AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554290 MtrunA17_Chr4g0040381 95.897 780 22 1 1 770 1 780 0.0 1537
Msa0554290 MtrunA17_Chr4g0035141 78.627 772 71 9 1 770 1 680 0.0 1156
Msa0554290 MtrunA17_Chr2g0282131 32.636 239 139 7 1 226 1 230 3.64e-33 130
Msa0554290 MtrunA17_Chr5g0435361 27.586 232 112 5 13 199 8 228 2.42e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554290 AT4G25730.1 61.140 772 277 9 4 770 2 755 0.0 919
Msa0554290 AT5G01230.1 33.473 239 137 7 1 226 1 230 1.68e-34 134
Msa0554290 AT5G13830.1 29.204 226 107 6 13 199 8 219 1.01e-15 77.4
Msa0554290 AT5G01230.2 48.333 60 28 1 1 60 1 57 8.86e-12 61.2

Find 169 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGAAGATTTGAGGGTTT+TGG 0.056725 4_1:+51558451 Msa0554290:CDS
ATCTGCTGAGATATATATTT+TGG 0.117981 4_1:+51557640 Msa0554290:CDS
ATCTTCATCTGAATCATATT+TGG 0.153647 4_1:-51561331 None:intergenic
TCGAGGCGCGATTGCTATTC+AGG 0.166197 4_1:+51556453 Msa0554290:CDS
GGGATTGCCCAAGTGGTTTC+TGG 0.182660 4_1:+51561827 Msa0554290:CDS
GCCTCAGCCACCTTCTTTGC+AGG 0.204831 4_1:-51561942 None:intergenic
AGGAAAATTATGAATGAAAA+TGG 0.228031 4_1:+51556511 Msa0554290:CDS
CTCCCAATGTTGGTGGTGCT+TGG 0.262237 4_1:+51556569 Msa0554290:CDS
TCGGTCAATTTGCTTATTCT+TGG 0.270953 4_1:-51562060 None:intergenic
TGATGCAGACTCCCAACTTT+TGG 0.277133 4_1:+51560760 Msa0554290:CDS
GGATTCGAGGAAATGGAATT+TGG 0.294730 4_1:-51556314 None:intergenic
AGAACGGTAACCGTGTTCTT+TGG 0.300601 4_1:-51556260 None:intergenic
GAATCCTCGGAATCAGTTTC+AGG 0.300811 4_1:-51561672 None:intergenic
AAAATACCTCTTCAGTTGTT+AGG 0.308107 4_1:-51558315 None:intergenic
AATCTCAAAATCCATTTCAT+TGG 0.329088 4_1:-51561640 None:intergenic
CTAACTCTAGATTTACATTC+AGG 0.329912 4_1:-51556490 None:intergenic
AACACGCTTCTTCCGTGCTT+TGG 0.332263 4_1:-51561964 None:intergenic
TTTGCTTTACCCATTGTTGA+TGG 0.336864 4_1:-51556196 None:intergenic
TCCCAATGTTGGTGGTGCTT+GGG 0.351691 4_1:+51556570 Msa0554290:CDS
GATACTCCTCTGGAGATTCT+TGG 0.360047 4_1:+51558235 Msa0554290:CDS
TCTTTCGTGACAGGCTTAAC+TGG 0.364894 4_1:-51561873 None:intergenic
ATTCTGACGAAGAACGTAAA+AGG 0.372662 4_1:+51560301 Msa0554290:CDS
ATCTCTCTGTGAAGATTTGA+GGG 0.373125 4_1:+51558445 Msa0554290:CDS
ATCTAAAGCATCCAATGAAA+TGG 0.378752 4_1:+51561629 Msa0554290:CDS
AGCTGGATCAGTAAAGCTTA+TGG 0.381413 4_1:-51558269 None:intergenic
CTCGATCTCTGCGCCGCCCC+TGG 0.387074 4_1:+51556349 Msa0554290:CDS
TCAAGAAGCAAATCCTTTGA+TGG 0.387985 4_1:+51561362 Msa0554290:CDS
CCCGTCGATCATCTCGTTAT+CGG 0.389719 4_1:+51556403 Msa0554290:CDS
CTGAATGTAAATCTAGAGTT+AGG 0.399356 4_1:+51556491 Msa0554290:CDS
CACAAATATGTGGTTTAGTC+AGG 0.399550 4_1:+51561425 Msa0554290:CDS
AATCTCTCTGTGAAGATTTG+AGG 0.419218 4_1:+51558444 Msa0554290:CDS
GAGATTGAAGTTGAAGGAGG+AGG 0.419575 4_1:-51556161 None:intergenic
AGCGTGAGGATTCGAGGAAA+TGG 0.422603 4_1:-51556321 None:intergenic
AAGTTGGGAGTCTGCATCAT+AGG 0.427509 4_1:-51560756 None:intergenic
TTTGATGTTATTCTTCATGA+TGG 0.436220 4_1:+51556544 Msa0554290:CDS
ACATATTTGTGATCTCCTCT+TGG 0.436244 4_1:-51561413 None:intergenic
GCAACATCCTCTTTCGTGAC+AGG 0.437692 4_1:-51561882 None:intergenic
CATATTTGTGATCTCCTCTT+GGG 0.439598 4_1:-51561412 None:intergenic
TCTGCGCCGCCCCTGGTGGT+TGG 0.440122 4_1:+51556356 Msa0554290:CDS
TTCCTCATCCAGAAACCACT+TGG 0.441265 4_1:-51561835 None:intergenic
GCCCAAGTGGTTTCTGGATG+AGG 0.441943 4_1:+51561833 Msa0554290:CDS
GACAAGGCGCGGAAAGCTAC+AGG 0.445252 4_1:+51559121 Msa0554290:CDS
TCCACCTCAGCTGTAGTAGC+AGG 0.451487 4_1:-51558690 None:intergenic
GTTAGGTCGTGATCCTTGAT+TGG 0.451651 4_1:-51558298 None:intergenic
TGATAGAATACTCAACGAAA+TGG 0.455129 4_1:+51558740 Msa0554290:CDS
GGATGACAGCGAGAATGAAA+TGG 0.459874 4_1:+51561488 Msa0554290:CDS
AGATTGAAGTTGAAGGAGGA+GGG 0.462785 4_1:-51556160 None:intergenic
AACCAGATATGATGAACAAA+TGG 0.466646 4_1:+51560652 Msa0554290:intron
TTAGTAACAAAAGTTCCCTT+AGG 0.470881 4_1:-51556661 None:intergenic
TTTACCCATTGTTGATGGAT+TGG 0.471303 4_1:-51556191 None:intergenic
CTCAGCTGTAGTAGCAGGTT+CGG 0.473439 4_1:-51558685 None:intergenic
TCCTTGATTGGTATATCAGC+TGG 0.476466 4_1:-51558286 None:intergenic
ATGCAGATGGTGGATGTACT+TGG 0.476660 4_1:+51557836 Msa0554290:intron
AGCTCCATACCTCCAAAAGT+TGG 0.477483 4_1:-51560772 None:intergenic
GCGCCTCGAAGTGGTTTAAT+CGG 0.478159 4_1:-51556439 None:intergenic
ATGCGAGGATCAATCTTAGC+AGG 0.479923 4_1:-51557680 None:intergenic
GAAGAAGAGATTGAAGTTGA+AGG 0.481024 4_1:-51556167 None:intergenic
AGCCCAAGCACCACCAACAT+TGG 0.491668 4_1:-51556572 None:intergenic
TCCAGCTGATATACCAATCA+AGG 0.495100 4_1:+51558285 Msa0554290:CDS
GAGAATGAAATGGATATTGA+TGG 0.495925 4_1:+51561498 Msa0554290:CDS
AGCAAAAGAGGCATCGTGAC+GGG 0.496805 4_1:+51557867 Msa0554290:CDS
GCCCAAGCACCACCAACATT+GGG 0.496890 4_1:-51556571 None:intergenic
ATATGATTCAGATGAAGATC+AGG 0.497095 4_1:+51561335 Msa0554290:CDS
TTCACCAATCCATCAACAAT+GGG 0.499075 4_1:+51556187 Msa0554290:exon
TTGGAACGATCAGATATGTC+TGG 0.501867 4_1:-51562041 None:intergenic
TTTGTGATCTCCTCTTGGGT+GGG 0.504064 4_1:-51561408 None:intergenic
TTGGAAACAATAAGCAAAAG+AGG 0.505563 4_1:+51557855 Msa0554290:CDS
TAAGTACATGTTTGATGACC+AGG 0.505574 4_1:+51561806 Msa0554290:CDS
ACCTGCAAAGAAGGTGGCTG+AGG 0.505683 4_1:+51561941 Msa0554290:CDS
ATTTGTGATCTCCTCTTGGG+TGG 0.505793 4_1:-51561409 None:intergenic
GCTCCATACCTCCAAAAGTT+GGG 0.507010 4_1:-51560771 None:intergenic
ATGGGTAAAGCAAAAGCAAA+AGG 0.507777 4_1:+51556205 Msa0554290:CDS
TCTGTAAGTGGCACCATCAA+AGG 0.508040 4_1:-51561375 None:intergenic
TCGGAATCAGTTTCAGGTGC+AGG 0.511470 4_1:-51561666 None:intergenic
GTTACCGTTCTCGTGCATCA+TGG 0.512816 4_1:+51556272 Msa0554290:CDS
TGAAAAGTAAATTATAGCAT+TGG 0.515304 4_1:-51562110 None:intergenic
GAACGGAGCGTGAGGATTCG+AGG 0.522727 4_1:-51556327 None:intergenic
TTGTGCTACAGGTATGAAGA+TGG 0.526372 4_1:+51558163 Msa0554290:intron
ATCGACGGGAACACGTTGAA+CGG 0.527840 4_1:-51556389 None:intergenic
TGTTTGGACAGATACTCCTC+TGG 0.528273 4_1:+51558225 Msa0554290:CDS
AATGGATATTGATGGATTGA+AGG 0.529792 4_1:+51561506 Msa0554290:CDS
TGTATTGCAGTTGTTTGAGA+AGG 0.530032 4_1:+51557583 Msa0554290:intron
TGATACTAGACCTGCAAAGA+AGG 0.532383 4_1:+51561932 Msa0554290:CDS
GCGACTTGCATCCAACCACC+AGG 0.532806 4_1:-51556367 None:intergenic
AAACAATTAACCTTAGCTAT+CGG 0.534090 4_1:-51557740 None:intergenic
GCAAACCTTCATAGAAGCAA+GGG 0.534739 4_1:-51559191 None:intergenic
