Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719910 | GAU23336.1 | 73.431 | 1020 | 174 | 14 | 39 | 1008 | 1 | 973 | 0.0 | 1350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719910 | sp|Q9FKP5|UBP17_ARATH | 37.960 | 598 | 237 | 20 | 17 | 567 | 1 | 511 | 1.21e-86 | 297 |
Msa0719910 | sp|Q9FKP5|UBP17_ARATH | 46.063 | 254 | 94 | 6 | 667 | 919 | 508 | 719 | 6.35e-50 | 192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719910 | A0A2Z6LWE3 | 73.431 | 1020 | 174 | 14 | 39 | 1008 | 1 | 973 | 0.0 | 1350 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0719910 | Msa0804680 | 0.899397 | 2.064370e-77 | -8.615850e-47 |
Msa0719910 | Msa0847930 | 0.977311 | 1.580892e-143 | -8.615850e-47 |
Msa0719910 | Msa1008490 | 0.824643 | 7.221488e-54 | -8.615850e-47 |
Msa0719910 | Msa1098560 | 0.801008 | 1.102742e-48 | -8.615850e-47 |
Msa0719910 | Msa1240310 | 0.811447 | 6.968929e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719910 | MtrunA17_Chr5g0412381 | 85.878 | 609 | 41 | 5 | 1 | 567 | 1 | 606 | 0.0 | 966 |
Msa0719910 | MtrunA17_Chr5g0412381 | 97.929 | 338 | 6 | 1 | 671 | 1008 | 607 | 943 | 0.0 | 629 |
Msa0719910 | MtrunA17_Chr3g0133061 | 52.326 | 258 | 91 | 5 | 671 | 919 | 769 | 1003 | 1.15e-60 | 226 |
Msa0719910 | MtrunA17_Chr3g0133061 | 55.769 | 208 | 61 | 5 | 387 | 567 | 565 | 768 | 5.77e-57 | 214 |
Msa0719910 | MtrunA17_Chr3g0133061 | 36.879 | 141 | 66 | 4 | 19 | 159 | 24 | 141 | 1.47e-17 | 88.6 |
Msa0719910 | MtrunA17_Chr5g0427301 | 56.098 | 205 | 65 | 5 | 387 | 567 | 523 | 726 | 2.89e-59 | 221 |
Msa0719910 | MtrunA17_Chr5g0427301 | 45.122 | 246 | 117 | 5 | 671 | 913 | 727 | 957 | 3.42e-49 | 189 |
Msa0719910 | MtrunA17_Chr5g0427301 | 39.877 | 163 | 72 | 6 | 1 | 139 | 1 | 161 | 4.19e-23 | 106 |
Msa0719910 | MtrunA17_Chr2g0313171 | 45.059 | 253 | 120 | 6 | 671 | 909 | 650 | 897 | 1.91e-53 | 202 |
Msa0719910 | MtrunA17_Chr2g0313171 | 44.019 | 209 | 91 | 4 | 384 | 567 | 442 | 649 | 1.49e-39 | 159 |
Msa0719910 | MtrunA17_Chr2g0313171 | 34.906 | 106 | 53 | 2 | 28 | 126 | 30 | 126 | 1.03e-12 | 72.4 |
Msa0719910 | MtrunA17_Chr1g0150541 | 56.667 | 150 | 64 | 1 | 671 | 820 | 367 | 515 | 1.26e-46 | 180 |
Msa0719910 | MtrunA17_Chr1g0150541 | 35.154 | 293 | 118 | 10 | 387 | 641 | 162 | 420 | 6.56e-37 | 150 |
Msa0719910 | MtrunA17_Chr2g0312901 | 42.424 | 132 | 72 | 3 | 671 | 801 | 210 | 338 | 1.46e-21 | 100 |
Msa0719910 | MtrunA17_Chr2g0312901 | 27.660 | 188 | 108 | 5 | 405 | 565 | 21 | 207 | 3.41e-13 | 73.9 |
Msa0719910 | MtrunA17_Chr4g0074041 | 42.975 | 121 | 66 | 2 | 671 | 790 | 277 | 395 | 3.10e-20 | 97.1 |
Msa0719910 | MtrunA17_Chr4g0074041 | 36.585 | 123 | 75 | 3 | 447 | 567 | 155 | 276 | 3.24e-15 | 80.5 |
Msa0719910 | MtrunA17_Chr6g0458421 | 43.902 | 123 | 64 | 4 | 671 | 791 | 209 | 328 | 1.30e-18 | 90.9 |
Msa0719910 | MtrunA17_Chr6g0458421 | 31.933 | 119 | 77 | 3 | 447 | 565 | 92 | 206 | 3.15e-11 | 67.4 |
Msa0719910 | MtrunA17_Chr6g0458431 | 43.089 | 123 | 65 | 4 | 671 | 791 | 274 | 393 | 1.54e-17 | 87.8 |
Msa0719910 | MtrunA17_Chr2g0322211 | 40.000 | 125 | 69 | 3 | 671 | 792 | 742 | 863 | 4.42e-17 | 86.7 |
Msa0719910 | MtrunA17_Chr5g0411271 | 40.476 | 126 | 68 | 4 | 671 | 791 | 327 | 450 | 4.54e-17 | 86.3 |
Msa0719910 | MtrunA17_Chr6g0458441 | 42.276 | 123 | 66 | 4 | 671 | 791 | 307 | 426 | 5.73e-17 | 85.9 |
Msa0719910 | MtrunA17_Chr6g0458441 | 32.773 | 119 | 76 | 3 | 447 | 565 | 190 | 304 | 2.88e-11 | 67.8 |
Msa0719910 | MtrunA17_Chr4g0062561 | 41.353 | 133 | 70 | 4 | 659 | 790 | 415 | 540 | 1.57e-16 | 85.1 |
Msa0719910 | MtrunA17_Chr4g0062561 | 33.835 | 133 | 82 | 3 | 663 | 795 | 731 | 857 | 1.02e-12 | 72.4 |
Msa0719910 | MtrunA17_Chr4g0062491 | 32.484 | 157 | 89 | 5 | 665 | 810 | 163 | 313 | 4.65e-14 | 74.7 |
Msa0719910 | MtrunA17_Chr1g0149991 | 31.206 | 141 | 72 | 5 | 671 | 790 | 388 | 524 | 3.02e-13 | 73.6 |
Msa0719910 | MtrunA17_Chr7g0267641 | 35.075 | 134 | 78 | 5 | 671 | 798 | 816 | 946 | 1.41e-12 | 72.0 |
Msa0719910 | MtrunA17_Chr8g0366721 | 32.117 | 137 | 86 | 3 | 671 | 802 | 376 | 510 | 4.98e-12 | 69.7 |
Msa0719910 | MtrunA17_Chr4g0064671 | 28.859 | 149 | 77 | 4 | 667 | 790 | 101 | 245 | 6.94e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719910 | AT5G65450.2 | 38.033 | 610 | 244 | 20 | 5 | 567 | 8 | 530 | 3.20e-90 | 305 |
Msa0719910 | AT5G65450.2 | 46.063 | 254 | 94 | 6 | 667 | 919 | 527 | 738 | 9.59e-51 | 192 |
Msa0719910 | AT5G65450.1 | 37.960 | 598 | 237 | 20 | 17 | 567 | 1 | 511 | 1.23e-87 | 297 |
Msa0719910 | AT5G65450.1 | 46.063 | 254 | 94 | 6 | 667 | 919 | 508 | 719 | 6.45e-51 | 192 |
Msa0719910 | AT4G24560.1 | 52.451 | 204 | 72 | 5 | 387 | 566 | 524 | 726 | 8.27e-49 | 189 |
Msa0719910 | AT4G24560.1 | 40.873 | 252 | 134 | 3 | 671 | 922 | 728 | 964 | 2.04e-47 | 184 |
Msa0719910 | AT4G24560.1 | 45.283 | 106 | 42 | 2 | 22 | 127 | 25 | 114 | 3.87e-20 | 97.1 |
Msa0719910 | AT1G17110.3 | 41.393 | 244 | 92 | 4 | 671 | 909 | 624 | 821 | 1.93e-47 | 184 |
Msa0719910 | AT1G17110.3 | 41.627 | 209 | 96 | 4 | 384 | 567 | 416 | 623 | 1.52e-37 | 152 |
Msa0719910 | AT1G17110.3 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 3.99e-14 | 77.8 |
Msa0719910 | AT1G17110.1 | 41.393 | 244 | 92 | 4 | 671 | 909 | 624 | 821 | 1.93e-47 | 184 |
Msa0719910 | AT1G17110.1 | 41.627 | 209 | 96 | 4 | 384 | 567 | 416 | 623 | 1.52e-37 | 152 |
Msa0719910 | AT1G17110.1 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 3.99e-14 | 77.8 |
Msa0719910 | AT1G17110.2 | 40.741 | 243 | 95 | 3 | 671 | 909 | 628 | 825 | 2.17e-47 | 184 |
Msa0719910 | AT1G17110.2 | 41.860 | 215 | 98 | 5 | 378 | 567 | 415 | 627 | 4.48e-37 | 151 |
Msa0719910 | AT1G17110.2 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 4.10e-14 | 77.4 |
Msa0719910 | AT2G24640.2 | 62.400 | 125 | 47 | 0 | 671 | 795 | 190 | 314 | 5.72e-46 | 173 |
Msa0719910 | AT2G24640.2 | 42.328 | 189 | 85 | 4 | 403 | 567 | 1 | 189 | 5.30e-36 | 144 |
Msa0719910 | AT2G24640.1 | 62.400 | 125 | 47 | 0 | 671 | 795 | 360 | 484 | 7.14e-45 | 173 |
Msa0719910 | AT2G24640.1 | 34.069 | 317 | 182 | 6 | 275 | 567 | 46 | 359 | 7.71e-42 | 164 |
Msa0719910 | AT4G31670.1 | 61.667 | 120 | 46 | 0 | 671 | 790 | 354 | 473 | 2.09e-42 | 165 |
Msa0719910 | AT4G31670.1 | 42.718 | 206 | 92 | 5 | 387 | 567 | 149 | 353 | 9.48e-41 | 160 |
Msa0719910 | AT5G57990.1 | 39.860 | 143 | 80 | 2 | 671 | 809 | 292 | 432 | 9.38e-24 | 108 |
Msa0719910 | AT5G57990.1 | 33.871 | 124 | 77 | 4 | 447 | 567 | 170 | 291 | 2.02e-12 | 72.0 |
Msa0719910 | AT3G14400.1 | 41.259 | 143 | 75 | 4 | 671 | 806 | 213 | 353 | 1.42e-21 | 101 |
Msa0719910 | AT3G14400.1 | 34.711 | 121 | 75 | 2 | 448 | 565 | 94 | 213 | 4.70e-13 | 73.9 |
Msa0719910 | AT5G46740.2 | 40.323 | 124 | 68 | 4 | 671 | 790 | 138 | 259 | 1.15e-15 | 81.6 |
Msa0719910 | AT5G46740.1 | 40.323 | 124 | 68 | 4 | 671 | 790 | 347 | 468 | 2.02e-15 | 81.6 |
Msa0719910 | AT2G32780.1 | 37.121 | 132 | 62 | 4 | 677 | 790 | 954 | 1082 | 4.15e-15 | 80.9 |
Msa0719910 | AT1G04860.1 | 39.062 | 128 | 61 | 4 | 677 | 790 | 832 | 956 | 1.05e-14 | 79.3 |
Msa0719910 | AT4G10590.4 | 37.500 | 128 | 73 | 4 | 667 | 790 | 769 | 893 | 2.91e-13 | 74.7 |
Msa0719910 | AT4G10590.3 | 37.500 | 128 | 73 | 4 | 667 | 790 | 769 | 893 | 2.91e-13 | 74.7 |
Msa0719910 | AT4G10590.1 | 37.500 | 128 | 73 | 4 | 667 | 790 | 769 | 893 | 2.91e-13 | 74.7 |
Msa0719910 | AT4G10590.2 | 37.500 | 128 | 73 | 4 | 667 | 790 | 769 | 893 | 2.91e-13 | 74.7 |
Msa0719910 | AT4G17895.1 | 34.586 | 133 | 81 | 3 | 671 | 799 | 354 | 484 | 5.49e-12 | 70.5 |
Msa0719910 | AT2G40930.1 | 35.115 | 131 | 77 | 5 | 667 | 792 | 790 | 917 | 8.89e-11 | 66.6 |
Msa0719910 | AT2G40930.2 | 35.115 | 131 | 77 | 5 | 667 | 792 | 790 | 917 | 8.89e-11 | 66.6 |
Msa0719910 | AT1G32850.1 | 34.677 | 124 | 74 | 4 | 671 | 790 | 759 | 879 | 9.06e-11 | 66.6 |
Find 236 sgRNAs with CRISPR-Local
Find 613 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTATTTGTTATTGGTTT+TGG | 0.121892 | 5_1:+15581258 | Msa0719910:CDS |
AATACGATTGTAAGAATATT+TGG | 0.152865 | 5_1:-15587604 | None:intergenic |
ATTTACAGCGCCTGAAATTT+TGG | 0.163683 | 5_1:+15584856 | Msa0719910:CDS |
AGGTTTGGTTTATTTGTTAT+TGG | 0.215145 | 5_1:+15581252 | Msa0719910:CDS |
CTTACTGAACCCAGGGGTTT+TGG | 0.224633 | 5_1:-15588846 | None:intergenic |
TTATCTTTATCCAAAATTTC+AGG | 0.225753 | 5_1:-15584866 | None:intergenic |
CAGTATTGTCAACTTCTTCT+TGG | 0.226243 | 5_1:-15587575 | None:intergenic |
CACTTAGAAGTGTCTGTTAT+TGG | 0.226390 | 5_1:-15582909 | None:intergenic |
CTCTTGATGCGGGGCGCAAC+TGG | 0.242808 | 5_1:-15585204 | None:intergenic |
GTTATCCTATAAGGGCAAAA+TGG | 0.243437 | 5_1:-15581119 | None:intergenic |
TAGTTGAATCTCCATTCTTC+TGG | 0.247696 | 5_1:-15589053 | None:intergenic |
ACTCTCATTGGATACACTTT+TGG | 0.259420 | 5_1:+15584577 | Msa0719910:CDS |
AGCAAAAGGGTTATCCTATA+AGG | 0.274951 | 5_1:-15581128 | None:intergenic |
AATCGTATTAAAACGATTTC+AGG | 0.276311 | 5_1:+15587618 | Msa0719910:CDS |
ACAAGATACTACTGCTTCTA+TGG | 0.281969 | 5_1:+15581348 | Msa0719910:CDS |
CTTTATCTTCCGAGTCTTGC+TGG | 0.282680 | 5_1:-15589325 | None:intergenic |
AACTCAGATTTGGCCATAAA+AGG | 0.294284 | 5_1:-15585347 | None:intergenic |
GCGGCCCTTGTGCGCCGCTA+TGG | 0.299287 | 5_1:-15585279 | None:intergenic |
CACAAGGGCCGCTCTGGAAG+AGG | 0.313592 | 5_1:+15585290 | Msa0719910:CDS |
TATGTGTCGGATTTAGCTTT+TGG | 0.327935 | 5_1:-15582822 | None:intergenic |
GGAACAGAATTTGGTCTTCA+TGG | 0.328708 | 5_1:+15582397 | Msa0719910:CDS |
TCAGTATCAGGAACAGAATT+TGG | 0.328828 | 5_1:+15582388 | Msa0719910:CDS |
ACTGCATAAAGACTGTAAAA+TGG | 0.330409 | 5_1:-15587842 | None:intergenic |
GTTGCACTCCTCATTTCCTT+TGG | 0.334119 | 5_1:+15582692 | Msa0719910:CDS |
TCCAATTGGCACGGCCAGTA+TGG | 0.345562 | 5_1:+15589218 | Msa0719910:CDS |
TCCTTTCTTCCACTCATGTA+TGG | 0.349135 | 5_1:-15587812 | None:intergenic |
TGATGGAGATATTGAAACTT+TGG | 0.357074 | 5_1:+15584817 | Msa0719910:CDS |
ACATCTAGGGCATCAGTATC+AGG | 0.357745 | 5_1:+15582376 | Msa0719910:CDS |
TACTGCTTCTATGGCTCATA+TGG | 0.359546 | 5_1:+15581357 | Msa0719910:CDS |
CGGCCCTTGTGCGCCGCTAT+GGG | 0.362379 | 5_1:-15585278 | None:intergenic |
ACTTCTCCACTTTCTCCAAT+TGG | 0.366435 | 5_1:+15584292 | Msa0719910:CDS |
GTTGCCGGAAAACTCAGATT+TGG | 0.366660 | 5_1:-15585357 | None:intergenic |
CTTGAACTTTCCAGTTGAAA+AGG | 0.367423 | 5_1:-15588880 | None:intergenic |
GGAGTCATATCCAGGACTTC+AGG | 0.367763 | 5_1:-15587791 | None:intergenic |
TGGAGGATATCTACGATCTA+AGG | 0.370301 | 5_1:+15584597 | Msa0719910:CDS |
