Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0847930 | GAU23336.1 | 73.431 | 1020 | 174 | 14 | 39 | 1008 | 1 | 973 | 0.0 | 1350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0847930 | sp|Q9FKP5|UBP17_ARATH | 37.960 | 598 | 237 | 20 | 17 | 567 | 1 | 511 | 1.57e-86 | 297 |
Msa0847930 | sp|Q9FKP5|UBP17_ARATH | 46.400 | 250 | 91 | 6 | 671 | 919 | 512 | 719 | 1.36e-49 | 191 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0847930 | A0A2Z6LWE3 | 73.431 | 1020 | 174 | 14 | 39 | 1008 | 1 | 973 | 0.0 | 1350 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0101810 | Msa0847930 | -0.801283 | 9.687212e-49 | -8.615850e-47 |
Msa0719910 | Msa0847930 | 0.977311 | 1.580892e-143 | -8.615850e-47 |
Msa0804680 | Msa0847930 | 0.911928 | 3.485388e-83 | -8.615850e-47 |
Msa0847930 | Msa1008490 | 0.825572 | 4.358280e-54 | -8.615850e-47 |
Msa0847930 | Msa1098560 | 0.812009 | 5.258458e-51 | -8.615850e-47 |
Msa0847930 | Msa1240310 | 0.822580 | 2.195009e-53 | -8.615850e-47 |
Msa0847930 | Msa1240330 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
Msa0847930 | Msa1320740 | 0.810098 | 1.364798e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0847930 | MtrunA17_Chr5g0412381 | 85.878 | 609 | 41 | 5 | 1 | 567 | 1 | 606 | 0.0 | 966 |
Msa0847930 | MtrunA17_Chr5g0412381 | 97.929 | 338 | 6 | 1 | 671 | 1008 | 607 | 943 | 0.0 | 629 |
Msa0847930 | MtrunA17_Chr3g0133061 | 52.326 | 258 | 91 | 5 | 671 | 919 | 769 | 1003 | 1.18e-60 | 226 |
Msa0847930 | MtrunA17_Chr3g0133061 | 55.769 | 208 | 61 | 5 | 387 | 567 | 565 | 768 | 6.14e-57 | 214 |
Msa0847930 | MtrunA17_Chr3g0133061 | 36.879 | 141 | 66 | 4 | 19 | 159 | 24 | 141 | 1.47e-17 | 88.6 |
Msa0847930 | MtrunA17_Chr5g0427301 | 56.098 | 205 | 65 | 5 | 387 | 567 | 523 | 726 | 3.16e-59 | 221 |
Msa0847930 | MtrunA17_Chr5g0427301 | 45.122 | 246 | 117 | 5 | 671 | 913 | 727 | 957 | 3.83e-49 | 189 |
Msa0847930 | MtrunA17_Chr5g0427301 | 39.877 | 163 | 72 | 6 | 1 | 139 | 1 | 161 | 4.33e-23 | 106 |
Msa0847930 | MtrunA17_Chr2g0313171 | 45.059 | 253 | 120 | 6 | 671 | 909 | 650 | 897 | 1.71e-53 | 202 |
Msa0847930 | MtrunA17_Chr2g0313171 | 44.019 | 209 | 91 | 4 | 384 | 567 | 442 | 649 | 1.54e-39 | 159 |
Msa0847930 | MtrunA17_Chr2g0313171 | 34.906 | 106 | 53 | 2 | 28 | 126 | 30 | 126 | 1.08e-12 | 72.4 |
Msa0847930 | MtrunA17_Chr1g0150541 | 56.667 | 150 | 64 | 1 | 671 | 820 | 367 | 515 | 1.29e-46 | 180 |
Msa0847930 | MtrunA17_Chr1g0150541 | 35.154 | 293 | 118 | 10 | 387 | 641 | 162 | 420 | 6.06e-37 | 150 |
Msa0847930 | MtrunA17_Chr2g0312901 | 42.424 | 132 | 72 | 3 | 671 | 801 | 210 | 338 | 1.43e-21 | 100 |
Msa0847930 | MtrunA17_Chr2g0312901 | 27.660 | 188 | 108 | 5 | 405 | 565 | 21 | 207 | 3.79e-13 | 73.6 |
Msa0847930 | MtrunA17_Chr4g0074041 | 42.975 | 121 | 66 | 2 | 671 | 790 | 277 | 395 | 2.97e-20 | 97.1 |
Msa0847930 | MtrunA17_Chr4g0074041 | 36.585 | 123 | 75 | 3 | 447 | 567 | 155 | 276 | 3.21e-15 | 80.5 |
Msa0847930 | MtrunA17_Chr6g0458421 | 43.902 | 123 | 64 | 4 | 671 | 791 | 209 | 328 | 1.33e-18 | 90.9 |
Msa0847930 | MtrunA17_Chr6g0458421 | 31.933 | 119 | 77 | 3 | 447 | 565 | 92 | 206 | 3.46e-11 | 67.0 |
Msa0847930 | MtrunA17_Chr6g0458431 | 43.089 | 123 | 65 | 4 | 671 | 791 | 274 | 393 | 1.51e-17 | 87.8 |
Msa0847930 | MtrunA17_Chr2g0322211 | 40.000 | 125 | 69 | 3 | 671 | 792 | 742 | 863 | 4.06e-17 | 86.7 |
Msa0847930 | MtrunA17_Chr5g0411271 | 40.476 | 126 | 68 | 4 | 671 | 791 | 327 | 450 | 4.32e-17 | 86.7 |
Msa0847930 | MtrunA17_Chr6g0458441 | 42.276 | 123 | 66 | 4 | 671 | 791 | 307 | 426 | 5.78e-17 | 85.9 |
Msa0847930 | MtrunA17_Chr6g0458441 | 32.773 | 119 | 76 | 3 | 447 | 565 | 190 | 304 | 3.08e-11 | 67.4 |
Msa0847930 | MtrunA17_Chr4g0062561 | 41.463 | 123 | 67 | 3 | 669 | 790 | 422 | 540 | 5.06e-16 | 83.2 |
Msa0847930 | MtrunA17_Chr4g0062561 | 33.835 | 133 | 82 | 3 | 663 | 795 | 731 | 857 | 1.08e-12 | 72.4 |
Msa0847930 | MtrunA17_Chr4g0062491 | 32.450 | 151 | 88 | 4 | 671 | 810 | 166 | 313 | 6.53e-14 | 73.9 |
Msa0847930 | MtrunA17_Chr1g0149991 | 31.206 | 141 | 72 | 5 | 671 | 790 | 388 | 524 | 3.05e-13 | 73.6 |
Msa0847930 | MtrunA17_Chr7g0267641 | 35.075 | 134 | 78 | 5 | 671 | 798 | 816 | 946 | 1.46e-12 | 72.0 |
Msa0847930 | MtrunA17_Chr8g0366721 | 32.117 | 137 | 86 | 3 | 671 | 802 | 376 | 510 | 4.86e-12 | 69.7 |
Msa0847930 | MtrunA17_Chr4g0064671 | 28.966 | 145 | 74 | 4 | 671 | 790 | 105 | 245 | 8.20e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0847930 | AT5G65450.2 | 38.033 | 610 | 244 | 20 | 5 | 567 | 8 | 530 | 4.29e-90 | 305 |
Msa0847930 | AT5G65450.2 | 46.400 | 250 | 91 | 6 | 671 | 919 | 531 | 738 | 2.06e-50 | 191 |
Msa0847930 | AT5G65450.1 | 37.960 | 598 | 237 | 20 | 17 | 567 | 1 | 511 | 1.60e-87 | 297 |
Msa0847930 | AT5G65450.1 | 46.400 | 250 | 91 | 6 | 671 | 919 | 512 | 719 | 1.39e-50 | 191 |
Msa0847930 | AT4G24560.1 | 52.451 | 204 | 72 | 5 | 387 | 566 | 524 | 726 | 7.98e-49 | 189 |
Msa0847930 | AT4G24560.1 | 40.873 | 252 | 134 | 3 | 671 | 922 | 728 | 964 | 1.96e-47 | 184 |
Msa0847930 | AT4G24560.1 | 45.283 | 106 | 42 | 2 | 22 | 127 | 25 | 114 | 4.36e-20 | 97.1 |
Msa0847930 | AT1G17110.3 | 40.741 | 243 | 95 | 3 | 671 | 909 | 624 | 821 | 1.98e-47 | 184 |
Msa0847930 | AT1G17110.3 | 41.627 | 209 | 96 | 4 | 384 | 567 | 416 | 623 | 1.75e-37 | 152 |
Msa0847930 | AT1G17110.3 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 4.23e-14 | 77.4 |
Msa0847930 | AT1G17110.1 | 40.741 | 243 | 95 | 3 | 671 | 909 | 624 | 821 | 1.98e-47 | 184 |
Msa0847930 | AT1G17110.1 | 41.627 | 209 | 96 | 4 | 384 | 567 | 416 | 623 | 1.75e-37 | 152 |
Msa0847930 | AT1G17110.1 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 4.23e-14 | 77.4 |
Msa0847930 | AT1G17110.2 | 40.741 | 243 | 95 | 3 | 671 | 909 | 628 | 825 | 2.00e-47 | 184 |
Msa0847930 | AT1G17110.2 | 41.860 | 215 | 98 | 5 | 378 | 567 | 415 | 627 | 4.64e-37 | 151 |
Msa0847930 | AT1G17110.2 | 61.224 | 49 | 19 | 0 | 78 | 126 | 121 | 169 | 4.21e-14 | 77.4 |
Msa0847930 | AT2G24640.2 | 62.400 | 125 | 47 | 0 | 671 | 795 | 190 | 314 | 5.88e-46 | 173 |
Msa0847930 | AT2G24640.2 | 42.328 | 189 | 85 | 4 | 403 | 567 | 1 | 189 | 5.82e-36 | 144 |
Msa0847930 | AT2G24640.1 | 62.400 | 125 | 47 | 0 | 671 | 795 | 360 | 484 | 6.94e-45 | 173 |
Msa0847930 | AT2G24640.1 | 37.132 | 272 | 144 | 6 | 320 | 567 | 91 | 359 | 8.22e-42 | 164 |
Msa0847930 | AT4G31670.1 | 61.667 | 120 | 46 | 0 | 671 | 790 | 354 | 473 | 2.09e-42 | 165 |
Msa0847930 | AT4G31670.1 | 42.718 | 206 | 92 | 5 | 387 | 567 | 149 | 353 | 9.65e-41 | 160 |
Msa0847930 | AT5G57990.1 | 39.860 | 143 | 80 | 2 | 671 | 809 | 292 | 432 | 8.54e-24 | 108 |
Msa0847930 | AT5G57990.1 | 33.871 | 124 | 77 | 4 | 447 | 567 | 170 | 291 | 2.13e-12 | 72.0 |
Msa0847930 | AT3G14400.1 | 41.259 | 143 | 75 | 4 | 671 | 806 | 213 | 353 | 1.42e-21 | 101 |
Msa0847930 | AT3G14400.1 | 34.711 | 121 | 75 | 2 | 448 | 565 | 94 | 213 | 4.62e-13 | 73.9 |
Msa0847930 | AT5G46740.2 | 40.323 | 124 | 68 | 4 | 671 | 790 | 138 | 259 | 1.08e-15 | 82.0 |
Msa0847930 | AT5G46740.1 | 40.323 | 124 | 68 | 4 | 671 | 790 | 347 | 468 | 1.97e-15 | 81.6 |
Msa0847930 | AT2G32780.1 | 37.121 | 132 | 62 | 4 | 677 | 790 | 954 | 1082 | 4.11e-15 | 80.9 |
Msa0847930 | AT1G04860.1 | 39.062 | 128 | 61 | 4 | 677 | 790 | 832 | 956 | 9.98e-15 | 79.7 |
Msa0847930 | AT4G10590.4 | 37.903 | 124 | 70 | 4 | 671 | 790 | 773 | 893 | 3.85e-13 | 74.3 |
Msa0847930 | AT4G10590.3 | 37.903 | 124 | 70 | 4 | 671 | 790 | 773 | 893 | 3.85e-13 | 74.3 |
Msa0847930 | AT4G10590.1 | 37.903 | 124 | 70 | 4 | 671 | 790 | 773 | 893 | 3.85e-13 | 74.3 |
Msa0847930 | AT4G10590.2 | 37.903 | 124 | 70 | 4 | 671 | 790 | 773 | 893 | 3.85e-13 | 74.3 |
Msa0847930 | AT4G17895.1 | 34.586 | 133 | 81 | 3 | 671 | 799 | 354 | 484 | 5.08e-12 | 70.5 |
Msa0847930 | AT1G32850.1 | 34.677 | 124 | 74 | 4 | 671 | 790 | 759 | 879 | 8.69e-11 | 66.6 |
Find 236 sgRNAs with CRISPR-Local
Find 614 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTATTTGTTATTGGTTT+TGG | 0.121892 | 5_4:+32062729 | Msa0847930:CDS |
AATACGATTGTAAGAATATT+TGG | 0.152865 | 5_4:-32069075 | None:intergenic |
ATTTACAGCGCCTGAAATTT+TGG | 0.163683 | 5_4:+32066327 | Msa0847930:CDS |
AGGTTTGGTTTATTTGTTAT+TGG | 0.215145 | 5_4:+32062723 | Msa0847930:CDS |
CTTACTGAACCCAGGGGTTT+TGG | 0.224633 | 5_4:-32070317 | None:intergenic |
TTATCTTTATCCAAAATTTC+AGG | 0.225753 | 5_4:-32066337 | None:intergenic |
CAGTATTGTCAACTTCTTCT+TGG | 0.226243 | 5_4:-32069046 | None:intergenic |
CACTTAGAAGTGTCTGTTAT+TGG | 0.226390 | 5_4:-32064380 | None:intergenic |
CTCTTGATGCGGGGCGCAAC+TGG | 0.242808 | 5_4:-32066675 | None:intergenic |
GTTATCCTATAAGGGCAAAA+TGG | 0.243437 | 5_4:-32062590 | None:intergenic |
TAGTTGAATCTCCATTCTTC+TGG | 0.247696 | 5_4:-32070524 | None:intergenic |
ACTCTCATTGGATACACTTT+TGG | 0.259420 | 5_4:+32066048 | Msa0847930:CDS |
AGCAAAAGGGTTATCCTATA+AGG | 0.274951 | 5_4:-32062599 | None:intergenic |
AATCGTATTAAAACGATTTC+AGG | 0.276311 | 5_4:+32069089 | Msa0847930:CDS |
ACAAGATACTACTGCTTCTA+TGG | 0.281969 | 5_4:+32062819 | Msa0847930:CDS |
CTTTATCTTCCGAGTCTTGC+TGG | 0.282680 | 5_4:-32070796 | None:intergenic |
AACTCAGATTTGGCCATAAA+AGG | 0.294284 | 5_4:-32066818 | None:intergenic |
GCGGCCCTTGTGCGCCGCTA+TGG | 0.299287 | 5_4:-32066750 | None:intergenic |
CACAAGGGCCGCTCTGGAAG+AGG | 0.313592 | 5_4:+32066761 | Msa0847930:CDS |
TATGTGTCGGATTTAGCTTT+TGG | 0.327935 | 5_4:-32064293 | None:intergenic |
GGAACAGAATTTGGTCTTCA+TGG | 0.328708 | 5_4:+32063868 | Msa0847930:CDS |
TCAGTATCAGGAACAGAATT+TGG | 0.328828 | 5_4:+32063859 | Msa0847930:CDS |
ACTGCATAAAGACTGTAAAA+TGG | 0.330409 | 5_4:-32069313 | None:intergenic |
GTTGCACTCCTCATTTCCTT+TGG | 0.334119 | 5_4:+32064163 | Msa0847930:CDS |
TCCAATTGGCACGGCCAGTA+TGG | 0.345562 | 5_4:+32070689 | Msa0847930:CDS |
TCCTTTCTTCCACTCATGTA+TGG | 0.349135 | 5_4:-32069283 | None:intergenic |
TGATGGAGATATTGAAACTT+TGG | 0.357074 | 5_4:+32066288 | Msa0847930:CDS |
ACATCTAGGGCATCAGTATC+AGG | 0.357745 | 5_4:+32063847 | Msa0847930:CDS |
TACTGCTTCTATGGCTCATA+TGG | 0.359546 | 5_4:+32062828 | Msa0847930:CDS |
CGGCCCTTGTGCGCCGCTAT+GGG | 0.362379 | 5_4:-32066749 | None:intergenic |
ACTTCTCCACTTTCTCCAAT+TGG | 0.366435 | 5_4:+32065763 | Msa0847930:CDS |
GTTGCCGGAAAACTCAGATT+TGG | 0.366660 | 5_4:-32066828 | None:intergenic |
CTTGAACTTTCCAGTTGAAA+AGG | 0.367423 | 5_4:-32070351 | None:intergenic |
GGAGTCATATCCAGGACTTC+AGG | 0.367763 | 5_4:-32069262 | None:intergenic |
TGGAGGATATCTACGATCTA+AGG | 0.370301 | 5_4:+32066068 | Msa0847930:CDS |