GTGCCACTTACAGATGGTAC+AGG 0.535287 4_1:+51561384 Msa0554290:CDS
TGAAGGAGGAGGGTTGTGAA+TGG 0.536612 4_1:-51556150 None:intergenic
CATGATGGTTCTCCCAATGT+TGG 0.542545 4_1:+51556559 Msa0554290:CDS
CTCATCAGATGACGAATCCT+CGG 0.543574 4_1:-51561685 None:intergenic
TGGCTGGTCTGATATAGCAT+TGG 0.545274 4_1:-51562021 None:intergenic
AAAGATCAAAGAAAATAAAA+CGG 0.550124 4_1:+51561578 Msa0554290:CDS
GAAACCACTTGGGCAATCCC+TGG 0.550706 4_1:-51561824 None:intergenic
GCTCCGATTAAACCACTTCG+AGG 0.551749 4_1:+51556436 Msa0554290:CDS
AACGATCAGATATGTCTGGC+TGG 0.552061 4_1:-51562037 None:intergenic
AAGATGGAAACACAACTTTG+AGG 0.553591 4_1:+51558179 Msa0554290:CDS
AGTTAAGCCTGTCACGAAAG+AGG 0.553825 4_1:+51561875 Msa0554290:CDS
ATATAGCATTGGCCTTCTTG+CGG 0.554799 4_1:-51562010 None:intergenic
AGCAAACCTTCATAGAAGCA+AGG 0.555182 4_1:-51559192 None:intergenic
TGTCTTTGCTGAAGCTGTAG+AGG 0.557186 4_1:+51561449 Msa0554290:CDS
GAAGAGATTGAAGTTGAAGG+AGG 0.559626 4_1:-51556164 None:intergenic
ATAGCAATCGCGCCTCGAAG+TGG 0.563885 4_1:-51556448 None:intergenic
CTTCACCAATCCATCAACAA+TGG 0.564706 4_1:+51556186 Msa0554290:exon
GGCCCTGTACCATCTGTAAG+TGG 0.570155 4_1:-51561387 None:intergenic
TGCACCTGAAACTGATTCCG+AGG 0.579322 4_1:+51561668 Msa0554290:CDS
CACTGACTATGAAGGTGGCG+AGG 0.579717 4_1:+51560212 Msa0554290:CDS
TCCTCATCCAGAAACCACTT+GGG 0.580501 4_1:-51561834 None:intergenic
GATGGTTCTCCCAATGTTGG+TGG 0.580953 4_1:+51556562 Msa0554290:CDS
GTTTCCATGATGCACGAGAA+CGG 0.581399 4_1:-51556276 None:intergenic
TCCGATAACGAGATGATCGA+CGG 0.583188 4_1:-51556404 None:intergenic
GCAGATTCAGAACGACTAGC+CGG 0.583189 4_1:-51557623 None:intergenic
ACCTGCTACTACAGCTGAGG+TGG 0.584451 4_1:+51558689 Msa0554290:CDS
ATGACCAGGGATTGCCCAAG+TGG 0.588076 4_1:+51561820 Msa0554290:CDS
AGAGGAAGGAGGCTTTGAGA+AGG 0.588884 4_1:+51561467 Msa0554290:CDS
CCGATAACGAGATGATCGAC+GGG 0.588987 4_1:-51556403 None:intergenic
TGAAGGTGGCGAGGGTGAAG+TGG 0.589936 4_1:+51560221 Msa0554290:CDS
TGTGGTGTGGTGTATGAAGA+AGG 0.590485 4_1:+51556806 Msa0554290:CDS
TTGATGGTGCCACTTACAGA+TGG 0.590708 4_1:+51561378 Msa0554290:CDS
TGCGAGGATCAATCTTAGCA+GGG 0.591124 4_1:-51557679 None:intergenic
TCATCTGAATCATATTTGGA+CGG 0.595641 4_1:-51561327 None:intergenic
TTCTGCTCAACCGATAGCTA+AGG 0.596585 4_1:+51557730 Msa0554290:CDS
CAGATATGATGAACAAATGG+AGG 0.598813 4_1:+51560655 Msa0554290:intron
GCTGAAGCTGTAGAGGAAGG+AGG 0.599542 4_1:+51561456 Msa0554290:CDS
GATCTCTGCGCCGCCCCTGG+TGG 0.599949 4_1:+51556352 Msa0554290:CDS
TACTTGAACAAGCTTATGAG+CGG 0.604310 4_1:+51560681 Msa0554290:CDS
AAGCAAGGGAAAACAACTCA+TGG 0.604688 4_1:-51559177 None:intergenic
GCAGTTGTTTGAGAAGGTTG+AGG 0.607438 4_1:+51557589 Msa0554290:intron
GTTGTTTGAGAAGGTTGAGG+TGG 0.608440 4_1:+51557592 Msa0554290:intron
TTGCATCCAACCACCAGGGG+CGG 0.609416 4_1:-51556362 None:intergenic
AAGAGGAGATCACAAATATG+TGG 0.610175 4_1:+51561415 Msa0554290:CDS
AAGTACATGTTTGATGACCA+GGG 0.610744 4_1:+51561807 Msa0554290:CDS
GTTGACACCACTGACTATGA+AGG 0.612962 4_1:+51560204 Msa0554290:CDS
GGCGGCGCAGAGATCGAGAA+CGG 0.614066 4_1:-51556344 None:intergenic
TGGAAACACAACTTTGAGGA+AGG 0.614292 4_1:+51558183 Msa0554290:CDS
GATTGAGAAAGTCCGCAAGA+AGG 0.615324 4_1:+51561998 Msa0554290:CDS
AGGATTACAATTCTGTGGTG+TGG 0.621501 4_1:+51556793 Msa0554290:CDS
CTCGCCACCTTCATAGTCAG+TGG 0.621671 4_1:-51560211 None:intergenic
GGAGGAACTGACAAATGCAA+TGG 0.622437 4_1:+51558761 Msa0554290:CDS
ACTGACTATGAAGGTGGCGA+GGG 0.623205 4_1:+51560213 Msa0554290:CDS
TTTGCTGAAGCTGTAGAGGA+AGG 0.623225 4_1:+51561453 Msa0554290:CDS
TCACGACCTAACAACTGAAG+AGG 0.624876 4_1:+51558309 Msa0554290:CDS
GTCTCAGGATTACAATTCTG+TGG 0.630615 4_1:+51556788 Msa0554290:CDS
AAGCAAAAGAGGCATCGTGA+CGG 0.630705 4_1:+51557866 Msa0554290:CDS
GAGATCGAGAACGGAGCGTG+AGG 0.632094 4_1:-51556335 None:intergenic
TTCGTCATCTGATGAGTCGG+AGG 0.640132 4_1:+51561692 Msa0554290:CDS
GACTTGCATCCAACCACCAG+GGG 0.641278 4_1:-51556365 None:intergenic
TACTAGACCTGCAAAGAAGG+TGG 0.643500 4_1:+51561935 Msa0554290:CDS
GAAAGCTACAGGGATGCAAG+TGG 0.643829 4_1:+51559132 Msa0554290:CDS
GGATTCGTCATCTGATGAGT+CGG 0.647282 4_1:+51561689 Msa0554290:CDS
TGCCACTTACAGATGGTACA+GGG 0.648540 4_1:+51561385 Msa0554290:CDS
CTTATGCTAAGAAGATGCTG+AGG 0.650492 4_1:+51561745 Msa0554290:CDS
GGAAAATGAGCATGATGTGG+TGG 0.650915 4_1:+51558710 Msa0554290:CDS
TGCTTGATATCGAGAATGCG+AGG 0.652693 4_1:-51557695 None:intergenic
CGACTTGCATCCAACCACCA+GGG 0.654008 4_1:-51556366 None:intergenic
ACAAGGCGCGGAAAGCTACA+GGG 0.654275 4_1:+51559122 Msa0554290:CDS
TACTACTTAGCCAAAGAACA+CGG 0.656107 4_1:+51556250 Msa0554290:CDS
GAGAATGATGAAAACAAAGG+TGG 0.658526 4_1:+51560252 Msa0554290:CDS
TAGAATACTCAACGAAATGG+AGG 0.659661 4_1:+51558743 Msa0554290:CDS
AGGTGGCTGAGGCCAAAGCA+CGG 0.664696 4_1:+51561952 Msa0554290:CDS
GGAAGAAGCGTGTTGCAATG+AGG 0.668768 4_1:+51561973 Msa0554290:CDS
GCGAGGATCAATCTTAGCAG+GGG 0.672582 4_1:-51557678 None:intergenic
GATTCAGAACGACTAGCCGG+TGG 0.675718 4_1:-51557620 None:intergenic
TGGTACAGGGCCCACCCAAG+AGG 0.676289 4_1:+51561398 Msa0554290:CDS
CGAACCTGCTACTACAGCTG+AGG 0.683122 4_1:+51558686 Msa0554290:CDS
TGACAGGCTTAACTGGTACA+CGG 0.694707 4_1:-51561866 None:intergenic
GACACCACTGACTATGAAGG+TGG 0.714974 4_1:+51560207 Msa0554290:CDS
AGTGAGAATGATGAAAACAA+AGG 0.718737 4_1:+51560249 Msa0554290:CDS
GGTGGAAAATGAGCATGATG+TGG 0.733532 4_1:+51558707 Msa0554290:CDS
ACTGAACCAAGAATCTCCAG+AGG 0.740370 4_1:-51558241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGATAATTTCATAATTA+AGG - chr4_1:51556717-51556736 None:intergenic 10.0%
!!! TTTTTCTTTTATTTTATATC+TGG + chr4_1:51558584-51558603 Msa0554290:intron 10.0%
!!! TTTTCTTTTATTTTATATCT+GGG + chr4_1:51558585-51558604 Msa0554290:intron 10.0%
!! TTTAATTAGATGTTATAAAC+AGG - chr4_1:51557119-51557138 None:intergenic 15.0%
!! TATTAAACCAATGATATATA+TGG + chr4_1:51557175-51557194 Msa0554290:intron 15.0%
!! AGTTTATAGGAAAAAAAAAT+CGG + chr4_1:51557278-51557297 Msa0554290:intron 15.0%
!!! AAAAAAGAATAAACATTTTC+AGG - chr4_1:51558567-51558586 None:intergenic 15.0%
!!! TTTCTTTTATTTTATATCTG+GGG + chr4_1:51558586-51558605 Msa0554290:intron 15.0%
!! TAATACTTCAATTGTTAATA+AGG - chr4_1:51559461-51559480 None:intergenic 15.0%
!! TTAAATAAAGTAATATTGTG+AGG + chr4_1:51560472-51560491 Msa0554290:intron 15.0%
!! TAAATAAAGTAATATTGTGA+GGG + chr4_1:51560473-51560492 Msa0554290:intron 15.0%