AAGAATTCTTGCGCTAATAC+TGG | 0.375874 | 5_1:-15589595 | None:intergenic |
CACAAGATTGGAAGTCATCT+TGG | 0.379158 | 5_1:+15584331 | Msa0719910:CDS |
TTGAAATCTTCTTCTTATCC+TGG | 0.382747 | 5_1:-15581198 | None:intergenic |
ACCTGTTCCCACAGTTTGTA+AGG | 0.383832 | 5_1:-15583589 | None:intergenic |
TTATGCAGTGGTCGTCCATT+TGG | 0.385617 | 5_1:+15587856 | Msa0719910:CDS |
TCCATACTGGCCGTGCCAAT+TGG | 0.396800 | 5_1:-15589219 | None:intergenic |
GCGGCGCACAAGGGCCGCTC+TGG | 0.398177 | 5_1:+15585284 | Msa0719910:CDS |
GATCTTACTGTTGAGATTGA+TGG | 0.398304 | 5_1:+15584800 | Msa0719910:CDS |
GCCTTACAAACTGTGGGAAC+AGG | 0.403690 | 5_1:+15583588 | Msa0719910:CDS |
CTTCTCCACTTTCTCCAATT+GGG | 0.405205 | 5_1:+15584293 | Msa0719910:CDS |
AGAAGAGAGAAGAGGTTATG+AGG | 0.406519 | 5_1:+15581320 | Msa0719910:CDS |
TGCAAAAGATATGATGTTAG+AGG | 0.410696 | 5_1:-15584095 | None:intergenic |
AGGAATCATCAACGGCATTC+CGG | 0.411036 | 5_1:-15589010 | None:intergenic |
TTGTGGTGATTCGTTATGTT+TGG | 0.412049 | 5_1:+15581284 | Msa0719910:CDS |
ACAGAAGAAACAACTCTCAT+TGG | 0.412098 | 5_1:+15584565 | Msa0719910:CDS |
GCAAAAGGGTTATCCTATAA+GGG | 0.414040 | 5_1:-15581127 | None:intergenic |
GAGAGAAGAGGTTATGAGGT+TGG | 0.414269 | 5_1:+15581324 | Msa0719910:CDS |
CCGCACAGAACGAGCAGATC+TGG | 0.415871 | 5_1:-15585399 | None:intergenic |
TTTCACTAATATAAGTAGAA+TGG | 0.418206 | 5_1:+15589554 | Msa0719910:three_prime_UTR |
TTGAGATAGAATCAAACATC+TGG | 0.424071 | 5_1:+15589504 | Msa0719910:three_prime_UTR |
CGGGGCGCAACTGGCTTCAC+CGG | 0.424750 | 5_1:-15585195 | None:intergenic |
GCTGCAAAGCTGTTAGATAC+TGG | 0.425233 | 5_1:+15581521 | Msa0719910:CDS |
ACATTCAAGGAGAATGGTTC+AGG | 0.428022 | 5_1:+15587927 | Msa0719910:CDS |
GTTCCTGTTTCAGTTTCTCA+TGG | 0.428479 | 5_1:+15581451 | Msa0719910:CDS |
CTTCAACAAAATGTTCGTAA+TGG | 0.428992 | 5_1:+15583152 | Msa0719910:CDS |
CTATCGGGGAAGAAATACTA+TGG | 0.429666 | 5_1:+15589073 | Msa0719910:CDS |
ATGGCTCATATGGAAGCTTA+TGG | 0.432782 | 5_1:+15581367 | Msa0719910:CDS |
GAAAGAAAGATATTTGTTGC+CGG | 0.432861 | 5_1:-15585372 | None:intergenic |
CAAGAAGAAGTTGACAATAC+TGG | 0.433670 | 5_1:+15587576 | Msa0719910:CDS |
AATGCCGTTGATGATTCCTT+TGG | 0.438331 | 5_1:+15589014 | Msa0719910:CDS |
TTCACTAATATAAGTAGAAT+GGG | 0.439685 | 5_1:+15589555 | Msa0719910:three_prime_UTR |
ATCTTAGATAATATCCCAAT+TGG | 0.440970 | 5_1:-15584307 | None:intergenic |
ATCTGTATGCAAGGTATCAT+AGG | 0.441162 | 5_1:-15589270 | None:intergenic |
CGAGCACAACGCATGGTAGT+AGG | 0.445877 | 5_1:-15581499 | None:intergenic |
GATAAAGTGCTTAAGGTGCC+TGG | 0.447779 | 5_1:+15584748 | Msa0719910:intron |
AAGGTGAAACTATTTCCCTT+TGG | 0.448054 | 5_1:+15583566 | Msa0719910:CDS |
CAGGCACTCTCCAAAACCCC+TGG | 0.448154 | 5_1:+15588836 | Msa0719910:intron |
TTATCCTATAAGGGCAAAAT+GGG | 0.448963 | 5_1:-15581118 | None:intergenic |
GAAACTTTGGAGGAGGCTCT+TGG | 0.449157 | 5_1:+15584830 | Msa0719910:CDS |
TTGCGCCGCAGGACAGTGGC+TGG | 0.452127 | 5_1:+15585169 | Msa0719910:CDS |
TTGGTGAGGCAGGGTCCAAT+TGG | 0.452714 | 5_1:+15589204 | Msa0719910:CDS |
AGCGCTCCCACTCTTGATGC+GGG | 0.453292 | 5_1:-15585214 | None:intergenic |
AGAATTCTTGTGTACAAGTA+AGG | 0.454753 | 5_1:+15589609 | Msa0719910:three_prime_UTR |
AAATGCAGATAAAGTGCTTA+AGG | 0.454777 | 5_1:+15584741 | Msa0719910:intron |
TCAAATATCTTCAACTACTA+AGG | 0.458919 | 5_1:+15583049 | Msa0719910:CDS |
GAGTCATATCCAGGACTTCA+GGG | 0.463677 | 5_1:-15587790 | None:intergenic |
CGATCACTCCGTTGCGCCGC+AGG | 0.465202 | 5_1:+15585158 | Msa0719910:CDS |
TTCTTAACTTCAATATTGAC+AGG | 0.465879 | 5_1:-15582726 | None:intergenic |
TCTTCACATAGCAAACATAA+TGG | 0.467180 | 5_1:-15587904 | None:intergenic |
AATATCCCAATTGGAGAAAG+TGG | 0.468182 | 5_1:-15584298 | None:intergenic |
TCATGATGAGGCATCAAAGT+TGG | 0.471953 | 5_1:+15582845 | Msa0719910:CDS |
TGCTATGTGAAGAACATTCA+AGG | 0.474890 | 5_1:+15587914 | Msa0719910:CDS |
TCCCTCCGTACAGCAGAAGC+AGG | 0.476218 | 5_1:+15588974 | Msa0719910:CDS |
TTTAGATTCCAAAGGAAATG+AGG | 0.478331 | 5_1:-15582700 | None:intergenic |
ATAGAAAATGAACATAAAAC+AGG | 0.478670 | 5_1:-15589743 | None:intergenic |
AGAGTTGTTTCTTCTGTCAA+AGG | 0.480437 | 5_1:-15584559 | None:intergenic |
CTAATTCAGAAGGCAAAAGA+AGG | 0.480521 | 5_1:+15584268 | Msa0719910:intron |
AGAATGGAGATTCAACTATC+GGG | 0.481143 | 5_1:+15589058 | Msa0719910:CDS |
GCCACTGTCCTGCGGCGCAA+CGG | 0.481600 | 5_1:-15585166 | None:intergenic |
TCAAAAGAGGCTGAATTTGA+AGG | 0.484734 | 5_1:-15581415 | None:intergenic |
TGGATCCTGTGTTGGGGACC+AGG | 0.484738 | 5_1:+15581180 | Msa0719910:five_prime_UTR |
CATGATGAGGCATCAAAGTT+GGG | 0.487207 | 5_1:+15582846 | Msa0719910:CDS |
ACCAGGCTTCTCAGCGGGAA+TGG | 0.487378 | 5_1:+15585239 | Msa0719910:CDS |
TACCCATGAGAAACTGAAAC+AGG | 0.487847 | 5_1:-15581454 | None:intergenic |
AGTTCAGTTCCCTGAAGTCC+TGG | 0.488513 | 5_1:+15587781 | Msa0719910:CDS |
GGAAGAAGATGCAGCCGAGT+TGG | 0.490012 | 5_1:-15589249 | None:intergenic |
TCTCCGTGCTTCTTTGTACC+TGG | 0.491522 | 5_1:-15583003 | None:intergenic |
AGTTCCACGAAAAGTTCATA+AGG | 0.491793 | 5_1:-15583530 | None:intergenic |
GCCATTCCCGCTGAGAAGCC+TGG | 0.491944 | 5_1:-15585240 | None:intergenic |
CAGTGGACAATGATGCTGAT+AGG | 0.494139 | 5_1:+15589297 | Msa0719910:CDS |
ACAAGGGCCGCTCTGGAAGA+GGG | 0.498771 | 5_1:+15585291 | Msa0719910:CDS |
ATAATAAGTATAATTGTGGC+AGG | 0.498980 | 5_1:+15584885 | Msa0719910:CDS |
GCAGGACAGTGGCTGGCCGC+CGG | 0.499004 | 5_1:+15585176 | Msa0719910:CDS |
ACGACGAGAATGTTACATCT+AGG | 0.499991 | 5_1:+15582362 | Msa0719910:CDS |
AATCTGTATACCCAGAAGAA+TGG | 0.500875 | 5_1:+15589042 | Msa0719910:CDS |
TGGAGATATTGAAACTTTGG+AGG | 0.501477 | 5_1:+15584820 | Msa0719910:CDS |
CGAATTCAATGATTCAAAAG+AGG | 0.502614 | 5_1:-15581428 | None:intergenic |
GGCGCAACTGGCTTCACCGG+CGG | 0.503356 | 5_1:-15585192 | None:intergenic |
TCATGTATGGAGTCATATCC+AGG | 0.504692 | 5_1:-15587799 | None:intergenic |
AGTTGAATCTCCATTCTTCT+GGG | 0.506322 | 5_1:-15589052 | None:intergenic |
TTCCTGTTTCAGTTTCTCAT+GGG | 0.506577 | 5_1:+15581452 | Msa0719910:CDS |
AAGAATGGAGATTCAACTAT+CGG | 0.508547 | 5_1:+15589057 | Msa0719910:CDS |
CCACAGTTTGTAAGGCCAAA+GGG | 0.509994 | 5_1:-15583581 | None:intergenic |
TTATCTAAGATACACAAGAT+TGG | 0.510095 | 5_1:+15584319 | Msa0719910:CDS |
ATAAAGTGCTTAAGGTGCCT+GGG | 0.510769 | 5_1:+15584749 | Msa0719910:CDS |
CCCTGCTTCTGCTGTACGGA+GGG | 0.511074 | 5_1:-15588975 | None:intergenic |
CCCTTTGGCCTTACAAACTG+TGG | 0.511138 | 5_1:+15583581 | Msa0719910:CDS |
TAATGCAGCACTCCAATGCT+TGG | 0.511611 | 5_1:+15584061 | Msa0719910:intron |
TGAAGAACATTCAAGGAGAA+TGG | 0.514909 | 5_1:+15587921 | Msa0719910:CDS |
TCCATACATGAGTGGAAGAA+AGG | 0.515325 | 5_1:+15587811 | Msa0719910:CDS |
GTCGTTGACCTCCCTGGTGG+TGG | 0.517256 | 5_1:-15582344 | None:intergenic |
AAGCATTCATGATATCCAAA+TGG | 0.518832 | 5_1:-15587871 | None:intergenic |
GGTTCAGGACTGATGACAGC+AGG | 0.519650 | 5_1:+15587942 | Msa0719910:CDS |
CTTATCCTGGTCCCCAACAC+AGG | 0.521921 | 5_1:-15581185 | None:intergenic |
GCTGAGTATACGCCAAGCAT+TGG | 0.523037 | 5_1:-15584073 | None:intergenic |
AAAGGAAATCATGTTAATGT+TGG | 0.523088 | 5_1:+15582510 | Msa0719910:CDS |
CCTTTGGCCTTACAAACTGT+GGG | 0.525061 | 5_1:+15583582 | Msa0719910:CDS |
TGCGCCCATAGCGGCGCACA+AGG | 0.526910 | 5_1:+15585274 | Msa0719910:CDS |
ATTCTCGTCGTTGACCTCCC+TGG | 0.528198 | 5_1:-15582350 | None:intergenic |
TGGAAGAATCGCATTTGTCC+AGG | 0.528424 | 5_1:+15582985 | Msa0719910:CDS |
CGTCTTAGAAACAGCAGGAA+TGG | 0.529122 | 5_1:-15588919 | None:intergenic |
TTGGAAGTCATCTTGGACAT+GGG | 0.529236 | 5_1:+15584338 | Msa0719910:CDS |
CTGTCCCTGCTTCTGCTGTA+CGG | 0.530138 | 5_1:-15588979 | None:intergenic |
CAAGCTTCAGTTTCTAGTGA+CGG | 0.533804 | 5_1:+15581041 | Msa0719910:five_prime_UTR |
AAAGTTCAAGAGGAGAAGCT+TGG | 0.534645 | 5_1:+15588893 | Msa0719910:CDS |
GCTACACCAGGCTTCTCAGC+GGG | 0.535450 | 5_1:+15585234 | Msa0719910:CDS |
AAAGATAATAAGTATAATTG+TGG | 0.535772 | 5_1:+15584881 | Msa0719910:CDS |
GTTGCGCCCCGCATCAAGAG+TGG | 0.540791 | 5_1:+15585207 | Msa0719910:CDS |
CACTGAGAAATCTGTATGCA+AGG | 0.542434 | 5_1:-15589279 | None:intergenic |
TTAGCAGTATTATCACTGAC+AGG | 0.543034 | 5_1:-15582630 | None:intergenic |
AAGACTCTTGACAATTCGAC+AGG | 0.543718 | 5_1:-15588669 | None:intergenic |
TAGCGCTCCCACTCTTGATG+CGG | 0.544271 | 5_1:-15585215 | None:intergenic |
AGAATCAGCATTTGTAGCCA+TGG | 0.544421 | 5_1:-15588952 | None:intergenic |
TCCGTTGCGCCGCAGGACAG+TGG | 0.545397 | 5_1:+15585165 | Msa0719910:CDS |
GTGCGGCTGCTTGTTGTCTG+TGG | 0.546037 | 5_1:+15585416 | Msa0719910:CDS |
ATCAGTATTTGAATTACTCA+AGG | 0.546719 | 5_1:-15582946 | None:intergenic |
CGACGAGAATGTTACATCTA+GGG | 0.549584 | 5_1:+15582363 | Msa0719910:CDS |
AGTTGGAAGAAATTCCATAC+TGG | 0.550381 | 5_1:-15589232 | None:intergenic |
CGTCACTAGAAACTGAAGCT+TGG | 0.550491 | 5_1:-15581040 | None:intergenic |
GTAAGTGTCAAATTAGTCAC+TGG | 0.552713 | 5_1:+15582284 | Msa0719910:CDS |
CACAGTTCCGTCGTTGTCGG+TGG | 0.555570 | 5_1:-15582670 | None:intergenic |
GGTACTTGCATCGTTTCGAA+TGG | 0.557171 | 5_1:-15584124 | None:intergenic |
CAACACAGTTCCGTCGTTGT+CGG | 0.557421 | 5_1:-15582673 | None:intergenic |
TGCTGAAGAGAAGAGAGAAG+AGG | 0.557595 | 5_1:+15581312 | Msa0719910:CDS |
AGCAGGGACAGCACTCTCAC+CGG | 0.559255 | 5_1:+15588991 | Msa0719910:CDS |
CCCACAGTTTGTAAGGCCAA+AGG | 0.560807 | 5_1:-15583582 | None:intergenic |
TAAGACGCGGTCGAATTCCA+TGG | 0.561132 | 5_1:+15588935 | Msa0719910:CDS |
GGCCTTCGATTACCACCACC+AGG | 0.562640 | 5_1:+15582332 | Msa0719910:CDS |
CATACATGCTTCTTTATGCA+AGG | 0.567312 | 5_1:+15588703 | Msa0719910:CDS |
ATTGCTACTTACTGAACCCA+GGG | 0.567598 | 5_1:-15588853 | None:intergenic |
TAACAGACACTTCTAAGTGC+AGG | 0.568492 | 5_1:+15582913 | Msa0719910:CDS |
CAAATTAGTCACTGGAGACA+AGG | 0.573340 | 5_1:+15582292 | Msa0719910:CDS |
TGAGAGGTATGAGAGAATGA+TGG | 0.574311 | 5_1:+15584778 | Msa0719910:CDS |
TTTCCTCGCATAGAGCAAAA+GGG | 0.575633 | 5_1:-15581141 | None:intergenic |
TATGCAATATATTTGTCTCA+AGG | 0.576773 | 5_1:+15584519 | Msa0719910:CDS |
CAAGGGCCGCTCTGGAAGAG+GGG | 0.576987 | 5_1:+15585292 | Msa0719910:CDS |
TTTCAACTGGAAAGTTCAAG+AGG | 0.577233 | 5_1:+15588883 | Msa0719910:CDS |
AGCAACAGAAGCATTAATGC+TGG | 0.579662 | 5_1:-15582553 | None:intergenic |
AGATATTGAAACTTTGGAGG+AGG | 0.580830 | 5_1:+15584823 | Msa0719910:CDS |
AGCAACACTACTGATGAGAC+TGG | 0.581283 | 5_1:+15582783 | Msa0719910:CDS |
CATTGCTACTTACTGAACCC+AGG | 0.583614 | 5_1:-15588854 | None:intergenic |
GTATTTGAATTACTCAAGGA+AGG | 0.584094 | 5_1:-15582942 | None:intergenic |