AAGAATTCTTGCGCTAATAC+TGG | 0.375874 | 5_4:-32071066 | None:intergenic |
CACAAGATTGGAAGTCATCT+TGG | 0.379158 | 5_4:+32065802 | Msa0847930:CDS |
TTGAAATCTTCTTCTTATCC+TGG | 0.382747 | 5_4:-32062669 | None:intergenic |
ACCTGTTCCCACAGTTTGTA+AGG | 0.383832 | 5_4:-32065060 | None:intergenic |
TTATGCAGTGGTCGTCCATT+TGG | 0.385617 | 5_4:+32069327 | Msa0847930:CDS |
TCCATACTGGCCGTGCCAAT+TGG | 0.396800 | 5_4:-32070690 | None:intergenic |
GCGGCGCACAAGGGCCGCTC+TGG | 0.398177 | 5_4:+32066755 | Msa0847930:CDS |
GATCTTACTGTTGAGATTGA+TGG | 0.398304 | 5_4:+32066271 | Msa0847930:CDS |
GCCTTACAAACTGTGGGAAC+AGG | 0.403690 | 5_4:+32065059 | Msa0847930:CDS |
CTTCTCCACTTTCTCCAATT+GGG | 0.405205 | 5_4:+32065764 | Msa0847930:CDS |
AGAAGAGAGAAGAGGTTATG+AGG | 0.406519 | 5_4:+32062791 | Msa0847930:CDS |
TGCAAAAGATATGATGTTAG+AGG | 0.410696 | 5_4:-32065566 | None:intergenic |
AGGAATCATCAACGGCATTC+CGG | 0.411036 | 5_4:-32070481 | None:intergenic |
TTGTGGTGATTCGTTATGTT+TGG | 0.412049 | 5_4:+32062755 | Msa0847930:CDS |
ACAGAAGAAACAACTCTCAT+TGG | 0.412098 | 5_4:+32066036 | Msa0847930:CDS |
GCAAAAGGGTTATCCTATAA+GGG | 0.414040 | 5_4:-32062598 | None:intergenic |
GAGAGAAGAGGTTATGAGGT+TGG | 0.414269 | 5_4:+32062795 | Msa0847930:CDS |
CCGCACAGAACGAGCAGATC+TGG | 0.415871 | 5_4:-32066870 | None:intergenic |
TTTCACTAATATAAGTAGAA+TGG | 0.418206 | 5_4:+32071025 | Msa0847930:three_prime_UTR |
TTGAGATAGAATCAAACATC+TGG | 0.424071 | 5_4:+32070975 | Msa0847930:three_prime_UTR |
CGGGGCGCAACTGGCTTCAC+CGG | 0.424750 | 5_4:-32066666 | None:intergenic |
GCTGCAAAGCTGTTAGATAC+TGG | 0.425233 | 5_4:+32062992 | Msa0847930:CDS |
ACATTCAAGGAGAATGGTTC+AGG | 0.428022 | 5_4:+32069398 | Msa0847930:CDS |
GTTCCTGTTTCAGTTTCTCA+TGG | 0.428479 | 5_4:+32062922 | Msa0847930:CDS |
CTTCAACAAAATGTTCGTAA+TGG | 0.428992 | 5_4:+32064623 | Msa0847930:CDS |
CTATCGGGGAAGAAATACTA+TGG | 0.429666 | 5_4:+32070544 | Msa0847930:CDS |
ATGGCTCATATGGAAGCTTA+TGG | 0.432782 | 5_4:+32062838 | Msa0847930:CDS |
GAAAGAAAGATATTTGTTGC+CGG | 0.432861 | 5_4:-32066843 | None:intergenic |
CAAGAAGAAGTTGACAATAC+TGG | 0.433670 | 5_4:+32069047 | Msa0847930:CDS |
AATGCCGTTGATGATTCCTT+TGG | 0.438331 | 5_4:+32070485 | Msa0847930:CDS |
TTCACTAATATAAGTAGAAT+GGG | 0.439685 | 5_4:+32071026 | Msa0847930:three_prime_UTR |
ATCTTAGATAATATCCCAAT+TGG | 0.440970 | 5_4:-32065778 | None:intergenic |
ATCTGTATGCAAGGTATCAT+AGG | 0.441162 | 5_4:-32070741 | None:intergenic |
CGAGCACAACGCATGGTAGT+AGG | 0.445877 | 5_4:-32062970 | None:intergenic |
GATAAAGTGCTTAAGGTGCC+TGG | 0.447779 | 5_4:+32066219 | Msa0847930:intron |
AAGGTGAAACTATTTCCCTT+TGG | 0.448054 | 5_4:+32065037 | Msa0847930:CDS |
CAGGCACTCTCCAAAACCCC+TGG | 0.448154 | 5_4:+32070307 | Msa0847930:intron |
TTATCCTATAAGGGCAAAAT+GGG | 0.448963 | 5_4:-32062589 | None:intergenic |
GAAACTTTGGAGGAGGCTCT+TGG | 0.449157 | 5_4:+32066301 | Msa0847930:CDS |
TTGCGCCGCAGGACAGTGGC+TGG | 0.452127 | 5_4:+32066640 | Msa0847930:CDS |
TTGGTGAGGCAGGGTCCAAT+TGG | 0.452714 | 5_4:+32070675 | Msa0847930:CDS |
AGCGCTCCCACTCTTGATGC+GGG | 0.453292 | 5_4:-32066685 | None:intergenic |
AGAATTCTTGTGTACAAGTA+AGG | 0.454753 | 5_4:+32071080 | Msa0847930:three_prime_UTR |
AAATGCAGATAAAGTGCTTA+AGG | 0.454777 | 5_4:+32066212 | Msa0847930:intron |
TCAAATATCTTCAACTACTA+AGG | 0.458919 | 5_4:+32064520 | Msa0847930:CDS |
GAGTCATATCCAGGACTTCA+GGG | 0.463677 | 5_4:-32069261 | None:intergenic |
CGATCACTCCGTTGCGCCGC+AGG | 0.465202 | 5_4:+32066629 | Msa0847930:CDS |
TTCTTAACTTCAATATTGAC+AGG | 0.465879 | 5_4:-32064197 | None:intergenic |
TCTTCACATAGCAAACATAA+TGG | 0.467180 | 5_4:-32069375 | None:intergenic |
AATATCCCAATTGGAGAAAG+TGG | 0.468182 | 5_4:-32065769 | None:intergenic |
TCATGATGAGGCATCAAAGT+TGG | 0.471953 | 5_4:+32064316 | Msa0847930:CDS |
TGCTATGTGAAGAACATTCA+AGG | 0.474890 | 5_4:+32069385 | Msa0847930:CDS |
TCCCTCCGTACAGCAGAAGC+AGG | 0.476218 | 5_4:+32070445 | Msa0847930:CDS |
TTTAGATTCCAAAGGAAATG+AGG | 0.478331 | 5_4:-32064171 | None:intergenic |
ATAGAAAATGAACATAAAAC+AGG | 0.478670 | 5_4:-32071214 | None:intergenic |
AGAGTTGTTTCTTCTGTCAA+AGG | 0.480437 | 5_4:-32066030 | None:intergenic |
CTAATTCAGAAGGCAAAAGA+AGG | 0.480521 | 5_4:+32065739 | Msa0847930:intron |
AGAATGGAGATTCAACTATC+GGG | 0.481143 | 5_4:+32070529 | Msa0847930:CDS |
GCCACTGTCCTGCGGCGCAA+CGG | 0.481600 | 5_4:-32066637 | None:intergenic |
TCAAAAGAGGCTGAATTTGA+AGG | 0.484734 | 5_4:-32062886 | None:intergenic |
TGGATCCTGTGTTGGGGACC+AGG | 0.484738 | 5_4:+32062651 | Msa0847930:five_prime_UTR |
CATGATGAGGCATCAAAGTT+GGG | 0.487207 | 5_4:+32064317 | Msa0847930:CDS |
ACCAGGCTTCTCAGCGGGAA+TGG | 0.487378 | 5_4:+32066710 | Msa0847930:CDS |
TACCCATGAGAAACTGAAAC+AGG | 0.487847 | 5_4:-32062925 | None:intergenic |
AGTTCAGTTCCCTGAAGTCC+TGG | 0.488513 | 5_4:+32069252 | Msa0847930:CDS |
GGAAGAAGATGCAGCCGAGT+TGG | 0.490012 | 5_4:-32070720 | None:intergenic |
TCTCCGTGCTTCTTTGTACC+TGG | 0.491522 | 5_4:-32064474 | None:intergenic |
AGTTCCACGAAAAGTTCATA+AGG | 0.491793 | 5_4:-32065001 | None:intergenic |
GCCATTCCCGCTGAGAAGCC+TGG | 0.491944 | 5_4:-32066711 | None:intergenic |
CAGTGGACAATGATGCTGAT+AGG | 0.494139 | 5_4:+32070768 | Msa0847930:CDS |
ACAAGGGCCGCTCTGGAAGA+GGG | 0.498771 | 5_4:+32066762 | Msa0847930:CDS |
ATAATAAGTATAATTGTGGC+AGG | 0.498980 | 5_4:+32066356 | Msa0847930:CDS |
GCAGGACAGTGGCTGGCCGC+CGG | 0.499004 | 5_4:+32066647 | Msa0847930:CDS |
ACGACGAGAATGTTACATCT+AGG | 0.499991 | 5_4:+32063833 | Msa0847930:CDS |
AATCTGTATACCCAGAAGAA+TGG | 0.500875 | 5_4:+32070513 | Msa0847930:CDS |
TGGAGATATTGAAACTTTGG+AGG | 0.501477 | 5_4:+32066291 | Msa0847930:CDS |
CGAATTCAATGATTCAAAAG+AGG | 0.502614 | 5_4:-32062899 | None:intergenic |
GGCGCAACTGGCTTCACCGG+CGG | 0.503356 | 5_4:-32066663 | None:intergenic |
TCATGTATGGAGTCATATCC+AGG | 0.504692 | 5_4:-32069270 | None:intergenic |
AGTTGAATCTCCATTCTTCT+GGG | 0.506322 | 5_4:-32070523 | None:intergenic |
TTCCTGTTTCAGTTTCTCAT+GGG | 0.506577 | 5_4:+32062923 | Msa0847930:CDS |
AAGAATGGAGATTCAACTAT+CGG | 0.508547 | 5_4:+32070528 | Msa0847930:CDS |
CCACAGTTTGTAAGGCCAAA+GGG | 0.509994 | 5_4:-32065052 | None:intergenic |
TTATCTAAGATACACAAGAT+TGG | 0.510095 | 5_4:+32065790 | Msa0847930:CDS |
ATAAAGTGCTTAAGGTGCCT+GGG | 0.510769 | 5_4:+32066220 | Msa0847930:CDS |
CCCTGCTTCTGCTGTACGGA+GGG | 0.511074 | 5_4:-32070446 | None:intergenic |
CCCTTTGGCCTTACAAACTG+TGG | 0.511138 | 5_4:+32065052 | Msa0847930:CDS |
TAATGCAGCACTCCAATGCT+TGG | 0.511611 | 5_4:+32065532 | Msa0847930:intron |
TGAAGAACATTCAAGGAGAA+TGG | 0.514909 | 5_4:+32069392 | Msa0847930:CDS |
TCCATACATGAGTGGAAGAA+AGG | 0.515325 | 5_4:+32069282 | Msa0847930:CDS |
GTCGTTGACCTCCCTGGTGG+TGG | 0.517256 | 5_4:-32063815 | None:intergenic |
AAGCATTCATGATATCCAAA+TGG | 0.518832 | 5_4:-32069342 | None:intergenic |
GGTTCAGGACTGATGACAGC+AGG | 0.519650 | 5_4:+32069413 | Msa0847930:CDS |
CTTATCCTGGTCCCCAACAC+AGG | 0.521921 | 5_4:-32062656 | None:intergenic |
GCTGAGTATACGCCAAGCAT+TGG | 0.523037 | 5_4:-32065544 | None:intergenic |
AAAGGAAATCATGTTAATGT+TGG | 0.523088 | 5_4:+32063981 | Msa0847930:CDS |
CCTTTGGCCTTACAAACTGT+GGG | 0.525061 | 5_4:+32065053 | Msa0847930:CDS |
TGCGCCCATAGCGGCGCACA+AGG | 0.526910 | 5_4:+32066745 | Msa0847930:CDS |
ATTCTCGTCGTTGACCTCCC+TGG | 0.528198 | 5_4:-32063821 | None:intergenic |
TGGAAGAATCGCATTTGTCC+AGG | 0.528424 | 5_4:+32064456 | Msa0847930:CDS |
CGTCTTAGAAACAGCAGGAA+TGG | 0.529122 | 5_4:-32070390 | None:intergenic |
TTGGAAGTCATCTTGGACAT+GGG | 0.529236 | 5_4:+32065809 | Msa0847930:CDS |
CTGTCCCTGCTTCTGCTGTA+CGG | 0.530138 | 5_4:-32070450 | None:intergenic |
CAAGCTTCAGTTTCTAGTGA+CGG | 0.533804 | 5_4:+32062512 | Msa0847930:five_prime_UTR |
AAAGTTCAAGAGGAGAAGCT+TGG | 0.534645 | 5_4:+32070364 | Msa0847930:CDS |
GCTACACCAGGCTTCTCAGC+GGG | 0.535450 | 5_4:+32066705 | Msa0847930:CDS |
AAAGATAATAAGTATAATTG+TGG | 0.535772 | 5_4:+32066352 | Msa0847930:CDS |
GTTGCGCCCCGCATCAAGAG+TGG | 0.540791 | 5_4:+32066678 | Msa0847930:CDS |
CACTGAGAAATCTGTATGCA+AGG | 0.542434 | 5_4:-32070750 | None:intergenic |
TTAGCAGTATTATCACTGAC+AGG | 0.543034 | 5_4:-32064101 | None:intergenic |
AAGACTCTTGACAATTCGAC+AGG | 0.543718 | 5_4:-32070140 | None:intergenic |
TAGCGCTCCCACTCTTGATG+CGG | 0.544271 | 5_4:-32066686 | None:intergenic |
AGAATCAGCATTTGTAGCCA+TGG | 0.544421 | 5_4:-32070423 | None:intergenic |
TCCGTTGCGCCGCAGGACAG+TGG | 0.545397 | 5_4:+32066636 | Msa0847930:CDS |
ATCAGTATTTGAATTACTCA+AGG | 0.546719 | 5_4:-32064417 | None:intergenic |
CGACGAGAATGTTACATCTA+GGG | 0.549584 | 5_4:+32063834 | Msa0847930:CDS |
AGTTGGAAGAAATTCCATAC+TGG | 0.550381 | 5_4:-32070703 | None:intergenic |
CGTCACTAGAAACTGAAGCT+TGG | 0.550491 | 5_4:-32062511 | None:intergenic |
GTAAGTGTCAAATTAGTCAC+TGG | 0.552713 | 5_4:+32063755 | Msa0847930:CDS |
GTGCGGCTGCTTGTTGTCTG+TGG | 0.555408 | 5_4:+32066887 | Msa0847930:CDS |
CACAGTTCCGTCGTTGTCGG+TGG | 0.555570 | 5_4:-32064141 | None:intergenic |
GGTACTTGCATCGTTTCGAA+TGG | 0.557171 | 5_4:-32065595 | None:intergenic |
CAACACAGTTCCGTCGTTGT+CGG | 0.557421 | 5_4:-32064144 | None:intergenic |
TGCTGAAGAGAAGAGAGAAG+AGG | 0.557595 | 5_4:+32062783 | Msa0847930:CDS |
AGCAGGGACAGCACTCTCAC+CGG | 0.559255 | 5_4:+32070462 | Msa0847930:CDS |
CCCACAGTTTGTAAGGCCAA+AGG | 0.560807 | 5_4:-32065053 | None:intergenic |
TAAGACGCGGTCGAATTCCA+TGG | 0.561132 | 5_4:+32070406 | Msa0847930:CDS |
GGCCTTCGATTACCACCACC+AGG | 0.562640 | 5_4:+32063803 | Msa0847930:CDS |
CATACATGCTTCTTTATGCA+AGG | 0.567312 | 5_4:+32070174 | Msa0847930:CDS |
ATTGCTACTTACTGAACCCA+GGG | 0.567598 | 5_4:-32070324 | None:intergenic |
TAACAGACACTTCTAAGTGC+AGG | 0.568492 | 5_4:+32064384 | Msa0847930:CDS |
CAAATTAGTCACTGGAGACA+AGG | 0.573340 | 5_4:+32063763 | Msa0847930:CDS |
TGAGAGGTATGAGAGAATGA+TGG | 0.574311 | 5_4:+32066249 | Msa0847930:CDS |
TTTCCTCGCATAGAGCAAAA+GGG | 0.575633 | 5_4:-32062612 | None:intergenic |
TATGCAATATATTTGTCTCA+AGG | 0.576773 | 5_4:+32065990 | Msa0847930:CDS |
CAAGGGCCGCTCTGGAAGAG+GGG | 0.576987 | 5_4:+32066763 | Msa0847930:CDS |
TTTCAACTGGAAAGTTCAAG+AGG | 0.577233 | 5_4:+32070354 | Msa0847930:CDS |
AGCAACAGAAGCATTAATGC+TGG | 0.579662 | 5_4:-32064024 | None:intergenic |
AGATATTGAAACTTTGGAGG+AGG | 0.580830 | 5_4:+32066294 | Msa0847930:CDS |
AGCAACACTACTGATGAGAC+TGG | 0.581283 | 5_4:+32064254 | Msa0847930:CDS |
CATTGCTACTTACTGAACCC+AGG | 0.583614 | 5_4:-32070325 | None:intergenic |
GTATTTGAATTACTCAAGGA+AGG | 0.584094 | 5_4:-32064413 | None:intergenic |