!! AAAGATCAAAGAAAATAAAA+CGG + chr4_1:51561578-51561597 Msa0554290:CDS 15.0%
!! AGGAAAATTATGAATGAAAA+TGG + chr4_1:51556511-51556530 Msa0554290:CDS 20.0%
!! GAAGTTAATTAAGCAAAATT+AGG - chr4_1:51556695-51556714 None:intergenic 20.0%
!!! AACTTCCTATTTTCAATTTT+AGG + chr4_1:51557025-51557044 Msa0554290:intron 20.0%
!! TATAAGACCATATATATCAT+TGG - chr4_1:51557185-51557204 None:intergenic 20.0%
!!! ATTGATAACATGAAGTTTAT+AGG + chr4_1:51557265-51557284 Msa0554290:intron 20.0%
!! GTTTATAGGAAAAAAAAATC+GGG + chr4_1:51557279-51557298 Msa0554290:intron 20.0%
!!! TTCTTTTATTTTATATCTGG+GGG + chr4_1:51558587-51558606 Msa0554290:intron 20.0%
!!! TATTTGTTGGAAACTATAAT+AGG + chr4_1:51558917-51558936 Msa0554290:intron 20.0%
!! TTTATTACTCATCTTTAGAT+AGG + chr4_1:51560104-51560123 Msa0554290:intron 20.0%
!! ACTATTTATTAATCGTTTCT+TGG + chr4_1:51560140-51560159 Msa0554290:intron 20.0%
!!! AGATAATAGTTTTCAAGAAT+CGG - chr4_1:51561013-51561032 None:intergenic 20.0%
!! ATAGGATATATTTGAATGAA+GGG - chr4_1:51561083-51561102 None:intergenic 20.0%
!! TCATATTAAATATTCGACAT+AGG - chr4_1:51561101-51561120 None:intergenic 20.0%
!! TGAAATCATGTTTATATTAC+CGG - chr4_1:51561130-51561149 None:intergenic 20.0%
!!! TAAATATTTCTTTTTGCACA+CGG - chr4_1:51561254-51561273 None:intergenic 20.0%
! TTTGATGTTATTCTTCATGA+TGG + chr4_1:51556544-51556563 Msa0554290:CDS 25.0%
!!! TCTGTTTGTGTTTTTTAATC+TGG + chr4_1:51556859-51556878 Msa0554290:intron 25.0%
!!! TGTGTTTTTTAATCTGGTTT+TGG + chr4_1:51556865-51556884 Msa0554290:intron 25.0%
! TTAAGATGTTTATCCAAACA+TGG - chr4_1:51556891-51556910 None:intergenic 25.0%
! ACTTATGTATAAGTTATTCC+TGG + chr4_1:51556948-51556967 Msa0554290:intron 25.0%
! AGGAAGTTTGTATATTTAGA+AGG - chr4_1:51557013-51557032 None:intergenic 25.0%
! TTATAACACGAATGTACAAA+AGG - chr4_1:51557056-51557075 None:intergenic 25.0%
! TGTCATTAAAAAAAGTCCTT+TGG + chr4_1:51557215-51557234 Msa0554290:intron 25.0%
!!! AAATCGGGAATTTTTTTTTG+AGG + chr4_1:51557294-51557313 Msa0554290:intron 25.0%
!!! AATCGGGAATTTTTTTTTGA+GGG + chr4_1:51557295-51557314 Msa0554290:intron 25.0%
!! TGATAGTTGGTATATTTAGA+GGG + chr4_1:51557326-51557345 Msa0554290:intron 25.0%
!! TTTTATAAGCTAAGCTATCT+TGG + chr4_1:51557370-51557389 Msa0554290:intron 25.0%
!! AGAACAATTTCGATACTTTT+TGG - chr4_1:51557461-51557480 None:intergenic 25.0%
! TTGTTAATTGTTTGATGTTG+TGG + chr4_1:51557548-51557567 Msa0554290:intron 25.0%
!! ATCTGCTGAGATATATATTT+TGG + chr4_1:51557640-51557659 Msa0554290:CDS 25.0%
!! TCTGCTGAGATATATATTTT+GGG + chr4_1:51557641-51557660 Msa0554290:CDS 25.0%
! AAACAATTAACCTTAGCTAT+CGG - chr4_1:51557743-51557762 None:intergenic 25.0%
!!! CTCTTTTCATTTGATTTACT+TGG + chr4_1:51557799-51557818 Msa0554290:intron 25.0%
! TTTGCAAAAGAAACTAATTG+TGG + chr4_1:51558022-51558041 Msa0554290:intron 25.0%
!! AATGTTATGATATTTGGAGT+AGG + chr4_1:51558047-51558066 Msa0554290:intron 25.0%
!! ATGTTATGATATTTGGAGTA+GGG + chr4_1:51558048-51558067 Msa0554290:intron 25.0%
!! TTAACTGCTTATTTAGAGTA+GGG + chr4_1:51558083-51558102 Msa0554290:intron 25.0%
! GTTGTAACTGCTTAATTATA+TGG + chr4_1:51558114-51558133 Msa0554290:intron 25.0%
!! TTATAACTATTTTGTGCTAC+AGG + chr4_1:51558152-51558171 Msa0554290:intron 25.0%
!! TAATTTTCTTAGTAGTCTGA+GGG + chr4_1:51558359-51558378 Msa0554290:intron 25.0%
!! GATAATAAAAGCTTTGATTG+TGG + chr4_1:51558406-51558425 Msa0554290:intron 25.0%
! GCAACATTGTTAATATTTGT+TGG + chr4_1:51558904-51558923 Msa0554290:intron 25.0%
!! CTGTTTTATAATCCTTTTTG+TGG + chr4_1:51559053-51559072 Msa0554290:intron 25.0%
! AAATAAATATTGTGCGCTTT+CGG - chr4_1:51559515-51559534 None:intergenic 25.0%
! AAAGCGCACAATATTTATTT+GGG + chr4_1:51559515-51559534 Msa0554290:intron 25.0%
!! TATCTTAGCATATGTTCTTT+TGG + chr4_1:51559958-51559977 Msa0554290:intron 25.0%
! AGTAAGATATACTCTCTTTA+TGG - chr4_1:51559999-51560018 None:intergenic 25.0%
!! AGTATATCTTACTTACCTTT+TGG + chr4_1:51560006-51560025 Msa0554290:intron 25.0%
!! GTATATCTTACTTACCTTTT+GGG + chr4_1:51560007-51560026 Msa0554290:intron 25.0%
!! ACCTTGTTTATCTCATAAAT+GGG + chr4_1:51560912-51560931 Msa0554290:intron 25.0%
!!! GATAATAGTTTTCAAGAATC+GGG - chr4_1:51561012-51561031 None:intergenic 25.0%
! TTAAAGGAAACTGGAATTAA+AGG - chr4_1:51561054-51561073 None:intergenic 25.0%
! CATAGGATATATTTGAATGA+AGG - chr4_1:51561084-51561103 None:intergenic 25.0%
! ATATTTAATATGAAGCTCAC+CGG + chr4_1:51561108-51561127 Msa0554290:intron 25.0%
! ATCTTCATCTGAATCATATT+TGG - chr4_1:51561334-51561353 None:intergenic 25.0%
! AATCTCAAAATCCATTTCAT+TGG - chr4_1:51561643-51561662 None:intergenic 25.0%
CTAACTCTAGATTTACATTC+AGG - chr4_1:51556493-51556512 None:intergenic 30.0%
! CTGAATGTAAATCTAGAGTT+AGG + chr4_1:51556491-51556510 Msa0554290:CDS 30.0%
TTAGTAACAAAAGTTCCCTT+AGG - chr4_1:51556664-51556683 None:intergenic 30.0%
! TAAGGGAACTTTTGTTACTA+AGG + chr4_1:51556663-51556682 Msa0554290:CDS 30.0%
TATTCCTGGCAAAAGATAAA+AGG + chr4_1:51556962-51556981 Msa0554290:intron 30.0%
ATTCCTGGCAAAAGATAAAA+GGG + chr4_1:51556963-51556982 Msa0554290:intron 30.0%
TTGTATATTTAGAAGGACGA+AGG - chr4_1:51557006-51557025 None:intergenic 30.0%
CATGGCCTAAAATTGAAAAT+AGG - chr4_1:51557033-51557052 None:intergenic 30.0%
! CTGATAGTTGGTATATTTAG+AGG + chr4_1:51557325-51557344 Msa0554290:intron 30.0%
! ATGCCTCAAATTGTTTTCAT+AGG + chr4_1:51557430-51557449 Msa0554290:intron 30.0%
GAACCTATGAAAACAATTTG+AGG - chr4_1:51557436-51557455 None:intergenic 30.0%
TTCACAATGAATTCCACATA+GGG - chr4_1:51557526-51557545 None:intergenic 30.0%
ATTCACAATGAATTCCACAT+AGG - chr4_1:51557527-51557546 None:intergenic 30.0%
TTAATTGTTTGATGTTGTGG+TGG + chr4_1:51557551-51557570 Msa0554290:intron 30.0%
! CTGCTGAGATATATATTTTG+GGG + chr4_1:51557642-51557661 Msa0554290:CDS 30.0%
!! TGTTGAATTGATAATGCAGA+TGG + chr4_1:51557823-51557842 Msa0554290:intron 30.0%
TTGGAAACAATAAGCAAAAG+AGG + chr4_1:51557855-51557874 Msa0554290:CDS 30.0%
! GGATTTTACATTGTTTCGTT+CGG + chr4_1:51557913-51557932 Msa0554290:intron 30.0%
! GATTTTACATTGTTTCGTTC+GGG + chr4_1:51557914-51557933 Msa0554290:intron 30.0%
TTTACGCATTCTTTCTCAAA+TGG + chr4_1:51557937-51557956 Msa0554290:intron 30.0%
GTGGAGAATGTTATGATATT+TGG + chr4_1:51558041-51558060 Msa0554290:intron 30.0%
TCTAAATAAGCAGTTAACTG+CGG - chr4_1:51558080-51558099 None:intergenic 30.0%
! GTTAACTGCTTATTTAGAGT+AGG + chr4_1:51558082-51558101 Msa0554290:intron 30.0%