TATATTTGTCTCAAGGAAGC+CGG | 0.584421 | 5_1:+15584526 | Msa0719910:CDS |
AAGAGTGGGAGCGCTACACC+AGG | 0.585022 | 5_1:+15585222 | Msa0719910:CDS |
TTTCCGTGGATCCTGTGTTG+GGG | 0.586679 | 5_1:+15581174 | Msa0719910:five_prime_UTR |
GACCGCGTCTTAGAAACAGC+AGG | 0.590979 | 5_1:-15588924 | None:intergenic |
TGTCAAAGGACTTGATAGAC+CGG | 0.591889 | 5_1:-15584545 | None:intergenic |
TCCCTGGTGGTGGTAATCGA+AGG | 0.592630 | 5_1:-15582334 | None:intergenic |
CATACCTCTCAGATTTCCCC+AGG | 0.592897 | 5_1:-15584766 | None:intergenic |
GAGGCAGGGTCCAATTGGCA+CGG | 0.593462 | 5_1:+15589209 | Msa0719910:CDS |
ATTGGAAGTCATCTTGGACA+TGG | 0.593636 | 5_1:+15584337 | Msa0719910:CDS |
TCATCTTGGACATGGGAGAG+AGG | 0.596485 | 5_1:+15584345 | Msa0719910:CDS |
TAGGAGGCTCCAGCAAGACT+CGG | 0.596936 | 5_1:+15589316 | Msa0719910:CDS |
TAAGAAGAAGATTTCAACAA+TGG | 0.597011 | 5_1:+15581204 | Msa0719910:exon |
TGTGCAGTTTGCGCCCATAG+CGG | 0.600236 | 5_1:+15585265 | Msa0719910:CDS |
GAAGAAGATTTCAACAATGG+TGG | 0.600589 | 5_1:+15581207 | Msa0719910:exon |
AAGGTCACAAGGACGAATGT+TGG | 0.601222 | 5_1:+15582311 | Msa0719910:CDS |
GTATGGAATTTCTTCCAACT+CGG | 0.603183 | 5_1:+15589235 | Msa0719910:CDS |
AGGCACTCTCCAAAACCCCT+GGG | 0.603241 | 5_1:+15588837 | Msa0719910:intron |
GCGGCGCAACGGAGTGATCG+TGG | 0.603946 | 5_1:-15585155 | None:intergenic |
TACTACAAGTACAAAGGACT+CGG | 0.604089 | 5_1:+15589151 | Msa0719910:CDS |
TAATTCAGAAGGCAAAAGAA+GGG | 0.604303 | 5_1:+15584269 | Msa0719910:intron |
GGTCCCCAACACAGGATCCA+CGG | 0.606466 | 5_1:-15581177 | None:intergenic |
GCGCCCATAGCGGCGCACAA+GGG | 0.608020 | 5_1:+15585275 | Msa0719910:CDS |
TTGCGCCCCGCATCAAGAGT+GGG | 0.609414 | 5_1:+15585208 | Msa0719910:CDS |
TCCCTGCTTCTGCTGTACGG+AGG | 0.611151 | 5_1:-15588976 | None:intergenic |
AATATCTTCAACTACTAAGG+AGG | 0.612434 | 5_1:+15583052 | Msa0719910:CDS |
TTTGCAGCGAGCACAACGCA+TGG | 0.613380 | 5_1:-15581506 | None:intergenic |
GCGCTCCCACTCTTGATGCG+GGG | 0.623822 | 5_1:-15585213 | None:intergenic |
TGGACAATGATGCTGATAGG+AGG | 0.625036 | 5_1:+15589300 | Msa0719910:CDS |
GGCGGCCAGCCACTGTCCTG+CGG | 0.629070 | 5_1:-15585174 | None:intergenic |
GGAACTTTATTGTTATGACA+AGG | 0.634679 | 5_1:+15583547 | Msa0719910:CDS |
GAATGGAGATTCAACTATCG+GGG | 0.641373 | 5_1:+15589059 | Msa0719910:CDS |
ATCCGACACATATCATGATG+AGG | 0.641909 | 5_1:+15582833 | Msa0719910:CDS |
GTATACAGATTCATTGCCAA+AGG | 0.642712 | 5_1:-15589030 | None:intergenic |
CCCTCCGTACAGCAGAAGCA+GGG | 0.643033 | 5_1:+15588975 | Msa0719910:CDS |
CGCTACACCAGGCTTCTCAG+CGG | 0.643714 | 5_1:+15585233 | Msa0719910:CDS |
TTCCTGCTGTTTCTAAGACG+CGG | 0.645116 | 5_1:+15588922 | Msa0719910:CDS |
TCACTGGAGACAAGGTCACA+AGG | 0.645616 | 5_1:+15582300 | Msa0719910:CDS |
AATGGGAAAGATAGTTGCGT+CGG | 0.645663 | 5_1:-15581101 | None:intergenic |
GTAGCTTCCACCGACAACGA+CGG | 0.646206 | 5_1:+15582663 | Msa0719910:CDS |
CTCGTCGTTGACCTCCCTGG+TGG | 0.656639 | 5_1:-15582347 | None:intergenic |
ATTGCCAAAGGAATCATCAA+CGG | 0.660841 | 5_1:-15589018 | None:intergenic |
ATGAGTCATGAGTCTCGTGA+CGG | 0.661809 | 5_1:-15582599 | None:intergenic |
GTTCAGGACTGATGACAGCA+GGG | 0.663226 | 5_1:+15587943 | Msa0719910:CDS |
GATGAGGCATCAAAGTTGGG+TGG | 0.663974 | 5_1:+15582849 | Msa0719910:CDS |
TAAAGTGCTTAAGGTGCCTG+GGG | 0.666066 | 5_1:+15584750 | Msa0719910:CDS |
TGCCTCATCATGATATGTGT+CGG | 0.666217 | 5_1:-15582835 | None:intergenic |
TGTCCAGGTACAAAGAAGCA+CGG | 0.666419 | 5_1:+15583000 | Msa0719910:CDS |
GATATGACTCCATACATGAG+TGG | 0.668813 | 5_1:+15587803 | Msa0719910:CDS |
TTGCAGTACTACAAGTACAA+AGG | 0.669235 | 5_1:+15589145 | Msa0719910:CDS |
TCGGGGAAGAAATACTATGG+TGG | 0.679997 | 5_1:+15589076 | Msa0719910:CDS |
GAAGAAGTTGACAATACTGG+AGG | 0.702243 | 5_1:+15587579 | Msa0719910:CDS |
TTTCATCCCCTCTTCCAGAG+CGG | 0.712573 | 5_1:-15585298 | None:intergenic |
TTCGATTACCACCACCAGGG+AGG | 0.721514 | 5_1:+15582336 | Msa0719910:CDS |
TGATGTTCTAGCTGACGACG+TGG | 0.722306 | 5_1:+15582965 | Msa0719910:CDS |
CCAGATCTGCTCGTTCTGTG+CGG | 0.722895 | 5_1:+15585399 | Msa0719910:CDS |
GCCTTCGATTACCACCACCA+GGG | 0.727082 | 5_1:+15582333 | Msa0719910:CDS |
TTGCTACTTACTGAACCCAG+GGG | 0.730240 | 5_1:-15588852 | None:intergenic |
GGTGCCTGGGGAAATCTGAG+AGG | 0.732683 | 5_1:+15584762 | Msa0719910:CDS |
CTTGCATACAGATTTCTCAG+TGG | 0.734461 | 5_1:+15589280 | Msa0719910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATTACAGATAAAAATT+GGG | + | chr5_1:15585113-15585132 | Msa0719910:intron | 10.0% |
!! | ATTATAATTAGTTCAAATAA+CGG | + | chr5_1:15585951-15585970 | Msa0719910:intron | 10.0% |
!! | AATAAATAAACTTAGAATAA+TGG | - | chr5_1:15588511-15588530 | None:intergenic | 10.0% |
!!! | TATATGGTATTAATTTTGTT+AGG | + | chr5_1:15582472-15582491 | Msa0719910:intron | 15.0% |
!! | CATTAGATAAATTATGTATT+TGG | + | chr5_1:15583346-15583365 | Msa0719910:intron | 15.0% |
!!! | GATTTAAAATTTTGTTGTTT+TGG | + | chr5_1:15583495-15583514 | Msa0719910:intron | 15.0% |
!! | CATAGAAAGAAAAAAAATAA+AGG | - | chr5_1:15583743-15583762 | None:intergenic | 15.0% |
!! | AAAGATAATAAGTATAATTG+TGG | + | chr5_1:15584881-15584900 | Msa0719910:CDS | 15.0% |
!! | GTAACATGATAAAAAATAAT+AGG | - | chr5_1:15584948-15584967 | None:intergenic | 15.0% |
!! | AATTTAATTACCATATACTA+TGG | - | chr5_1:15585012-15585031 | None:intergenic | 15.0% |
!! | CATTTATTACAGATAAAAAT+TGG | + | chr5_1:15585112-15585131 | Msa0719910:intron | 15.0% |
!!! | TTTTTAAGTAATTTTTTCGA+GGG | - | chr5_1:15585708-15585727 | None:intergenic | 15.0% |
!! | TTTAAAAATTAAGAGAAGAA+GGG | + | chr5_1:15586559-15586578 | Msa0719910:intron | 15.0% |
!!! | TTAAATCTTAAAGCTTTATT+GGG | + | chr5_1:15586601-15586620 | Msa0719910:intron | 15.0% |
!!! | TTTAAATAGTGATCTTTTAA+TGG | + | chr5_1:15586753-15586772 | Msa0719910:intron | 15.0% |
!!! | ATCTTTTGCTTTATATAAAT+AGG | - | chr5_1:15587193-15587212 | None:intergenic | 15.0% |
!!! | GTTTATTTGTTATTGGTTTT+GGG | + | chr5_1:15581259-15581278 | Msa0719910:CDS | 20.0% |
!!! | TTTGTTTGAAATTGAGTAAT+GGG | + | chr5_1:15581613-15581632 | Msa0719910:intron | 20.0% |
!!! | AGAAATTTTGAAGCTTTTTA+AGG | + | chr5_1:15581661-15581680 | Msa0719910:intron | 20.0% |
!!! | GAAATTTTGAAGCTTTTTAA+GGG | + | chr5_1:15581662-15581681 | Msa0719910:intron | 20.0% |
!!! | AAATTTTGAAGCTTTTTAAG+GGG | + | chr5_1:15581663-15581682 | Msa0719910:intron | 20.0% |
!!! | TGTAACATTTTATGATACTT+CGG | + | chr5_1:15581799-15581818 | Msa0719910:intron | 20.0% |
!! | AATTCAAGAGATAAATTTCA+AGG | - | chr5_1:15582092-15582111 | None:intergenic | 20.0% |
!! | AAAAAAACTAGAGATATTCA+GGG | - | chr5_1:15582173-15582192 | None:intergenic | 20.0% |
!! | AAAAAAAACTAGAGATATTC+AGG | - | chr5_1:15582174-15582193 | None:intergenic | 20.0% |
!!! | GTAAATTGTTTCTTGTAAAT+AGG | + | chr5_1:15583415-15583434 | Msa0719910:intron | 20.0% |
!! | CTAATCTTTATAATAAGTGT+AGG | - | chr5_1:15583789-15583808 | None:intergenic | 20.0% |
!!! | ATCATGAAGTTGTTATTAAT+AGG | - | chr5_1:15584148-15584167 | None:intergenic | 20.0% |
!!! | ATTTAACTTGTTCAACTATT+AGG | + | chr5_1:15584166-15584185 | Msa0719910:intron | 20.0% |
!!! | AAACAAAATCTTTTATGCAT+TGG | + | chr5_1:15584454-15584473 | Msa0719910:intron | 20.0% |
!!! | GAATCTAACAATCTATTTTA+TGG | + | chr5_1:15584627-15584646 | Msa0719910:intron | 20.0% |
!!! | GTTTTCAAATTTTATTGAGT+AGG | + | chr5_1:15584665-15584684 | Msa0719910:intron | 20.0% |
!!! | AAATTTTATTGAGTAGGAAA+GGG | + | chr5_1:15584671-15584690 | Msa0719910:intron | 20.0% |
!! | TTATCTTTATCCAAAATTTC+AGG | - | chr5_1:15584869-15584888 | None:intergenic | 20.0% |
!!! | ATTTATTTCCTTTTCTCAAA+CGG | + | chr5_1:15585029-15585048 | Msa0719910:intron | 20.0% |
!!! | CTTTTTAAGTAATTTTTTCG+AGG | - | chr5_1:15585709-15585728 | None:intergenic | 20.0% |
!! | CTCGAAAAAATTACTTAAAA+AGG | + | chr5_1:15585707-15585726 | Msa0719910:intron | 20.0% |
!!! | CTTTAAAAATTAAGAGAAGA+AGG | + | chr5_1:15586558-15586577 | Msa0719910:intron | 20.0% |
!!! | GTTAAATCTTAAAGCTTTAT+TGG | + | chr5_1:15586600-15586619 | Msa0719910:intron | 20.0% |
!! | ACTATTTAAATCAATTTGAC+AGG | - | chr5_1:15586743-15586762 | None:intergenic | 20.0% |
!!! | AACAATATTTTGTGGAATTT+GGG | + | chr5_1:15586831-15586850 | Msa0719910:intron | 20.0% |
!! | TACAATTTACAAATGTTTAG+AGG | + | chr5_1:15587135-15587154 | Msa0719910:intron | 20.0% |
!! | ACAATTTACAAATGTTTAGA+GGG | + | chr5_1:15587136-15587155 | Msa0719910:intron | 20.0% |
!! | TAAATCACAAAAACTAACTA+AGG | + | chr5_1:15587213-15587232 | Msa0719910:intron | 20.0% |
!! | ATAAAACTCACAATAAAGTA+AGG | + | chr5_1:15587325-15587344 | Msa0719910:intron | 20.0% |
!! | TAAAACTCACAATAAAGTAA+GGG | + | chr5_1:15587326-15587345 | Msa0719910:intron | 20.0% |
!!! | TATGTTTTGTGTTTATGTTT+AGG | + | chr5_1:15587382-15587401 | Msa0719910:intron | 20.0% |
!! | CTATTTATAAGAGACAAATT+AGG | - | chr5_1:15587418-15587437 | None:intergenic | 20.0% |
!!! | CTAATTTGTCTCTTATAAAT+AGG | + | chr5_1:15587416-15587435 | Msa0719910:intron | 20.0% |
!! | AAAGTTGAACATAAAAATCT+AGG | - | chr5_1:15587478-15587497 | None:intergenic | 20.0% |
!!! | TTTTATGTTCAACTTTCATA+TGG | + | chr5_1:15587482-15587501 | Msa0719910:intron | 20.0% |
!! | TTTATGTTCAACTTTCATAT+GGG | + | chr5_1:15587483-15587502 | Msa0719910:intron | 20.0% |
!! | AATACGATTGTAAGAATATT+TGG | - | chr5_1:15587607-15587626 | None:intergenic | 20.0% |
!!! | TGTAATTTTGCTTTTACATT+AGG | + | chr5_1:15587694-15587713 | Msa0719910:intron | 20.0% |
!!! | ACTTGTATAATCTCATTTTA+GGG | - | chr5_1:15588027-15588046 | None:intergenic | 20.0% |
!!! | ATTAACTAAGTTTAGGTTAT+AGG | - | chr5_1:15588112-15588131 | None:intergenic | 20.0% |
!! | ATTCTCAATTAACTAAGTTT+AGG | - | chr5_1:15588119-15588138 | None:intergenic | 20.0% |
!! | TAGTTAATTGAGAATCAATT+TGG | + | chr5_1:15588124-15588143 | Msa0719910:intron | 20.0% |
!! | AGTTAATTGAGAATCAATTT+GGG | + | chr5_1:15588125-15588144 | Msa0719910:intron | 20.0% |
!! | TTTATAAGTAGAATTGTAGA+AGG | - | chr5_1:15588299-15588318 | None:intergenic | 20.0% |
!! | TATATCTAGTATATGTTACA+AGG | + | chr5_1:15588343-15588362 | Msa0719910:intron | 20.0% |
!! | AACAAAAACAAAAATCATAG+TGG | + | chr5_1:15589362-15589381 | Msa0719910:CDS | 20.0% |
!! | TTTCACTAATATAAGTAGAA+TGG | + | chr5_1:15589554-15589573 | Msa0719910:three_prime_UTR | 20.0% |
!! | TTCACTAATATAAGTAGAAT+GGG | + | chr5_1:15589555-15589574 | Msa0719910:three_prime_UTR | 20.0% |
!! | ATAGAAAATGAACATAAAAC+AGG | - | chr5_1:15589746-15589765 | None:intergenic | 20.0% |
! | TAAGAAGAAGATTTCAACAA+TGG | + | chr5_1:15581204-15581223 | Msa0719910:exon | 25.0% |