TATATTTGTCTCAAGGAAGC+CGG | 0.584421 | 5_4:+32065997 | Msa0847930:CDS |
AAGAGTGGGAGCGCTACACC+AGG | 0.585022 | 5_4:+32066693 | Msa0847930:CDS |
TTTCCGTGGATCCTGTGTTG+GGG | 0.586679 | 5_4:+32062645 | Msa0847930:five_prime_UTR |
GACCGCGTCTTAGAAACAGC+AGG | 0.590979 | 5_4:-32070395 | None:intergenic |
TGTCAAAGGACTTGATAGAC+CGG | 0.591889 | 5_4:-32066016 | None:intergenic |
TCCCTGGTGGTGGTAATCGA+AGG | 0.592630 | 5_4:-32063805 | None:intergenic |
CATACCTCTCAGATTTCCCC+AGG | 0.592897 | 5_4:-32066237 | None:intergenic |
GAGGCAGGGTCCAATTGGCA+CGG | 0.593462 | 5_4:+32070680 | Msa0847930:CDS |
ATTGGAAGTCATCTTGGACA+TGG | 0.593636 | 5_4:+32065808 | Msa0847930:CDS |
TCATCTTGGACATGGGAGAG+AGG | 0.596485 | 5_4:+32065816 | Msa0847930:CDS |
TAGGAGGCTCCAGCAAGACT+CGG | 0.596936 | 5_4:+32070787 | Msa0847930:CDS |
TAAGAAGAAGATTTCAACAA+TGG | 0.597011 | 5_4:+32062675 | Msa0847930:exon |
TGTGCAGTTTGCGCCCATAG+CGG | 0.600236 | 5_4:+32066736 | Msa0847930:CDS |
GAAGAAGATTTCAACAATGG+TGG | 0.600589 | 5_4:+32062678 | Msa0847930:exon |
AAGGTCACAAGGACGAATGT+TGG | 0.601222 | 5_4:+32063782 | Msa0847930:CDS |
GTATGGAATTTCTTCCAACT+CGG | 0.603183 | 5_4:+32070706 | Msa0847930:CDS |
AGGCACTCTCCAAAACCCCT+GGG | 0.603241 | 5_4:+32070308 | Msa0847930:intron |
GCGGCGCAACGGAGTGATCG+TGG | 0.603946 | 5_4:-32066626 | None:intergenic |
TACTACAAGTACAAAGGACT+CGG | 0.604089 | 5_4:+32070622 | Msa0847930:CDS |
TAATTCAGAAGGCAAAAGAA+GGG | 0.604303 | 5_4:+32065740 | Msa0847930:intron |
GGTCCCCAACACAGGATCCA+CGG | 0.606466 | 5_4:-32062648 | None:intergenic |
GCGCCCATAGCGGCGCACAA+GGG | 0.608020 | 5_4:+32066746 | Msa0847930:CDS |
TTGCGCCCCGCATCAAGAGT+GGG | 0.609414 | 5_4:+32066679 | Msa0847930:CDS |
TCCCTGCTTCTGCTGTACGG+AGG | 0.611151 | 5_4:-32070447 | None:intergenic |
AATATCTTCAACTACTAAGG+AGG | 0.612434 | 5_4:+32064523 | Msa0847930:CDS |
TTTGCAGCGAGCACAACGCA+TGG | 0.613380 | 5_4:-32062977 | None:intergenic |
GCGCTCCCACTCTTGATGCG+GGG | 0.623822 | 5_4:-32066684 | None:intergenic |
TGGACAATGATGCTGATAGG+AGG | 0.625036 | 5_4:+32070771 | Msa0847930:CDS |
GGCGGCCAGCCACTGTCCTG+CGG | 0.629070 | 5_4:-32066645 | None:intergenic |
GGAACTTTATTGTTATGACA+AGG | 0.634679 | 5_4:+32065018 | Msa0847930:CDS |
GAATGGAGATTCAACTATCG+GGG | 0.641373 | 5_4:+32070530 | Msa0847930:CDS |
ATCCGACACATATCATGATG+AGG | 0.641909 | 5_4:+32064304 | Msa0847930:CDS |
GTATACAGATTCATTGCCAA+AGG | 0.642712 | 5_4:-32070501 | None:intergenic |
CCCTCCGTACAGCAGAAGCA+GGG | 0.643033 | 5_4:+32070446 | Msa0847930:CDS |
CGCTACACCAGGCTTCTCAG+CGG | 0.643714 | 5_4:+32066704 | Msa0847930:CDS |
TTCCTGCTGTTTCTAAGACG+CGG | 0.645116 | 5_4:+32070393 | Msa0847930:CDS |
TCACTGGAGACAAGGTCACA+AGG | 0.645616 | 5_4:+32063771 | Msa0847930:CDS |
AATGGGAAAGATAGTTGCGT+CGG | 0.645663 | 5_4:-32062572 | None:intergenic |
GTAGCTTCCACCGACAACGA+CGG | 0.646206 | 5_4:+32064134 | Msa0847930:CDS |
CTCGTCGTTGACCTCCCTGG+TGG | 0.656639 | 5_4:-32063818 | None:intergenic |
ATTGCCAAAGGAATCATCAA+CGG | 0.660841 | 5_4:-32070489 | None:intergenic |
ATGAGTCATGAGTCTCGTGA+CGG | 0.661809 | 5_4:-32064070 | None:intergenic |
GTTCAGGACTGATGACAGCA+GGG | 0.663226 | 5_4:+32069414 | Msa0847930:CDS |
GATGAGGCATCAAAGTTGGG+TGG | 0.663974 | 5_4:+32064320 | Msa0847930:CDS |
TAAAGTGCTTAAGGTGCCTG+GGG | 0.666066 | 5_4:+32066221 | Msa0847930:CDS |
TGCCTCATCATGATATGTGT+CGG | 0.666217 | 5_4:-32064306 | None:intergenic |
TGTCCAGGTACAAAGAAGCA+CGG | 0.666419 | 5_4:+32064471 | Msa0847930:CDS |
GATATGACTCCATACATGAG+TGG | 0.668813 | 5_4:+32069274 | Msa0847930:CDS |
TTGCAGTACTACAAGTACAA+AGG | 0.669235 | 5_4:+32070616 | Msa0847930:CDS |
TCGGGGAAGAAATACTATGG+TGG | 0.679997 | 5_4:+32070547 | Msa0847930:CDS |
GAAGAAGTTGACAATACTGG+AGG | 0.702243 | 5_4:+32069050 | Msa0847930:CDS |
TTTCATCCCCTCTTCCAGAG+CGG | 0.712573 | 5_4:-32066769 | None:intergenic |
TTCGATTACCACCACCAGGG+AGG | 0.721514 | 5_4:+32063807 | Msa0847930:CDS |
TGATGTTCTAGCTGACGACG+TGG | 0.722306 | 5_4:+32064436 | Msa0847930:CDS |
CCAGATCTGCTCGTTCTGTG+CGG | 0.722895 | 5_4:+32066870 | Msa0847930:CDS |
GCCTTCGATTACCACCACCA+GGG | 0.727082 | 5_4:+32063804 | Msa0847930:CDS |
TTGCTACTTACTGAACCCAG+GGG | 0.730240 | 5_4:-32070323 | None:intergenic |
GGTGCCTGGGGAAATCTGAG+AGG | 0.732683 | 5_4:+32066233 | Msa0847930:CDS |
CTTGCATACAGATTTCTCAG+TGG | 0.734461 | 5_4:+32070751 | Msa0847930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATTACAGATAAAAATT+GGG | + | chr5_4:32066584-32066603 | Msa0847930:intron | 10.0% |
!! | ATTATAATTAGTTCAAATAA+CGG | + | chr5_4:32067422-32067441 | Msa0847930:intron | 10.0% |
!! | AATAAATAAACTTAGAATAA+TGG | - | chr5_4:32069982-32070001 | None:intergenic | 10.0% |
!!! | TATATGGTATTAATTTTGTT+AGG | + | chr5_4:32063943-32063962 | Msa0847930:intron | 15.0% |
!! | CATTAGATAAATTATGTATT+TGG | + | chr5_4:32064817-32064836 | Msa0847930:intron | 15.0% |
!!! | GATTTAAAATTTTGTTGTTT+TGG | + | chr5_4:32064966-32064985 | Msa0847930:intron | 15.0% |
!! | CATAGAAAGAAAAAAAATAA+AGG | - | chr5_4:32065214-32065233 | None:intergenic | 15.0% |
!! | AAAGATAATAAGTATAATTG+TGG | + | chr5_4:32066352-32066371 | Msa0847930:CDS | 15.0% |
!! | GTAACATGATAAAAAATAAT+AGG | - | chr5_4:32066419-32066438 | None:intergenic | 15.0% |
!! | AATTTAATTACCATATACTA+TGG | - | chr5_4:32066483-32066502 | None:intergenic | 15.0% |
!! | CATTTATTACAGATAAAAAT+TGG | + | chr5_4:32066583-32066602 | Msa0847930:intron | 15.0% |
!!! | TTTTTAAGTAATTTTTTCGA+GGG | - | chr5_4:32067179-32067198 | None:intergenic | 15.0% |
!! | TTTAAAAATTAAGAGAAGAA+GGG | + | chr5_4:32068030-32068049 | Msa0847930:intron | 15.0% |
!!! | TTAAATCTTAAAGCTTTATT+GGG | + | chr5_4:32068072-32068091 | Msa0847930:intron | 15.0% |
!!! | TTTAAATAGTGATCTTTTAA+TGG | + | chr5_4:32068224-32068243 | Msa0847930:intron | 15.0% |
!!! | ATCTTTTGCTTTATATAAAT+AGG | - | chr5_4:32068664-32068683 | None:intergenic | 15.0% |
!!! | GTTTATTTGTTATTGGTTTT+GGG | + | chr5_4:32062730-32062749 | Msa0847930:CDS | 20.0% |
!!! | TTTGTTTGAAATTGAGTAAT+GGG | + | chr5_4:32063084-32063103 | Msa0847930:intron | 20.0% |
!!! | AGAAATTTTGAAGCTTTTTA+AGG | + | chr5_4:32063132-32063151 | Msa0847930:intron | 20.0% |
!!! | GAAATTTTGAAGCTTTTTAA+GGG | + | chr5_4:32063133-32063152 | Msa0847930:intron | 20.0% |
!!! | AAATTTTGAAGCTTTTTAAG+GGG | + | chr5_4:32063134-32063153 | Msa0847930:intron | 20.0% |
!!! | TGTAACATTTTATGATACTT+CGG | + | chr5_4:32063270-32063289 | Msa0847930:intron | 20.0% |
!! | AATTCAAGAGATAAATTTCA+AGG | - | chr5_4:32063563-32063582 | None:intergenic | 20.0% |
!! | AAAAAAACTAGAGATATTCA+GGG | - | chr5_4:32063644-32063663 | None:intergenic | 20.0% |
!! | AAAAAAAACTAGAGATATTC+AGG | - | chr5_4:32063645-32063664 | None:intergenic | 20.0% |
!!! | GTAAATTGTTTCTTGTAAAT+AGG | + | chr5_4:32064886-32064905 | Msa0847930:intron | 20.0% |
!! | CTAATCTTTATAATAAGTGT+AGG | - | chr5_4:32065260-32065279 | None:intergenic | 20.0% |
!!! | ATCATGAAGTTGTTATTAAT+AGG | - | chr5_4:32065619-32065638 | None:intergenic | 20.0% |
!!! | ATTTAACTTGTTCAACTATT+AGG | + | chr5_4:32065637-32065656 | Msa0847930:intron | 20.0% |
!!! | AAACAAAATCTTTTATGCAT+TGG | + | chr5_4:32065925-32065944 | Msa0847930:intron | 20.0% |
!!! | GAATCTAACAATCTATTTTA+TGG | + | chr5_4:32066098-32066117 | Msa0847930:intron | 20.0% |
!!! | GTTTTCAAATTTTATTGAGT+AGG | + | chr5_4:32066136-32066155 | Msa0847930:intron | 20.0% |
!!! | AAATTTTATTGAGTAGGAAA+GGG | + | chr5_4:32066142-32066161 | Msa0847930:intron | 20.0% |
!! | TTATCTTTATCCAAAATTTC+AGG | - | chr5_4:32066340-32066359 | None:intergenic | 20.0% |
!!! | ATTTATTTCCTTTTCTCAAA+CGG | + | chr5_4:32066500-32066519 | Msa0847930:intron | 20.0% |
!!! | CTTTTTAAGTAATTTTTTCG+AGG | - | chr5_4:32067180-32067199 | None:intergenic | 20.0% |
!! | CTCGAAAAAATTACTTAAAA+AGG | + | chr5_4:32067178-32067197 | Msa0847930:intron | 20.0% |
!!! | CTTTAAAAATTAAGAGAAGA+AGG | + | chr5_4:32068029-32068048 | Msa0847930:intron | 20.0% |
!!! | GTTAAATCTTAAAGCTTTAT+TGG | + | chr5_4:32068071-32068090 | Msa0847930:intron | 20.0% |
!! | ACTATTTAAATCAATTTGAC+AGG | - | chr5_4:32068214-32068233 | None:intergenic | 20.0% |
!!! | AACAATATTTTGTGGAATTT+GGG | + | chr5_4:32068302-32068321 | Msa0847930:intron | 20.0% |
!! | TACAATTTACAAATGTTTAG+AGG | + | chr5_4:32068606-32068625 | Msa0847930:intron | 20.0% |
!! | ACAATTTACAAATGTTTAGA+GGG | + | chr5_4:32068607-32068626 | Msa0847930:intron | 20.0% |
!! | TAAATCACAAAAACTAACTA+AGG | + | chr5_4:32068684-32068703 | Msa0847930:intron | 20.0% |
!! | ATAAAACTCACAATAAAGTA+AGG | + | chr5_4:32068796-32068815 | Msa0847930:intron | 20.0% |
!! | TAAAACTCACAATAAAGTAA+GGG | + | chr5_4:32068797-32068816 | Msa0847930:intron | 20.0% |
!!! | TATGTTTTGTGTTTATGTTT+AGG | + | chr5_4:32068853-32068872 | Msa0847930:intron | 20.0% |
!! | CTATTTATAAGAGACAAATT+AGG | - | chr5_4:32068889-32068908 | None:intergenic | 20.0% |
!!! | CTAATTTGTCTCTTATAAAT+AGG | + | chr5_4:32068887-32068906 | Msa0847930:intron | 20.0% |
!! | AAAGTTGAACATAAAAATCT+AGG | - | chr5_4:32068949-32068968 | None:intergenic | 20.0% |
!!! | TTTTATGTTCAACTTTCATA+TGG | + | chr5_4:32068953-32068972 | Msa0847930:intron | 20.0% |
!! | TTTATGTTCAACTTTCATAT+GGG | + | chr5_4:32068954-32068973 | Msa0847930:intron | 20.0% |
!! | AATACGATTGTAAGAATATT+TGG | - | chr5_4:32069078-32069097 | None:intergenic | 20.0% |
!!! | TGTAATTTTGCTTTTACATT+AGG | + | chr5_4:32069165-32069184 | Msa0847930:intron | 20.0% |
!!! | ACTTGTATAATCTCATTTTA+GGG | - | chr5_4:32069498-32069517 | None:intergenic | 20.0% |
!!! | ATTAACTAAGTTTAGGTTAT+AGG | - | chr5_4:32069583-32069602 | None:intergenic | 20.0% |
!! | ATTCTCAATTAACTAAGTTT+AGG | - | chr5_4:32069590-32069609 | None:intergenic | 20.0% |
!! | TAGTTAATTGAGAATCAATT+TGG | + | chr5_4:32069595-32069614 | Msa0847930:intron | 20.0% |
!! | AGTTAATTGAGAATCAATTT+GGG | + | chr5_4:32069596-32069615 | Msa0847930:intron | 20.0% |
!! | TTTATAAGTAGAATTGTAGA+AGG | - | chr5_4:32069770-32069789 | None:intergenic | 20.0% |
!! | TATATCTAGTATATGTTACA+AGG | + | chr5_4:32069814-32069833 | Msa0847930:intron | 20.0% |
!! | AACAAAAACAAAAATCATAG+TGG | + | chr5_4:32070833-32070852 | Msa0847930:CDS | 20.0% |
!! | TTTCACTAATATAAGTAGAA+TGG | + | chr5_4:32071025-32071044 | Msa0847930:three_prime_UTR | 20.0% |
!! | TTCACTAATATAAGTAGAAT+GGG | + | chr5_4:32071026-32071045 | Msa0847930:three_prime_UTR | 20.0% |
!! | ATAGAAAATGAACATAAAAC+AGG | - | chr5_4:32071217-32071236 | None:intergenic | 20.0% |
! | TAAGAAGAAGATTTCAACAA+TGG | + | chr5_4:32062675-32062694 | Msa0847930:exon | 25.0% |