AAAATACCTCTTCAGTTGTT+AGG - chr4_1:51558318-51558337 None:intergenic 30.0%
!!! CAACTGAAGAGGTATTTTTT+TGG + chr4_1:51558320-51558339 Msa0554290:intron 30.0%
! CTAATTTTCTTAGTAGTCTG+AGG + chr4_1:51558358-51558377 Msa0554290:intron 30.0%
TGATAGAATACTCAACGAAA+TGG + chr4_1:51558740-51558759 Msa0554290:CDS 30.0%
!! CATGATTTTAGTGCCAAAAA+TGG + chr4_1:51558961-51558980 Msa0554290:intron 30.0%
GTTAATCCTTCCATTTATCA+TGG + chr4_1:51559014-51559033 Msa0554290:intron 30.0%
!!! TATACCCATTTTGGTTTTAC+AGG + chr4_1:51559099-51559118 Msa0554290:intron 30.0%
TTGTCCTGTAAAACCAAAAT+GGG - chr4_1:51559106-51559125 None:intergenic 30.0%
TACTCGTTATAAATGCATAG+TGG + chr4_1:51559479-51559498 Msa0554290:intron 30.0%
! GAAAGCGCACAATATTTATT+TGG + chr4_1:51559514-51559533 Msa0554290:intron 30.0%
AAGCGCACAATATTTATTTG+GGG + chr4_1:51559516-51559535 Msa0554290:intron 30.0%
TCAATTTATATGCTTGAAGC+AGG + chr4_1:51559564-51559583 Msa0554290:intron 30.0%
TAACAAAGTGAAGAAGAGTT+CGG - chr4_1:51559607-51559626 None:intergenic 30.0%
ACTCTTCTTCACTTTGTTAA+AGG + chr4_1:51559608-51559627 Msa0554290:intron 30.0%
TAAAGGAGATATGTACATAG+AGG + chr4_1:51559625-51559644 Msa0554290:intron 30.0%
! GGATTAGTAGGAAAATACTT+GGG - chr4_1:51559905-51559924 None:intergenic 30.0%
!! TGGATTAGTAGGAAAATACT+TGG - chr4_1:51559906-51559925 None:intergenic 30.0%
TAACTTACTCCAAAGAGTAA+TGG - chr4_1:51559926-51559945 None:intergenic 30.0%
AGTGAGAATGATGAAAACAA+AGG + chr4_1:51560249-51560268 Msa0554290:CDS 30.0%
!! AACTTTTAATCCTTGAGTTG+AGG - chr4_1:51560428-51560447 None:intergenic 30.0%
TCAACTCAAGGATTAAAAGT+TGG + chr4_1:51560427-51560446 Msa0554290:intron 30.0%
CAACTCAAGGATTAAAAGTT+GGG + chr4_1:51560428-51560447 Msa0554290:intron 30.0%
AACTCAAGGATTAAAAGTTG+GGG + chr4_1:51560429-51560448 Msa0554290:intron 30.0%
TAAAGTAATATTGTGAGGGA+AGG + chr4_1:51560477-51560496 Msa0554290:intron 30.0%
GAACAAATGTGATTGAAGAA+TGG - chr4_1:51560568-51560587 None:intergenic 30.0%
AACCAGATATGATGAACAAA+TGG + chr4_1:51560652-51560671 Msa0554290:intron 30.0%
ATGTGTCTATCTCTCATAAA+TGG - chr4_1:51560840-51560859 None:intergenic 30.0%
! CACCTTGTTTATCTCATAAA+TGG + chr4_1:51560911-51560930 Msa0554290:intron 30.0%
TCTCATAAATGGGCAATAAA+TGG + chr4_1:51560922-51560941 Msa0554290:intron 30.0%
TGAACTCTAATTAAACCTTC+TGG + chr4_1:51560953-51560972 Msa0554290:intron 30.0%
! TCTAATTAAACCTTCTGGTT+TGG + chr4_1:51560958-51560977 Msa0554290:intron 30.0%
!! CTAATTAAACCTTCTGGTTT+GGG + chr4_1:51560959-51560978 Msa0554290:intron 30.0%
! TGGTTTGGGAGTTATATAAA+GGG + chr4_1:51560973-51560992 Msa0554290:intron 30.0%
GAAACTGGAATTAAAGGAAT+GGG - chr4_1:51561048-51561067 None:intergenic 30.0%
GAATGAAGGGAAGAAATTAA+AGG - chr4_1:51561070-51561089 None:intergenic 30.0%
! TTTTGTCATGTCAAATGTGT+TGG + chr4_1:51561200-51561219 Msa0554290:intron 30.0%
! TTTTGCACACGGAATAAAAA+AGG - chr4_1:51561243-51561262 None:intergenic 30.0%
! ACACATGTTCTATTACCTTT+TGG + chr4_1:51561273-51561292 Msa0554290:intron 30.0%
TCATCTGAATCATATTTGGA+CGG - chr4_1:51561330-51561349 None:intergenic 30.0%
ATATGATTCAGATGAAGATC+AGG + chr4_1:51561335-51561354 Msa0554290:CDS 30.0%
GAGAATGAAATGGATATTGA+TGG + chr4_1:51561498-51561517 Msa0554290:CDS 30.0%
!! AATGGATATTGATGGATTGA+AGG + chr4_1:51561506-51561525 Msa0554290:CDS 30.0%
! ATCTAAAGCATCCAATGAAA+TGG + chr4_1:51561629-51561648 Msa0554290:CDS 30.0%
ATAAAAACGCTGTTCCAAAA+AGG + chr4_1:51562087-51562106 Msa0554290:CDS 30.0%
GAAGAAGAGATTGAAGTTGA+AGG - chr4_1:51556170-51556189 None:intergenic 35.0%
TTCACCAATCCATCAACAAT+GGG + chr4_1:51556187-51556206 Msa0554290:exon 35.0%
! TTTACCCATTGTTGATGGAT+TGG - chr4_1:51556194-51556213 None:intergenic 35.0%
TTTGCTTTACCCATTGTTGA+TGG - chr4_1:51556199-51556218 None:intergenic 35.0%
ATGGGTAAAGCAAAAGCAAA+AGG + chr4_1:51556205-51556224 Msa0554290:CDS 35.0%
TACTACTTAGCCAAAGAACA+CGG + chr4_1:51556250-51556269 Msa0554290:CDS 35.0%
!!! TACTCAGTTTTTAGCTCCTA+AGG + chr4_1:51556645-51556664 Msa0554290:CDS 35.0%
!!! ACTCAGTTTTTAGCTCCTAA+GGG + chr4_1:51556646-51556665 Msa0554290:CDS 35.0%
!! CTTTTACTTTGTTGTGTGCT+AGG + chr4_1:51556758-51556777 Msa0554290:intron 35.0%
TGTATTGCAGTTGTTTGAGA+AGG + chr4_1:51557583-51557602 Msa0554290:intron 35.0%
! CGATATCAAGCATCTTTTTG+AGG + chr4_1:51557706-51557725 Msa0554290:CDS 35.0%
!! TGAATTGATAATGCAGATGG+TGG + chr4_1:51557826-51557845 Msa0554290:intron 35.0%
AAATCCAAAACACAGTGATG+AGG - chr4_1:51557899-51557918 None:intergenic 35.0%
AAGATGGAAACACAACTTTG+AGG + chr4_1:51558179-51558198 Msa0554290:CDS 35.0%
! CTTCAGCTGCAAATTTTGTT+TGG + chr4_1:51558209-51558228 Msa0554290:CDS 35.0%
AATCTCTCTGTGAAGATTTG+AGG + chr4_1:51558444-51558463 Msa0554290:CDS 35.0%
ATCTCTCTGTGAAGATTTGA+GGG + chr4_1:51558445-51558464 Msa0554290:CDS 35.0%
! TGTGAAGATTTGAGGGTTTT+GGG + chr4_1:51558452-51558471 Msa0554290:CDS 35.0%
! ACTTTACTCTCTGTCATTTC+TGG + chr4_1:51558519-51558538 Msa0554290:intron 35.0%
GGTAATTATGTTGTATCTGC+TGG + chr4_1:51558608-51558627 Msa0554290:intron 35.0%
TAGAATACTCAACGAAATGG+AGG + chr4_1:51558743-51558762 Msa0554290:CDS 35.0%
!!! TTTTTTCACGCTTCTTCTTG+CGG - chr4_1:51558788-51558807 None:intergenic 35.0%
TCTATCAAAAAGAAGAGCCA+AGG + chr4_1:51558812-51558831 Msa0554290:CDS 35.0%
AACTAAGAAGCTACAAACCT+TGG - chr4_1:51558832-51558851 None:intergenic 35.0%
TAGTGCCAAAAATGGTTTCA+AGG + chr4_1:51558969-51558988 Msa0554290:intron 35.0%
! TCATGCCTTGAAACCATTTT+TGG - chr4_1:51558977-51558996 None:intergenic 35.0%
AGAATGCCATGATAAATGGA+AGG - chr4_1:51559023-51559042 None:intergenic 35.0%
GCTTAGAATGCCATGATAAA+TGG - chr4_1:51559027-51559046 None:intergenic 35.0%
CTTGTCCTGTAAAACCAAAA+TGG - chr4_1:51559107-51559126 None:intergenic 35.0%
!!! CATTTTGGTTTTACAGGACA+AGG + chr4_1:51559105-51559124 Msa0554290:intron 35.0%
! AAACAGCACTTGATTTGAGA+TGG - chr4_1:51559236-51559255 None:intergenic 35.0%
TCATTAAGACAAAACCCACT+TGG + chr4_1:51559275-51559294 Msa0554290:intron 35.0%
CATTAAGACAAAACCCACTT+GGG + chr4_1:51559276-51559295 Msa0554290:intron 35.0%
ATCATTAAGACAAGCAACCA+AGG + chr4_1:51559418-51559437 Msa0554290:intron 35.0%
ACAATTACTCATCAAGTCCT+TGG - chr4_1:51559438-51559457 None:intergenic 35.0%
AGCGCACAATATTTATTTGG+GGG + chr4_1:51559517-51559536 Msa0554290:intron 35.0%
TTAGGTGGTCACAATCATTT+GGG + chr4_1:51559744-51559763 Msa0554290:intron 35.0%