!!! | AGGTTTGGTTTATTTGTTAT+TGG | + | chr5_1:15581252-15581271 | Msa0719910:CDS | 25.0% |
!!! | GGTTTATTTGTTATTGGTTT+TGG | + | chr5_1:15581258-15581277 | Msa0719910:CDS | 25.0% |
!! | CTCTTTTGAATCATTGAATT+CGG | + | chr5_1:15581429-15581448 | Msa0719910:CDS | 25.0% |
!! | GTTTGTTTGAAATTGAGTAA+TGG | + | chr5_1:15581612-15581631 | Msa0719910:intron | 25.0% |
! | AAGAGTCATATCATCATATA+TGG | + | chr5_1:15582456-15582475 | Msa0719910:intron | 25.0% |
! | AAAGGAAATCATGTTAATGT+TGG | + | chr5_1:15582510-15582529 | Msa0719910:CDS | 25.0% |
! | TTCTTAACTTCAATATTGAC+AGG | - | chr5_1:15582729-15582748 | None:intergenic | 25.0% |
! | ATCAGTATTTGAATTACTCA+AGG | - | chr5_1:15582949-15582968 | None:intergenic | 25.0% |
! | TCAAATATCTTCAACTACTA+AGG | + | chr5_1:15583049-15583068 | Msa0719910:CDS | 25.0% |
! | AAAATGAGGTGTGAATATAT+TGG | + | chr5_1:15583252-15583271 | Msa0719910:intron | 25.0% |
!! | TAACATCATATCTTTTGCAA+GGG | + | chr5_1:15584099-15584118 | Msa0719910:CDS | 25.0% |
! | CTATTAGGACCTTTAATTAA+TGG | + | chr5_1:15584181-15584200 | Msa0719910:intron | 25.0% |
! | GTGAAGATTCCATTAATTAA+AGG | - | chr5_1:15584193-15584212 | None:intergenic | 25.0% |
! | GTTTGAATATCTAATTCAGA+AGG | + | chr5_1:15584258-15584277 | Msa0719910:intron | 25.0% |
! | ATCTTAGATAATATCCCAAT+TGG | - | chr5_1:15584310-15584329 | None:intergenic | 25.0% |
!! | TTATCTAAGATACACAAGAT+TGG | + | chr5_1:15584319-15584338 | Msa0719910:CDS | 25.0% |
! | TCATTCTTTATCAATGCTAT+TGG | + | chr5_1:15584412-15584431 | Msa0719910:intron | 25.0% |
! | TATGCAATATATTTGTCTCA+AGG | + | chr5_1:15584519-15584538 | Msa0719910:CDS | 25.0% |
!! | CAAATTTTATTGAGTAGGAA+AGG | + | chr5_1:15584670-15584689 | Msa0719910:intron | 25.0% |
! | GAAACTTCAACATTTATGAA+AGG | - | chr5_1:15584710-15584729 | None:intergenic | 25.0% |
! | ATAATAAGTATAATTGTGGC+AGG | + | chr5_1:15584885-15584904 | Msa0719910:CDS | 25.0% |
!!! | GTTTTATTAGCCATAGTATA+TGG | + | chr5_1:15584999-15585018 | Msa0719910:intron | 25.0% |
! | ACTATTATTCAAGAGAAAGT+AGG | + | chr5_1:15585079-15585098 | Msa0719910:intron | 25.0% |
!! | AAACAATTTCTCACCTTTTA+TGG | + | chr5_1:15585334-15585353 | Msa0719910:CDS | 25.0% |
!!! | CTGTTTTTAAAAAATCATCG+TGG | + | chr5_1:15585673-15585692 | Msa0719910:intron | 25.0% |
! | AGATGTAAATATTCTGTCTT+TGG | + | chr5_1:15586017-15586036 | Msa0719910:intron | 25.0% |
! | TTGTACTAAATTGTATATCG+CGG | + | chr5_1:15586140-15586159 | Msa0719910:intron | 25.0% |
! | CACTTTAACTATCAAGTATT+TGG | - | chr5_1:15586384-15586403 | None:intergenic | 25.0% |
!! | CAAATACTTGATAGTTAAAG+TGG | + | chr5_1:15586382-15586401 | Msa0719910:intron | 25.0% |
!! | GAAGTTTGAACAATATTTTG+TGG | + | chr5_1:15586823-15586842 | Msa0719910:intron | 25.0% |
!! | GAACAATATTTTGTGGAATT+TGG | + | chr5_1:15586830-15586849 | Msa0719910:intron | 25.0% |
!! | ACAATATTTTGTGGAATTTG+GGG | + | chr5_1:15586832-15586851 | Msa0719910:intron | 25.0% |
! | TCTAGTACAATACTAAAAGA+CGG | - | chr5_1:15587009-15587028 | None:intergenic | 25.0% |
! | ATTCTGATTTATGAACATTG+AGG | + | chr5_1:15587104-15587123 | Msa0719910:intron | 25.0% |
! | CAATTTACAAATGTTTAGAG+GGG | + | chr5_1:15587137-15587156 | Msa0719910:intron | 25.0% |
! | TTTATATAAATAGGACCACA+GGG | - | chr5_1:15587184-15587203 | None:intergenic | 25.0% |
! | AAAACTCACAATAAAGTAAG+GGG | + | chr5_1:15587327-15587346 | Msa0719910:intron | 25.0% |
! | AATCGTATTAAAACGATTTC+AGG | + | chr5_1:15587618-15587637 | Msa0719910:CDS | 25.0% |
!!! | TATCTTTTTTTTGTGTCTGA+AGG | + | chr5_1:15587982-15588001 | Msa0719910:intron | 25.0% |
!! | TTGTATAATCTCATTTTAGG+GGG | - | chr5_1:15588025-15588044 | None:intergenic | 25.0% |
!! | CTTGTATAATCTCATTTTAG+GGG | - | chr5_1:15588026-15588045 | None:intergenic | 25.0% |
!! | CACTTGTATAATCTCATTTT+AGG | - | chr5_1:15588028-15588047 | None:intergenic | 25.0% |
!! | TGTTCAACTCATTCAATTTT+TGG | + | chr5_1:15588055-15588074 | Msa0719910:intron | 25.0% |
! | GTTAATTGAGAATCAATTTG+GGG | + | chr5_1:15588126-15588145 | Msa0719910:intron | 25.0% |
! | AATTCAGAAGTGATTTGAAT+AGG | + | chr5_1:15588180-15588199 | Msa0719910:intron | 25.0% |
! | AAGTGATTTGAATAGGAAAT+TGG | + | chr5_1:15588187-15588206 | Msa0719910:intron | 25.0% |
! | CTACAATTCTACTTATAAAC+AGG | + | chr5_1:15588300-15588319 | Msa0719910:intron | 25.0% |
! | TATATGTTACAAGGTTGTAA+GGG | + | chr5_1:15588352-15588371 | Msa0719910:intron | 25.0% |
!!! | AACTACAAACCACTTTTAAT+GGG | - | chr5_1:15588384-15588403 | None:intergenic | 25.0% |
!!! | AAACTACAAACCACTTTTAA+TGG | - | chr5_1:15588385-15588404 | None:intergenic | 25.0% |
!!! | TTTGTAGTTTTGTACTTTCT+AGG | + | chr5_1:15588395-15588414 | Msa0719910:intron | 25.0% |
!!! | TTTTAAGACTCCTTTTGAAA+AGG | + | chr5_1:15588549-15588568 | Msa0719910:intron | 25.0% |
!! | GATTTTCTGTATGTAAATTG+AGG | + | chr5_1:15588617-15588636 | Msa0719910:intron | 25.0% |
!! | GACTTTTCAGATTACATTTT+TGG | + | chr5_1:15589185-15589204 | Msa0719910:CDS | 25.0% |
!!! | TAGCAGTGACAAATTTTTTA+AGG | - | chr5_1:15589403-15589422 | None:intergenic | 25.0% |
!!! | TCAAACATCTGGAATATTTT+TGG | + | chr5_1:15589515-15589534 | Msa0719910:three_prime_UTR | 25.0% |
!! | CAATCACCTCTAATAATTTT+TGG | + | chr5_1:15589691-15589710 | Msa0719910:three_prime_UTR | 25.0% |
! | ACTGTACCAAAAATTATTAG+AGG | - | chr5_1:15589700-15589719 | None:intergenic | 25.0% |
TTATCCTATAAGGGCAAAAT+GGG | - | chr5_1:15581121-15581140 | None:intergenic | 30.0% | |
TTGAAATCTTCTTCTTATCC+TGG | - | chr5_1:15581201-15581220 | None:intergenic | 30.0% | |
!!! | TTTGAGATTTTAGGGTTTCA+AGG | + | chr5_1:15581232-15581251 | Msa0719910:CDS | 30.0% |
CGAATTCAATGATTCAAAAG+AGG | - | chr5_1:15581431-15581450 | None:intergenic | 30.0% | |
! | TGTTTTTCATGTTATGCATG+TGG | + | chr5_1:15581590-15581609 | Msa0719910:intron | 30.0% |
TTTCTATGTTCCTAACCTAA+TGG | - | chr5_1:15581646-15581665 | None:intergenic | 30.0% | |
!! | AGCTTTTTAAGGGGATATAA+TGG | + | chr5_1:15581672-15581691 | Msa0719910:intron | 30.0% |
! | AGGGGATATAATGGAAAATT+AGG | + | chr5_1:15581681-15581700 | Msa0719910:intron | 30.0% |
! | GGGGATATAATGGAAAATTA+GGG | + | chr5_1:15581682-15581701 | Msa0719910:intron | 30.0% |
! | AATGGAAAATTAGGGTATTC+CGG | + | chr5_1:15581690-15581709 | Msa0719910:intron | 30.0% |
AACAAACACACAAAACACTA+CGG | - | chr5_1:15581844-15581863 | None:intergenic | 30.0% | |
CACTTTGTGAAAATATCTCT+CGG | - | chr5_1:15581894-15581913 | None:intergenic | 30.0% | |
TGATGATATGACTCTTGAAA+CGG | - | chr5_1:15582452-15582471 | None:intergenic | 30.0% | |
TTTAGATTCCAAAGGAAATG+AGG | - | chr5_1:15582703-15582722 | None:intergenic | 30.0% | |
!! | ACAGGATTTTTAGATTCCAA+AGG | - | chr5_1:15582711-15582730 | None:intergenic | 30.0% |
GTATTTGAATTACTCAAGGA+AGG | - | chr5_1:15582945-15582964 | None:intergenic | 30.0% | |
AATATCTTCAACTACTAAGG+AGG | + | chr5_1:15583052-15583071 | Msa0719910:CDS | 30.0% | |
! | ATTGTCAGTTTTTGTAGACT+TGG | - | chr5_1:15583093-15583112 | None:intergenic | 30.0% |
! | CGAACATTTTGTTGAAGATT+TGG | - | chr5_1:15583149-15583168 | None:intergenic | 30.0% |
CTTCAACAAAATGTTCGTAA+TGG | + | chr5_1:15583152-15583171 | Msa0719910:CDS | 30.0% | |
! | ATTTTCAACAGATGCTAGAT+TGG | - | chr5_1:15583237-15583256 | None:intergenic | 30.0% |
! | CTGTTTCTTGTAAAAAAGAC+CGG | - | chr5_1:15583311-15583330 | None:intergenic | 30.0% |
!! | ACAAGAAACAGTTGACTTTT+TGG | + | chr5_1:15583320-15583339 | Msa0719910:intron | 30.0% |
! | TTGTTTCTTGTAAATAGGAC+CGG | + | chr5_1:15583420-15583439 | Msa0719910:intron | 30.0% |
!!! | AATTTTGTTGTTTTGGCAGT+TGG | + | chr5_1:15583502-15583521 | Msa0719910:intron | 30.0% |
!!! | ATTTTGTTGTTTTGGCAGTT+GGG | + | chr5_1:15583503-15583522 | Msa0719910:intron | 30.0% |
GGAACTTTATTGTTATGACA+AGG | + | chr5_1:15583547-15583566 | Msa0719910:CDS | 30.0% | |
TAAGAAGGATGAGAGATTAA+AGG | + | chr5_1:15583672-15583691 | Msa0719910:intron | 30.0% | |
AAGAAGGATGAGAGATTAAA+GGG | + | chr5_1:15583673-15583692 | Msa0719910:intron | 30.0% | |
! | TTAGGAAACATTCTAGTTGT+TGG | + | chr5_1:15583879-15583898 | Msa0719910:intron | 30.0% |
TGCAAAAGATATGATGTTAG+AGG | - | chr5_1:15584098-15584117 | None:intergenic | 30.0% | |
! | CTAACATCATATCTTTTGCA+AGG | + | chr5_1:15584098-15584117 | Msa0719910:CDS | 30.0% |
ATCTTCACAATGTTCTCAAT+AGG | + | chr5_1:15584205-15584224 | Msa0719910:intron | 30.0% | |
TAATTCAGAAGGCAAAAGAA+GGG | + | chr5_1:15584269-15584288 | Msa0719910:intron | 30.0% | |
! | AAATGCAGATAAAGTGCTTA+AGG | + | chr5_1:15584741-15584760 | Msa0719910:intron | 30.0% |
TGATGGAGATATTGAAACTT+TGG | + | chr5_1:15584817-15584836 | Msa0719910:CDS | 30.0% | |
AGAAATAAATGTGACATGGA+AGG | - | chr5_1:15584923-15584942 | None:intergenic | 30.0% | |
GGAAAGAAATAAATGTGACA+TGG | - | chr5_1:15584927-15584946 | None:intergenic | 30.0% | |
! | TTTTATCATGTTACTGTGCT+TGG | + | chr5_1:15584954-15584973 | Msa0719910:intron | 30.0% |
ACAGATAAAAATTGGGATCT+AGG | + | chr5_1:15585120-15585139 | Msa0719910:intron | 30.0% | |
! | GAAAGAAAGATATTTGTTGC+CGG | - | chr5_1:15585375-15585394 | None:intergenic | 30.0% |
!! | ATGATTTTAAGCTAGGTTGA+GGG | + | chr5_1:15585525-15585544 | Msa0719910:intron | 30.0% |
!!! | TTAAGTAATTTTTTCGAGGG+CGG | - | chr5_1:15585705-15585724 | None:intergenic | 30.0% |
TGTATATACACACACTTAGT+GGG | - | chr5_1:15585921-15585940 | None:intergenic | 30.0% | |
ATGTATATACACACACTTAG+TGG | - | chr5_1:15585922-15585941 | None:intergenic | 30.0% | |
TGTATATCGCGGAATAAAAT+CGG | + | chr5_1:15586151-15586170 | Msa0719910:intron | 30.0% | |
ATGGTGATAAACTACTCAAA+GGG | + | chr5_1:15586527-15586546 | Msa0719910:intron | 30.0% | |
TTAAGATTTAACCTTCCAAG+AGG | - | chr5_1:15586592-15586611 | None:intergenic | 30.0% | |
!! | AATCTTAAAGCTTTATTGGG+AGG | + | chr5_1:15586604-15586623 | Msa0719910:intron | 30.0% |
!! | ATCTTAAAGCTTTATTGGGA+GGG | + | chr5_1:15586605-15586624 | Msa0719910:intron | 30.0% |
!!! | ATGTTGCGGTCAATTTTTTA+AGG | - | chr5_1:15586647-15586666 | None:intergenic | 30.0% |
CAAACTTCTAATAGATGTTG+CGG | - | chr5_1:15586661-15586680 | None:intergenic | 30.0% | |
! | GTGATCTTTTAATGGTTTTC+CGG | + | chr5_1:15586761-15586780 | Msa0719910:intron | 30.0% |
!! | TTTATGACCTTAAGTTGACT+TGG | + | chr5_1:15587078-15587097 | Msa0719910:intron | 30.0% |
GAATATACCAAGTCAACTTA+AGG | - | chr5_1:15587088-15587107 | None:intergenic | 30.0% | |
CTTTATATAAATAGGACCAC+AGG | - | chr5_1:15587185-15587204 | None:intergenic | 30.0% | |
TCTTATTAAATGAGCGTTAG+CGG | - | chr5_1:15587277-15587296 | None:intergenic | 30.0% | |
