AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0724460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724460 MtrunA17_Chr5g0415641 63.598 239 85 1 4 242 1 237 2.93e-110 317
Msa0724460 MtrunA17_Chr8g0362831 58.547 234 95 1 13 246 12 243 1.52e-94 278
Msa0724460 MtrunA17_Chr8g0363491 58.621 232 94 1 13 244 12 241 2.89e-94 277
Msa0724460 MtrunA17_Chr8g0362921 58.190 232 95 1 13 244 13 242 2.38e-93 275
Msa0724460 MtrunA17_Chr5g0415571 63.317 199 70 1 7 202 2 200 6.57e-92 269
Msa0724460 MtrunA17_Chr8g0362611 53.219 233 105 2 3 235 5 233 6.70e-86 257
Msa0724460 MtrunA17_Chr5g0415611 54.508 244 103 4 2 242 4 242 8.64e-86 256
Msa0724460 MtrunA17_Chr5g0415631 56.306 222 94 2 13 234 16 234 9.13e-84 250
Msa0724460 MtrunA17_Chr8g0362601 53.275 229 103 2 7 235 9 233 3.66e-83 251
Msa0724460 MtrunA17_Chr5g0415581 58.416 202 79 2 10 211 13 209 1.83e-78 236
Msa0724460 MtrunA17_Chr3g0102221 61.074 149 57 1 12 159 14 162 3.30e-66 202
Msa0724460 MtrunA17_Chr3g0102251 53.933 178 81 1 13 189 15 192 7.73e-66 205
Msa0724460 MtrunA17_Chr2g0298531 51.500 200 92 2 5 199 10 209 1.31e-63 214
Msa0724460 MtrunA17_Chr3g0102131 53.030 198 89 2 12 205 14 211 1.61e-63 214
Msa0724460 MtrunA17_Chr3g0102261 52.284 197 90 2 13 205 15 211 1.34e-62 211
Msa0724460 MtrunA17_Chr3g0102281 55.307 179 79 1 12 189 14 192 5.96e-62 209
Msa0724460 MtrunA17_Chr8g0382341 49.500 200 96 3 13 211 35 230 5.97e-62 197
Msa0724460 MtrunA17_Chr2g0298291 50.500 200 89 3 5 199 10 204 8.39e-62 209
Msa0724460 MtrunA17_Chr3g0102121 53.093 194 87 2 13 202 15 208 8.42e-62 209
Msa0724460 MtrunA17_Chr8g0342791 56.322 174 76 0 17 190 8 181 8.14e-61 206
Msa0724460 MtrunA17_Chr4g0020591 58.929 168 68 1 18 185 18 184 7.40e-60 203
Msa0724460 MtrunA17_Chr3g0102271 54.749 179 80 1 12 189 14 192 7.57e-60 203
Msa0724460 MtrunA17_Chr8g0342741 45.685 197 104 1 12 205 3 199 2.17e-59 196
Msa0724460 MtrunA17_Chr3g0102171 53.631 179 82 1 12 189 14 192 4.14e-59 201
Msa0724460 MtrunA17_Chr4g0018431 49.519 208 97 4 13 213 17 223 1.50e-58 200
Msa0724460 MtrunA17_Chr5g0439951 49.733 187 89 1 9 190 9 195 4.17e-58 198
Msa0724460 MtrunA17_Chr1g0172831 56.287 167 72 1 17 182 18 184 1.13e-57 195
Msa0724460 MtrunA17_Chr3g0119001 49.754 203 94 4 18 213 24 225 3.09e-57 196
Msa0724460 MtrunA17_Chr8g0343681 45.098 204 110 1 2 205 32 233 4.43e-57 188
Msa0724460 MtrunA17_Chr3g0119591 55.422 166 72 2 17 181 12 176 9.51e-57 186
Msa0724460 MtrunA17_Chr1g0172811 55.689 167 73 1 17 182 18 184 2.27e-56 194
Msa0724460 MtrunA17_Chr8g0350121 53.143 175 77 2 17 189 15 186 2.35e-56 185
Msa0724460 MtrunA17_Chr3g0118981 50.526 190 88 3 18 202 24 212 2.83e-56 193
Msa0724460 MtrunA17_Chr8g0342691 49.171 181 89 1 12 189 3 183 7.63e-56 192
Msa0724460 MtrunA17_Chr8g0342781 47.541 183 93 1 12 191 3 185 2.29e-55 186
Msa0724460 MtrunA17_Chr8g0342641 51.397 179 82 1 17 190 8 186 5.15e-55 189