! CTTGGGTTGTTACAATCATT+TGG - chr4_1:51559888-51559907 None:intergenic 35.0%
!! CCAAAGAGTAATGGATTAGT+AGG - chr4_1:51559917-51559936 None:intergenic 35.0%
CCTACTAATCCATTACTCTT+TGG + chr4_1:51559914-51559933 Msa0554290:intron 35.0%
CTTTATGGTTTCCTTCTGAA+GGG - chr4_1:51559984-51560003 None:intergenic 35.0%
TCTTTATGGTTTCCTTCTGA+AGG - chr4_1:51559985-51560004 None:intergenic 35.0%
!! ATCTTACTTACCTTTTGGGA+TGG + chr4_1:51560011-51560030 Msa0554290:intron 35.0%
!!! TCTTACTTACCTTTTGGGAT+GGG + chr4_1:51560012-51560031 Msa0554290:intron 35.0%
AACAAAATACCCATCCCAAA+AGG - chr4_1:51560024-51560043 None:intergenic 35.0%
GTTCTGTCACTATATCTTCA+TGG + chr4_1:51560070-51560089 Msa0554290:intron 35.0%
GAGAATGATGAAAACAAAGG+TGG + chr4_1:51560252-51560271 Msa0554290:CDS 35.0%
ATTCTGACGAAGAACGTAAA+AGG + chr4_1:51560301-51560320 Msa0554290:CDS 35.0%
AGAACGTAAAAGGTGATTGA+CGG + chr4_1:51560311-51560330 Msa0554290:intron 35.0%
ACTCAAGGATTAAAAGTTGG+GGG + chr4_1:51560430-51560449 Msa0554290:intron 35.0%
AAAAGTTGGGGGTTATGTTA+CGG + chr4_1:51560441-51560460 Msa0554290:intron 35.0%
AACAGAATAAAACAGTGGAG+AGG - chr4_1:51560594-51560613 None:intergenic 35.0%
!! TCTCCACTGTTTTATTCTGT+TGG + chr4_1:51560593-51560612 Msa0554290:intron 35.0%
AGACCAACAGAATAAAACAG+TGG - chr4_1:51560599-51560618 None:intergenic 35.0%
!! TTCTGTTGGTCTTTCATAAC+TGG + chr4_1:51560607-51560626 Msa0554290:intron 35.0%
CTCCATTTGTTCATCATATC+TGG - chr4_1:51560657-51560676 None:intergenic 35.0%
CAGATATGATGAACAAATGG+AGG + chr4_1:51560655-51560674 Msa0554290:intron 35.0%
TACTTGAACAAGCTTATGAG+CGG + chr4_1:51560681-51560700 Msa0554290:CDS 35.0%
TGAGCGGTTTGTGATAAAAA+AGG + chr4_1:51560697-51560716 Msa0554290:CDS 35.0%
CGGTTTGTGATAAAAAAGGA+AGG + chr4_1:51560701-51560720 Msa0554290:CDS 35.0%
TCTCATAAATGGAGCAAATC+CGG - chr4_1:51560829-51560848 None:intergenic 35.0%
GCGATAGATTAGTGATTTAG+TGG + chr4_1:51560860-51560879 Msa0554290:intron 35.0%
TAAACAAGGTGATAGCTTAG+TGG - chr4_1:51560902-51560921 None:intergenic 35.0%
GCCCATTTATGAGATAAACA+AGG - chr4_1:51560916-51560935 None:intergenic 35.0%
TATATAACTCCCAAACCAGA+AGG - chr4_1:51560971-51560990 None:intergenic 35.0%
!! CTGGTTTGGGAGTTATATAA+AGG + chr4_1:51560972-51560991 Msa0554290:intron 35.0%
GGAAACTGGAATTAAAGGAA+TGG - chr4_1:51561049-51561068 None:intergenic 35.0%
GGGAAGAAATTAAAGGAAAC+TGG - chr4_1:51561063-51561082 None:intergenic 35.0%
!!! TATTGTTGGTTTTACCTGCT+TGG + chr4_1:51561156-51561175 Msa0554290:intron 35.0%
ACAAAAACACCAGTCCTAAA+GGG - chr4_1:51561186-51561205 None:intergenic 35.0%
!!! TCTATTACCTTTTGGCTTGT+AGG + chr4_1:51561281-51561300 Msa0554290:intron 35.0%
TCAAGAAGCAAATCCTTTGA+TGG + chr4_1:51561362-51561381 Msa0554290:CDS 35.0%
CATATTTGTGATCTCCTCTT+GGG - chr4_1:51561415-51561434 None:intergenic 35.0%
ACATATTTGTGATCTCCTCT+TGG - chr4_1:51561416-51561435 None:intergenic 35.0%
AAGAGGAGATCACAAATATG+TGG + chr4_1:51561415-51561434 Msa0554290:CDS 35.0%
CACAAATATGTGGTTTAGTC+AGG + chr4_1:51561425-51561444 Msa0554290:CDS 35.0%
! TTGATCTTTTCAGCAACAAG+AGG - chr4_1:51561537-51561556 None:intergenic 35.0%
! TAAGTACATGTTTGATGACC+AGG + chr4_1:51561806-51561825 Msa0554290:CDS 35.0%
! AAGTACATGTTTGATGACCA+GGG + chr4_1:51561807-51561826 Msa0554290:CDS 35.0%
! TCGGTCAATTTGCTTATTCT+TGG - chr4_1:51562063-51562082 None:intergenic 35.0%
! GAACAGCGTTTTTATAGAGT+CGG - chr4_1:51562082-51562101 None:intergenic 35.0%
AGATTGAAGTTGAAGGAGGA+GGG - chr4_1:51556163-51556182 None:intergenic 40.0%
GAAGAGATTGAAGTTGAAGG+AGG - chr4_1:51556167-51556186 None:intergenic 40.0%
CTTCACCAATCCATCAACAA+TGG + chr4_1:51556186-51556205 Msa0554290:exon 40.0%
GGATTCGAGGAAATGGAATT+TGG - chr4_1:51556317-51556336 None:intergenic 40.0%
! TTGTTGTGTGCTAGGTTTTC+AGG + chr4_1:51556766-51556785 Msa0554290:intron 40.0%
GTCTCAGGATTACAATTCTG+TGG + chr4_1:51556788-51556807 Msa0554290:CDS 40.0%
AGGATTACAATTCTGTGGTG+TGG + chr4_1:51556793-51556812 Msa0554290:CDS 40.0%
!!! AATCTGGTTTTGGCCATGTT+TGG + chr4_1:51556875-51556894 Msa0554290:intron 40.0%
! TCACCCTTTTATCTTTTGCC+AGG - chr4_1:51556969-51556988 None:intergenic 40.0%
ACACGAATGTACAAAAGGCA+TGG - chr4_1:51557051-51557070 None:intergenic 40.0%
GTTCACGTTTCATGTTCCAA+AGG - chr4_1:51557234-51557253 None:intergenic 40.0%
GGAACATGAAACGTGAACTT+TGG + chr4_1:51557236-51557255 Msa0554290:intron 40.0%
! ACTACCTCATCACTGTGTTT+TGG + chr4_1:51557892-51557911 Msa0554290:intron 40.0%
TTGTGCTACAGGTATGAAGA+TGG + chr4_1:51558163-51558182 Msa0554290:intron 40.0%
! TGGAAACACAACTTTGAGGA+AGG + chr4_1:51558183-51558202 Msa0554290:CDS 40.0%
AGCTGGATCAGTAAAGCTTA+TGG - chr4_1:51558272-51558291 None:intergenic 40.0%
TCCAGCTGATATACCAATCA+AGG + chr4_1:51558285-51558304 Msa0554290:CDS 40.0%
TCCTTGATTGGTATATCAGC+TGG - chr4_1:51558289-51558308 None:intergenic 40.0%
TTTGATTGTGGTTGTATGCC+AGG + chr4_1:51558418-51558437 Msa0554290:intron 40.0%
! CTTCACAGAGAGATTTTACC+TGG - chr4_1:51558439-51558458 None:intergenic 40.0%
! CTGTGAAGATTTGAGGGTTT+TGG + chr4_1:51558451-51558470 Msa0554290:CDS 40.0%
! GTGAAGATTTGAGGGTTTTG+GGG + chr4_1:51558453-51558472 Msa0554290:CDS 40.0%
! TGTATCTGCTGGTTATCTCT+AGG + chr4_1:51558619-51558638 Msa0554290:intron 40.0%
AGTTACCACTGAGTACTTTG+AGG + chr4_1:51558848-51558867 Msa0554290:intron 40.0%
GCTTGATCTCATCCACAAAA+AGG - chr4_1:51559068-51559087 None:intergenic 40.0%
! GCTCATTGCTATACCCATTT+TGG + chr4_1:51559090-51559109 Msa0554290:intron 40.0%
AAGCAAGGGAAAACAACTCA+TGG - chr4_1:51559180-51559199 None:intergenic 40.0%
! GTTTTCCCTTGCTTCTATGA+AGG + chr4_1:51559186-51559205 Msa0554290:CDS 40.0%
GCAAACCTTCATAGAAGCAA+GGG - chr4_1:51559194-51559213 None:intergenic 40.0%
AGCAAACCTTCATAGAAGCA+AGG - chr4_1:51559195-51559214 None:intergenic 40.0%
! ATTCTCTCTGGTGCCAATTT+GGG + chr4_1:51559360-51559379 Msa0554290:intron 40.0%
GCGCACAATATTTATTTGGG+GGG + chr4_1:51559518-51559537 Msa0554290:intron 40.0%
TCCTGAGAGTTTACTGTGAT+AGG + chr4_1:51559665-51559684 Msa0554290:intron 40.0%
TCCTATCACAGTAAACTCTC+AGG - chr4_1:51559669-51559688 None:intergenic 40.0%
GATAGGAGATCTACTGTGAT+TGG + chr4_1:51559682-51559701 Msa0554290:intron 40.0%
! CTTTTGAGCTAGTGAGTCTT+AGG + chr4_1:51559726-51559745 Msa0554290:intron 40.0%
CTTAGGTGGTCACAATCATT+TGG + chr4_1:51559743-51559762 Msa0554290:intron 40.0%
ATCCTTCTTACCCTAAAACC+CGG - chr4_1:51560175-51560194 None:intergenic 40.0%