AAACTCACAATAAAGTAAGG+GGG | + | chr5_1:15587328-15587347 | Msa0719910:intron | 30.0% | |
TCTCTTATAAATAGGACTAG+AGG | + | chr5_1:15587424-15587443 | Msa0719910:intron | 30.0% | |
CTCTTATAAATAGGACTAGA+GGG | + | chr5_1:15587425-15587444 | Msa0719910:intron | 30.0% | |
!!! | TGTTGTTTATTTTGACAGTC+TGG | + | chr5_1:15587734-15587753 | Msa0719910:intron | 30.0% |
ACTGCATAAAGACTGTAAAA+TGG | - | chr5_1:15587845-15587864 | None:intergenic | 30.0% | |
! | ATTTTACAGTCTTTATGCAG+TGG | + | chr5_1:15587844-15587863 | Msa0719910:CDS | 30.0% |
AAGCATTCATGATATCCAAA+TGG | - | chr5_1:15587874-15587893 | None:intergenic | 30.0% | |
! | ATCATGAATGCTTCATTTTC+AGG | + | chr5_1:15587881-15587900 | Msa0719910:CDS | 30.0% |
TCTTCACATAGCAAACATAA+TGG | - | chr5_1:15587907-15587926 | None:intergenic | 30.0% | |
!! | TGTATAATCTCATTTTAGGG+GGG | - | chr5_1:15588024-15588043 | None:intergenic | 30.0% |
! | TAAGTTTAGGTTATAGGTTG+AGG | - | chr5_1:15588106-15588125 | None:intergenic | 30.0% |
CTTTGGACAAACTTAAAATG+AGG | - | chr5_1:15588221-15588240 | None:intergenic | 30.0% | |
!!! | CATTTTAAGTTTGTCCAAAG+AGG | + | chr5_1:15588221-15588240 | Msa0719910:intron | 30.0% |
GTATATGTTACAAGGTTGTA+AGG | + | chr5_1:15588351-15588370 | Msa0719910:intron | 30.0% | |
TTTGAAAAACAAAAGGCAGT+AGG | - | chr5_1:15588467-15588486 | None:intergenic | 30.0% | |
!! | AGAAGGCTTTGAAAAACAAA+AGG | - | chr5_1:15588474-15588493 | None:intergenic | 30.0% |
TGGATTGCAATTTCTTTAGA+AGG | - | chr5_1:15588491-15588510 | None:intergenic | 30.0% | |
ATGCTCATTTGAAAATTTCC+AGG | + | chr5_1:15588817-15588836 | Msa0719910:intron | 30.0% | |
AAGAATGGAGATTCAACTAT+CGG | + | chr5_1:15589057-15589076 | Msa0719910:CDS | 30.0% | |
!!! | TTCAGATTACATTTTTGGTG+AGG | + | chr5_1:15589190-15589209 | Msa0719910:CDS | 30.0% |
ACAAAAATCATAGTGGTAGA+TGG | + | chr5_1:15589369-15589388 | Msa0719910:CDS | 30.0% | |
CAAAAATCATAGTGGTAGAT+GGG | + | chr5_1:15589370-15589389 | Msa0719910:CDS | 30.0% | |
AAAAATCATAGTGGTAGATG+GGG | + | chr5_1:15589371-15589390 | Msa0719910:CDS | 30.0% | |
TTGAGATAGAATCAAACATC+TGG | + | chr5_1:15589504-15589523 | Msa0719910:three_prime_UTR | 30.0% | |
AGAATTCTTGTGTACAAGTA+AGG | + | chr5_1:15589609-15589628 | Msa0719910:three_prime_UTR | 30.0% | |
GTTATCCTATAAGGGCAAAA+TGG | - | chr5_1:15581122-15581141 | None:intergenic | 35.0% | |
GCAAAAGGGTTATCCTATAA+GGG | - | chr5_1:15581130-15581149 | None:intergenic | 35.0% | |
AGCAAAAGGGTTATCCTATA+AGG | - | chr5_1:15581131-15581150 | None:intergenic | 35.0% | |
! | GAAAAGTTGTGATTTTTCCG+TGG | + | chr5_1:15581160-15581179 | Msa0719910:five_prime_UTR | 35.0% |
GAAGAAGATTTCAACAATGG+TGG | + | chr5_1:15581207-15581226 | Msa0719910:exon | 35.0% | |
!! | ATGGTGGTGTTTGAGATTTT+AGG | + | chr5_1:15581223-15581242 | Msa0719910:CDS | 35.0% |
!! | TGGTGGTGTTTGAGATTTTA+GGG | + | chr5_1:15581224-15581243 | Msa0719910:CDS | 35.0% |
!!! | GATTTTAGGGTTTCAAGGTT+TGG | + | chr5_1:15581237-15581256 | Msa0719910:CDS | 35.0% |
!!! | GTTATTGGTTTTGGGTTTTG+TGG | + | chr5_1:15581267-15581286 | Msa0719910:CDS | 35.0% |
TTGTGGTGATTCGTTATGTT+TGG | + | chr5_1:15581284-15581303 | Msa0719910:CDS | 35.0% | |
ACAAGATACTACTGCTTCTA+TGG | + | chr5_1:15581348-15581367 | Msa0719910:CDS | 35.0% | |
TCAAAAGAGGCTGAATTTGA+AGG | - | chr5_1:15581418-15581437 | None:intergenic | 35.0% | |
TTCCTGTTTCAGTTTCTCAT+GGG | + | chr5_1:15581452-15581471 | Msa0719910:CDS | 35.0% | |
!! | GTTAGATACTGGTTTGTTTC+TGG | + | chr5_1:15581532-15581551 | Msa0719910:intron | 35.0% |
! | CGAGAGATATTTTCACAAAG+TGG | + | chr5_1:15581892-15581911 | Msa0719910:intron | 35.0% |
ACTGAAGAGAGAAGAAACAT+AGG | - | chr5_1:15582201-15582220 | None:intergenic | 35.0% | |
GAATAACAACTAGAGATGTC+TGG | - | chr5_1:15582233-15582252 | None:intergenic | 35.0% | |
AAGCATGCTTTCTTGTAGTT+CGG | + | chr5_1:15582261-15582280 | Msa0719910:intron | 35.0% | |
GTAAGTGTCAAATTAGTCAC+TGG | + | chr5_1:15582284-15582303 | Msa0719910:CDS | 35.0% | |
TCAGTATCAGGAACAGAATT+TGG | + | chr5_1:15582388-15582407 | Msa0719910:CDS | 35.0% | |
!!! | AGGTTTTTTGCAGAAAGCAA+AGG | + | chr5_1:15582492-15582511 | Msa0719910:intron | 35.0% |
TTAGCAGTATTATCACTGAC+AGG | - | chr5_1:15582633-15582652 | None:intergenic | 35.0% | |
!!! | TATGTGTCGGATTTAGCTTT+TGG | - | chr5_1:15582825-15582844 | None:intergenic | 35.0% |
!! | CACTTAGAAGTGTCTGTTAT+TGG | - | chr5_1:15582912-15582931 | None:intergenic | 35.0% |
TCTAGCATCTGTTGAAAATG+AGG | + | chr5_1:15583238-15583257 | Msa0719910:intron | 35.0% | |
AAATTGACTATTACTCCCTC+CGG | + | chr5_1:15583289-15583308 | Msa0719910:intron | 35.0% | |
TTCTTGTAAAAAAGACCGGA+GGG | - | chr5_1:15583307-15583326 | None:intergenic | 35.0% | |
TTTCTTGTAAAAAAGACCGG+AGG | - | chr5_1:15583308-15583327 | None:intergenic | 35.0% | |
GATGATAATAATACTCCCTC+CGG | - | chr5_1:15583442-15583461 | None:intergenic | 35.0% | |
! | CTTTCCTTATGAACTTTTCG+TGG | + | chr5_1:15583526-15583545 | Msa0719910:CDS | 35.0% |
AGTTCCACGAAAAGTTCATA+AGG | - | chr5_1:15583533-15583552 | None:intergenic | 35.0% | |
AAGGTGAAACTATTTCCCTT+TGG | + | chr5_1:15583566-15583585 | Msa0719910:CDS | 35.0% | |
TTTATGTGATGTAACTGCTC+TGG | + | chr5_1:15583649-15583668 | Msa0719910:intron | 35.0% | |
AGAAGGATGAGAGATTAAAG+GGG | + | chr5_1:15583674-15583693 | Msa0719910:intron | 35.0% | |
TCGTGATGAACGAAATACTT+GGG | + | chr5_1:15583819-15583838 | Msa0719910:intron | 35.0% | |
GAAATACTTGGGAATCAAGT+AGG | + | chr5_1:15583830-15583849 | Msa0719910:intron | 35.0% | |
CTAATTCAGAAGGCAAAAGA+AGG | + | chr5_1:15584268-15584287 | Msa0719910:intron | 35.0% | |
AATATCCCAATTGGAGAAAG+TGG | - | chr5_1:15584301-15584320 | None:intergenic | 35.0% | |
! | AAGATGCGCATGAATTTTTG+AGG | + | chr5_1:15584368-15584387 | Msa0719910:CDS | 35.0% |
!!! | TTGTTTTGAAGTAGCAGCTA+AGG | - | chr5_1:15584440-15584459 | None:intergenic | 35.0% |
!! | GCATTGGCTTTATGAGAAAT+TGG | + | chr5_1:15584470-15584489 | Msa0719910:intron | 35.0% |
TATATTTGTCTCAAGGAAGC+CGG | + | chr5_1:15584526-15584545 | Msa0719910:CDS | 35.0% | |
!! | AGAGTTGTTTCTTCTGTCAA+AGG | - | chr5_1:15584562-15584581 | None:intergenic | 35.0% |
ACAGAAGAAACAACTCTCAT+TGG | + | chr5_1:15584565-15584584 | Msa0719910:CDS | 35.0% | |
! | ACTCTCATTGGATACACTTT+TGG | + | chr5_1:15584577-15584596 | Msa0719910:CDS | 35.0% |
TTTATTGAGTAGGAAAGGGA+TGG | + | chr5_1:15584675-15584694 | Msa0719910:intron | 35.0% | |
TTATTGAGTAGGAAAGGGAT+GGG | + | chr5_1:15584676-15584695 | Msa0719910:intron | 35.0% | |
GATCTTACTGTTGAGATTGA+TGG | + | chr5_1:15584800-15584819 | Msa0719910:CDS | 35.0% | |
TGGAGATATTGAAACTTTGG+AGG | + | chr5_1:15584820-15584839 | Msa0719910:CDS | 35.0% | |
! | AGATATTGAAACTTTGGAGG+AGG | + | chr5_1:15584823-15584842 | Msa0719910:CDS | 35.0% |
! | ATTTACAGCGCCTGAAATTT+TGG | + | chr5_1:15584856-15584875 | Msa0719910:CDS | 35.0% |
TAAATGTGACATGGAAGGAA+AGG | - | chr5_1:15584918-15584937 | None:intergenic | 35.0% | |
! | TCCTTTTCTCAAACGGTATA+TGG | + | chr5_1:15585036-15585055 | Msa0719910:intron | 35.0% |
TCCATATACCGTTTGAGAAA+AGG | - | chr5_1:15585040-15585059 | None:intergenic | 35.0% | |
AACTCAGATTTGGCCATAAA+AGG | - | chr5_1:15585350-15585369 | None:intergenic | 35.0% | |
! | GTGAGTTTTCTTCATCTTTG+TGG | + | chr5_1:15585470-15585489 | Msa0719910:intron | 35.0% |
! | GCTTCTCATGATTTTAAGCT+AGG | + | chr5_1:15585518-15585537 | Msa0719910:intron | 35.0% |
! | CATGATTTTAAGCTAGGTTG+AGG | + | chr5_1:15585524-15585543 | Msa0719910:intron | 35.0% |
! | AGGGAGTAAAAGACAACTTT+TGG | + | chr5_1:15585544-15585563 | Msa0719910:intron | 35.0% |
! | GGGAGTAAAAGACAACTTTT+GGG | + | chr5_1:15585545-15585564 | Msa0719910:intron | 35.0% |
!!! | AAGCGGTTTTAAAGAATCGT+GGG | - | chr5_1:15585619-15585638 | None:intergenic | 35.0% |
!! | AAAGGCACTATCAATCAAAC+TGG | + | chr5_1:15585725-15585744 | Msa0719910:intron | 35.0% |
GATATAGCACTATTGTGTAG+CGG | - | chr5_1:15586092-15586111 | None:intergenic | 35.0% | |
GCTATTTAACAACACTGCTT+TGG | + | chr5_1:15586221-15586240 | Msa0719910:intron | 35.0% | |
!! | AACCAAAGCATTTTCCTACT+AGG | - | chr5_1:15586308-15586327 | None:intergenic | 35.0% |
GATAGTTAAAGTGGTCAATG+CGG | + | chr5_1:15586391-15586410 | Msa0719910:intron | 35.0% | |
TTATTCATCCGTTGCATACA+TGG | + | chr5_1:15586508-15586527 | Msa0719910:intron | 35.0% | |
GTTTATCACCATGTATGCAA+CGG | - | chr5_1:15586519-15586538 | None:intergenic | 35.0% | |
CATGGTGATAAACTACTCAA+AGG | + | chr5_1:15586526-15586545 | Msa0719910:intron | 35.0% | |
TGGTGATAAACTACTCAAAG+GGG | + | chr5_1:15586528-15586547 | Msa0719910:intron | 35.0% | |
!! | TCTTAAAGCTTTATTGGGAG+GGG | + | chr5_1:15586606-15586625 | Msa0719910:intron | 35.0% |
!! | GTTTTTCAGATGTGAATTCG+TGG | + | chr5_1:15586686-15586705 | Msa0719910:intron | 35.0% |
CTTCAACAATTGATTGCTGT+TGG | + | chr5_1:15586933-15586952 | Msa0719910:intron | 35.0% | |
TAAAACCCATGGGACAAAAT+TGG | - | chr5_1:15587062-15587081 | None:intergenic | 35.0% | |
CTTAAGGTCATAAAACCCAT+GGG | - | chr5_1:15587072-15587091 | None:intergenic | 35.0% | |
ACTTAAGGTCATAAAACCCA+TGG | - | chr5_1:15587073-15587092 | None:intergenic | 35.0% | |
!!! | GGTATTTTTGGGAAAGAAGT+TGG | - | chr5_1:15587256-15587275 | None:intergenic | 35.0% |
TTAATAAGACCCACTTGCAT+AGG | + | chr5_1:15587288-15587307 | Msa0719910:intron | 35.0% | |
TAATAAGACCCACTTGCATA+GGG | + | chr5_1:15587289-15587308 | Msa0719910:intron | 35.0% | |
CAGTATTGTCAACTTCTTCT+TGG | - | chr5_1:15587578-15587597 | None:intergenic | 35.0% | |
CAAGAAGAAGTTGACAATAC+TGG | + | chr5_1:15587576-15587595 | Msa0719910:CDS | 35.0% | |
TGCTATGTGAAGAACATTCA+AGG | + | chr5_1:15587914-15587933 | Msa0719910:CDS | 35.0% | |
TGAAGAACATTCAAGGAGAA+TGG | + | chr5_1:15587921-15587940 | Msa0719910:CDS | 35.0% | |
AATTGAGAATCAATTTGGGG+AGG | + | chr5_1:15588129-15588148 | Msa0719910:intron | 35.0% | |
ATTGAGAATCAATTTGGGGA+GGG | + | chr5_1:15588130-15588149 | Msa0719910:intron | 35.0% | |
CAAACTTAAAATGAGGACTC+AGG | - | chr5_1:15588214-15588233 | None:intergenic | 35.0% | |
TTAAGTTTGTCCAAAGAGGA+AGG | + | chr5_1:15588225-15588244 | Msa0719910:intron | 35.0% | |
! | GGGTTTTTACCCATTAAAAG+TGG | + | chr5_1:15588372-15588391 | Msa0719910:intron | 35.0% |
TTTCTAGGCTTAAGAAGCTA+TGG | + | chr5_1:15588410-15588429 | Msa0719910:intron | 35.0% | |
! | ATTTGCCAGTCCTTTTCAAA+AGG | - | chr5_1:15588562-15588581 | None:intergenic | 35.0% |
CATACATGCTTCTTTATGCA+AGG | + | chr5_1:15588703-15588722 | Msa0719910:CDS | 35.0% | |