Msa0724460 MtrunA17_Chr8g0342161 51.124 178 77 4 14 185 14 187 6.80e-55 180
Msa0724460 MtrunA17_Chr3g0104861 53.488 172 77 1 9 180 9 177 9.66e-55 187
Msa0724460 MtrunA17_Chr3g0119601 56.627 166 70 2 17 181 12 176 5.85e-54 187
Msa0724460 MtrunA17_Chr8g0350091 49.721 179 85 2 13 189 9 184 7.01e-54 179
Msa0724460 MtrunA17_Chr8g0343631 46.190 210 104 3 1 204 18 224 6.00e-53 184
Msa0724460 MtrunA17_Chr8g0342911 47.826 184 93 1 9 189 19 202 6.31e-53 184
Msa0724460 MtrunA17_Chr6g0454971 47.980 198 101 2 17 212 49 246 7.65e-53 183
Msa0724460 MtrunA17_Chr8g0342621 51.685 178 81 2 17 189 8 185 8.06e-53 183
Msa0724460 MtrunA17_Chr8g0348541 54.491 167 74 2 16 181 23 188 8.59e-53 183
Msa0724460 MtrunA17_Chr6g0455251 52.695 167 78 1 17 182 26 192 2.91e-51 179
Msa0724460 MtrunA17_Chr3g0081531 45.178 197 106 2 17 212 7 202 5.11e-51 178
Msa0724460 MtrunA17_Chr2g0302011 44.175 206 108 3 4 204 21 224 1.93e-50 171
Msa0724460 MtrunA17_Chr4g0005351 46.328 177 93 1 6 182 80 254 6.44e-50 168
Msa0724460 MtrunA17_Chr8g0342201 49.153 177 83 3 12 183 46 220 7.15e-50 173
Msa0724460 MtrunA17_Chr8g0343671 45.050 202 108 2 4 205 44 242 1.53e-49 174
Msa0724460 MtrunA17_Chr8g0353001 50.526 190 89 3 4 189 1 189 1.97e-49 173
Msa0724460 MtrunA17_Chr8g0372681 46.561 189 96 3 4 189 1 187 2.72e-49 173
Msa0724460 MtrunA17_Chr6g0479631 47.126 174 87 3 17 186 18 190 3.94e-49 172
Msa0724460 MtrunA17_Chr8g0338831 48.333 180 87 2 13 186 10 189 4.92e-49 164
Msa0724460 MtrunA17_Chr6g0482511 46.774 186 96 3 2 184 17 202 5.26e-49 172
Msa0724460 MtrunA17_Chr6g0454961 46.429 196 93 5 16 206 43 231 6.91e-49 172
Msa0724460 MtrunA17_Chr5g0443781 55.319 141 62 1 18 157 150 290 8.73e-49 163
Msa0724460 MtrunA17_Chr2g0296471 45.312 192 96 4 4 186 1 192 1.22e-48 159
Msa0724460 MtrunA17_Chr2g0330131 50.000 158 78 1 4 161 1 157 2.11e-48 157
Msa0724460 MtrunA17_Chr8g0351551 50.794 189 80 4 4 185 3 185 2.85e-48 170
Msa0724460 MtrunA17_Chr6g0455551 49.405 168 84 1 16 182 46 213 3.22e-48 170
Msa0724460 MtrunA17_Chr6g0479701 48.555 173 84 3 17 184 22 194 4.20e-48 170
Msa0724460 MtrunA17_Chr2g0300251 44.560 193 102 3 18 205 19 211 6.87e-48 169
Msa0724460 MtrunA17_Chr4g0005401 46.893 177 92 1 6 182 16 190 7.70e-48 169
Msa0724460 MtrunA17_Chr6g0479731 51.163 172 78 4 17 184 18 187 8.81e-48 167
Msa0724460 MtrunA17_Chr6g0455211 48.889 180 77 4 17 182 39 217 9.59e-48 169
Msa0724460 MtrunA17_Chr8g0354711 46.199 171 90 2 13 182 5 174 1.25e-47 168
Msa0724460 MtrunA17_Chr4g0041241 49.123 171 85 2 14 183 19 188 1.31e-47 168
Msa0724460 MtrunA17_Chr5g0443861 49.697 165 81 2 14 177 378 541 1.33e-47 165
Msa0724460 MtrunA17_Chr6g0481141 43.415 205 104 5 16 214 68 266 1.79e-47 168
Msa0724460 MtrunA17_Chr4g0041231 48.538 171 86 2 14 183 19 188 1.90e-47 168
Msa0724460 MtrunA17_Chr6g0479641 47.953 171 85 2 16 182 17 187 2.14e-47 168