!!! | AGGTTTGGTTTATTTGTTAT+TGG | + | chr5_4:32062723-32062742 | Msa0847930:CDS | 25.0% |
!!! | GGTTTATTTGTTATTGGTTT+TGG | + | chr5_4:32062729-32062748 | Msa0847930:CDS | 25.0% |
!! | CTCTTTTGAATCATTGAATT+CGG | + | chr5_4:32062900-32062919 | Msa0847930:CDS | 25.0% |
!! | GTTTGTTTGAAATTGAGTAA+TGG | + | chr5_4:32063083-32063102 | Msa0847930:intron | 25.0% |
! | AAGAGTCATATCATCATATA+TGG | + | chr5_4:32063927-32063946 | Msa0847930:intron | 25.0% |
! | AAAGGAAATCATGTTAATGT+TGG | + | chr5_4:32063981-32064000 | Msa0847930:CDS | 25.0% |
! | TTCTTAACTTCAATATTGAC+AGG | - | chr5_4:32064200-32064219 | None:intergenic | 25.0% |
! | ATCAGTATTTGAATTACTCA+AGG | - | chr5_4:32064420-32064439 | None:intergenic | 25.0% |
! | TCAAATATCTTCAACTACTA+AGG | + | chr5_4:32064520-32064539 | Msa0847930:CDS | 25.0% |
!! | ATTTTCAACAGATGTTAGAT+TGG | - | chr5_4:32064708-32064727 | None:intergenic | 25.0% |
! | AAAATGAGGTGTGAATATAT+TGG | + | chr5_4:32064723-32064742 | Msa0847930:intron | 25.0% |
!! | TAACATCATATCTTTTGCAA+GGG | + | chr5_4:32065570-32065589 | Msa0847930:CDS | 25.0% |
! | CTATTAGGACCTTTAATTAA+TGG | + | chr5_4:32065652-32065671 | Msa0847930:intron | 25.0% |
! | GTGAAGATTCCATTAATTAA+AGG | - | chr5_4:32065664-32065683 | None:intergenic | 25.0% |
! | GTTTGAATATCTAATTCAGA+AGG | + | chr5_4:32065729-32065748 | Msa0847930:intron | 25.0% |
! | ATCTTAGATAATATCCCAAT+TGG | - | chr5_4:32065781-32065800 | None:intergenic | 25.0% |
!! | TTATCTAAGATACACAAGAT+TGG | + | chr5_4:32065790-32065809 | Msa0847930:CDS | 25.0% |
! | TCATTCTTTATCAATGCTAT+TGG | + | chr5_4:32065883-32065902 | Msa0847930:intron | 25.0% |
! | TATGCAATATATTTGTCTCA+AGG | + | chr5_4:32065990-32066009 | Msa0847930:CDS | 25.0% |
!! | CAAATTTTATTGAGTAGGAA+AGG | + | chr5_4:32066141-32066160 | Msa0847930:intron | 25.0% |
! | GAAACTTCAACATTTATGAA+AGG | - | chr5_4:32066181-32066200 | None:intergenic | 25.0% |
! | ATAATAAGTATAATTGTGGC+AGG | + | chr5_4:32066356-32066375 | Msa0847930:CDS | 25.0% |
!!! | GTTTTATTAGCCATAGTATA+TGG | + | chr5_4:32066470-32066489 | Msa0847930:intron | 25.0% |
! | ACTATTATTCAAGAGAAAGT+AGG | + | chr5_4:32066550-32066569 | Msa0847930:intron | 25.0% |
!! | AAACAATTTCTCACCTTTTA+TGG | + | chr5_4:32066805-32066824 | Msa0847930:CDS | 25.0% |
!!! | CTGTTTTTAAAAAATCATCG+TGG | + | chr5_4:32067144-32067163 | Msa0847930:intron | 25.0% |
! | AGATGTAAATATTCTGTCTT+TGG | + | chr5_4:32067488-32067507 | Msa0847930:intron | 25.0% |
! | TTGTACTAAATTGTATATCG+CGG | + | chr5_4:32067611-32067630 | Msa0847930:intron | 25.0% |
! | CACTTTAACTATCAAGTATT+TGG | - | chr5_4:32067855-32067874 | None:intergenic | 25.0% |
!! | CAAATACTTGATAGTTAAAG+TGG | + | chr5_4:32067853-32067872 | Msa0847930:intron | 25.0% |
!! | GAAGTTTGAACAATATTTTG+TGG | + | chr5_4:32068294-32068313 | Msa0847930:intron | 25.0% |
!! | GAACAATATTTTGTGGAATT+TGG | + | chr5_4:32068301-32068320 | Msa0847930:intron | 25.0% |
!! | ACAATATTTTGTGGAATTTG+GGG | + | chr5_4:32068303-32068322 | Msa0847930:intron | 25.0% |
! | TCTAGTACAATACTAAAAGA+CGG | - | chr5_4:32068480-32068499 | None:intergenic | 25.0% |
! | ATTCTGATTTATGAACATTG+AGG | + | chr5_4:32068575-32068594 | Msa0847930:intron | 25.0% |
! | CAATTTACAAATGTTTAGAG+GGG | + | chr5_4:32068608-32068627 | Msa0847930:intron | 25.0% |
! | TTTATATAAATAGGACCACA+GGG | - | chr5_4:32068655-32068674 | None:intergenic | 25.0% |
! | AAAACTCACAATAAAGTAAG+GGG | + | chr5_4:32068798-32068817 | Msa0847930:intron | 25.0% |
! | AATCGTATTAAAACGATTTC+AGG | + | chr5_4:32069089-32069108 | Msa0847930:CDS | 25.0% |
!!! | TATCTTTTTTTTGTGTCTGA+AGG | + | chr5_4:32069453-32069472 | Msa0847930:intron | 25.0% |
!! | TTGTATAATCTCATTTTAGG+GGG | - | chr5_4:32069496-32069515 | None:intergenic | 25.0% |
!! | CTTGTATAATCTCATTTTAG+GGG | - | chr5_4:32069497-32069516 | None:intergenic | 25.0% |
!! | CACTTGTATAATCTCATTTT+AGG | - | chr5_4:32069499-32069518 | None:intergenic | 25.0% |
!! | TGTTCAACTCATTCAATTTT+TGG | + | chr5_4:32069526-32069545 | Msa0847930:intron | 25.0% |
! | GTTAATTGAGAATCAATTTG+GGG | + | chr5_4:32069597-32069616 | Msa0847930:intron | 25.0% |
! | AATTCAGAAGTGATTTGAAT+AGG | + | chr5_4:32069651-32069670 | Msa0847930:intron | 25.0% |
! | AAGTGATTTGAATAGGAAAT+TGG | + | chr5_4:32069658-32069677 | Msa0847930:intron | 25.0% |
! | CTACAATTCTACTTATAAAC+AGG | + | chr5_4:32069771-32069790 | Msa0847930:intron | 25.0% |
! | TATATGTTACAAGGTTGTAA+GGG | + | chr5_4:32069823-32069842 | Msa0847930:intron | 25.0% |
!!! | AACTACAAACCACTTTTAAT+GGG | - | chr5_4:32069855-32069874 | None:intergenic | 25.0% |
!!! | AAACTACAAACCACTTTTAA+TGG | - | chr5_4:32069856-32069875 | None:intergenic | 25.0% |
!!! | TTTGTAGTTTTGTACTTTCT+AGG | + | chr5_4:32069866-32069885 | Msa0847930:intron | 25.0% |
!!! | TTTTAAGACTCCTTTTGAAA+AGG | + | chr5_4:32070020-32070039 | Msa0847930:intron | 25.0% |
!! | GATTTTCTGTATGTAAATTG+AGG | + | chr5_4:32070088-32070107 | Msa0847930:intron | 25.0% |
!! | GACTTTTCAGATTACATTTT+TGG | + | chr5_4:32070656-32070675 | Msa0847930:CDS | 25.0% |
!!! | TAGCAGTGACAAATTTTTTA+AGG | - | chr5_4:32070874-32070893 | None:intergenic | 25.0% |
!!! | TCAAACATCTGGAATATTTT+TGG | + | chr5_4:32070986-32071005 | Msa0847930:three_prime_UTR | 25.0% |
!! | CAATCACCTCTAATAATTTT+TGG | + | chr5_4:32071162-32071181 | Msa0847930:three_prime_UTR | 25.0% |
! | ACTGTACCAAAAATTATTAG+AGG | - | chr5_4:32071171-32071190 | None:intergenic | 25.0% |
TTATCCTATAAGGGCAAAAT+GGG | - | chr5_4:32062592-32062611 | None:intergenic | 30.0% | |
TTGAAATCTTCTTCTTATCC+TGG | - | chr5_4:32062672-32062691 | None:intergenic | 30.0% | |
!!! | TTTGAGATTTTAGGGTTTCA+AGG | + | chr5_4:32062703-32062722 | Msa0847930:CDS | 30.0% |
CGAATTCAATGATTCAAAAG+AGG | - | chr5_4:32062902-32062921 | None:intergenic | 30.0% | |
! | TGTTTTTCATGTTATGCATG+TGG | + | chr5_4:32063061-32063080 | Msa0847930:intron | 30.0% |
!! | AGCTTTTTAAGGGGATATAA+TGG | + | chr5_4:32063143-32063162 | Msa0847930:intron | 30.0% |
! | AGGGGATATAATGGAAAATT+AGG | + | chr5_4:32063152-32063171 | Msa0847930:intron | 30.0% |
! | GGGGATATAATGGAAAATTA+GGG | + | chr5_4:32063153-32063172 | Msa0847930:intron | 30.0% |
! | AATGGAAAATTAGGGTATTC+CGG | + | chr5_4:32063161-32063180 | Msa0847930:intron | 30.0% |
AACAAACACACAAAACACTA+CGG | - | chr5_4:32063315-32063334 | None:intergenic | 30.0% | |
CACTTTGTGAAAATATCTCT+CGG | - | chr5_4:32063365-32063384 | None:intergenic | 30.0% | |
TGATGATATGACTCTTGAAA+CGG | - | chr5_4:32063923-32063942 | None:intergenic | 30.0% | |
TTTAGATTCCAAAGGAAATG+AGG | - | chr5_4:32064174-32064193 | None:intergenic | 30.0% | |
!! | ACAGGATTTTTAGATTCCAA+AGG | - | chr5_4:32064182-32064201 | None:intergenic | 30.0% |
GTATTTGAATTACTCAAGGA+AGG | - | chr5_4:32064416-32064435 | None:intergenic | 30.0% | |
AATATCTTCAACTACTAAGG+AGG | + | chr5_4:32064523-32064542 | Msa0847930:CDS | 30.0% | |
! | ATTGTCAGTTTTTGTAGACT+TGG | - | chr5_4:32064564-32064583 | None:intergenic | 30.0% |
! | CGAACATTTTGTTGAAGATT+TGG | - | chr5_4:32064620-32064639 | None:intergenic | 30.0% |
CTTCAACAAAATGTTCGTAA+TGG | + | chr5_4:32064623-32064642 | Msa0847930:CDS | 30.0% | |
TCTAACATCTGTTGAAAATG+AGG | + | chr5_4:32064709-32064728 | Msa0847930:intron | 30.0% | |
! | CTGTTTCTTGTAAAAAAGAC+CGG | - | chr5_4:32064782-32064801 | None:intergenic | 30.0% |
!! | ACAAGAAACAGTTGACTTTT+TGG | + | chr5_4:32064791-32064810 | Msa0847930:intron | 30.0% |
! | TTGTTTCTTGTAAATAGGAC+CGG | + | chr5_4:32064891-32064910 | Msa0847930:intron | 30.0% |
!!! | AATTTTGTTGTTTTGGCAGT+TGG | + | chr5_4:32064973-32064992 | Msa0847930:intron | 30.0% |
!!! | ATTTTGTTGTTTTGGCAGTT+GGG | + | chr5_4:32064974-32064993 | Msa0847930:intron | 30.0% |
GGAACTTTATTGTTATGACA+AGG | + | chr5_4:32065018-32065037 | Msa0847930:CDS | 30.0% | |
! | TTAGGAAACATTCTAGTTGT+TGG | + | chr5_4:32065350-32065369 | Msa0847930:intron | 30.0% |
TGCAAAAGATATGATGTTAG+AGG | - | chr5_4:32065569-32065588 | None:intergenic | 30.0% | |
! | CTAACATCATATCTTTTGCA+AGG | + | chr5_4:32065569-32065588 | Msa0847930:CDS | 30.0% |
ATCTTCACAATGTTCTCAAT+AGG | + | chr5_4:32065676-32065695 | Msa0847930:intron | 30.0% | |
TAATTCAGAAGGCAAAAGAA+GGG | + | chr5_4:32065740-32065759 | Msa0847930:intron | 30.0% | |
! | AAATGCAGATAAAGTGCTTA+AGG | + | chr5_4:32066212-32066231 | Msa0847930:intron | 30.0% |
TGATGGAGATATTGAAACTT+TGG | + | chr5_4:32066288-32066307 | Msa0847930:CDS | 30.0% | |
AGAAATAAATGTGACATGGA+AGG | - | chr5_4:32066394-32066413 | None:intergenic | 30.0% | |
GGAAAGAAATAAATGTGACA+TGG | - | chr5_4:32066398-32066417 | None:intergenic | 30.0% | |
! | TTTTATCATGTTACTGTGCT+TGG | + | chr5_4:32066425-32066444 | Msa0847930:intron | 30.0% |
ACAGATAAAAATTGGGATCT+AGG | + | chr5_4:32066591-32066610 | Msa0847930:intron | 30.0% | |
! | GAAAGAAAGATATTTGTTGC+CGG | - | chr5_4:32066846-32066865 | None:intergenic | 30.0% |
!! | ATGATTTTAAGCTAGGTTGA+GGG | + | chr5_4:32066996-32067015 | Msa0847930:intron | 30.0% |
!!! | TTAAGTAATTTTTTCGAGGG+CGG | - | chr5_4:32067176-32067195 | None:intergenic | 30.0% |
TGTATATACACACACTTAGT+GGG | - | chr5_4:32067392-32067411 | None:intergenic | 30.0% | |
ATGTATATACACACACTTAG+TGG | - | chr5_4:32067393-32067412 | None:intergenic | 30.0% | |
TGTATATCGCGGAATAAAAT+CGG | + | chr5_4:32067622-32067641 | Msa0847930:intron | 30.0% | |
ATGGTGATAAACTACTCAAA+GGG | + | chr5_4:32067998-32068017 | Msa0847930:intron | 30.0% | |
TTAAGATTTAACCTTCCAAG+AGG | - | chr5_4:32068063-32068082 | None:intergenic | 30.0% | |
!! | AATCTTAAAGCTTTATTGGG+AGG | + | chr5_4:32068075-32068094 | Msa0847930:intron | 30.0% |
!! | ATCTTAAAGCTTTATTGGGA+GGG | + | chr5_4:32068076-32068095 | Msa0847930:intron | 30.0% |
!!! | ATGTTGCGGTCAATTTTTTA+AGG | - | chr5_4:32068118-32068137 | None:intergenic | 30.0% |
CAAACTTCTAATAGATGTTG+CGG | - | chr5_4:32068132-32068151 | None:intergenic | 30.0% | |
! | GTGATCTTTTAATGGTTTTC+CGG | + | chr5_4:32068232-32068251 | Msa0847930:intron | 30.0% |
!! | TTTATGACCTTAAGTTGACT+TGG | + | chr5_4:32068549-32068568 | Msa0847930:intron | 30.0% |
GAATATACCAAGTCAACTTA+AGG | - | chr5_4:32068559-32068578 | None:intergenic | 30.0% | |
CTTTATATAAATAGGACCAC+AGG | - | chr5_4:32068656-32068675 | None:intergenic | 30.0% | |
TCTTATTAAATGAGCGTTAG+CGG | - | chr5_4:32068748-32068767 | None:intergenic | 30.0% | |
AAACTCACAATAAAGTAAGG+GGG | + | chr5_4:32068799-32068818 | Msa0847930:intron | 30.0% | |
TCTCTTATAAATAGGACTAG+AGG | + | chr5_4:32068895-32068914 | Msa0847930:intron | 30.0% | |