CTTGAACTTTCCAGTTGAAA+AGG | - | chr5_1:15588883-15588902 | None:intergenic | 35.0% | |
TTTCAACTGGAAAGTTCAAG+AGG | + | chr5_1:15588883-15588902 | Msa0719910:CDS | 35.0% | |
ATTGCCAAAGGAATCATCAA+CGG | - | chr5_1:15589021-15589040 | None:intergenic | 35.0% | |
GTATACAGATTCATTGCCAA+AGG | - | chr5_1:15589033-15589052 | None:intergenic | 35.0% | |
AATCTGTATACCCAGAAGAA+TGG | + | chr5_1:15589042-15589061 | Msa0719910:CDS | 35.0% | |
AGTTGAATCTCCATTCTTCT+GGG | - | chr5_1:15589055-15589074 | None:intergenic | 35.0% | |
TAGTTGAATCTCCATTCTTC+TGG | - | chr5_1:15589056-15589075 | None:intergenic | 35.0% | |
AGAATGGAGATTCAACTATC+GGG | + | chr5_1:15589058-15589077 | Msa0719910:CDS | 35.0% | |
TTGCAGTACTACAAGTACAA+AGG | + | chr5_1:15589145-15589164 | Msa0719910:CDS | 35.0% | |
TACTACAAGTACAAAGGACT+CGG | + | chr5_1:15589151-15589170 | Msa0719910:CDS | 35.0% | |
!!! | ATTACATTTTTGGTGAGGCA+GGG | + | chr5_1:15589195-15589214 | Msa0719910:CDS | 35.0% |
AGTTGGAAGAAATTCCATAC+TGG | - | chr5_1:15589235-15589254 | None:intergenic | 35.0% | |
GTATGGAATTTCTTCCAACT+CGG | + | chr5_1:15589235-15589254 | Msa0719910:CDS | 35.0% | |
! | ATCTGTATGCAAGGTATCAT+AGG | - | chr5_1:15589273-15589292 | None:intergenic | 35.0% |
AAGAATTCTTGCGCTAATAC+TGG | - | chr5_1:15589598-15589617 | None:intergenic | 35.0% | |
!! | CAAGCTTCAGTTTCTAGTGA+CGG | + | chr5_1:15581041-15581060 | Msa0719910:five_prime_UTR | 40.0% |
AATGGGAAAGATAGTTGCGT+CGG | - | chr5_1:15581104-15581123 | None:intergenic | 40.0% | |
! | CTTTCCCATTTTGCCCTTAT+AGG | + | chr5_1:15581114-15581133 | Msa0719910:five_prime_UTR | 40.0% |
TTTCCTCGCATAGAGCAAAA+GGG | - | chr5_1:15581144-15581163 | None:intergenic | 40.0% | |
! | TTTTCCTCGCATAGAGCAAA+AGG | - | chr5_1:15581145-15581164 | None:intergenic | 40.0% |
AGAAGAGAGAAGAGGTTATG+AGG | + | chr5_1:15581320-15581339 | Msa0719910:CDS | 40.0% | |
TACTGCTTCTATGGCTCATA+TGG | + | chr5_1:15581357-15581376 | Msa0719910:CDS | 40.0% | |
ATGGCTCATATGGAAGCTTA+TGG | + | chr5_1:15581367-15581386 | Msa0719910:CDS | 40.0% | |
GTTCCTGTTTCAGTTTCTCA+TGG | + | chr5_1:15581451-15581470 | Msa0719910:CDS | 40.0% | |
TACCCATGAGAAACTGAAAC+AGG | - | chr5_1:15581457-15581476 | None:intergenic | 40.0% | |
!! | TTGAAATTGAGTAATGGGCG+TGG | + | chr5_1:15581618-15581637 | Msa0719910:intron | 40.0% |
! | AATTAGGGTATTCCGGATTG+AGG | + | chr5_1:15581697-15581716 | Msa0719910:intron | 40.0% |
! | ATTAGGGTATTCCGGATTGA+GGG | + | chr5_1:15581698-15581717 | Msa0719910:intron | 40.0% |
! | GGAGGTCTAAGTCTATCTTT+TGG | + | chr5_1:15581725-15581744 | Msa0719910:intron | 40.0% |
! | TAGCCAATGATATTTGCTGC+TGG | + | chr5_1:15581929-15581948 | Msa0719910:intron | 40.0% |
! | ATTTCTTGCCCCATGTTTTC+CGG | - | chr5_1:15581955-15581974 | None:intergenic | 40.0% |
! | TTTGACTCGTGATATTGTCG+TGG | + | chr5_1:15582038-15582057 | Msa0719910:intron | 40.0% |
! | TTGACTCGTGATATTGTCGT+GGG | + | chr5_1:15582039-15582058 | Msa0719910:intron | 40.0% |
AGCATGCTTTCTTGTAGTTC+GGG | + | chr5_1:15582262-15582281 | Msa0719910:intron | 40.0% | |
CAAATTAGTCACTGGAGACA+AGG | + | chr5_1:15582292-15582311 | Msa0719910:CDS | 40.0% | |
ACGACGAGAATGTTACATCT+AGG | + | chr5_1:15582362-15582381 | Msa0719910:CDS | 40.0% | |
CGACGAGAATGTTACATCTA+GGG | + | chr5_1:15582363-15582382 | Msa0719910:CDS | 40.0% | |
! | GGAACAGAATTTGGTCTTCA+TGG | + | chr5_1:15582397-15582416 | Msa0719910:CDS | 40.0% |
!! | AGCAACAGAAGCATTAATGC+TGG | - | chr5_1:15582556-15582575 | None:intergenic | 40.0% |
ATCCGACACATATCATGATG+AGG | + | chr5_1:15582833-15582852 | Msa0719910:CDS | 40.0% | |
TGCCTCATCATGATATGTGT+CGG | - | chr5_1:15582838-15582857 | None:intergenic | 40.0% | |
! | TCATGATGAGGCATCAAAGT+TGG | + | chr5_1:15582845-15582864 | Msa0719910:CDS | 40.0% |
! | CATGATGAGGCATCAAAGTT+GGG | + | chr5_1:15582846-15582865 | Msa0719910:CDS | 40.0% |
TAACAGACACTTCTAAGTGC+AGG | + | chr5_1:15582913-15582932 | Msa0719910:CDS | 40.0% | |
!! | AACGCTAACTTTTGAAGGCA+AGG | - | chr5_1:15583123-15583142 | None:intergenic | 40.0% |
! | GGAACAACGCTAACTTTTGA+AGG | - | chr5_1:15583128-15583147 | None:intergenic | 40.0% |
! | CTTTTGAGCTTCTAAACTGC+TGG | - | chr5_1:15583205-15583224 | None:intergenic | 40.0% |
TTTCTTGTAAATAGGACCGG+AGG | + | chr5_1:15583423-15583442 | Msa0719910:intron | 40.0% | |
TTCTTGTAAATAGGACCGGA+GGG | + | chr5_1:15583424-15583443 | Msa0719910:intron | 40.0% | |
ATGTAACTGCTCTGGTAAGA+AGG | + | chr5_1:15583657-15583676 | Msa0719910:intron | 40.0% | |
AGAGATTAAAGGGGATAGTG+AGG | + | chr5_1:15583683-15583702 | Msa0719910:intron | 40.0% | |
CTCGTGATGAACGAAATACT+TGG | + | chr5_1:15583818-15583837 | Msa0719910:intron | 40.0% | |
TTCCGACAAAAGTAGCTTGA+AGG | - | chr5_1:15583856-15583875 | None:intergenic | 40.0% | |
!! | CTACTTTTGTCGGAACGTTT+AGG | + | chr5_1:15583861-15583880 | Msa0719910:intron | 40.0% |
! | GAAACATTCTAGTTGTTGGC+TGG | + | chr5_1:15583883-15583902 | Msa0719910:intron | 40.0% |
! | GAGGCATTTCATTAGCAAGA+GGG | - | chr5_1:15584024-15584043 | None:intergenic | 40.0% |
!! | AGAGGCATTTCATTAGCAAG+AGG | - | chr5_1:15584025-15584044 | None:intergenic | 40.0% |
TGTTCTCAATAGGTCAGAAG+AGG | + | chr5_1:15584215-15584234 | Msa0719910:intron | 40.0% | |
GTTCTCAATAGGTCAGAAGA+GGG | + | chr5_1:15584216-15584235 | Msa0719910:intron | 40.0% | |
TTCTCAATAGGTCAGAAGAG+GGG | + | chr5_1:15584217-15584236 | Msa0719910:intron | 40.0% | |
ACTTCTCCACTTTCTCCAAT+TGG | + | chr5_1:15584292-15584311 | Msa0719910:CDS | 40.0% | |
CTTCTCCACTTTCTCCAATT+GGG | + | chr5_1:15584293-15584312 | Msa0719910:CDS | 40.0% | |
CACAAGATTGGAAGTCATCT+TGG | + | chr5_1:15584331-15584350 | Msa0719910:CDS | 40.0% | |
ATTGGAAGTCATCTTGGACA+TGG | + | chr5_1:15584337-15584356 | Msa0719910:CDS | 40.0% | |
TTGGAAGTCATCTTGGACAT+GGG | + | chr5_1:15584338-15584357 | Msa0719910:CDS | 40.0% | |
TGAGAAATTGGTCCATCAAC+AGG | + | chr5_1:15584482-15584501 | Msa0719910:intron | 40.0% | |
GAGAAATTGGTCCATCAACA+GGG | + | chr5_1:15584483-15584502 | Msa0719910:intron | 40.0% | |
AGAAATTGGTCCATCAACAG+GGG | + | chr5_1:15584484-15584503 | Msa0719910:intron | 40.0% | |
TGTCAAAGGACTTGATAGAC+CGG | - | chr5_1:15584548-15584567 | None:intergenic | 40.0% | |
! | CTCATTGGATACACTTTTGG+AGG | + | chr5_1:15584580-15584599 | Msa0719910:CDS | 40.0% |
TGGAGGATATCTACGATCTA+AGG | + | chr5_1:15584597-15584616 | Msa0719910:CDS | 40.0% | |
! | ATAAAGTGCTTAAGGTGCCT+GGG | + | chr5_1:15584749-15584768 | Msa0719910:CDS | 40.0% |
! | TGAGAGGTATGAGAGAATGA+TGG | + | chr5_1:15584778-15584797 | Msa0719910:CDS | 40.0% |
! | ATGGCCAAATCTGAGTTTTC+CGG | + | chr5_1:15585353-15585372 | Msa0719910:CDS | 40.0% |
!! | TTTTAAAGAATCGTGGGGGT+GGG | - | chr5_1:15585613-15585632 | None:intergenic | 40.0% |
!!! | AGCGGTTTTAAAGAATCGTG+GGG | - | chr5_1:15585618-15585637 | None:intergenic | 40.0% |
!!! | GAAGCGGTTTTAAAGAATCG+TGG | - | chr5_1:15585620-15585639 | None:intergenic | 40.0% |
!! | TCTTTAAAACCGCTTCCTTC+CGG | + | chr5_1:15585624-15585643 | Msa0719910:intron | 40.0% |
!!! | AGTTTTTTCCCTGTCCAGAT+GGG | - | chr5_1:15585655-15585674 | None:intergenic | 40.0% |
TACACACACTTAGTGGGATA+AGG | - | chr5_1:15585915-15585934 | None:intergenic | 40.0% | |
TTATCCTGCTATCCCAATCT+CGG | + | chr5_1:15585982-15586001 | Msa0719910:intron | 40.0% | |
TGGACCAATGTTGTCAATTG+CGG | + | chr5_1:15586037-15586056 | Msa0719910:intron | 40.0% | |
CTATCCGCAATTGACAACAT+TGG | - | chr5_1:15586044-15586063 | None:intergenic | 40.0% | |
ATGTTGTCAATTGCGGATAG+TGG | + | chr5_1:15586044-15586063 | Msa0719910:intron | 40.0% | |
!! | TTGCGGATAGTGGAAAATAG+TGG | + | chr5_1:15586054-15586073 | Msa0719910:intron | 40.0% |
ATAGATGCGCTATACCACTA+TGG | - | chr5_1:15586197-15586216 | None:intergenic | 40.0% | |
! | ATTTTCCTACTAGGTGGAGT+TGG | - | chr5_1:15586299-15586318 | None:intergenic | 40.0% |
!! | CAAAGCATTTTCCTACTAGG+TGG | - | chr5_1:15586305-15586324 | None:intergenic | 40.0% |
CACCTAGTAGGAAAATGCTT+TGG | + | chr5_1:15586303-15586322 | Msa0719910:intron | 40.0% | |
!! | AAACTACTCAAAGGGGTGTT+AGG | + | chr5_1:15586535-15586554 | Msa0719910:intron | 40.0% |
AAGAAGGGTCATAAACCTCT+TGG | + | chr5_1:15586574-15586593 | Msa0719910:intron | 40.0% | |
GCATGACTTCAAAGAGAATC+CGG | - | chr5_1:15586783-15586802 | None:intergenic | 40.0% | |
TCTCATTTGTCTCATTGCAG+TGG | - | chr5_1:15586805-15586824 | None:intergenic | 40.0% | |
GACAAAATTGGCATTGTGCT+TGG | - | chr5_1:15587050-15587069 | None:intergenic | 40.0% | |
! | ACAATGCCAATTTTGTCCCA+TGG | + | chr5_1:15587053-15587072 | Msa0719910:intron | 40.0% |
! | CAATGCCAATTTTGTCCCAT+GGG | + | chr5_1:15587054-15587073 | Msa0719910:intron | 40.0% |
! | TGGTTCTATATTACTCCCTG+TGG | + | chr5_1:15587166-15587185 | Msa0719910:intron | 40.0% |
! | TGAGCGTTAGCGGTATTTTT+GGG | - | chr5_1:15587267-15587286 | None:intergenic | 40.0% |
! | ATGAGCGTTAGCGGTATTTT+TGG | - | chr5_1:15587268-15587287 | None:intergenic | 40.0% |
CAATAAAGTAAGGGGGCAAA+AGG | + | chr5_1:15587335-15587354 | Msa0719910:intron | 40.0% | |
GAAGAAGTTGACAATACTGG+AGG | + | chr5_1:15587579-15587598 | Msa0719910:CDS | 40.0% | |
TCATGTATGGAGTCATATCC+AGG | - | chr5_1:15587802-15587821 | None:intergenic | 40.0% | |
GATATGACTCCATACATGAG+TGG | + | chr5_1:15587803-15587822 | Msa0719910:CDS | 40.0% | |
TCCATACATGAGTGGAAGAA+AGG | + | chr5_1:15587811-15587830 | Msa0719910:CDS | 40.0% | |
TCCTTTCTTCCACTCATGTA+TGG | - | chr5_1:15587815-15587834 | None:intergenic | 40.0% | |
ACATTCAAGGAGAATGGTTC+AGG | + | chr5_1:15587927-15587946 | Msa0719910:CDS | 40.0% | |
!! | ATAATCTCATTTTAGGGGGG+AGG | - | chr5_1:15588021-15588040 | None:intergenic | 40.0% |
CAAATGTTCTCCTTCCTCTT+TGG | - | chr5_1:15588238-15588257 | None:intergenic | 40.0% | |
!! | AGACTCCTTTTGAAAAGGAC+TGG | + | chr5_1:15588554-15588573 | Msa0719910:intron | 40.0% |
TGACATTTGTGCTTCTCTTC+AGG | + | chr5_1:15588641-15588660 | Msa0719910:intron | 40.0% | |
AAGACTCTTGACAATTCGAC+AGG | - | chr5_1:15588672-15588691 | None:intergenic | 40.0% | |
! | ATTGCTACTTACTGAACCCA+GGG | - | chr5_1:15588856-15588875 | None:intergenic | 40.0% |
! | AGCAATGCAACCTTTTCAAC+TGG | + | chr5_1:15588870-15588889 | Msa0719910:CDS | 40.0% |
AAAGTTCAAGAGGAGAAGCT+TGG | + | chr5_1:15588893-15588912 | Msa0719910:CDS | 40.0% | |
AGAATCAGCATTTGTAGCCA+TGG | - | chr5_1:15588955-15588974 | None:intergenic | 40.0% | |
!! | AATGCCGTTGATGATTCCTT+TGG | + | chr5_1:15589014-15589033 | Msa0719910:CDS | 40.0% |
GAATGGAGATTCAACTATCG+GGG | + | chr5_1:15589059-15589078 | Msa0719910:CDS | 40.0% | |
CTATCGGGGAAGAAATACTA+TGG | + | chr5_1:15589073-15589092 | Msa0719910:CDS | 40.0% | |