!!! GTTTTAGGGTAAGAAGGATC+TGG + chr4_1:51560176-51560195 Msa0554290:intron 40.0%
GAACGTAAAAGGTGATTGAC+GGG + chr4_1:51560312-51560331 Msa0554290:intron 40.0%
TGCATAAGAGATACACTGGT+CGG - chr4_1:51560401-51560420 None:intergenic 40.0%
CTTGTGCATAAGAGATACAC+TGG - chr4_1:51560405-51560424 None:intergenic 40.0%
AAAGTTGGGGGTTATGTTAC+GGG + chr4_1:51560442-51560461 Msa0554290:intron 40.0%
! GGAAGGCATATTAAGTGAGA+GGG + chr4_1:51560494-51560513 Msa0554290:intron 40.0%
TAGATGTAGTTACACGAGTC+CGG + chr4_1:51560807-51560826 Msa0554290:intron 40.0%
GACAAAAACACCAGTCCTAA+AGG - chr4_1:51561187-51561206 None:intergenic 40.0%
CTTATGCTAAGAAGATGCTG+AGG + chr4_1:51561745-51561764 Msa0554290:CDS 40.0%
AGATGCTGAGGAAAAAGCAA+AGG + chr4_1:51561757-51561776 Msa0554290:CDS 40.0%
GATGCTGAGGAAAAAGCAAA+GGG + chr4_1:51561758-51561777 Msa0554290:CDS 40.0%
TGATACTAGACCTGCAAAGA+AGG + chr4_1:51561932-51561951 Msa0554290:CDS 40.0%
!! ATATAGCATTGGCCTTCTTG+CGG - chr4_1:51562013-51562032 None:intergenic 40.0%
TTGGAACGATCAGATATGTC+TGG - chr4_1:51562044-51562063 None:intergenic 40.0%
GAGATTGAAGTTGAAGGAGG+AGG - chr4_1:51556164-51556183 None:intergenic 45.0%
AGAACGGTAACCGTGTTCTT+TGG - chr4_1:51556263-51556282 None:intergenic 45.0%
GTTTCCATGATGCACGAGAA+CGG - chr4_1:51556279-51556298 None:intergenic 45.0%
TCCGATAACGAGATGATCGA+CGG - chr4_1:51556407-51556426 None:intergenic 45.0%
CATGATGGTTCTCCCAATGT+TGG + chr4_1:51556559-51556578 Msa0554290:CDS 45.0%
TGTGGTGTGGTGTATGAAGA+AGG + chr4_1:51556806-51556825 Msa0554290:CDS 45.0%
GAGGGACTAAAGCTGATAGT+TGG + chr4_1:51557313-51557332 Msa0554290:intron 45.0%
! CCACATAGGGCTTGTTTGTT+TGG - chr4_1:51557513-51557532 None:intergenic 45.0%
CCAAACAAACAAGCCCTATG+TGG + chr4_1:51557510-51557529 Msa0554290:intron 45.0%
GCAGTTGTTTGAGAAGGTTG+AGG + chr4_1:51557589-51557608 Msa0554290:intron 45.0%
GTTGTTTGAGAAGGTTGAGG+TGG + chr4_1:51557592-51557611 Msa0554290:intron 45.0%
TGCGAGGATCAATCTTAGCA+GGG - chr4_1:51557682-51557701 None:intergenic 45.0%
ATGCGAGGATCAATCTTAGC+AGG - chr4_1:51557683-51557702 None:intergenic 45.0%
TGCTTGATATCGAGAATGCG+AGG - chr4_1:51557698-51557717 None:intergenic 45.0%
TTCTGCTCAACCGATAGCTA+AGG + chr4_1:51557730-51557749 Msa0554290:CDS 45.0%
!! ATGCAGATGGTGGATGTACT+TGG + chr4_1:51557836-51557855 Msa0554290:intron 45.0%
!! AAGCAAAAGAGGCATCGTGA+CGG + chr4_1:51557866-51557885 Msa0554290:CDS 45.0%
TGTTTGGACAGATACTCCTC+TGG + chr4_1:51558225-51558244 Msa0554290:CDS 45.0%
! GATACTCCTCTGGAGATTCT+TGG + chr4_1:51558235-51558254 Msa0554290:CDS 45.0%
ACTGAACCAAGAATCTCCAG+AGG - chr4_1:51558244-51558263 None:intergenic 45.0%
GTTAGGTCGTGATCCTTGAT+TGG - chr4_1:51558301-51558320 None:intergenic 45.0%
TCACGACCTAACAACTGAAG+AGG + chr4_1:51558309-51558328 Msa0554290:CDS 45.0%
! ATCTGCTGGTTATCTCTAGG+TGG + chr4_1:51558622-51558641 Msa0554290:intron 45.0%
!! AGTAGCAGGTTCGGTCTTTT+TGG - chr4_1:51558679-51558698 None:intergenic 45.0%
GGTGGAAAATGAGCATGATG+TGG + chr4_1:51558707-51558726 Msa0554290:CDS 45.0%
GGAAAATGAGCATGATGTGG+TGG + chr4_1:51558710-51558729 Msa0554290:CDS 45.0%
GGAGGAACTGACAAATGCAA+TGG + chr4_1:51558761-51558780 Msa0554290:CDS 45.0%
!! ACCACTGAGTACTTTGAGGT+TGG + chr4_1:51558852-51558871 Msa0554290:intron 45.0%
! TCCAACCTCAAAGTACTCAG+TGG - chr4_1:51558856-51558875 None:intergenic 45.0%
! CAGCACTTGATTTGAGATGG+AGG - chr4_1:51559233-51559252 None:intergenic 45.0%
AAGACAAAACCCACTTGGGT+TGG + chr4_1:51559280-51559299 Msa0554290:intron 45.0%
ATCTCAGGTTCGATTCTCTC+TGG + chr4_1:51559348-51559367 Msa0554290:intron 45.0%
! GATTCTCTCTGGTGCCAATT+TGG + chr4_1:51559359-51559378 Msa0554290:intron 45.0%
CTAAACTAGCCCACCCAAAT+TGG - chr4_1:51559376-51559395 None:intergenic 45.0%
TTGAGCTAGTGAGTCTTAGG+TGG + chr4_1:51559729-51559748 Msa0554290:intron 45.0%
! TGTTCTTTTGGCCCTTCAGA+AGG + chr4_1:51559970-51559989 Msa0554290:intron 45.0%
CGTTTCTTGGTTGTTGTCAC+CGG + chr4_1:51560153-51560172 Msa0554290:intron 45.0%
GTTTCTTGGTTGTTGTCACC+GGG + chr4_1:51560154-51560173 Msa0554290:intron 45.0%
! GTTGTTGTCACCGGGTTTTA+GGG + chr4_1:51560162-51560181 Msa0554290:intron 45.0%
! GTTGACACCACTGACTATGA+AGG + chr4_1:51560204-51560223 Msa0554290:CDS 45.0%
TATGCACAAGCCTCAACTCA+AGG + chr4_1:51560415-51560434 Msa0554290:intron 45.0%
! GGGAAGGCATATTAAGTGAG+AGG + chr4_1:51560493-51560512 Msa0554290:intron 45.0%
AAGTTGGGAGTCTGCATCAT+AGG - chr4_1:51560759-51560778 None:intergenic 45.0%
! TGATGCAGACTCCCAACTTT+TGG + chr4_1:51560760-51560779 Msa0554290:CDS 45.0%
!! ACTCCCAACTTTTGGAGGTA+TGG + chr4_1:51560768-51560787 Msa0554290:intron 45.0%
GCTCCATACCTCCAAAAGTT+GGG - chr4_1:51560774-51560793 None:intergenic 45.0%
AGCTCCATACCTCCAAAAGT+TGG - chr4_1:51560775-51560794 None:intergenic 45.0%
AAAACACCAGTCCTAAAGGG+AGG - chr4_1:51561183-51561202 None:intergenic 45.0%
!!! TTACCTTTTGGCTTGTAGGC+TGG + chr4_1:51561285-51561304 Msa0554290:intron 45.0%
TCTGTAAGTGGCACCATCAA+AGG - chr4_1:51561378-51561397 None:intergenic 45.0%
!! TTGATGGTGCCACTTACAGA+TGG + chr4_1:51561378-51561397 Msa0554290:CDS 45.0%
! TGCCACTTACAGATGGTACA+GGG + chr4_1:51561385-51561404 Msa0554290:CDS 45.0%
TTTGTGATCTCCTCTTGGGT+GGG - chr4_1:51561411-51561430 None:intergenic 45.0%
ATTTGTGATCTCCTCTTGGG+TGG - chr4_1:51561412-51561431 None:intergenic 45.0%
TGTCTTTGCTGAAGCTGTAG+AGG + chr4_1:51561449-51561468 Msa0554290:CDS 45.0%
TTTGCTGAAGCTGTAGAGGA+AGG + chr4_1:51561453-51561472 Msa0554290:CDS 45.0%
GGATGACAGCGAGAATGAAA+TGG + chr4_1:51561488-51561507 Msa0554290:CDS 45.0%
GAATCCTCGGAATCAGTTTC+AGG - chr4_1:51561675-51561694 None:intergenic 45.0%
CTCATCAGATGACGAATCCT+CGG - chr4_1:51561688-51561707 None:intergenic 45.0%
GGATTCGTCATCTGATGAGT+CGG + chr4_1:51561689-51561708 Msa0554290:CDS 45.0%
TCCTCATCCAGAAACCACTT+GGG - chr4_1:51561837-51561856 None:intergenic 45.0%
TTCCTCATCCAGAAACCACT+TGG - chr4_1:51561838-51561857 None:intergenic 45.0%
TGACAGGCTTAACTGGTACA+CGG - chr4_1:51561869-51561888 None:intergenic 45.0%
TCTTTCGTGACAGGCTTAAC+TGG - chr4_1:51561876-51561895 None:intergenic 45.0%
AGTTAAGCCTGTCACGAAAG+AGG + chr4_1:51561875-51561894 Msa0554290:CDS 45.0%
TACTAGACCTGCAAAGAAGG+TGG + chr4_1:51561935-51561954 Msa0554290:CDS 45.0%
GATTGAGAAAGTCCGCAAGA+AGG + chr4_1:51561998-51562017 Msa0554290:CDS 45.0%
!! TGGCTGGTCTGATATAGCAT+TGG - chr4_1:51562024-51562043 None:intergenic 45.0%