CTCTTATAAATAGGACTAGA+GGG | + | chr5_4:32068896-32068915 | Msa0847930:intron | 30.0% | |
!!! | TGTTGTTTATTTTGACAGTC+TGG | + | chr5_4:32069205-32069224 | Msa0847930:intron | 30.0% |
ACTGCATAAAGACTGTAAAA+TGG | - | chr5_4:32069316-32069335 | None:intergenic | 30.0% | |
! | ATTTTACAGTCTTTATGCAG+TGG | + | chr5_4:32069315-32069334 | Msa0847930:CDS | 30.0% |
AAGCATTCATGATATCCAAA+TGG | - | chr5_4:32069345-32069364 | None:intergenic | 30.0% | |
! | ATCATGAATGCTTCATTTTC+AGG | + | chr5_4:32069352-32069371 | Msa0847930:CDS | 30.0% |
TCTTCACATAGCAAACATAA+TGG | - | chr5_4:32069378-32069397 | None:intergenic | 30.0% | |
!! | TGTATAATCTCATTTTAGGG+GGG | - | chr5_4:32069495-32069514 | None:intergenic | 30.0% |
! | TAAGTTTAGGTTATAGGTTG+AGG | - | chr5_4:32069577-32069596 | None:intergenic | 30.0% |
CTTTGGACAAACTTAAAATG+AGG | - | chr5_4:32069692-32069711 | None:intergenic | 30.0% | |
!!! | CATTTTAAGTTTGTCCAAAG+AGG | + | chr5_4:32069692-32069711 | Msa0847930:intron | 30.0% |
GTATATGTTACAAGGTTGTA+AGG | + | chr5_4:32069822-32069841 | Msa0847930:intron | 30.0% | |
TTTGAAAAACAAAAGGCAGT+AGG | - | chr5_4:32069938-32069957 | None:intergenic | 30.0% | |
!! | AGAAGGCTTTGAAAAACAAA+AGG | - | chr5_4:32069945-32069964 | None:intergenic | 30.0% |
TGGATTGCAATTTCTTTAGA+AGG | - | chr5_4:32069962-32069981 | None:intergenic | 30.0% | |
ATGCTCATTTGAAAATTTCC+AGG | + | chr5_4:32070288-32070307 | Msa0847930:intron | 30.0% | |
AAGAATGGAGATTCAACTAT+CGG | + | chr5_4:32070528-32070547 | Msa0847930:CDS | 30.0% | |
!!! | TTCAGATTACATTTTTGGTG+AGG | + | chr5_4:32070661-32070680 | Msa0847930:CDS | 30.0% |
ACAAAAATCATAGTGGTAGA+TGG | + | chr5_4:32070840-32070859 | Msa0847930:CDS | 30.0% | |
CAAAAATCATAGTGGTAGAT+GGG | + | chr5_4:32070841-32070860 | Msa0847930:CDS | 30.0% | |
AAAAATCATAGTGGTAGATG+GGG | + | chr5_4:32070842-32070861 | Msa0847930:CDS | 30.0% | |
TTGAGATAGAATCAAACATC+TGG | + | chr5_4:32070975-32070994 | Msa0847930:three_prime_UTR | 30.0% | |
AGAATTCTTGTGTACAAGTA+AGG | + | chr5_4:32071080-32071099 | Msa0847930:three_prime_UTR | 30.0% | |
GTTATCCTATAAGGGCAAAA+TGG | - | chr5_4:32062593-32062612 | None:intergenic | 35.0% | |
GCAAAAGGGTTATCCTATAA+GGG | - | chr5_4:32062601-32062620 | None:intergenic | 35.0% | |
AGCAAAAGGGTTATCCTATA+AGG | - | chr5_4:32062602-32062621 | None:intergenic | 35.0% | |
! | GAAAAGTTGTGATTTTTCCG+TGG | + | chr5_4:32062631-32062650 | Msa0847930:five_prime_UTR | 35.0% |
GAAGAAGATTTCAACAATGG+TGG | + | chr5_4:32062678-32062697 | Msa0847930:exon | 35.0% | |
!! | ATGGTGGTGTTTGAGATTTT+AGG | + | chr5_4:32062694-32062713 | Msa0847930:CDS | 35.0% |
!! | TGGTGGTGTTTGAGATTTTA+GGG | + | chr5_4:32062695-32062714 | Msa0847930:CDS | 35.0% |
!!! | GATTTTAGGGTTTCAAGGTT+TGG | + | chr5_4:32062708-32062727 | Msa0847930:CDS | 35.0% |
!!! | GTTATTGGTTTTGGGTTTTG+TGG | + | chr5_4:32062738-32062757 | Msa0847930:CDS | 35.0% |
TTGTGGTGATTCGTTATGTT+TGG | + | chr5_4:32062755-32062774 | Msa0847930:CDS | 35.0% | |
ACAAGATACTACTGCTTCTA+TGG | + | chr5_4:32062819-32062838 | Msa0847930:CDS | 35.0% | |
TCAAAAGAGGCTGAATTTGA+AGG | - | chr5_4:32062889-32062908 | None:intergenic | 35.0% | |
TTCCTGTTTCAGTTTCTCAT+GGG | + | chr5_4:32062923-32062942 | Msa0847930:CDS | 35.0% | |
!! | GTTAGATACTGGTTTGTTTC+TGG | + | chr5_4:32063003-32063022 | Msa0847930:intron | 35.0% |
TTTCTATGTTCCTAGCCTAA+TGG | - | chr5_4:32063117-32063136 | None:intergenic | 35.0% | |
! | CGAGAGATATTTTCACAAAG+TGG | + | chr5_4:32063363-32063382 | Msa0847930:intron | 35.0% |
ACTGAAGAGAGAAGAAACAT+AGG | - | chr5_4:32063672-32063691 | None:intergenic | 35.0% | |
GAATAACAACTAGAGATGTC+TGG | - | chr5_4:32063704-32063723 | None:intergenic | 35.0% | |
AAGCATGCTTTCTTGTAGTT+CGG | + | chr5_4:32063732-32063751 | Msa0847930:intron | 35.0% | |
GTAAGTGTCAAATTAGTCAC+TGG | + | chr5_4:32063755-32063774 | Msa0847930:CDS | 35.0% | |
TCAGTATCAGGAACAGAATT+TGG | + | chr5_4:32063859-32063878 | Msa0847930:CDS | 35.0% | |
!!! | AGGTTTTTTGCAGAAAGCAA+AGG | + | chr5_4:32063963-32063982 | Msa0847930:intron | 35.0% |
TTAGCAGTATTATCACTGAC+AGG | - | chr5_4:32064104-32064123 | None:intergenic | 35.0% | |
!!! | TATGTGTCGGATTTAGCTTT+TGG | - | chr5_4:32064296-32064315 | None:intergenic | 35.0% |
!! | CACTTAGAAGTGTCTGTTAT+TGG | - | chr5_4:32064383-32064402 | None:intergenic | 35.0% |
AAATTGACTATTACTCCCTC+CGG | + | chr5_4:32064760-32064779 | Msa0847930:intron | 35.0% | |
TTCTTGTAAAAAAGACCGGA+GGG | - | chr5_4:32064778-32064797 | None:intergenic | 35.0% | |
TTTCTTGTAAAAAAGACCGG+AGG | - | chr5_4:32064779-32064798 | None:intergenic | 35.0% | |
GATGATAATAATACTCCCTC+CGG | - | chr5_4:32064913-32064932 | None:intergenic | 35.0% | |
! | CTTTCCTTATGAACTTTTCG+TGG | + | chr5_4:32064997-32065016 | Msa0847930:CDS | 35.0% |
AGTTCCACGAAAAGTTCATA+AGG | - | chr5_4:32065004-32065023 | None:intergenic | 35.0% | |
AAGGTGAAACTATTTCCCTT+TGG | + | chr5_4:32065037-32065056 | Msa0847930:CDS | 35.0% | |
TTTATGTGATGTAACTGCTC+TGG | + | chr5_4:32065120-32065139 | Msa0847930:intron | 35.0% | |
TAAGAGGGATGAGAGATTAA+AGG | + | chr5_4:32065143-32065162 | Msa0847930:intron | 35.0% | |
AAGAGGGATGAGAGATTAAA+GGG | + | chr5_4:32065144-32065163 | Msa0847930:intron | 35.0% | |
TCGTGATGAACGAAATACTT+GGG | + | chr5_4:32065290-32065309 | Msa0847930:intron | 35.0% | |
GAAATACTTGGGAATCAAGT+AGG | + | chr5_4:32065301-32065320 | Msa0847930:intron | 35.0% | |
CTAATTCAGAAGGCAAAAGA+AGG | + | chr5_4:32065739-32065758 | Msa0847930:intron | 35.0% | |
AATATCCCAATTGGAGAAAG+TGG | - | chr5_4:32065772-32065791 | None:intergenic | 35.0% | |
! | AAGATGCGCATGAATTTTTG+AGG | + | chr5_4:32065839-32065858 | Msa0847930:CDS | 35.0% |
!!! | TTGTTTTGAAGTAGCAGCTA+AGG | - | chr5_4:32065911-32065930 | None:intergenic | 35.0% |
!! | GCATTGGCTTTATGAGAAAT+TGG | + | chr5_4:32065941-32065960 | Msa0847930:intron | 35.0% |
TATATTTGTCTCAAGGAAGC+CGG | + | chr5_4:32065997-32066016 | Msa0847930:CDS | 35.0% | |
!! | AGAGTTGTTTCTTCTGTCAA+AGG | - | chr5_4:32066033-32066052 | None:intergenic | 35.0% |
ACAGAAGAAACAACTCTCAT+TGG | + | chr5_4:32066036-32066055 | Msa0847930:CDS | 35.0% | |
! | ACTCTCATTGGATACACTTT+TGG | + | chr5_4:32066048-32066067 | Msa0847930:CDS | 35.0% |
TTTATTGAGTAGGAAAGGGA+TGG | + | chr5_4:32066146-32066165 | Msa0847930:intron | 35.0% | |
TTATTGAGTAGGAAAGGGAT+GGG | + | chr5_4:32066147-32066166 | Msa0847930:intron | 35.0% | |
GATCTTACTGTTGAGATTGA+TGG | + | chr5_4:32066271-32066290 | Msa0847930:CDS | 35.0% | |
TGGAGATATTGAAACTTTGG+AGG | + | chr5_4:32066291-32066310 | Msa0847930:CDS | 35.0% | |
! | AGATATTGAAACTTTGGAGG+AGG | + | chr5_4:32066294-32066313 | Msa0847930:CDS | 35.0% |
! | ATTTACAGCGCCTGAAATTT+TGG | + | chr5_4:32066327-32066346 | Msa0847930:CDS | 35.0% |
TAAATGTGACATGGAAGGAA+AGG | - | chr5_4:32066389-32066408 | None:intergenic | 35.0% | |
! | TCCTTTTCTCAAACGGTATA+TGG | + | chr5_4:32066507-32066526 | Msa0847930:intron | 35.0% |
TCCATATACCGTTTGAGAAA+AGG | - | chr5_4:32066511-32066530 | None:intergenic | 35.0% | |
AACTCAGATTTGGCCATAAA+AGG | - | chr5_4:32066821-32066840 | None:intergenic | 35.0% | |
! | GTGAGTTTTCTTCATCTTTG+TGG | + | chr5_4:32066941-32066960 | Msa0847930:intron | 35.0% |
! | GCTTCTCATGATTTTAAGCT+AGG | + | chr5_4:32066989-32067008 | Msa0847930:intron | 35.0% |
! | CATGATTTTAAGCTAGGTTG+AGG | + | chr5_4:32066995-32067014 | Msa0847930:intron | 35.0% |
! | AGGGAGTAAAAGACAACTTT+TGG | + | chr5_4:32067015-32067034 | Msa0847930:intron | 35.0% |
! | GGGAGTAAAAGACAACTTTT+GGG | + | chr5_4:32067016-32067035 | Msa0847930:intron | 35.0% |
!!! | AAGCGGTTTTAAAGAATCGT+GGG | - | chr5_4:32067090-32067109 | None:intergenic | 35.0% |
!! | AAAGGCACTATCAATCAAAC+TGG | + | chr5_4:32067196-32067215 | Msa0847930:intron | 35.0% |
GATATAGCACTATTGTGTAG+CGG | - | chr5_4:32067563-32067582 | None:intergenic | 35.0% | |
GCTATTTAACAACACTGCTT+TGG | + | chr5_4:32067692-32067711 | Msa0847930:intron | 35.0% | |
!! | AACCAAAGCATTTTCCTACT+AGG | - | chr5_4:32067779-32067798 | None:intergenic | 35.0% |
GATAGTTAAAGTGGTCAATG+CGG | + | chr5_4:32067862-32067881 | Msa0847930:intron | 35.0% | |
TTATTCATCCGTTGCATACA+TGG | + | chr5_4:32067979-32067998 | Msa0847930:intron | 35.0% | |
GTTTATCACCATGTATGCAA+CGG | - | chr5_4:32067990-32068009 | None:intergenic | 35.0% | |
CATGGTGATAAACTACTCAA+AGG | + | chr5_4:32067997-32068016 | Msa0847930:intron | 35.0% | |
TGGTGATAAACTACTCAAAG+GGG | + | chr5_4:32067999-32068018 | Msa0847930:intron | 35.0% | |
!! | TCTTAAAGCTTTATTGGGAG+GGG | + | chr5_4:32068077-32068096 | Msa0847930:intron | 35.0% |
!! | GTTTTTCAGATGTGAATTCG+TGG | + | chr5_4:32068157-32068176 | Msa0847930:intron | 35.0% |
CTTCAACAATTGATTGCTGT+TGG | + | chr5_4:32068404-32068423 | Msa0847930:intron | 35.0% | |
TAAAACCCATGGGACAAAAT+TGG | - | chr5_4:32068533-32068552 | None:intergenic | 35.0% | |
CTTAAGGTCATAAAACCCAT+GGG | - | chr5_4:32068543-32068562 | None:intergenic | 35.0% | |
ACTTAAGGTCATAAAACCCA+TGG | - | chr5_4:32068544-32068563 | None:intergenic | 35.0% | |
!!! | GGTATTTTTGGGAAAGAAGT+TGG | - | chr5_4:32068727-32068746 | None:intergenic | 35.0% |
TTAATAAGACCCACTTGCAT+AGG | + | chr5_4:32068759-32068778 | Msa0847930:intron | 35.0% | |
TAATAAGACCCACTTGCATA+GGG | + | chr5_4:32068760-32068779 | Msa0847930:intron | 35.0% | |
CAGTATTGTCAACTTCTTCT+TGG | - | chr5_4:32069049-32069068 | None:intergenic | 35.0% | |
CAAGAAGAAGTTGACAATAC+TGG | + | chr5_4:32069047-32069066 | Msa0847930:CDS | 35.0% | |
TGCTATGTGAAGAACATTCA+AGG | + | chr5_4:32069385-32069404 | Msa0847930:CDS | 35.0% | |
TGAAGAACATTCAAGGAGAA+TGG | + | chr5_4:32069392-32069411 | Msa0847930:CDS | 35.0% | |
AATTGAGAATCAATTTGGGG+AGG | + | chr5_4:32069600-32069619 | Msa0847930:intron | 35.0% | |
ATTGAGAATCAATTTGGGGA+GGG | + | chr5_4:32069601-32069620 | Msa0847930:intron | 35.0% | |
CAAACTTAAAATGAGGACTC+AGG | - | chr5_4:32069685-32069704 | None:intergenic | 35.0% | |
TTAAGTTTGTCCAAAGAGGA+AGG | + | chr5_4:32069696-32069715 | Msa0847930:intron | 35.0% | |
! | GGGTTTTTACCCATTAAAAG+TGG | + | chr5_4:32069843-32069862 | Msa0847930:intron | 35.0% |
TTTCTAGGCTTAAGAAGCTA+TGG | + | chr5_4:32069881-32069900 | Msa0847930:intron | 35.0% | |
! | ATTTGCCAGTCCTTTTCAAA+AGG | - | chr5_4:32070033-32070052 | None:intergenic | 35.0% |
CATACATGCTTCTTTATGCA+AGG | + | chr5_4:32070174-32070193 | Msa0847930:CDS | 35.0% | |
CTTGAACTTTCCAGTTGAAA+AGG | - | chr5_4:32070354-32070373 | None:intergenic | 35.0% | |
TTTCAACTGGAAAGTTCAAG+AGG | + | chr5_4:32070354-32070373 | Msa0847930:CDS | 35.0% | |