Msa0724460 MtrunA17_Chr2g0298301 57.377 122 51 1 5 125 10 131 2.72e-47 153
Msa0724460 MtrunA17_Chr5g0443751 46.857 175 91 2 17 190 329 502 4.58e-47 162
Msa0724460 MtrunA17_Chr4g0041611 45.876 194 100 3 17 206 20 212 4.78e-47 167
Msa0724460 MtrunA17_Chr6g0486221 47.568 185 92 3 1 181 1 184 4.79e-47 167
Msa0724460 MtrunA17_Chr6g0455131 47.059 204 93 6 17 206 87 289 4.82e-47 167
Msa0724460 MtrunA17_Chr7g0243021 41.709 199 114 2 7 204 3 200 5.52e-47 159
Msa0724460 MtrunA17_Chr6g0455221 48.108 185 80 5 8 184 2 178 6.30e-47 166
Msa0724460 MtrunA17_Chr8g0343581 45.856 181 96 1 4 184 51 229 6.38e-47 166
Msa0724460 MtrunA17_Chr6g0480521 47.929 169 84 2 16 180 17 185 6.89e-47 166
Msa0724460 MtrunA17_Chr6g0454821 48.851 174 81 2 17 182 41 214 8.71e-47 166
Msa0724460 MtrunA17_Chr6g0478771 45.198 177 93 2 14 186 4 180 8.88e-47 166
Msa0724460 MtrunA17_Chr5g0420331 47.253 182 83 3 7 182 2 176 1.16e-46 166
Msa0724460 MtrunA17_Chr4g0041951 47.191 178 92 2 9 185 70 246 1.41e-46 165
Msa0724460 MtrunA17_Chr6g0479621 47.399 173 86 3 16 184 19 190 1.44e-46 165
Msa0724460 MtrunA17_Chr8g0352221 48.352 182 90 2 4 181 1 182 1.47e-46 165
Msa0724460 MtrunA17_Chr6g0455191 55.944 143 62 1 17 158 317 459 1.94e-46 165
Msa0724460 MtrunA17_Chr6g0455191 46.296 162 84 3 19 178 66 226 1.41e-35 134
Msa0724460 MtrunA17_Chr6g0479051 45.198 177 93 2 14 186 4 180 2.97e-46 164
Msa0724460 MtrunA17_Chr5g0420341 47.514 181 84 3 7 182 2 176 3.09e-46 164
Msa0724460 MtrunA17_Chr5g0443941 50.311 161 78 2 18 177 370 529 3.14e-46 161
Msa0724460 MtrunA17_Chr6g0481001 47.222 180 88 4 16 188 19 198 4.09e-46 164
Msa0724460 MtrunA17_Chr6g0482111 45.856 181 95 3 4 182 1 180 4.63e-46 164
Msa0724460 MtrunA17_Chr7g0242751 41.327 196 113 2 11 205 40 234 5.35e-46 163
Msa0724460 MtrunA17_Chr6g0479821 47.093 172 86 3 18 184 20 191 5.83e-46 164
Msa0724460 MtrunA17_Chr6g0478841 44.068 177 95 2 14 186 4 180 7.71e-46 163
Msa0724460 MtrunA17_Chr8g0371711 45.312 192 101 3 16 205 19 208 7.78e-46 163
Msa0724460 MtrunA17_Chr4g0005101 46.552 174 91 1 11 184 49 220 1.03e-45 163
Msa0724460 MtrunA17_Chr7g0242811 42.857 196 108 3 17 211 43 235 1.04e-45 163
Msa0724460 MtrunA17_Chr7g0242801 45.550 191 101 3 17 205 88 277 1.09e-45 163
Msa0724460 MtrunA17_Chr6g0480271 47.647 170 85 2 17 182 18 187 1.30e-45 162
Msa0724460 MtrunA17_Chr8g0342221 49.020 153 75 1 9 158 12 164 1.68e-45 161
Msa0724460 MtrunA17_Chr6g0480061 48.344 151 73 3 16 161 19 169 1.87e-45 150
Msa0724460 MtrunA17_Chr4g0025831 48.538 171 83 3 16 182 17 186 1.99e-45 162
Msa0724460 MtrunA17_Chr6g0455031 50.299 167 82 1 17 182 30 196 2.25e-45 162
Msa0724460 MtrunA17_Chr6g0454931 47.692 195 70 7 17 184 50 239 2.60e-45 161
Msa0724460 MtrunA17_Chr6g0481221 45.349 172 89 3 16 183 17 187 2.79e-45 159
Msa0724460 MtrunA17_Chr4g0006771 45.604 182 90 4 16 188 18 199 2.90e-45 161
