747139 | Msa0066740:intron | 55.0% |
| GCTCCGATCTTCTTCCTCAC+CGG | + | chr1_2:30747202-30747221 | None:intergenic | 55.0% | |
| ! | CGTGAGGGGGTATACAGAGT+CGG | + | chr1_2:30747627-30747646 | None:intergenic | 55.0% |
| GTCGATGTCAGTGCTAGTGC+TGG | - | chr1_2:30748543-30748562 | Msa0066740:intron | 55.0% | |
| !! | TTGCCCTGGTGTTGTCATGC+TGG | - | chr1_2:30748620-30748639 | Msa0066740:intron | 55.0% |
| GAGTCCAGCATGACAACACC+AGG | + | chr1_2:30748627-30748646 | None:intergenic | 55.0% | |
| TTCTCAAGCTCTGTCCCGCT+AGG | - | chr1_2:30749932-30749951 | Msa0066740:CDS | 55.0% | |
| TCTCAAGCTCTGTCCCGCTA+GGG | - | chr1_2:30749933-30749952 | Msa0066740:CDS | 55.0% | |
| AGGACACGATGGATGCTGAC+GGG | - | chr1_2:30751078-30751097 | Msa0066740:intron | 55.0% | |
| ATGGATGCTGACGGGAGTGA+CGG | - | chr1_2:30751086-30751105 | Msa0066740:intron | 55.0% | |
| ! | GACGGTGGTGACGACAATGA+TGG | - | chr1_2:30751104-30751123 | Msa0066740:intron | 55.0% |
| ! | GGTTCCCATGTCTGGTGTTG+AGG | - | chr1_2:30751151-30751170 | Msa0066740:intron | 55.0% |
| CTTGATGCCCGGGATCCCTT+GGG | - | chr1_2:30746283-30746302 | Msa0066740:intron | 60.0% | |
| ACGAGTACCCAAGGGATCCC+GGG | + | chr1_2:30746293-30746312 | None:intergenic | 60.0% | |
| AACTAGTTCCCCTGGGGCAC+TGG | - | chr1_2:30747005-30747024 | Msa0066740:intron | 60.0% | |
| ! | ACTAGTTCCCCTGGGGCACT+GGG | - | chr1_2:30747006-30747025 | Msa0066740:intron | 60.0% |
| TCCTTAACCCAGTGCCCCAG+GGG | + | chr1_2:30747016-30747035 | None:intergenic | 60.0% | |
| CTCCTTAACCCAGTGCCCCA+GGG | + | chr1_2:30747017-30747036 | None:intergenic | 60.0% | |
| ACTCCTTAACCCAGTGCCCC+AGG | + | chr1_2:30747018-30747037 | None:intergenic | 60.0% | |
| GCGAACCGGTACGCACGAAT+TGG | + | chr1_2:30747121-30747140 | None:intergenic | 60.0% | |
| TGGTACGAGTACGCGGTACG+CGG | + | chr1_2:30747675-30747694 | None:intergenic | 60.0% | |
| CGGTACGTGGTACGAGTACG+CGG | + | chr1_2:30747682-30747701 | None:intergenic | 60.0% | |
| CTCCTTAACCGGTGCCCATG+AGG | - | chr1_2:30747796-30747815 | Msa0066740:intron | 60.0% | |
| !! | TGCCTCATGGGCACCGGTTA+AGG | + | chr1_2:30747801-30747820 | None:intergenic | 60.0% |
| ! | GTGCTAGTGCTGGGTCGACA+AGG | - | chr1_2:30748553-30748572 | Msa0066740:intron | 60.0% |
| AGGGGCAAGCTCAAGAAGGG+TGG | - | chr1_2:30750027-30750046 | Msa0066740:intron | 60.0% | |
| AAGGAAGGCGGGGTTGCCAG+TGG | - | chr1_2:30746001-30746020 | Msa0066740:intron | 65.0% | |
| CCAAGGGATCCCGGGCATCA+AGG | + | chr1_2:30746285-30746304 | None:intergenic | 65.0% | |
| CCTTGATGCCCGGGATCCCT+TGG | - | chr1_2:30746282-30746301 | Msa0066740:intron | 65.0% | |
| !! | TCCCCTGGGGCACTGGGTTA+AGG | - | chr1_2:30747012-30747031 | Msa0066740:intron | 65.0% |
| AACCGGTGCCCATGAGGCAC+CGG | - | chr1_2:30747802-30747821 | Msa0066740:intron | 65.0% | |
| AACCGGTGCCTCATGGGCAC+CGG | + | chr1_2:30747807-30747826 | None:intergenic | 65.0% | |
| GATGCTGACGGGAGTGACGG+TGG | - | chr1_2:30751089-30751108 | Msa0066740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 30744589 | 30751581 | 30744589 | ID=Msa0066740;Name=Msa0066740 |
| chr1_2 | mRNA | 30744589 | 30751581 | 30744589 | ID=Msa0066740-mRNA-1;Parent=Msa0066740;Name=Msa0066740-mRNA-1;_AED=0.03;_eAED=0.03;_QI=24|1|1|1|0.88|0.8|10|297|599 |
| chr1_2 | exon | 30744589 | 30744854 | 30744589 | ID=Msa0066740-mRNA-1:exon:10239;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30744955 | 30745369 | 30744955 | ID=Msa0066740-mRNA-1:exon:10238;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30745741 | 30745952 | 30745741 | ID=Msa0066740-mRNA-1:exon:10237;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30746068 | 30746247 | 30746068 | ID=Msa0066740-mRNA-1:exon:10236;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30747450 | 30747714 | 30747450 | ID=Msa0066740-mRNA-1:exon:10235;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30749491 | 30749699 | 30749491 | ID=Msa0066740-mRNA-1:exon:10234;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30749785 | 30749958 | 30749785 | ID=Msa0066740-mRNA-1:exon:10233;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30750066 | 30750177 | 30750066 | ID=Msa0066740-mRNA-1:exon:10232;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30751205 | 30751449 | 30751205 | ID=Msa0066740-mRNA-1:exon:10231;Parent=Msa0066740-mRNA-1 |
| chr1_2 | exon | 30751539 | 30751581 | 30751539 | ID=Msa0066740-mRNA-1:exon:10230;Parent=Msa0066740-mRNA-1 |
| chr1_2 | five_prime_UTR | 30751558 | 30751581 | 30751558 | ID=Msa0066740-mRNA-1:five_prime_utr;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30751539 | 30751557 | 30751539 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30751205 | 30751449 | 30751205 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30750066 | 30750177 | 30750066 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30749785 | 30749958 | 30749785 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30749491 | 30749699 | 30749491 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30747450 | 30747714 | 30747450 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30746068 | 30746247 | 30746068 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30745741 | 30745952 | 30745741 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | CDS | 30744986 | 30745369 | 30744986 | ID=Msa0066740-mRNA-1:cds;Parent=Msa0066740-mRNA-1 |
| chr1_2 | three_prime_UTR | 30744955 | 30744985 | 30744955 | ID=Msa0066740-mRNA-1:three_prime_utr;Parent=Msa0066740-mRNA-1 |
| chr1_2 | three_prime_UTR | 30744589 | 30744854 | 30744589 | ID=Msa0066740-mRNA-1:three_prime_utr;Parent=Msa0066740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