ATTGCCAAAGGAATCATCAA+CGG | - | chr5_4:32070492-32070511 | None:intergenic | 35.0% | |
GTATACAGATTCATTGCCAA+AGG | - | chr5_4:32070504-32070523 | None:intergenic | 35.0% | |
AATCTGTATACCCAGAAGAA+TGG | + | chr5_4:32070513-32070532 | Msa0847930:CDS | 35.0% | |
AGTTGAATCTCCATTCTTCT+GGG | - | chr5_4:32070526-32070545 | None:intergenic | 35.0% | |
TAGTTGAATCTCCATTCTTC+TGG | - | chr5_4:32070527-32070546 | None:intergenic | 35.0% | |
AGAATGGAGATTCAACTATC+GGG | + | chr5_4:32070529-32070548 | Msa0847930:CDS | 35.0% | |
TTGCAGTACTACAAGTACAA+AGG | + | chr5_4:32070616-32070635 | Msa0847930:CDS | 35.0% | |
TACTACAAGTACAAAGGACT+CGG | + | chr5_4:32070622-32070641 | Msa0847930:CDS | 35.0% | |
!!! | ATTACATTTTTGGTGAGGCA+GGG | + | chr5_4:32070666-32070685 | Msa0847930:CDS | 35.0% |
AGTTGGAAGAAATTCCATAC+TGG | - | chr5_4:32070706-32070725 | None:intergenic | 35.0% | |
GTATGGAATTTCTTCCAACT+CGG | + | chr5_4:32070706-32070725 | Msa0847930:CDS | 35.0% | |
! | ATCTGTATGCAAGGTATCAT+AGG | - | chr5_4:32070744-32070763 | None:intergenic | 35.0% |
AAGAATTCTTGCGCTAATAC+TGG | - | chr5_4:32071069-32071088 | None:intergenic | 35.0% | |
!! | CAAGCTTCAGTTTCTAGTGA+CGG | + | chr5_4:32062512-32062531 | Msa0847930:five_prime_UTR | 40.0% |
AATGGGAAAGATAGTTGCGT+CGG | - | chr5_4:32062575-32062594 | None:intergenic | 40.0% | |
! | CTTTCCCATTTTGCCCTTAT+AGG | + | chr5_4:32062585-32062604 | Msa0847930:five_prime_UTR | 40.0% |
TTTCCTCGCATAGAGCAAAA+GGG | - | chr5_4:32062615-32062634 | None:intergenic | 40.0% | |
! | TTTTCCTCGCATAGAGCAAA+AGG | - | chr5_4:32062616-32062635 | None:intergenic | 40.0% |
AGAAGAGAGAAGAGGTTATG+AGG | + | chr5_4:32062791-32062810 | Msa0847930:CDS | 40.0% | |
TACTGCTTCTATGGCTCATA+TGG | + | chr5_4:32062828-32062847 | Msa0847930:CDS | 40.0% | |
ATGGCTCATATGGAAGCTTA+TGG | + | chr5_4:32062838-32062857 | Msa0847930:CDS | 40.0% | |
GTTCCTGTTTCAGTTTCTCA+TGG | + | chr5_4:32062922-32062941 | Msa0847930:CDS | 40.0% | |
TACCCATGAGAAACTGAAAC+AGG | - | chr5_4:32062928-32062947 | None:intergenic | 40.0% | |
!! | TTGAAATTGAGTAATGGGCG+TGG | + | chr5_4:32063089-32063108 | Msa0847930:intron | 40.0% |
! | AATTAGGGTATTCCGGATTG+AGG | + | chr5_4:32063168-32063187 | Msa0847930:intron | 40.0% |
! | ATTAGGGTATTCCGGATTGA+GGG | + | chr5_4:32063169-32063188 | Msa0847930:intron | 40.0% |
! | GGAGGTCTAAGTCTATCTTT+TGG | + | chr5_4:32063196-32063215 | Msa0847930:intron | 40.0% |
! | TAGCCAATGATATTTGCTGC+TGG | + | chr5_4:32063400-32063419 | Msa0847930:intron | 40.0% |
! | ATTTCTTGCCCCATGTTTTC+CGG | - | chr5_4:32063426-32063445 | None:intergenic | 40.0% |
! | TTTGACTCGTGATATTGTCG+TGG | + | chr5_4:32063509-32063528 | Msa0847930:intron | 40.0% |
! | TTGACTCGTGATATTGTCGT+GGG | + | chr5_4:32063510-32063529 | Msa0847930:intron | 40.0% |
AGCATGCTTTCTTGTAGTTC+GGG | + | chr5_4:32063733-32063752 | Msa0847930:intron | 40.0% | |
CAAATTAGTCACTGGAGACA+AGG | + | chr5_4:32063763-32063782 | Msa0847930:CDS | 40.0% | |
ACGACGAGAATGTTACATCT+AGG | + | chr5_4:32063833-32063852 | Msa0847930:CDS | 40.0% | |
CGACGAGAATGTTACATCTA+GGG | + | chr5_4:32063834-32063853 | Msa0847930:CDS | 40.0% | |
! | GGAACAGAATTTGGTCTTCA+TGG | + | chr5_4:32063868-32063887 | Msa0847930:CDS | 40.0% |
!! | AGCAACAGAAGCATTAATGC+TGG | - | chr5_4:32064027-32064046 | None:intergenic | 40.0% |
ATCCGACACATATCATGATG+AGG | + | chr5_4:32064304-32064323 | Msa0847930:CDS | 40.0% | |
TGCCTCATCATGATATGTGT+CGG | - | chr5_4:32064309-32064328 | None:intergenic | 40.0% | |
! | TCATGATGAGGCATCAAAGT+TGG | + | chr5_4:32064316-32064335 | Msa0847930:CDS | 40.0% |
! | CATGATGAGGCATCAAAGTT+GGG | + | chr5_4:32064317-32064336 | Msa0847930:CDS | 40.0% |
TAACAGACACTTCTAAGTGC+AGG | + | chr5_4:32064384-32064403 | Msa0847930:CDS | 40.0% | |
!! | AACGCTAACTTTTGAAGGCA+AGG | - | chr5_4:32064594-32064613 | None:intergenic | 40.0% |
! | GGAACAACGCTAACTTTTGA+AGG | - | chr5_4:32064599-32064618 | None:intergenic | 40.0% |
! | CTTTTGAGCTTCTAAACTGC+TGG | - | chr5_4:32064676-32064695 | None:intergenic | 40.0% |
TTTCTTGTAAATAGGACCGG+AGG | + | chr5_4:32064894-32064913 | Msa0847930:intron | 40.0% | |
TTCTTGTAAATAGGACCGGA+GGG | + | chr5_4:32064895-32064914 | Msa0847930:intron | 40.0% | |
ATGTAACTGCTCTGGTAAGA+GGG | + | chr5_4:32065128-32065147 | Msa0847930:intron | 40.0% | |
AGAGGGATGAGAGATTAAAG+GGG | + | chr5_4:32065145-32065164 | Msa0847930:intron | 40.0% | |
AGAGATTAAAGGGGATAGTG+AGG | + | chr5_4:32065154-32065173 | Msa0847930:intron | 40.0% | |
CTCGTGATGAACGAAATACT+TGG | + | chr5_4:32065289-32065308 | Msa0847930:intron | 40.0% | |
TTCCGACAAAAGTAGCTTGA+AGG | - | chr5_4:32065327-32065346 | None:intergenic | 40.0% | |
!! | CTACTTTTGTCGGAACGTTT+AGG | + | chr5_4:32065332-32065351 | Msa0847930:intron | 40.0% |
! | GAAACATTCTAGTTGTTGGC+TGG | + | chr5_4:32065354-32065373 | Msa0847930:intron | 40.0% |
! | GAGGCATTTCATTAGCAAGA+GGG | - | chr5_4:32065495-32065514 | None:intergenic | 40.0% |
!! | AGAGGCATTTCATTAGCAAG+AGG | - | chr5_4:32065496-32065515 | None:intergenic | 40.0% |
TGTTCTCAATAGGTCAGAAG+AGG | + | chr5_4:32065686-32065705 | Msa0847930:intron | 40.0% | |
GTTCTCAATAGGTCAGAAGA+GGG | + | chr5_4:32065687-32065706 | Msa0847930:intron | 40.0% | |
TTCTCAATAGGTCAGAAGAG+GGG | + | chr5_4:32065688-32065707 | Msa0847930:intron | 40.0% | |
ACTTCTCCACTTTCTCCAAT+TGG | + | chr5_4:32065763-32065782 | Msa0847930:CDS | 40.0% | |
CTTCTCCACTTTCTCCAATT+GGG | + | chr5_4:32065764-32065783 | Msa0847930:CDS | 40.0% | |
CACAAGATTGGAAGTCATCT+TGG | + | chr5_4:32065802-32065821 | Msa0847930:CDS | 40.0% | |
ATTGGAAGTCATCTTGGACA+TGG | + | chr5_4:32065808-32065827 | Msa0847930:CDS | 40.0% | |
TTGGAAGTCATCTTGGACAT+GGG | + | chr5_4:32065809-32065828 | Msa0847930:CDS | 40.0% | |
TGAGAAATTGGTCCATCAAC+AGG | + | chr5_4:32065953-32065972 | Msa0847930:intron | 40.0% | |
GAGAAATTGGTCCATCAACA+GGG | + | chr5_4:32065954-32065973 | Msa0847930:intron | 40.0% | |
AGAAATTGGTCCATCAACAG+GGG | + | chr5_4:32065955-32065974 | Msa0847930:intron | 40.0% | |
TGTCAAAGGACTTGATAGAC+CGG | - | chr5_4:32066019-32066038 | None:intergenic | 40.0% | |
! | CTCATTGGATACACTTTTGG+AGG | + | chr5_4:32066051-32066070 | Msa0847930:CDS | 40.0% |
TGGAGGATATCTACGATCTA+AGG | + | chr5_4:32066068-32066087 | Msa0847930:CDS | 40.0% | |
! | ATAAAGTGCTTAAGGTGCCT+GGG | + | chr5_4:32066220-32066239 | Msa0847930:CDS | 40.0% |
! | TGAGAGGTATGAGAGAATGA+TGG | + | chr5_4:32066249-32066268 | Msa0847930:CDS | 40.0% |
! | ATGGCCAAATCTGAGTTTTC+CGG | + | chr5_4:32066824-32066843 | Msa0847930:CDS | 40.0% |
!! | TTTTAAAGAATCGTGGGGGT+GGG | - | chr5_4:32067084-32067103 | None:intergenic | 40.0% |
!!! | AGCGGTTTTAAAGAATCGTG+GGG | - | chr5_4:32067089-32067108 | None:intergenic | 40.0% |
!!! | GAAGCGGTTTTAAAGAATCG+TGG | - | chr5_4:32067091-32067110 | None:intergenic | 40.0% |
!! | TCTTTAAAACCGCTTCCTTC+CGG | + | chr5_4:32067095-32067114 | Msa0847930:intron | 40.0% |
!!! | AGTTTTTTCCCTGTCCAGAT+GGG | - | chr5_4:32067126-32067145 | None:intergenic | 40.0% |
TACACACACTTAGTGGGATA+AGG | - | chr5_4:32067386-32067405 | None:intergenic | 40.0% | |
TTATCCTGCTATCCCAATCT+CGG | + | chr5_4:32067453-32067472 | Msa0847930:intron | 40.0% | |
TGGACCAATGTTGTCAATTG+CGG | + | chr5_4:32067508-32067527 | Msa0847930:intron | 40.0% | |
CTATCCGCAATTGACAACAT+TGG | - | chr5_4:32067515-32067534 | None:intergenic | 40.0% | |
ATGTTGTCAATTGCGGATAG+TGG | + | chr5_4:32067515-32067534 | Msa0847930:intron | 40.0% | |
!! | TTGCGGATAGTGGAAAATAG+TGG | + | chr5_4:32067525-32067544 | Msa0847930:intron | 40.0% |
ATAGATGCGCTATACCACTA+TGG | - | chr5_4:32067668-32067687 | None:intergenic | 40.0% | |
! | ATTTTCCTACTAGGTGGAGT+TGG | - | chr5_4:32067770-32067789 | None:intergenic | 40.0% |
!! | CAAAGCATTTTCCTACTAGG+TGG | - | chr5_4:32067776-32067795 | None:intergenic | 40.0% |
CACCTAGTAGGAAAATGCTT+TGG | + | chr5_4:32067774-32067793 | Msa0847930:intron | 40.0% | |
!! | AAACTACTCAAAGGGGTGTT+AGG | + | chr5_4:32068006-32068025 | Msa0847930:intron | 40.0% |
AAGAAGGGTCATAAACCTCT+TGG | + | chr5_4:32068045-32068064 | Msa0847930:intron | 40.0% | |
GCATGACTTCAAAGAGAATC+CGG | - | chr5_4:32068254-32068273 | None:intergenic | 40.0% | |
TCTCATTTGTCTCATTGCAG+TGG | - | chr5_4:32068276-32068295 | None:intergenic | 40.0% | |
GACAAAATTGGCATTGTGCT+TGG | - | chr5_4:32068521-32068540 | None:intergenic | 40.0% | |
! | ACAATGCCAATTTTGTCCCA+TGG | + | chr5_4:32068524-32068543 | Msa0847930:intron | 40.0% |
! | CAATGCCAATTTTGTCCCAT+GGG | + | chr5_4:32068525-32068544 | Msa0847930:intron | 40.0% |
! | TGGTTCTATATTACTCCCTG+TGG | + | chr5_4:32068637-32068656 | Msa0847930:intron | 40.0% |
! | TGAGCGTTAGCGGTATTTTT+GGG | - | chr5_4:32068738-32068757 | None:intergenic | 40.0% |
! | ATGAGCGTTAGCGGTATTTT+TGG | - | chr5_4:32068739-32068758 | None:intergenic | 40.0% |
CAATAAAGTAAGGGGGCAAA+AGG | + | chr5_4:32068806-32068825 | Msa0847930:intron | 40.0% | |
GAAGAAGTTGACAATACTGG+AGG | + | chr5_4:32069050-32069069 | Msa0847930:CDS | 40.0% | |
TCATGTATGGAGTCATATCC+AGG | - | chr5_4:32069273-32069292 | None:intergenic | 40.0% | |
GATATGACTCCATACATGAG+TGG | + | chr5_4:32069274-32069293 | Msa0847930:CDS | 40.0% | |
TCCATACATGAGTGGAAGAA+AGG | + | chr5_4:32069282-32069301 | Msa0847930:CDS | 40.0% | |
TCCTTTCTTCCACTCATGTA+TGG | - | chr5_4:32069286-32069305 | None:intergenic | 40.0% | |
ACATTCAAGGAGAATGGTTC+AGG | + | chr5_4:32069398-32069417 | Msa0847930:CDS | 40.0% | |
!! | ATAATCTCATTTTAGGGGGG+AGG | - | chr5_4:32069492-32069511 | None:intergenic | 40.0% |
CAAATGTTCTCCTTCCTCTT+TGG | - | chr5_4:32069709-32069728 | None:intergenic | 40.0% | |
!! | AGACTCCTTTTGAAAAGGAC+TGG | + | chr5_4:32070025-32070044 | Msa0847930:intron | 40.0% |
TGACATTTGTGCTTCTCTTC+AGG | + | chr5_4:32070112-32070131 | Msa0847930:intron | 40.0% | |
AAGACTCTTGACAATTCGAC+AGG | - | chr5_4:32070143-32070162 | None:intergenic | 40.0% | |
! | ATTGCTACTTACTGAACCCA+GGG | - | chr5_4:32070327-32070346 | None:intergenic | 40.0% |
! | AGCAATGCAACCTTTTCAAC+TGG | + | chr5_4:32070341-32070360 | Msa0847930:CDS | 40.0% |
AAAGTTCAAGAGGAGAAGCT+TGG | + | chr5_4:32070364-32070383 | Msa0847930:CDS | 40.0% | |
AGAATCAGCATTTGTAGCCA+TGG | - | chr5_4:32070426-32070445 | None:intergenic | 40.0% | |
!! | AATGCCGTTGATGATTCCTT+TGG | + | chr5_4:32070485-32070504 | Msa0847930:CDS | 40.0% |
GAATGGAGATTCAACTATCG+GGG | + | chr5_4:32070530-32070549 | Msa0847930:CDS | 40.0% | |
CTATCGGGGAAGAAATACTA+TGG | + | chr5_4:32070544-32070563 | Msa0847930:CDS | 40.0% | |