!!! | GATTACATTTTTGGTGAGGC+AGG | + | chr5_1:15589194-15589213 | Msa0719910:CDS | 40.0% |
CACTGAGAAATCTGTATGCA+AGG | - | chr5_1:15589282-15589301 | None:intergenic | 40.0% | |
CTTGCATACAGATTTCTCAG+TGG | + | chr5_1:15589280-15589299 | Msa0719910:CDS | 40.0% | |
! | GTACAGCAGAACTTTTGTCA+TGG | - | chr5_1:15589430-15589449 | None:intergenic | 40.0% |
CGTCACTAGAAACTGAAGCT+TGG | - | chr5_1:15581043-15581062 | None:intergenic | 45.0% | |
! | TAACCCTTTTGCTCTATGCG+AGG | + | chr5_1:15581138-15581157 | Msa0719910:five_prime_UTR | 45.0% |
! | TTTTTCCGTGGATCCTGTGT+TGG | + | chr5_1:15581172-15581191 | Msa0719910:five_prime_UTR | 45.0% |
! | TTTTCCGTGGATCCTGTGTT+GGG | + | chr5_1:15581173-15581192 | Msa0719910:five_prime_UTR | 45.0% |
TGCTGAAGAGAAGAGAGAAG+AGG | + | chr5_1:15581312-15581331 | Msa0719910:CDS | 45.0% | |
GAGAGAAGAGGTTATGAGGT+TGG | + | chr5_1:15581324-15581343 | Msa0719910:CDS | 45.0% | |
GCTGCAAAGCTGTTAGATAC+TGG | + | chr5_1:15581521-15581540 | Msa0719910:CDS | 45.0% | |
! | GTATTCCGGATTGAGGGTTT+TGG | + | chr5_1:15581704-15581723 | Msa0719910:intron | 45.0% |
! | CAATGATATTTGCTGCTGGC+CGG | + | chr5_1:15581933-15581952 | Msa0719910:intron | 45.0% |
GGAAAACATGGGGCAAAAGT+GGG | + | chr5_1:15581987-15582006 | Msa0719910:intron | 45.0% | |
GAAAACATGGGGCAAAAGTG+GGG | + | chr5_1:15581988-15582007 | Msa0719910:intron | 45.0% | |
TGACTCGTGATATTGTCGTG+GGG | + | chr5_1:15582040-15582059 | Msa0719910:intron | 45.0% | |
AAGGTCACAAGGACGAATGT+TGG | + | chr5_1:15582311-15582330 | Msa0719910:CDS | 45.0% | |
! | ACATCTAGGGCATCAGTATC+AGG | + | chr5_1:15582376-15582395 | Msa0719910:CDS | 45.0% |
ATGAGTCATGAGTCTCGTGA+CGG | - | chr5_1:15582602-15582621 | None:intergenic | 45.0% | |
GTTGCACTCCTCATTTCCTT+TGG | + | chr5_1:15582692-15582711 | Msa0719910:CDS | 45.0% | |
AGCAACACTACTGATGAGAC+TGG | + | chr5_1:15582783-15582802 | Msa0719910:CDS | 45.0% | |
TGGAAGAATCGCATTTGTCC+AGG | + | chr5_1:15582985-15583004 | Msa0719910:CDS | 45.0% | |
TGTCCAGGTACAAAGAAGCA+CGG | + | chr5_1:15583000-15583019 | Msa0719910:CDS | 45.0% | |
CCACAGTTTGTAAGGCCAAA+GGG | - | chr5_1:15583584-15583603 | None:intergenic | 45.0% | |
!! | CCTTTGGCCTTACAAACTGT+GGG | + | chr5_1:15583582-15583601 | Msa0719910:CDS | 45.0% |
ACCTGTTCCCACAGTTTGTA+AGG | - | chr5_1:15583592-15583611 | None:intergenic | 45.0% | |
!!! | GGCCTTCAAGCTACTTTTGT+CGG | + | chr5_1:15583851-15583870 | Msa0719910:intron | 45.0% |
TAGCATAACAGCTGCAGTAG+AGG | - | chr5_1:15584043-15584062 | None:intergenic | 45.0% | |
TAATGCAGCACTCCAATGCT+TGG | + | chr5_1:15584061-15584080 | Msa0719910:intron | 45.0% | |
GGTACTTGCATCGTTTCGAA+TGG | - | chr5_1:15584127-15584146 | None:intergenic | 45.0% | |
! | GATAAAGTGCTTAAGGTGCC+TGG | + | chr5_1:15584748-15584767 | Msa0719910:intron | 45.0% |
! | TAAAGTGCTTAAGGTGCCTG+GGG | + | chr5_1:15584750-15584769 | Msa0719910:CDS | 45.0% |
GTTGCCGGAAAACTCAGATT+TGG | - | chr5_1:15585360-15585379 | None:intergenic | 45.0% | |
! | AGACAACTTTTGGGCCCTTA+AGG | + | chr5_1:15585554-15585573 | Msa0719910:intron | 45.0% |
! | TTTTCTGCAGTGGGCCTTAA+GGG | - | chr5_1:15585571-15585590 | None:intergenic | 45.0% |
! | TTTTTCTGCAGTGGGCCTTA+AGG | - | chr5_1:15585572-15585591 | None:intergenic | 45.0% |
AAGGCCCACTGCAGAAAAAT+AGG | + | chr5_1:15585573-15585592 | Msa0719910:intron | 45.0% | |
AGGCCCACTGCAGAAAAATA+GGG | + | chr5_1:15585574-15585593 | Msa0719910:intron | 45.0% | |
!! | GCTCCCTATTTTTCTGCAGT+GGG | - | chr5_1:15585580-15585599 | None:intergenic | 45.0% |
!! | AGCTCCCTATTTTTCTGCAG+TGG | - | chr5_1:15585581-15585600 | None:intergenic | 45.0% |
TTTAAAGAATCGTGGGGGTG+GGG | - | chr5_1:15585612-15585631 | None:intergenic | 45.0% | |
!!! | GTTTTAAAGAATCGTGGGGG+TGG | - | chr5_1:15585614-15585633 | None:intergenic | 45.0% |
!!! | GCGGTTTTAAAGAATCGTGG+GGG | - | chr5_1:15585617-15585636 | None:intergenic | 45.0% |
!!! | CAGTTTTTTCCCTGTCCAGA+TGG | - | chr5_1:15585656-15585675 | None:intergenic | 45.0% |
ACACTTAGTGGGATAAGGCT+TGG | - | chr5_1:15585910-15585929 | None:intergenic | 45.0% | |
GTGCTATATCGTCACTGCAA+CGG | + | chr5_1:15586102-15586121 | Msa0719910:intron | 45.0% | |
! | CACTATGGCATAGCGGAATT+TGG | - | chr5_1:15586182-15586201 | None:intergenic | 45.0% |
CAAATTCCGCTATGCCATAG+TGG | + | chr5_1:15586180-15586199 | Msa0719910:intron | 45.0% | |
GCTATACCACTATGGCATAG+CGG | - | chr5_1:15586189-15586208 | None:intergenic | 45.0% | |
CATGACTCGTGTCATGTGTA+AGG | - | chr5_1:15586248-15586267 | None:intergenic | 45.0% | |
CTTACACATGACACGAGTCA+TGG | + | chr5_1:15586246-15586265 | Msa0719910:intron | 45.0% | |
! | TGACACGAGTCATGGCTTTT+TGG | + | chr5_1:15586254-15586273 | Msa0719910:intron | 45.0% |
CTTAACCAACTCCACCTAGT+AGG | + | chr5_1:15586291-15586310 | Msa0719910:intron | 45.0% | |
AGGGTCATAAACCTCTTGGA+AGG | + | chr5_1:15586578-15586597 | Msa0719910:intron | 45.0% | |
TTCTATCAAAGCCCGGAAGT+AGG | - | chr5_1:15586719-15586738 | None:intergenic | 45.0% | |
GACAGGATTCTATCAAAGCC+CGG | - | chr5_1:15586726-15586745 | None:intergenic | 45.0% | |
AATTTGGGGAAAGAATGCCG+TGG | + | chr5_1:15586846-15586865 | Msa0719910:intron | 45.0% | |
ATGCCGTGGAATCTTGTGAT+TGG | + | chr5_1:15586860-15586879 | Msa0719910:intron | 45.0% | |
CAGCCAATCACAAGATTCCA+CGG | - | chr5_1:15586866-15586885 | None:intergenic | 45.0% | |
! | AATGTTTAGAGGGGCACACA+TGG | + | chr5_1:15587146-15587165 | Msa0719910:intron | 45.0% |
TCCATCTTCCCTATGCAAGT+GGG | - | chr5_1:15587300-15587319 | None:intergenic | 45.0% | |
GAGTCATATCCAGGACTTCA+GGG | - | chr5_1:15587793-15587812 | None:intergenic | 45.0% | |
TTATGCAGTGGTCGTCCATT+TGG | + | chr5_1:15587856-15587875 | Msa0719910:CDS | 45.0% | |
! | TTGCTACTTACTGAACCCAG+GGG | - | chr5_1:15588855-15588874 | None:intergenic | 45.0% |
! | CATTGCTACTTACTGAACCC+AGG | - | chr5_1:15588857-15588876 | None:intergenic | 45.0% |
CGTCTTAGAAACAGCAGGAA+TGG | - | chr5_1:15588922-15588941 | None:intergenic | 45.0% | |
!! | TTCCTGCTGTTTCTAAGACG+CGG | + | chr5_1:15588922-15588941 | Msa0719910:CDS | 45.0% |
AGGAATCATCAACGGCATTC+CGG | - | chr5_1:15589013-15589032 | None:intergenic | 45.0% | |
TCGGGGAAGAAATACTATGG+TGG | + | chr5_1:15589076-15589095 | Msa0719910:CDS | 45.0% | |
CAGTGGACAATGATGCTGAT+AGG | + | chr5_1:15589297-15589316 | Msa0719910:CDS | 45.0% | |
TGGACAATGATGCTGATAGG+AGG | + | chr5_1:15589300-15589319 | Msa0719910:CDS | 45.0% | |
CTTTATCTTCCGAGTCTTGC+TGG | - | chr5_1:15589328-15589347 | None:intergenic | 45.0% | |
!! | TTATATTATTATCTTATTAT+TGG | - | chr5_1:15585800-15585819 | None:intergenic | 5.0% |
!! | AAAATAATATATTTATCAAA+TGG | - | chr5_1:15586896-15586915 | None:intergenic | 5.0% |
!!! | GATAAATATATTATTTTATT+AGG | + | chr5_1:15586899-15586918 | Msa0719910:intron | 5.0% |
TTTCCGTGGATCCTGTGTTG+GGG | + | chr5_1:15581174-15581193 | Msa0719910:five_prime_UTR | 50.0% | |
!! | TTCCGGATTGAGGGTTTTGG+AGG | + | chr5_1:15581707-15581726 | Msa0719910:intron | 50.0% |
GACCTCCAAAACCCTCAATC+CGG | - | chr5_1:15581712-15581731 | None:intergenic | 50.0% | |
CGGCCAGCAGCAAATATCAT+TGG | - | chr5_1:15581935-15581954 | None:intergenic | 50.0% | |
GGGAAAACATGGGGCAAAAG+TGG | + | chr5_1:15581986-15582005 | Msa0719910:intron | 50.0% | |
TCACTGGAGACAAGGTCACA+AGG | + | chr5_1:15582300-15582319 | Msa0719910:CDS | 50.0% | |
CAACACAGTTCCGTCGTTGT+CGG | - | chr5_1:15582676-15582695 | None:intergenic | 50.0% | |
! | GATGAGGCATCAAAGTTGGG+TGG | + | chr5_1:15582849-15582868 | Msa0719910:CDS | 50.0% |
! | TGATGTTCTAGCTGACGACG+TGG | + | chr5_1:15582965-15582984 | Msa0719910:CDS | 50.0% |
TCTCCGTGCTTCTTTGTACC+TGG | - | chr5_1:15583006-15583025 | None:intergenic | 50.0% | |
!! | CCCTTTGGCCTTACAAACTG+TGG | + | chr5_1:15583581-15583600 | Msa0719910:CDS | 50.0% |
CCCACAGTTTGTAAGGCCAA+AGG | - | chr5_1:15583585-15583604 | None:intergenic | 50.0% | |
GCCTTACAAACTGTGGGAAC+AGG | + | chr5_1:15583588-15583607 | Msa0719910:CDS | 50.0% | |
GCTGAGTATACGCCAAGCAT+TGG | - | chr5_1:15584076-15584095 | None:intergenic | 50.0% | |
CAATAGGTCAGAAGAGGGGA+TGG | + | chr5_1:15584221-15584240 | Msa0719910:intron | 50.0% | |
TCATCTTGGACATGGGAGAG+AGG | + | chr5_1:15584345-15584364 | Msa0719910:CDS | 50.0% | |
CATACCTCTCAGATTTCCCC+AGG | - | chr5_1:15584769-15584788 | None:intergenic | 50.0% | |
! | GAAACTTTGGAGGAGGCTCT+TGG | + | chr5_1:15584830-15584849 | Msa0719910:CDS | 50.0% |
TTTCATCCCCTCTTCCAGAG+CGG | - | chr5_1:15585301-15585320 | None:intergenic | 50.0% | |
TGTGGCTTCTATGCTGTGTG+CGG | + | chr5_1:15585434-15585453 | Msa0719910:intron | 50.0% | |
TTAAAGAATCGTGGGGGTGG+GGG | - | chr5_1:15585611-15585630 | None:intergenic | 50.0% | |
CTGCTATCCCAATCTCGGAT+CGG | + | chr5_1:15585987-15586006 | Msa0719910:intron | 50.0% | |
AAACCAGCCGATCCGAGATT+GGG | - | chr5_1:15585997-15586016 | None:intergenic | 50.0% | |
TAAACCAGCCGATCCGAGAT+TGG | - | chr5_1:15585998-15586017 | None:intergenic | 50.0% | |
!! | CGTGGACTAGTACCTACTTC+CGG | + | chr5_1:15586704-15586723 | Msa0719910:intron | 50.0% |
!! | GTGGACTAGTACCTACTTCC+GGG | + | chr5_1:15586705-15586724 | Msa0719910:intron | 50.0% |
ACCCACTTGCATAGGGAAGA+TGG | + | chr5_1:15587296-15587315 | Msa0719910:intron | 50.0% | |
GTCCATCTTCCCTATGCAAG+TGG | - | chr5_1:15587301-15587320 | None:intergenic | 50.0% | |
AGTTCAGTTCCCTGAAGTCC+TGG | + | chr5_1:15587781-15587800 | Msa0719910:CDS | 50.0% | |
GGAGTCATATCCAGGACTTC+AGG | - | chr5_1:15587794-15587813 | None:intergenic | 50.0% | |
GTTCAGGACTGATGACAGCA+GGG | + | chr5_1:15587943-15587962 | Msa0719910:CDS | 50.0% | |
GCAAGGTAATGATGCTGCAG+AGG | + | chr5_1:15588720-15588739 | Msa0719910:intron | 50.0% | |
! | CTTACTGAACCCAGGGGTTT+TGG | - | chr5_1:15588849-15588868 | None:intergenic | 50.0% |
TAAGACGCGGTCGAATTCCA+TGG | + | chr5_1:15588935-15588954 | Msa0719910:CDS | 50.0% | |
CTTATCCTGGTCCCCAACAC+AGG | - | chr5_1:15581188-15581207 | None:intergenic | 55.0% | |
CGAGCACAACGCATGGTAGT+AGG | - | chr5_1:15581502-15581521 | None:intergenic | 55.0% | |
TTTGCAGCGAGCACAACGCA+TGG | - | chr5_1:15581509-15581528 | None:intergenic | 55.0% | |
!! | GTAATGGGCGTGGTGCCATT+AGG | + | chr5_1:15581628-15581647 | Msa0719910:intron | 55.0% |
TTGCTGCTGGCCGGAAAACA+TGG | + | chr5_1:15581942-15581961 | Msa0719910:intron | 55.0% | |
TGCTGCTGGCCGGAAAACAT+GGG | + | chr5_1:15581943-15581962 | Msa0719910:intron | 55.0% | |
TGGGGCAAGAAATTTGCCGC+TGG | + | chr5_1:15581962-15581981 | Msa0719910:intron | 55.0% | |
GGCAAGAAATTTGCCGCTGG+CGG | + | chr5_1:15581965-15581984 | Msa0719910:intron | 55.0% | |