Msa0724460 MtrunA17_Chr6g0480911 42.180 211 116 4 1 205 1 211 3.08e-45 161
Msa0724460 MtrunA17_Chr6g0480451 45.614 171 89 2 16 182 81 251 3.21e-45 161
Msa0724460 MtrunA17_Chr6g0478741 44.633 177 94 2 14 186 4 180 3.68e-45 161
Msa0724460 MtrunA17_Chr6g0480041 45.930 172 86 4 16 182 17 186 3.99e-45 161
Msa0724460 MtrunA17_Chr2g0299851 43.915 189 102 3 4 188 1 189 4.92e-45 161
Msa0724460 MtrunA17_Chr6g0479591 46.632 193 92 4 14 196 15 206 5.47e-45 161
Msa0724460 MtrunA17_Chr5g0443871 48.214 168 81 3 18 184 370 532 6.03e-45 157
Msa0724460 MtrunA17_Chr6g0480091 45.977 174 89 3 17 186 18 190 7.05e-45 155
Msa0724460 MtrunA17_Chr6g0479001 44.068 177 95 2 14 186 4 180 8.28e-45 160
Msa0724460 MtrunA17_Chr8g0339031 46.857 175 88 3 13 182 12 186 1.06e-44 160
Msa0724460 MtrunA17_Chr6g0479671 45.946 185 94 4 6 184 4 188 1.08e-44 160
Msa0724460 MtrunA17_Chr7g0248121 45.550 191 93 3 16 196 19 208 1.50e-44 159
Msa0724460 MtrunA17_Chr5g0444331 46.471 170 89 2 18 186 365 533 1.60e-44 156
Msa0724460 MtrunA17_Chr8g0342131 44.330 194 101 3 17 205 18 209 2.25e-44 159
Msa0724460 MtrunA17_Chr8g0342671 42.703 185 98 2 17 193 9 193 2.35e-44 159
Msa0724460 MtrunA17_Chr6g0481011 46.111 180 90 4 16 188 22 201 2.67e-44 159
Msa0724460 MtrunA17_Chr6g0479651 44.706 170 90 2 17 182 20 189 4.32e-44 158
Msa0724460 MtrunA17_Chr5g0430531 44.382 178 94 3 14 186 4 181 5.30e-44 153
Msa0724460 MtrunA17_Chr3g0084771 43.605 172 94 3 16 184 14 185 5.91e-44 153
Msa0724460 MtrunA17_Chr5g0443931 48.447 161 81 2 18 177 370 529 6.08e-44 155
Msa0724460 MtrunA17_Chr2g0299881 43.646 181 100 2 4 182 5 185 6.53e-44 158
Msa0724460 MtrunA17_Chr7g0248511 45.789 190 92 3 16 195 25 213 6.61e-44 157
Msa0724460 MtrunA17_Chr4g0025701 46.784 171 86 3 16 182 17 186 1.07e-43 156
Msa0724460 MtrunA17_Chr6g0464011 45.294 170 87 2 14 182 7 171 1.10e-43 149
Msa0724460 MtrunA17_Chr6g0464011 48.413 126 64 1 7 131 179 304 7.68e-35 126
Msa0724460 MtrunA17_Chr7g0256881 42.365 203 113 3 4 205 1 200 1.12e-43 157
Msa0724460 MtrunA17_Chr3g0084731 44.693 179 97 2 1 177 1 179 1.17e-43 157
Msa0724460 MtrunA17_Chr4g0005731 44.199 181 99 1 9 189 2 180 1.56e-43 155
Msa0724460 MtrunA17_Chr4g0010521 50.000 170 83 2 16 184 9 177 1.65e-43 157
Msa0724460 MtrunA17_Chr4g0042011 45.665 173 86 3 14 182 21 189 1.88e-43 156
Msa0724460 MtrunA17_Chr4g0010651 41.079 241 121 7 16 236 10 249 2.13e-43 156
Msa0724460 MtrunA17_Chr8g0354701 40.909 198 108 5 16 205 8 204 2.28e-43 156
Msa0724460 MtrunA17_Chr7g0248521 46.316 190 90 4 16 195 19 206 2.36e-43 156
Msa0724460 MtrunA17_Chr6g0478451 45.087 173 90 3 17 184 20 192 2.74e-43 156
Msa0724460 MtrunA17_Chr2g0299921 44.262 183 94 4 2 182 4 180 2.92e-43 156
Msa0724460 MtrunA17_Chr4g0041441 46.471 170 89 2 17 185 5 173 2.98e-43 156
Msa0724460 MtrunA17_Chr6g0484161 42.453 212 109 4 17 216 18 228 3.73e-43 155