!!! | GATTACATTTTTGGTGAGGC+AGG | + | chr5_4:32070665-32070684 | Msa0847930:CDS | 40.0% |
CACTGAGAAATCTGTATGCA+AGG | - | chr5_4:32070753-32070772 | None:intergenic | 40.0% | |
CTTGCATACAGATTTCTCAG+TGG | + | chr5_4:32070751-32070770 | Msa0847930:CDS | 40.0% | |
! | GTACAGCAGAACTTTTGTCA+TGG | - | chr5_4:32070901-32070920 | None:intergenic | 40.0% |
CGTCACTAGAAACTGAAGCT+TGG | - | chr5_4:32062514-32062533 | None:intergenic | 45.0% | |
! | TAACCCTTTTGCTCTATGCG+AGG | + | chr5_4:32062609-32062628 | Msa0847930:five_prime_UTR | 45.0% |
! | TTTTTCCGTGGATCCTGTGT+TGG | + | chr5_4:32062643-32062662 | Msa0847930:five_prime_UTR | 45.0% |
! | TTTTCCGTGGATCCTGTGTT+GGG | + | chr5_4:32062644-32062663 | Msa0847930:five_prime_UTR | 45.0% |
TGCTGAAGAGAAGAGAGAAG+AGG | + | chr5_4:32062783-32062802 | Msa0847930:CDS | 45.0% | |
GAGAGAAGAGGTTATGAGGT+TGG | + | chr5_4:32062795-32062814 | Msa0847930:CDS | 45.0% | |
GCTGCAAAGCTGTTAGATAC+TGG | + | chr5_4:32062992-32063011 | Msa0847930:CDS | 45.0% | |
! | GTATTCCGGATTGAGGGTTT+TGG | + | chr5_4:32063175-32063194 | Msa0847930:intron | 45.0% |
! | CAATGATATTTGCTGCTGGC+CGG | + | chr5_4:32063404-32063423 | Msa0847930:intron | 45.0% |
GGAAAACATGGGGCAAAAGT+GGG | + | chr5_4:32063458-32063477 | Msa0847930:intron | 45.0% | |
GAAAACATGGGGCAAAAGTG+GGG | + | chr5_4:32063459-32063478 | Msa0847930:intron | 45.0% | |
TGACTCGTGATATTGTCGTG+GGG | + | chr5_4:32063511-32063530 | Msa0847930:intron | 45.0% | |
AAGGTCACAAGGACGAATGT+TGG | + | chr5_4:32063782-32063801 | Msa0847930:CDS | 45.0% | |
! | ACATCTAGGGCATCAGTATC+AGG | + | chr5_4:32063847-32063866 | Msa0847930:CDS | 45.0% |
ATGAGTCATGAGTCTCGTGA+CGG | - | chr5_4:32064073-32064092 | None:intergenic | 45.0% | |
GTTGCACTCCTCATTTCCTT+TGG | + | chr5_4:32064163-32064182 | Msa0847930:CDS | 45.0% | |
AGCAACACTACTGATGAGAC+TGG | + | chr5_4:32064254-32064273 | Msa0847930:CDS | 45.0% | |
TGGAAGAATCGCATTTGTCC+AGG | + | chr5_4:32064456-32064475 | Msa0847930:CDS | 45.0% | |
TGTCCAGGTACAAAGAAGCA+CGG | + | chr5_4:32064471-32064490 | Msa0847930:CDS | 45.0% | |
CCACAGTTTGTAAGGCCAAA+GGG | - | chr5_4:32065055-32065074 | None:intergenic | 45.0% | |
!! | CCTTTGGCCTTACAAACTGT+GGG | + | chr5_4:32065053-32065072 | Msa0847930:CDS | 45.0% |
ACCTGTTCCCACAGTTTGTA+AGG | - | chr5_4:32065063-32065082 | None:intergenic | 45.0% | |
GATGTAACTGCTCTGGTAAG+AGG | + | chr5_4:32065127-32065146 | Msa0847930:intron | 45.0% | |
!!! | GGCCTTCAAGCTACTTTTGT+CGG | + | chr5_4:32065322-32065341 | Msa0847930:intron | 45.0% |
TAGCATAACAGCTGCAGTAG+AGG | - | chr5_4:32065514-32065533 | None:intergenic | 45.0% | |
TAATGCAGCACTCCAATGCT+TGG | + | chr5_4:32065532-32065551 | Msa0847930:intron | 45.0% | |
GGTACTTGCATCGTTTCGAA+TGG | - | chr5_4:32065598-32065617 | None:intergenic | 45.0% | |
! | GATAAAGTGCTTAAGGTGCC+TGG | + | chr5_4:32066219-32066238 | Msa0847930:intron | 45.0% |
! | TAAAGTGCTTAAGGTGCCTG+GGG | + | chr5_4:32066221-32066240 | Msa0847930:CDS | 45.0% |
GTTGCCGGAAAACTCAGATT+TGG | - | chr5_4:32066831-32066850 | None:intergenic | 45.0% | |
! | AGACAACTTTTGGGCCCTTA+AGG | + | chr5_4:32067025-32067044 | Msa0847930:intron | 45.0% |
! | TTTTCTGCAGTGGGCCTTAA+GGG | - | chr5_4:32067042-32067061 | None:intergenic | 45.0% |
! | TTTTTCTGCAGTGGGCCTTA+AGG | - | chr5_4:32067043-32067062 | None:intergenic | 45.0% |
AAGGCCCACTGCAGAAAAAT+AGG | + | chr5_4:32067044-32067063 | Msa0847930:intron | 45.0% | |
AGGCCCACTGCAGAAAAATA+GGG | + | chr5_4:32067045-32067064 | Msa0847930:intron | 45.0% | |
!! | GCTCCCTATTTTTCTGCAGT+GGG | - | chr5_4:32067051-32067070 | None:intergenic | 45.0% |
!! | AGCTCCCTATTTTTCTGCAG+TGG | - | chr5_4:32067052-32067071 | None:intergenic | 45.0% |
TTTAAAGAATCGTGGGGGTG+GGG | - | chr5_4:32067083-32067102 | None:intergenic | 45.0% | |
!!! | GTTTTAAAGAATCGTGGGGG+TGG | - | chr5_4:32067085-32067104 | None:intergenic | 45.0% |
!!! | GCGGTTTTAAAGAATCGTGG+GGG | - | chr5_4:32067088-32067107 | None:intergenic | 45.0% |
!!! | CAGTTTTTTCCCTGTCCAGA+TGG | - | chr5_4:32067127-32067146 | None:intergenic | 45.0% |
ACACTTAGTGGGATAAGGCT+TGG | - | chr5_4:32067381-32067400 | None:intergenic | 45.0% | |
GTGCTATATCGTCACTGCAA+CGG | + | chr5_4:32067573-32067592 | Msa0847930:intron | 45.0% | |
! | CACTATGGCATAGCGGAATT+TGG | - | chr5_4:32067653-32067672 | None:intergenic | 45.0% |
CAAATTCCGCTATGCCATAG+TGG | + | chr5_4:32067651-32067670 | Msa0847930:intron | 45.0% | |
GCTATACCACTATGGCATAG+CGG | - | chr5_4:32067660-32067679 | None:intergenic | 45.0% | |
CATGACTCGTGTCATGTGTA+AGG | - | chr5_4:32067719-32067738 | None:intergenic | 45.0% | |
CTTACACATGACACGAGTCA+TGG | + | chr5_4:32067717-32067736 | Msa0847930:intron | 45.0% | |
! | TGACACGAGTCATGGCTTTT+TGG | + | chr5_4:32067725-32067744 | Msa0847930:intron | 45.0% |
CTTAACCAACTCCACCTAGT+AGG | + | chr5_4:32067762-32067781 | Msa0847930:intron | 45.0% | |
AGGGTCATAAACCTCTTGGA+AGG | + | chr5_4:32068049-32068068 | Msa0847930:intron | 45.0% | |
TTCTATCAAAGCCCGGAAGT+AGG | - | chr5_4:32068190-32068209 | None:intergenic | 45.0% | |
GACAGGATTCTATCAAAGCC+CGG | - | chr5_4:32068197-32068216 | None:intergenic | 45.0% | |
AATTTGGGGAAAGAATGCCG+TGG | + | chr5_4:32068317-32068336 | Msa0847930:intron | 45.0% | |
ATGCCGTGGAATCTTGTGAT+TGG | + | chr5_4:32068331-32068350 | Msa0847930:intron | 45.0% | |
CAGCCAATCACAAGATTCCA+CGG | - | chr5_4:32068337-32068356 | None:intergenic | 45.0% | |
! | AATGTTTAGAGGGGCACACA+TGG | + | chr5_4:32068617-32068636 | Msa0847930:intron | 45.0% |
TCCATCTTCCCTATGCAAGT+GGG | - | chr5_4:32068771-32068790 | None:intergenic | 45.0% | |
GAGTCATATCCAGGACTTCA+GGG | - | chr5_4:32069264-32069283 | None:intergenic | 45.0% | |
TTATGCAGTGGTCGTCCATT+TGG | + | chr5_4:32069327-32069346 | Msa0847930:CDS | 45.0% | |
! | TTGCTACTTACTGAACCCAG+GGG | - | chr5_4:32070326-32070345 | None:intergenic | 45.0% |
! | CATTGCTACTTACTGAACCC+AGG | - | chr5_4:32070328-32070347 | None:intergenic | 45.0% |
CGTCTTAGAAACAGCAGGAA+TGG | - | chr5_4:32070393-32070412 | None:intergenic | 45.0% | |
!! | TTCCTGCTGTTTCTAAGACG+CGG | + | chr5_4:32070393-32070412 | Msa0847930:CDS | 45.0% |
AGGAATCATCAACGGCATTC+CGG | - | chr5_4:32070484-32070503 | None:intergenic | 45.0% | |
TCGGGGAAGAAATACTATGG+TGG | + | chr5_4:32070547-32070566 | Msa0847930:CDS | 45.0% | |
CAGTGGACAATGATGCTGAT+AGG | + | chr5_4:32070768-32070787 | Msa0847930:CDS | 45.0% | |
TGGACAATGATGCTGATAGG+AGG | + | chr5_4:32070771-32070790 | Msa0847930:CDS | 45.0% | |
CTTTATCTTCCGAGTCTTGC+TGG | - | chr5_4:32070799-32070818 | None:intergenic | 45.0% | |
!! | TTATATTATTATCTTATTAT+TGG | - | chr5_4:32067271-32067290 | None:intergenic | 5.0% |
!! | AAAATAATATATTTATCAAA+TGG | - | chr5_4:32068367-32068386 | None:intergenic | 5.0% |
!!! | GATAAATATATTATTTTATT+AGG | + | chr5_4:32068370-32068389 | Msa0847930:intron | 5.0% |
TTTCCGTGGATCCTGTGTTG+GGG | + | chr5_4:32062645-32062664 | Msa0847930:five_prime_UTR | 50.0% | |
!! | TTCCGGATTGAGGGTTTTGG+AGG | + | chr5_4:32063178-32063197 | Msa0847930:intron | 50.0% |
GACCTCCAAAACCCTCAATC+CGG | - | chr5_4:32063183-32063202 | None:intergenic | 50.0% | |
CGGCCAGCAGCAAATATCAT+TGG | - | chr5_4:32063406-32063425 | None:intergenic | 50.0% | |
GGGAAAACATGGGGCAAAAG+TGG | + | chr5_4:32063457-32063476 | Msa0847930:intron | 50.0% | |
TCACTGGAGACAAGGTCACA+AGG | + | chr5_4:32063771-32063790 | Msa0847930:CDS | 50.0% | |
CAACACAGTTCCGTCGTTGT+CGG | - | chr5_4:32064147-32064166 | None:intergenic | 50.0% | |
! | GATGAGGCATCAAAGTTGGG+TGG | + | chr5_4:32064320-32064339 | Msa0847930:CDS | 50.0% |
! | TGATGTTCTAGCTGACGACG+TGG | + | chr5_4:32064436-32064455 | Msa0847930:CDS | 50.0% |
TCTCCGTGCTTCTTTGTACC+TGG | - | chr5_4:32064477-32064496 | None:intergenic | 50.0% | |
!! | CCCTTTGGCCTTACAAACTG+TGG | + | chr5_4:32065052-32065071 | Msa0847930:CDS | 50.0% |
CCCACAGTTTGTAAGGCCAA+AGG | - | chr5_4:32065056-32065075 | None:intergenic | 50.0% | |
GCCTTACAAACTGTGGGAAC+AGG | + | chr5_4:32065059-32065078 | Msa0847930:CDS | 50.0% | |
GCTGAGTATACGCCAAGCAT+TGG | - | chr5_4:32065547-32065566 | None:intergenic | 50.0% | |
CAATAGGTCAGAAGAGGGGA+TGG | + | chr5_4:32065692-32065711 | Msa0847930:intron | 50.0% | |
TCATCTTGGACATGGGAGAG+AGG | + | chr5_4:32065816-32065835 | Msa0847930:CDS | 50.0% | |
CATACCTCTCAGATTTCCCC+AGG | - | chr5_4:32066240-32066259 | None:intergenic | 50.0% | |
! | GAAACTTTGGAGGAGGCTCT+TGG | + | chr5_4:32066301-32066320 | Msa0847930:CDS | 50.0% |
TTTCATCCCCTCTTCCAGAG+CGG | - | chr5_4:32066772-32066791 | None:intergenic | 50.0% | |
TTAAAGAATCGTGGGGGTGG+GGG | - | chr5_4:32067082-32067101 | None:intergenic | 50.0% | |
CTGCTATCCCAATCTCGGAT+CGG | + | chr5_4:32067458-32067477 | Msa0847930:intron | 50.0% | |
AAACCAGCCGATCCGAGATT+GGG | - | chr5_4:32067468-32067487 | None:intergenic | 50.0% | |
TAAACCAGCCGATCCGAGAT+TGG | - | chr5_4:32067469-32067488 | None:intergenic | 50.0% | |
!! | CGTGGACTAGTACCTACTTC+CGG | + | chr5_4:32068175-32068194 | Msa0847930:intron | 50.0% |
!! | GTGGACTAGTACCTACTTCC+GGG | + | chr5_4:32068176-32068195 | Msa0847930:intron | 50.0% |
ACCCACTTGCATAGGGAAGA+TGG | + | chr5_4:32068767-32068786 | Msa0847930:intron | 50.0% | |
GTCCATCTTCCCTATGCAAG+TGG | - | chr5_4:32068772-32068791 | None:intergenic | 50.0% | |
AGTTCAGTTCCCTGAAGTCC+TGG | + | chr5_4:32069252-32069271 | Msa0847930:CDS | 50.0% | |
GGAGTCATATCCAGGACTTC+AGG | - | chr5_4:32069265-32069284 | None:intergenic | 50.0% | |
GTTCAGGACTGATGACAGCA+GGG | + | chr5_4:32069414-32069433 | Msa0847930:CDS | 50.0% | |
GCAAGGTAATGATGCTGCAG+AGG | + | chr5_4:32070191-32070210 | Msa0847930:intron | 50.0% | |
! | CTTACTGAACCCAGGGGTTT+TGG | - | chr5_4:32070320-32070339 | None:intergenic | 50.0% |
TAAGACGCGGTCGAATTCCA+TGG | + | chr5_4:32070406-32070425 | Msa0847930:CDS | 50.0% | |
CTTATCCTGGTCCCCAACAC+AGG | - | chr5_4:32062659-32062678 | None:intergenic | 55.0% | |
CGAGCACAACGCATGGTAGT+AGG | - | chr5_4:32062973-32062992 | None:intergenic | 55.0% | |
TTTGCAGCGAGCACAACGCA+TGG | - | chr5_4:32062980-32062999 | None:intergenic | 55.0% | |
!! | GTAATGGGCGTGGTGCCATT+AGG | + | chr5_4:32063099-32063118 | Msa0847930:intron | 55.0% |
TTGCTGCTGGCCGGAAAACA+TGG | + | chr5_4:32063413-32063432 | Msa0847930:intron | 55.0% | |
TGCTGCTGGCCGGAAAACAT+GGG | + | chr5_4:32063414-32063433 | Msa0847930:intron | 55.0% | |
TGGGGCAAGAAATTTGCCGC+TGG | + | chr5_4:32063433-32063452 | Msa0847930:intron | 55.0% | |
GGCAAGAAATTTGCCGCTGG+CGG | + | chr5_4:32063436-32063455 | Msa0847930:intron | 55.0% | |