GCAAGAAATTTGCCGCTGGC+GGG | + | chr5_1:15581966-15581985 | Msa0719910:intron | 55.0% | |
GCCTTCGATTACCACCACCA+GGG | + | chr5_1:15582333-15582352 | Msa0719910:CDS | 55.0% | |
!! | TCCCTGGTGGTGGTAATCGA+AGG | - | chr5_1:15582337-15582356 | None:intergenic | 55.0% |
TTCGATTACCACCACCAGGG+AGG | + | chr5_1:15582336-15582355 | Msa0719910:CDS | 55.0% | |
ATTCTCGTCGTTGACCTCCC+TGG | - | chr5_1:15582353-15582372 | None:intergenic | 55.0% | |
GTAGCTTCCACCGACAACGA+CGG | + | chr5_1:15582663-15582682 | Msa0719910:CDS | 55.0% | |
CTCAACTGCACCCCTGTTGA+TGG | - | chr5_1:15584497-15584516 | None:intergenic | 55.0% | |
TAGCGCTCCCACTCTTGATG+CGG | - | chr5_1:15585218-15585237 | None:intergenic | 55.0% | |
TGTGCAGTTTGCGCCCATAG+CGG | + | chr5_1:15585265-15585284 | Msa0719910:CDS | 55.0% | |
CCAGATCTGCTCGTTCTGTG+CGG | + | chr5_1:15585399-15585418 | Msa0719910:CDS | 55.0% | |
TTGTGGCTGCTCGTTGTGTG+TGG | + | chr5_1:15585487-15585506 | Msa0719910:intron | 55.0% | |
TAAAGAATCGTGGGGGTGGG+GGG | - | chr5_1:15585610-15585629 | None:intergenic | 55.0% | |
TGGGCAAATCCGGAAGGAAG+CGG | - | chr5_1:15585636-15585655 | None:intergenic | 55.0% | |
TCCTTCCGGATTTGCCCATC+TGG | + | chr5_1:15585638-15585657 | Msa0719910:intron | 55.0% | |
TCCAGATGGGCAAATCCGGA+AGG | - | chr5_1:15585642-15585661 | None:intergenic | 55.0% | |
CCTGTCCAGATGGGCAAATC+CGG | - | chr5_1:15585646-15585665 | None:intergenic | 55.0% | |
CGGATTTGCCCATCTGGACA+GGG | + | chr5_1:15585644-15585663 | Msa0719910:intron | 55.0% | |
CGATCCGAGATTGGGATAGC+AGG | - | chr5_1:15585989-15586008 | None:intergenic | 55.0% | |
TATCCCAATCTCGGATCGGC+TGG | + | chr5_1:15585991-15586010 | Msa0719910:intron | 55.0% | |
GGTTCAGGACTGATGACAGC+AGG | + | chr5_1:15587942-15587961 | Msa0719910:CDS | 55.0% | |
!! | CTCATTTTAGGGGGGAGGAG+TGG | - | chr5_1:15588016-15588035 | None:intergenic | 55.0% |
AGGCACTCTCCAAAACCCCT+GGG | + | chr5_1:15588837-15588856 | Msa0719910:intron | 55.0% | |
GACCGCGTCTTAGAAACAGC+AGG | - | chr5_1:15588927-15588946 | None:intergenic | 55.0% | |
CTGTCCCTGCTTCTGCTGTA+CGG | - | chr5_1:15588982-15589001 | None:intergenic | 55.0% | |
TTGGTGAGGCAGGGTCCAAT+TGG | + | chr5_1:15589204-15589223 | Msa0719910:CDS | 55.0% | |
TCCAATTGGCACGGCCAGTA+TGG | + | chr5_1:15589218-15589237 | Msa0719910:CDS | 55.0% | |
TCCATACTGGCCGTGCCAAT+TGG | - | chr5_1:15589222-15589241 | None:intergenic | 55.0% | |
GGAAGAAGATGCAGCCGAGT+TGG | - | chr5_1:15589252-15589271 | None:intergenic | 55.0% | |
TAGGAGGCTCCAGCAAGACT+CGG | + | chr5_1:15589316-15589335 | Msa0719910:CDS | 55.0% | |
GGTCCCCAACACAGGATCCA+CGG | - | chr5_1:15581180-15581199 | None:intergenic | 60.0% | |
TGGATCCTGTGTTGGGGACC+AGG | + | chr5_1:15581180-15581199 | Msa0719910:five_prime_UTR | 60.0% | |
!! | GGGCGTGGTGCCATTAGGTT+AGG | + | chr5_1:15581633-15581652 | Msa0719910:intron | 60.0% |
GCTGCTGGCCGGAAAACATG+GGG | + | chr5_1:15581944-15581963 | Msa0719910:intron | 60.0% | |
TTGCCGCTGGCGGGAAAACA+TGG | + | chr5_1:15581975-15581994 | Msa0719910:intron | 60.0% | |
TGCCGCTGGCGGGAAAACAT+GGG | + | chr5_1:15581976-15581995 | Msa0719910:intron | 60.0% | |
GGCCTTCGATTACCACCACC+AGG | + | chr5_1:15582332-15582351 | Msa0719910:CDS | 60.0% | |
CACAGTTCCGTCGTTGTCGG+TGG | - | chr5_1:15582673-15582692 | None:intergenic | 60.0% | |
GGTGCCTGGGGAAATCTGAG+AGG | + | chr5_1:15584762-15584781 | Msa0719910:CDS | 60.0% | |
TTGCGCCCCGCATCAAGAGT+GGG | + | chr5_1:15585208-15585227 | Msa0719910:CDS | 60.0% | |
AGCGCTCCCACTCTTGATGC+GGG | - | chr5_1:15585217-15585236 | None:intergenic | 60.0% | |
!! | AAGAGTGGGAGCGCTACACC+AGG | + | chr5_1:15585222-15585241 | Msa0719910:CDS | 60.0% |
CGCTACACCAGGCTTCTCAG+CGG | + | chr5_1:15585233-15585252 | Msa0719910:CDS | 60.0% | |
GCTACACCAGGCTTCTCAGC+GGG | + | chr5_1:15585234-15585253 | Msa0719910:CDS | 60.0% | |
ACCAGGCTTCTCAGCGGGAA+TGG | + | chr5_1:15585239-15585258 | Msa0719910:CDS | 60.0% | |
!! | ACAAGGGCCGCTCTGGAAGA+GGG | + | chr5_1:15585291-15585310 | Msa0719910:CDS | 60.0% |
CCGCACAGAACGAGCAGATC+TGG | - | chr5_1:15585402-15585421 | None:intergenic | 60.0% | |
!! | GTGCGGCTGCTTGTTGTCTG+TGG | + | chr5_1:15585416-15585435 | Msa0719910:CDS | 60.0% |
AAAGAATCGTGGGGGTGGGG+GGG | - | chr5_1:15585609-15585628 | None:intergenic | 60.0% | |
CCGGATTTGCCCATCTGGAC+AGG | + | chr5_1:15585643-15585662 | Msa0719910:intron | 60.0% | |
!!! | CAGGGGTTTTGGAGAGTGCC+TGG | - | chr5_1:15588838-15588857 | None:intergenic | 60.0% |
CAGGCACTCTCCAAAACCCC+TGG | + | chr5_1:15588836-15588855 | Msa0719910:intron | 60.0% | |
TCCCTCCGTACAGCAGAAGC+AGG | + | chr5_1:15588974-15588993 | Msa0719910:CDS | 60.0% | |
CCCTGCTTCTGCTGTACGGA+GGG | - | chr5_1:15588978-15588997 | None:intergenic | 60.0% | |
CCCTCCGTACAGCAGAAGCA+GGG | + | chr5_1:15588975-15588994 | Msa0719910:CDS | 60.0% | |
TCCCTGCTTCTGCTGTACGG+AGG | - | chr5_1:15588979-15588998 | None:intergenic | 60.0% | |
AGCAGGGACAGCACTCTCAC+CGG | + | chr5_1:15588991-15589010 | Msa0719910:CDS | 60.0% | |
GAGGCAGGGTCCAATTGGCA+CGG | + | chr5_1:15589209-15589228 | Msa0719910:CDS | 60.0% | |
GCCGCTGGCGGGAAAACATG+GGG | + | chr5_1:15581977-15581996 | Msa0719910:intron | 65.0% | |
! | GCCCCATGTTTTCCCGCCAG+CGG | - | chr5_1:15581981-15582000 | None:intergenic | 65.0% |
GTCGTTGACCTCCCTGGTGG+TGG | - | chr5_1:15582347-15582366 | None:intergenic | 65.0% | |
CTCGTCGTTGACCTCCCTGG+TGG | - | chr5_1:15582350-15582369 | None:intergenic | 65.0% | |
CTCTTGATGCGGGGCGCAAC+TGG | - | chr5_1:15585207-15585226 | None:intergenic | 65.0% | |
GTTGCGCCCCGCATCAAGAG+TGG | + | chr5_1:15585207-15585226 | Msa0719910:CDS | 65.0% | |
GCGCTCCCACTCTTGATGCG+GGG | - | chr5_1:15585216-15585235 | None:intergenic | 65.0% | |
GCCATTCCCGCTGAGAAGCC+TGG | - | chr5_1:15585243-15585262 | None:intergenic | 65.0% | |
!! | CACAAGGGCCGCTCTGGAAG+AGG | + | chr5_1:15585290-15585309 | Msa0719910:CDS | 65.0% |
!! | CAAGGGCCGCTCTGGAAGAG+GGG | + | chr5_1:15585292-15585311 | Msa0719910:CDS | 65.0% |
GCGGCGCAACGGAGTGATCG+TGG | - | chr5_1:15585158-15585177 | None:intergenic | 70.0% | |
CGATCACTCCGTTGCGCCGC+AGG | + | chr5_1:15585158-15585177 | Msa0719910:CDS | 70.0% | |
TCCGTTGCGCCGCAGGACAG+TGG | + | chr5_1:15585165-15585184 | Msa0719910:CDS | 70.0% | |
GCCACTGTCCTGCGGCGCAA+CGG | - | chr5_1:15585169-15585188 | None:intergenic | 70.0% | |
TTGCGCCGCAGGACAGTGGC+TGG | + | chr5_1:15585169-15585188 | Msa0719910:CDS | 70.0% | |
! | GGCGCAACTGGCTTCACCGG+CGG | - | chr5_1:15585195-15585214 | None:intergenic | 70.0% |
! | CGGGGCGCAACTGGCTTCAC+CGG | - | chr5_1:15585198-15585217 | None:intergenic | 70.0% |
TGCGCCCATAGCGGCGCACA+AGG | + | chr5_1:15585274-15585293 | Msa0719910:CDS | 70.0% | |
GCGCCCATAGCGGCGCACAA+GGG | + | chr5_1:15585275-15585294 | Msa0719910:CDS | 70.0% | |
CGGCCCTTGTGCGCCGCTAT+GGG | - | chr5_1:15585281-15585300 | None:intergenic | 70.0% | |
GGCGGCCAGCCACTGTCCTG+CGG | - | chr5_1:15585177-15585196 | None:intergenic | 75.0% | |
! | GCAGGACAGTGGCTGGCCGC+CGG | + | chr5_1:15585176-15585195 | Msa0719910:CDS | 75.0% |
GCGGCCCTTGTGCGCCGCTA+TGG | - | chr5_1:15585282-15585301 | None:intergenic | 75.0% | |
! | GCGGCGCACAAGGGCCGCTC+TGG | + | chr5_1:15585284-15585303 | Msa0719910:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 15580998 | 15589770 | 15580998 | ID=Msa0719910;Name=Msa0719910 |
chr5_1 | mRNA | 15580998 | 15589770 | 15580998 | ID=Msa0719910-mRNA-1;Parent=Msa0719910;Name=Msa0719910-mRNA-1;_AED=0.11;_eAED=0.13;_QI=225|0.58|0.69|0.92|1|1|13|274|1008 |
chr5_1 | exon | 15580998 | 15581542 | 15580998 | ID=Msa0719910-mRNA-1:exon:5987;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15582279 | 15582418 | 15582279 | ID=Msa0719910-mRNA-1:exon:5988;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15582505 | 15583196 | 15582505 | ID=Msa0719910-mRNA-1:exon:5989;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15583521 | 15583609 | 15583521 | ID=Msa0719910-mRNA-1:exon:5990;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15584069 | 15584141 | 15584069 | ID=Msa0719910-mRNA-1:exon:5991;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15584277 | 15584389 | 15584277 | ID=Msa0719910-mRNA-1:exon:5992;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15584504 | 15584618 | 15584504 | ID=Msa0719910-mRNA-1:exon:5993;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15584749 | 15584906 | 15584749 | ID=Msa0719910-mRNA-1:exon:5994;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15585142 | 15585450 | 15585142 | ID=Msa0719910-mRNA-1:exon:5995;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15587555 | 15587639 | 15587555 | ID=Msa0719910-mRNA-1:exon:5996;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15587752 | 15587964 | 15587752 | ID=Msa0719910-mRNA-1:exon:5997;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15588663 | 15588724 | 15588663 | ID=Msa0719910-mRNA-1:exon:5998;Parent=Msa0719910-mRNA-1 |
chr5_1 | exon | 15588839 | 15589770 | 15588839 | ID=Msa0719910-mRNA-1:exon:5999;Parent=Msa0719910-mRNA-1 |
chr5_1 | five_prime_UTR | 15580998 | 15581222 | 15580998 | ID=Msa0719910-mRNA-1:five_prime_utr;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15581223 | 15581542 | 15581223 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15582279 | 15582418 | 15582279 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15582505 | 15583196 | 15582505 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15583521 | 15583609 | 15583521 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15584069 | 15584141 | 15584069 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15584277 | 15584389 | 15584277 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15584504 | 15584618 | 15584504 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15584749 | 15584906 | 15584749 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15585142 | 15585450 | 15585142 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15587555 | 15587639 | 15587555 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15587752 | 15587964 | 15587752 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15588663 | 15588724 | 15588663 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | CDS | 15588839 | 15589496 | 15588839 | ID=Msa0719910-mRNA-1:cds;Parent=Msa0719910-mRNA-1 |
chr5_1 | three_prime_UTR | 15589497 | 15589770 | 15589497 | ID=Msa0719910-mRNA-1:three_prime_utr;Parent=Msa0719910-mRNA-1 |
Gene Sequence |
Protein sequence |