AACGATCAGATATGTCTGGC+TGG - chr4_1:51562040-51562059 None:intergenic 45.0%
GTTACCGTTCTCGTGCATCA+TGG + chr4_1:51556272-51556291 Msa0554290:CDS 50.0%
AGCGTGAGGATTCGAGGAAA+TGG - chr4_1:51556324-51556343 None:intergenic 50.0%
ATCGACGGGAACACGTTGAA+CGG - chr4_1:51556392-51556411 None:intergenic 50.0%
CCGATAACGAGATGATCGAC+GGG - chr4_1:51556406-51556425 None:intergenic 50.0%
CCCGTCGATCATCTCGTTAT+CGG + chr4_1:51556403-51556422 Msa0554290:CDS 50.0%
GCTCCGATTAAACCACTTCG+AGG + chr4_1:51556436-51556455 Msa0554290:CDS 50.0%
GCGCCTCGAAGTGGTTTAAT+CGG - chr4_1:51556442-51556461 None:intergenic 50.0%
GATGGTTCTCCCAATGTTGG+TGG + chr4_1:51556562-51556581 Msa0554290:CDS 50.0%
!! TCCCAATGTTGGTGGTGCTT+GGG + chr4_1:51556570-51556589 Msa0554290:CDS 50.0%
!!! GTGCTAGGTTTTCAGGTCTC+AGG + chr4_1:51556773-51556792 Msa0554290:intron 50.0%
GGTTGAGGTGGAAAAACCAC+CGG + chr4_1:51557604-51557623 Msa0554290:CDS 50.0%
GCAGATTCAGAACGACTAGC+CGG - chr4_1:51557626-51557645 None:intergenic 50.0%
GCGAGGATCAATCTTAGCAG+GGG - chr4_1:51557681-51557700 None:intergenic 50.0%
!! AGCAAAAGAGGCATCGTGAC+GGG + chr4_1:51557867-51557886 Msa0554290:CDS 50.0%
! TGCTGGTTATCTCTAGGTGG+CGG + chr4_1:51558625-51558644 Msa0554290:intron 50.0%
CTCAGCTGTAGTAGCAGGTT+CGG - chr4_1:51558688-51558707 None:intergenic 50.0%
!! TGGTTTTACAGGACAAGGCG+CGG + chr4_1:51559110-51559129 Msa0554290:intron 50.0%
GAAAGCTACAGGGATGCAAG+TGG + chr4_1:51559132-51559151 Msa0554290:CDS 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + chr4_1:51559294-51559313 Msa0554290:intron 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + chr4_1:51559299-51559318 Msa0554290:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + chr4_1:51559300-51559319 Msa0554290:intron 50.0%
GAATCGAACCTGAGATCTCG+AGG - chr4_1:51559344-51559363 None:intergenic 50.0%
! TCTCTGGTGCCAATTTGGGT+GGG + chr4_1:51559364-51559383 Msa0554290:intron 50.0%
! GGTTGTTGTCACCGGGTTTT+AGG + chr4_1:51560161-51560180 Msa0554290:intron 50.0%
!!! CACCGGGTTTTAGGGTAAGA+AGG + chr4_1:51560170-51560189 Msa0554290:intron 50.0%
! GACACCACTGACTATGAAGG+TGG + chr4_1:51560207-51560226 Msa0554290:CDS 50.0%
ACTGACTATGAAGGTGGCGA+GGG + chr4_1:51560213-51560232 Msa0554290:CDS 50.0%
! TGCAGACTCCCAACTTTTGG+AGG + chr4_1:51560763-51560782 Msa0554290:CDS 50.0%
GATTTAGTGGCTCCCACTAG+TGG + chr4_1:51560873-51560892 Msa0554290:intron 50.0%
GCTTAGTGGCATCCACTAGT+GGG - chr4_1:51560888-51560907 None:intergenic 50.0%
AGCTTAGTGGCATCCACTAG+TGG - chr4_1:51560889-51560908 None:intergenic 50.0%
TCACCAGCCTACAAGCCAAA+AGG - chr4_1:51561291-51561310 None:intergenic 50.0%
!! GTGCCACTTACAGATGGTAC+AGG + chr4_1:51561384-51561403 Msa0554290:CDS 50.0%
!! AGAGGAAGGAGGCTTTGAGA+AGG + chr4_1:51561467-51561486 Msa0554290:CDS 50.0%
! TCGGAATCAGTTTCAGGTGC+AGG - chr4_1:51561669-51561688 None:intergenic 50.0%
! TGCACCTGAAACTGATTCCG+AGG + chr4_1:51561668-51561687 Msa0554290:CDS 50.0%
TTCGTCATCTGATGAGTCGG+AGG + chr4_1:51561692-51561711 Msa0554290:CDS 50.0%
GCAACATCCTCTTTCGTGAC+AGG - chr4_1:51561885-51561904 None:intergenic 50.0%
AACACGCTTCTTCCGTGCTT+TGG - chr4_1:51561967-51561986 None:intergenic 50.0%
! GGAAGAAGCGTGTTGCAATG+AGG + chr4_1:51561973-51561992 Msa0554290:CDS 50.0%
GACTTGCATCCAACCACCAG+GGG - chr4_1:51556368-51556387 None:intergenic 55.0%
CGACTTGCATCCAACCACCA+GGG - chr4_1:51556369-51556388 None:intergenic 55.0%
ATAGCAATCGCGCCTCGAAG+TGG - chr4_1:51556451-51556470 None:intergenic 55.0%
! TCGAGGCGCGATTGCTATTC+AGG + chr4_1:51556453-51556472 Msa0554290:CDS 55.0%
!! CTCCCAATGTTGGTGGTGCT+TGG + chr4_1:51556569-51556588 Msa0554290:CDS 55.0%
GCCCAAGCACCACCAACATT+GGG - chr4_1:51556574-51556593 None:intergenic 55.0%
AGCCCAAGCACCACCAACAT+TGG - chr4_1:51556575-51556594 None:intergenic 55.0%
! GATTCAGAACGACTAGCCGG+TGG - chr4_1:51557623-51557642 None:intergenic 55.0%
!! GCAGGTTCGGTCTTTTTGGC+AGG - chr4_1:51558675-51558694 None:intergenic 55.0%
CGAACCTGCTACTACAGCTG+AGG + chr4_1:51558686-51558705 Msa0554290:CDS 55.0%
ACCTGCTACTACAGCTGAGG+TGG + chr4_1:51558689-51558708 Msa0554290:CDS 55.0%
TCCACCTCAGCTGTAGTAGC+AGG - chr4_1:51558693-51558712 None:intergenic 55.0%
ACAAGGCGCGGAAAGCTACA+GGG + chr4_1:51559122-51559141 Msa0554290:CDS 55.0%
ACCACTAGGCCAACCCAAGT+GGG - chr4_1:51559292-51559311 None:intergenic 55.0%
TACCACTAGGCCAACCCAAG+TGG - chr4_1:51559293-51559312 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG - chr4_1:51559306-51559325 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG + chr4_1:51559306-51559325 Msa0554290:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG + chr4_1:51559307-51559326 Msa0554290:intron 55.0%
ATGCTCCTCCTCGAGATCTC+AGG + chr4_1:51559333-51559352 Msa0554290:intron 55.0%
TCGAACCTGAGATCTCGAGG+AGG - chr4_1:51559341-51559360 None:intergenic 55.0%
! CTCTCTGGTGCCAATTTGGG+TGG + chr4_1:51559363-51559382 Msa0554290:intron 55.0%
CTCGCCACCTTCATAGTCAG+TGG - chr4_1:51560214-51560233 None:intergenic 55.0%
! CACTGACTATGAAGGTGGCG+AGG + chr4_1:51560212-51560231 Msa0554290:CDS 55.0%
ACCTGCTTGGACCTCCCTTT+AGG + chr4_1:51561169-51561188 Msa0554290:intron 55.0%
TCCTAAAGGGAGGTCCAAGC+AGG - chr4_1:51561173-51561192 None:intergenic 55.0%
!! CTTGGACCTCCCTTTAGGAC+TGG + chr4_1:51561174-51561193 Msa0554290:intron 55.0%
GGCCCTGTACCATCTGTAAG+TGG - chr4_1:51561390-51561409 None:intergenic 55.0%
GCTGAAGCTGTAGAGGAAGG+AGG + chr4_1:51561456-51561475 Msa0554290:CDS 55.0%
ATGACCAGGGATTGCCCAAG+TGG + chr4_1:51561820-51561839 Msa0554290:CDS 55.0%
GAAACCACTTGGGCAATCCC+TGG - chr4_1:51561827-51561846 None:intergenic 55.0%
GGGATTGCCCAAGTGGTTTC+TGG + chr4_1:51561827-51561846 Msa0554290:CDS 55.0%
! GCCCAAGTGGTTTCTGGATG+AGG + chr4_1:51561833-51561852 Msa0554290:CDS 55.0%
ACCTGCAAAGAAGGTGGCTG+AGG + chr4_1:51561941-51561960 Msa0554290:CDS 55.0%
GAACGGAGCGTGAGGATTCG+AGG - chr4_1:51556330-51556349 None:intergenic 60.0%
GAGATCGAGAACGGAGCGTG+AGG - chr4_1:51556338-51556357 None:intergenic 60.0%
TTGCATCCAACCACCAGGGG+CGG - chr4_1:51556365-51556384 None:intergenic 60.0%
GCGACTTGCATCCAACCACC+AGG - chr4_1:51556370-51556389 None:intergenic 60.0%
GACAAGGCGCGGAAAGCTAC+AGG + chr4_1:51559121-51559140 Msa0554290:CDS 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG + chr4_1:51559288-51559307 Msa0554290:intron 60.0%
! TCGAGGAGGAGCATACTCCC+AGG - chr4_1:51559327-51559346 None:intergenic 60.0%