GCAAGAAATTTGCCGCTGGC+GGG | + | chr5_4:32063437-32063456 | Msa0847930:intron | 55.0% | |
GCCTTCGATTACCACCACCA+GGG | + | chr5_4:32063804-32063823 | Msa0847930:CDS | 55.0% | |
!! | TCCCTGGTGGTGGTAATCGA+AGG | - | chr5_4:32063808-32063827 | None:intergenic | 55.0% |
TTCGATTACCACCACCAGGG+AGG | + | chr5_4:32063807-32063826 | Msa0847930:CDS | 55.0% | |
ATTCTCGTCGTTGACCTCCC+TGG | - | chr5_4:32063824-32063843 | None:intergenic | 55.0% | |
GTAGCTTCCACCGACAACGA+CGG | + | chr5_4:32064134-32064153 | Msa0847930:CDS | 55.0% | |
CTCAACTGCACCCCTGTTGA+TGG | - | chr5_4:32065968-32065987 | None:intergenic | 55.0% | |
TAGCGCTCCCACTCTTGATG+CGG | - | chr5_4:32066689-32066708 | None:intergenic | 55.0% | |
TGTGCAGTTTGCGCCCATAG+CGG | + | chr5_4:32066736-32066755 | Msa0847930:CDS | 55.0% | |
CCAGATCTGCTCGTTCTGTG+CGG | + | chr5_4:32066870-32066889 | Msa0847930:CDS | 55.0% | |
TGTGGCTGCTATGCTGTGTG+CGG | + | chr5_4:32066905-32066924 | Msa0847930:intron | 55.0% | |
TTGTGGCTGCTCGTTGTGTG+TGG | + | chr5_4:32066958-32066977 | Msa0847930:intron | 55.0% | |
TAAAGAATCGTGGGGGTGGG+GGG | - | chr5_4:32067081-32067100 | None:intergenic | 55.0% | |
TGGGCAAATCCGGAAGGAAG+CGG | - | chr5_4:32067107-32067126 | None:intergenic | 55.0% | |
TCCTTCCGGATTTGCCCATC+TGG | + | chr5_4:32067109-32067128 | Msa0847930:intron | 55.0% | |
TCCAGATGGGCAAATCCGGA+AGG | - | chr5_4:32067113-32067132 | None:intergenic | 55.0% | |
CCTGTCCAGATGGGCAAATC+CGG | - | chr5_4:32067117-32067136 | None:intergenic | 55.0% | |
CGGATTTGCCCATCTGGACA+GGG | + | chr5_4:32067115-32067134 | Msa0847930:intron | 55.0% | |
CGATCCGAGATTGGGATAGC+AGG | - | chr5_4:32067460-32067479 | None:intergenic | 55.0% | |
TATCCCAATCTCGGATCGGC+TGG | + | chr5_4:32067462-32067481 | Msa0847930:intron | 55.0% | |
GGTTCAGGACTGATGACAGC+AGG | + | chr5_4:32069413-32069432 | Msa0847930:CDS | 55.0% | |
!! | CTCATTTTAGGGGGGAGGAG+TGG | - | chr5_4:32069487-32069506 | None:intergenic | 55.0% |
AGGCACTCTCCAAAACCCCT+GGG | + | chr5_4:32070308-32070327 | Msa0847930:intron | 55.0% | |
GACCGCGTCTTAGAAACAGC+AGG | - | chr5_4:32070398-32070417 | None:intergenic | 55.0% | |
CTGTCCCTGCTTCTGCTGTA+CGG | - | chr5_4:32070453-32070472 | None:intergenic | 55.0% | |
TTGGTGAGGCAGGGTCCAAT+TGG | + | chr5_4:32070675-32070694 | Msa0847930:CDS | 55.0% | |
TCCAATTGGCACGGCCAGTA+TGG | + | chr5_4:32070689-32070708 | Msa0847930:CDS | 55.0% | |
TCCATACTGGCCGTGCCAAT+TGG | - | chr5_4:32070693-32070712 | None:intergenic | 55.0% | |
GGAAGAAGATGCAGCCGAGT+TGG | - | chr5_4:32070723-32070742 | None:intergenic | 55.0% | |
TAGGAGGCTCCAGCAAGACT+CGG | + | chr5_4:32070787-32070806 | Msa0847930:CDS | 55.0% | |
GGTCCCCAACACAGGATCCA+CGG | - | chr5_4:32062651-32062670 | None:intergenic | 60.0% | |
TGGATCCTGTGTTGGGGACC+AGG | + | chr5_4:32062651-32062670 | Msa0847930:five_prime_UTR | 60.0% | |
GCTGCTGGCCGGAAAACATG+GGG | + | chr5_4:32063415-32063434 | Msa0847930:intron | 60.0% | |
TTGCCGCTGGCGGGAAAACA+TGG | + | chr5_4:32063446-32063465 | Msa0847930:intron | 60.0% | |
TGCCGCTGGCGGGAAAACAT+GGG | + | chr5_4:32063447-32063466 | Msa0847930:intron | 60.0% | |
GGCCTTCGATTACCACCACC+AGG | + | chr5_4:32063803-32063822 | Msa0847930:CDS | 60.0% | |
CACAGTTCCGTCGTTGTCGG+TGG | - | chr5_4:32064144-32064163 | None:intergenic | 60.0% | |
GGTGCCTGGGGAAATCTGAG+AGG | + | chr5_4:32066233-32066252 | Msa0847930:CDS | 60.0% | |
TTGCGCCCCGCATCAAGAGT+GGG | + | chr5_4:32066679-32066698 | Msa0847930:CDS | 60.0% | |
AGCGCTCCCACTCTTGATGC+GGG | - | chr5_4:32066688-32066707 | None:intergenic | 60.0% | |
!! | AAGAGTGGGAGCGCTACACC+AGG | + | chr5_4:32066693-32066712 | Msa0847930:CDS | 60.0% |
CGCTACACCAGGCTTCTCAG+CGG | + | chr5_4:32066704-32066723 | Msa0847930:CDS | 60.0% | |
GCTACACCAGGCTTCTCAGC+GGG | + | chr5_4:32066705-32066724 | Msa0847930:CDS | 60.0% | |
ACCAGGCTTCTCAGCGGGAA+TGG | + | chr5_4:32066710-32066729 | Msa0847930:CDS | 60.0% | |
!! | ACAAGGGCCGCTCTGGAAGA+GGG | + | chr5_4:32066762-32066781 | Msa0847930:CDS | 60.0% |
CCGCACAGAACGAGCAGATC+TGG | - | chr5_4:32066873-32066892 | None:intergenic | 60.0% | |
!! | GTGCGGCTGCTTGTTGTCTG+TGG | + | chr5_4:32066887-32066906 | Msa0847930:CDS | 60.0% |
AAAGAATCGTGGGGGTGGGG+GGG | - | chr5_4:32067080-32067099 | None:intergenic | 60.0% | |
CCGGATTTGCCCATCTGGAC+AGG | + | chr5_4:32067114-32067133 | Msa0847930:intron | 60.0% | |
!!! | CAGGGGTTTTGGAGAGTGCC+TGG | - | chr5_4:32070309-32070328 | None:intergenic | 60.0% |
CAGGCACTCTCCAAAACCCC+TGG | + | chr5_4:32070307-32070326 | Msa0847930:intron | 60.0% | |
TCCCTCCGTACAGCAGAAGC+AGG | + | chr5_4:32070445-32070464 | Msa0847930:CDS | 60.0% | |
CCCTGCTTCTGCTGTACGGA+GGG | - | chr5_4:32070449-32070468 | None:intergenic | 60.0% | |
CCCTCCGTACAGCAGAAGCA+GGG | + | chr5_4:32070446-32070465 | Msa0847930:CDS | 60.0% | |
TCCCTGCTTCTGCTGTACGG+AGG | - | chr5_4:32070450-32070469 | None:intergenic | 60.0% | |
AGCAGGGACAGCACTCTCAC+CGG | + | chr5_4:32070462-32070481 | Msa0847930:CDS | 60.0% | |
GAGGCAGGGTCCAATTGGCA+CGG | + | chr5_4:32070680-32070699 | Msa0847930:CDS | 60.0% | |
!! | GGGCGTGGTGCCATTAGGCT+AGG | + | chr5_4:32063104-32063123 | Msa0847930:intron | 65.0% |
GCCGCTGGCGGGAAAACATG+GGG | + | chr5_4:32063448-32063467 | Msa0847930:intron | 65.0% | |
! | GCCCCATGTTTTCCCGCCAG+CGG | - | chr5_4:32063452-32063471 | None:intergenic | 65.0% |
GTCGTTGACCTCCCTGGTGG+TGG | - | chr5_4:32063818-32063837 | None:intergenic | 65.0% | |
CTCGTCGTTGACCTCCCTGG+TGG | - | chr5_4:32063821-32063840 | None:intergenic | 65.0% | |
CTCTTGATGCGGGGCGCAAC+TGG | - | chr5_4:32066678-32066697 | None:intergenic | 65.0% | |
GTTGCGCCCCGCATCAAGAG+TGG | + | chr5_4:32066678-32066697 | Msa0847930:CDS | 65.0% | |
GCGCTCCCACTCTTGATGCG+GGG | - | chr5_4:32066687-32066706 | None:intergenic | 65.0% | |
GCCATTCCCGCTGAGAAGCC+TGG | - | chr5_4:32066714-32066733 | None:intergenic | 65.0% | |
!! | CACAAGGGCCGCTCTGGAAG+AGG | + | chr5_4:32066761-32066780 | Msa0847930:CDS | 65.0% |
!! | CAAGGGCCGCTCTGGAAGAG+GGG | + | chr5_4:32066763-32066782 | Msa0847930:CDS | 65.0% |
GCGGCGCAACGGAGTGATCG+TGG | - | chr5_4:32066629-32066648 | None:intergenic | 70.0% | |
CGATCACTCCGTTGCGCCGC+AGG | + | chr5_4:32066629-32066648 | Msa0847930:CDS | 70.0% | |
TCCGTTGCGCCGCAGGACAG+TGG | + | chr5_4:32066636-32066655 | Msa0847930:CDS | 70.0% | |
GCCACTGTCCTGCGGCGCAA+CGG | - | chr5_4:32066640-32066659 | None:intergenic | 70.0% | |
TTGCGCCGCAGGACAGTGGC+TGG | + | chr5_4:32066640-32066659 | Msa0847930:CDS | 70.0% | |
! | GGCGCAACTGGCTTCACCGG+CGG | - | chr5_4:32066666-32066685 | None:intergenic | 70.0% |
! | CGGGGCGCAACTGGCTTCAC+CGG | - | chr5_4:32066669-32066688 | None:intergenic | 70.0% |
TGCGCCCATAGCGGCGCACA+AGG | + | chr5_4:32066745-32066764 | Msa0847930:CDS | 70.0% | |
GCGCCCATAGCGGCGCACAA+GGG | + | chr5_4:32066746-32066765 | Msa0847930:CDS | 70.0% | |
CGGCCCTTGTGCGCCGCTAT+GGG | - | chr5_4:32066752-32066771 | None:intergenic | 70.0% | |
GGCGGCCAGCCACTGTCCTG+CGG | - | chr5_4:32066648-32066667 | None:intergenic | 75.0% | |
! | GCAGGACAGTGGCTGGCCGC+CGG | + | chr5_4:32066647-32066666 | Msa0847930:CDS | 75.0% |
GCGGCCCTTGTGCGCCGCTA+TGG | - | chr5_4:32066753-32066772 | None:intergenic | 75.0% | |
! | GCGGCGCACAAGGGCCGCTC+TGG | + | chr5_4:32066755-32066774 | Msa0847930:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 32062470 | 32071241 | 32062470 | ID=Msa0847930;Name=Msa0847930 |
chr5_4 | mRNA | 32062470 | 32071241 | 32062470 | ID=Msa0847930-mRNA-1;Parent=Msa0847930;Name=Msa0847930-mRNA-1;_AED=0.11;_eAED=0.13;_QI=224|0.58|0.69|0.92|1|1|13|274|1008 |
chr5_4 | exon | 32062470 | 32063013 | 32062470 | ID=Msa0847930-mRNA-1:exon:11209;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32063750 | 32063889 | 32063750 | ID=Msa0847930-mRNA-1:exon:11210;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32063976 | 32064667 | 32063976 | ID=Msa0847930-mRNA-1:exon:11211;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32064992 | 32065080 | 32064992 | ID=Msa0847930-mRNA-1:exon:11212;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32065540 | 32065612 | 32065540 | ID=Msa0847930-mRNA-1:exon:11213;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32065748 | 32065860 | 32065748 | ID=Msa0847930-mRNA-1:exon:11214;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32065975 | 32066089 | 32065975 | ID=Msa0847930-mRNA-1:exon:11215;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32066220 | 32066377 | 32066220 | ID=Msa0847930-mRNA-1:exon:11216;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32066613 | 32066921 | 32066613 | ID=Msa0847930-mRNA-1:exon:11217;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32069026 | 32069110 | 32069026 | ID=Msa0847930-mRNA-1:exon:11218;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32069223 | 32069435 | 32069223 | ID=Msa0847930-mRNA-1:exon:11219;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32070134 | 32070195 | 32070134 | ID=Msa0847930-mRNA-1:exon:11220;Parent=Msa0847930-mRNA-1 |
chr5_4 | exon | 32070310 | 32071241 | 32070310 | ID=Msa0847930-mRNA-1:exon:11221;Parent=Msa0847930-mRNA-1 |
chr5_4 | five_prime_UTR | 32062470 | 32062693 | 32062470 | ID=Msa0847930-mRNA-1:five_prime_utr;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32062694 | 32063013 | 32062694 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32063750 | 32063889 | 32063750 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32063976 | 32064667 | 32063976 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32064992 | 32065080 | 32064992 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32065540 | 32065612 | 32065540 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32065748 | 32065860 | 32065748 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32065975 | 32066089 | 32065975 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32066220 | 32066377 | 32066220 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32066613 | 32066921 | 32066613 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32069026 | 32069110 | 32069026 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32069223 | 32069435 | 32069223 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32070134 | 32070195 | 32070134 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | CDS | 32070310 | 32070967 | 32070310 | ID=Msa0847930-mRNA-1:cds;Parent=Msa0847930-mRNA-1 |
chr5_4 | three_prime_UTR | 32070968 | 32071241 | 32070968 | ID=Msa0847930-mRNA-1:three_prime_utr;Parent=Msa0847930-mRNA-1 |
Gene Sequence |
Protein sequence |