TGAAGGTGGCGAGGGTGAAG+TGG + chr4_1:51560221-51560240 Msa0554290:CDS 60.0%
GCCTCAGCCACCTTCTTTGC+AGG - chr4_1:51561945-51561964 None:intergenic 60.0%
AGGTGGCTGAGGCCAAAGCA+CGG + chr4_1:51561952-51561971 Msa0554290:CDS 60.0%
GGCGGCGCAGAGATCGAGAA+CGG - chr4_1:51556347-51556366 None:intergenic 65.0%
TGGTACAGGGCCCACCCAAG+AGG + chr4_1:51561398-51561417 Msa0554290:CDS 65.0%
CTCGATCTCTGCGCCGCCCC+TGG + chr4_1:51556349-51556368 Msa0554290:CDS 75.0%
GATCTCTGCGCCGCCCCTGG+TGG + chr4_1:51556352-51556371 Msa0554290:CDS 75.0%
TCTGCGCCGCCCCTGGTGGT+TGG + chr4_1:51556356-51556375 Msa0554290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51556151 51562121 51556151 ID=Msa0554290;Name=Msa0554290
chr4_1 mRNA 51556151 51562121 51556151 ID=Msa0554290-mRNA-1;Parent=Msa0554290;Name=Msa0554290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=54|1|0.90|1|1|1|11|0|772
chr4_1 exon 51556151 51556684 51556151 ID=Msa0554290-mRNA-1:exon:14734;Parent=Msa0554290-mRNA-1
chr4_1 exon 51556780 51556827 51556780 ID=Msa0554290-mRNA-1:exon:14735;Parent=Msa0554290-mRNA-1
chr4_1 exon 51557593 51557751 51557593 ID=Msa0554290-mRNA-1:exon:14736;Parent=Msa0554290-mRNA-1
chr4_1 exon 51557842 51557888 51557842 ID=Msa0554290-mRNA-1:exon:14737;Parent=Msa0554290-mRNA-1
chr4_1 exon 51558174 51558330 51558174 ID=Msa0554290-mRNA-1:exon:14738;Parent=Msa0554290-mRNA-1
chr4_1 exon 51558440 51558501 51558440 ID=Msa0554290-mRNA-1:exon:14739;Parent=Msa0554290-mRNA-1
chr4_1 exon 51558641 51558833 51558641 ID=Msa0554290-mRNA-1:exon:14740;Parent=Msa0554290-mRNA-1
chr4_1 exon 51559121 51559207 51559121 ID=Msa0554290-mRNA-1:exon:14741;Parent=Msa0554290-mRNA-1
chr4_1 exon 51560183 51560322 51560183 ID=Msa0554290-mRNA-1:exon:14742;Parent=Msa0554290-mRNA-1
chr4_1 exon 51560658 51560784 51560658 ID=Msa0554290-mRNA-1:exon:14743;Parent=Msa0554290-mRNA-1
chr4_1 exon 51561303 51562121 51561303 ID=Msa0554290-mRNA-1:exon:14744;Parent=Msa0554290-mRNA-1
chr4_1 five_prime_UTR 51556151 51556204 51556151 ID=Msa0554290-mRNA-1:five_prime_utr;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51556205 51556684 51556205 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51556780 51556827 51556780 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51557593 51557751 51557593 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51557842 51557888 51557842 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51558174 51558330 51558174 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51558440 51558501 51558440 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51558641 51558833 51558641 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51559121 51559207 51559121 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51560183 51560322 51560183 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51560658 51560784 51560658 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
chr4_1 CDS 51561303 51562121 51561303 ID=Msa0554290-mRNA-1:cds;Parent=Msa0554290-mRNA-1
Gene Sequence

>Msa0554290

ATGGGTAAAGCAAAAGCAAAAGGAAAACATCGTTTAGACAAATACTACTACTTAGCCAAAGAACACGGTTACCGTTCTCGTGCATCATGGAAACTCGTTCAAATCAATTCCAAATTCCATTTCCTCGAATCCTCACGCTCCGTTCTCGATCTCTGCGCCGCCCCTGGTGGTTGGATGCAAGTCGCCGTTCAACGTGTTCCCGTCGATCATCTCGTTATCGGAGTCGATCTAGCTCCGATTAAACCACTTCGAGGCGCGATTGCTATTCAGGAAGATATTACTAGACCTGAATGTAAATCTAGAGTTAGGAAAATTATGAATGAAAATGGTTATCGTGCTTTTGATGTTATTCTTCATGATGGTTCTCCCAATGTTGGTGGTGCTTGGGCTCAAGAAGCTACTAGTCAGAATTCGCTTGTTATTGATGCTGTTAAGCTTGCTACTCAGTTTTTAGCTCCTAAGGGAACTTTTGTTACTAAGGTTTTCAGGTCTCAGGATTACAATTCTGTGGTGTGGTGTATGAAGAAGTTGTTTGAGAAGGTTGAGGTGGAAAAACCACCGGCTAGTCGTTCTGAATCTGCTGAGATATATATTTTGGGGATTAAGTATTTAGCCCCTGCTAAGATTGATCCTCGCATTCTCGATATCAAGCATCTTTTTGAGGCTTCTGCTCAACCGATAGCTAAGATGGTGGATGTACTTGGAAACAATAAGCAAAAGAGGCATCGTGACGGGTATGAAGATGGAAACACAACTTTGAGGAAGGTGTCTTCAGCTGCAAATTTTGTTTGGACAGATACTCCTCTGGAGATTCTTGGTTCAGTTACTTCCATAAGCTTTACTGATCCAGCTGATATACCAATCAAGGATCACGACCTAACAACTGAAGAGGTAAAATCTCTCTGTGAAGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGGATTAACATTAGAAAAGCTCTATCACCTGCCAAAAAGACCGAACCTGCTACTACAGCTGAGGTGGAAAATGAGCATGATGTGGTGGATGAAGATGATAGAATACTCAACGAAATGGAGGAACTGACAAATGCAATGGACCGCAAGAAGAAGCGTGAAAAAAAGATTCTATCAAAAAGAAGAGCCAAGGACAAGGCGCGGAAAGCTACAGGGATGCAAGTGGATGCAGTAGAAGATTATGTTGACCATGAGTTGTTTTCCCTTGCTTCTATGAAGGGTAAGAAGGATCTGGTAGCTGTTGACACCACTGACTATGAAGGTGGCGAGGGTGAAGTGGATGACAGTGAGAATGATGAAAACAAAGGTGGCTCAGAGCATTCATCTAGTGACTTAGATTCTGACGAAGAACGTAAAAGATATGATGAACAAATGGAGGATTTACTTGAACAAGCTTATGAGCGGTTTGTGATAAAAAAGGAAGGCACTGCACAGCAGCGTAAGCGTATCAAGAAATCCTATGATGCAGACTCCCAACTTTTGGAGGCTGGTGAAGATGATGACATTATTCCGTCCAAATATGATTCAGATGAAGATCAGGATGTTCAAGAAGCAAATCCTTTGATGGTGCCACTTACAGATGGTACAGGGCCCACCCAAGAGGAGATCACAAATATGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAGGCTTTGAGAAGGATGACAGCGAGAATGAAATGGATATTGATGGATTGAAGGAGAAGCCTCTTGTTGCTGAAAAGATCAAAGAAAATAAGCTAATTGCTGAAAAGATCAAAGAAAATAAAACGGCTACTTCTGTCGAGACAGATCGCAGTCAATCTAAAGCATCCAATGAAATGGATTTTGAGATTGTTCCTGCACCTGAAACTGATTCCGAGGATTCGTCATCTGATGAGTCGGAGGATGATGTTGAAAAAAAAGCTGAGATACTAGCTTATGCTAAGAAGATGCTGAGGAAAAAGCAAAGGGAACAGATGCTAGATGATGCATATAATAAGTACATGTTTGATGACCAGGGATTGCCCAAGTGGTTTCTGGATGAGGAAAGAAAACACCGTGTACCAGTTAAGCCTGTCACGAAAGAGGATGTTGCTGCTATGAAAGCACAATTTAAAGCAATTGATACTAGACCTGCAAAGAAGGTGGCTGAGGCCAAAGCACGGAAGAAGCGTGTTGCAATGAGGAAGATTGAGAAAGTCCGCAAGAAGGCCAATGCTATATCAGACCAGCCAGACATATCTGATCGTTCCAAGAATAAGCAAATTGACCGACTCTATAAAAACGCTGTTCCAAAAAGGCCAATGCTATAA
Protein sequence

>Msa0554290

MGKAKAKGKHRLDKYYYLAKEHGYRSRASWKLVQINSKFHFLESSRSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIKPLRGAIAIQEDITRPECKSRVRKIMNENGYRAFDVILHDGSPNVGGAWAQEATSQNSLVIDAVKLATQFLAPKGTFVTKVFRSQDYNSVVWCMKKLFEKVEVEKPPASRSESAEIYILGIKYLAPAKIDPRILDIKHLFEASAQPIAKMVDVLGNNKQKRHRDGYEDGNTTLRKVSSAANFVWTDTPLEILGSVTSISFTDPADIPIKDHDLTTEEVKSLCEDLRVLGKQDFKHLLKWRINIRKALSPAKKTEPATTAEVENEHDVVDEDDRILNEMEELTNAMDRKKKREKKILSKRRAKDKARKATGMQVDAVEDYVDHELFSLASMKGKKDLVAVDTTDYEGGEGEVDDSENDENKGGSEHSSSDLDSDEERKRYDEQMEDLLEQAYERFVIKKEGTAQQRKRIKKSYDADSQLLEAGEDDDIIPSKYDSDEDQDVQEANPLMVPLTDGTGPTQEEITNMWFSQDVFAEAVEEGGFEKDDSENEMDIDGLKEKPLVAEKIKENKLIAEKIKENKTATSVETDRSQSKASNEMDFEIVPAPETDSEDSSSDESEDDVEKKAEILAYAKKMLRKKQREQMLDDAYNKYMFDDQGLPKWFLDEERKHRVPVKPVTKEDVAAMKAQFKAIDTRPAKKVAEAKARKKRVAMRKIEKVRKKANAISDQPDISDRSKNKQIDRLYKNAVPKRPML*