Msa0724460 MtrunA17_Chr6g0486301 47.368 171 88 2 14 183 17 186 3.95e-43 155
Msa0724460 MtrunA17_Chr2g0299561 45.946 185 92 3 4 181 1 184 4.09e-43 155
Msa0724460 MtrunA17_Chr6g0479781 42.029 207 103 6 16 213 15 213 4.19e-43 145
Msa0724460 MtrunA17_Chr6g0486271 47.337 169 87 2 14 181 17 184 4.57e-43 154
Msa0724460 MtrunA17_Chr4g0025811 47.953 171 84 3 16 182 17 186 4.75e-43 155
Msa0724460 MtrunA17_Chr2g0299791 43.094 181 101 2 4 182 1 181 5.24e-43 155
Msa0724460 MtrunA17_Chr6g0480951 42.473 186 97 4 16 191 19 204 7.59e-43 147
Msa0724460 MtrunA17_Chr6g0480311 46.626 163 83 2 24 182 12 174 9.37e-43 154
Msa0724460 MtrunA17_Chr6g0486451 40.500 200 116 2 14 210 17 216 1.30e-42 147
Msa0724460 MtrunA17_Chr4g0025741 46.199 171 87 3 16 182 17 186 1.43e-42 154
Msa0724460 MtrunA17_Chr5g0444051 46.746 169 89 1 17 184 188 356 1.52e-42 147
Msa0724460 MtrunA17_Chr5g0444051 38.372 172 98 3 17 181 15 185 1.93e-33 124
Msa0724460 MtrunA17_Chr6g0480181 46.629 178 87 4 4 177 1 174 1.52e-42 154
Msa0724460 MtrunA17_Chr6g0480461 43.333 180 98 2 7 182 8 187 1.70e-42 154
Msa0724460 MtrunA17_Chr4g0025751 46.199 171 87 3 16 182 17 186 2.74e-42 153
Msa0724460 MtrunA17_Chr6g0480381 41.791 201 104 5 1 188 1 201 2.76e-42 149
Msa0724460 MtrunA17_Chr6g0454851 45.699 186 74 5 17 184 89 265 2.91e-42 153
Msa0724460 MtrunA17_Chr5g0443771 45.062 162 87 2 17 177 225 385 2.97e-42 148
Msa0724460 MtrunA17_Chr3g0084151 50.694 144 67 2 16 158 16 156 4.30e-42 152
Msa0724460 MtrunA17_Chr2g0299841 44.970 169 91 2 16 182 54 222 4.78e-42 152
Msa0724460 MtrunA17_Chr3g0084721 43.316 187 99 4 1 184 6 188 4.93e-42 152
Msa0724460 MtrunA17_Chr8g0370511 45.556 180 86 4 8 182 3 175 5.71e-42 152
Msa0724460 MtrunA17_Chr6g0454951 41.758 182 88 3 17 184 82 259 6.55e-42 152
Msa0724460 MtrunA17_Chr6g0486521 44.624 186 95 3 4 182 1 185 7.46e-42 152
Msa0724460 MtrunA17_Chr4g0005261 42.857 175 98 1 8 182 2 174 1.14e-41 151
Msa0724460 MtrunA17_Chr2g0319821 40.957 188 109 2 19 205 46 232 1.29e-41 151
Msa0724460 MtrunA17_Chr4g0005391 45.783 166 88 1 17 182 62 225 1.55e-41 151
Msa0724460 MtrunA17_Chr6g0485991 46.012 163 87 1 14 175 17 179 1.89e-41 150
Msa0724460 MtrunA17_Chr8g0338901 45.930 172 85 3 17 186 36 201 1.90e-41 150
Msa0724460 MtrunA17_Chr7g0242771 45.752 153 79 2 8 159 7 156 6.73e-41 138
Msa0724460 MtrunA17_Chr1g0146421 43.275 171 92 3 16 182 17 186 8.98e-41 149
Msa0724460 MtrunA17_Chr1g0153511 44.444 180 86 4 4 177 1 172 9.53e-41 149
Msa0724460 MtrunA17_Chr8g0368251 42.775 173 94 3 16 184 17 188 1.20e-40 148
Msa0724460 MtrunA17_Chr3g0084851 44.211 190 96 6 4 184 1 189 1.31e-40 148
Msa0724460 MtrunA17_Chr4g0005871 46.196 184 79 6 17 188 133 308 1.34e-40 148
Msa0724460 MtrunA17_Chr6g0486311 47.853 163 78 2 4 159 1 163 2.24e-40 147
Msa0724460 MtrunA17_Chr5g0443851 49.296 142 71 1 17 157 363 504 2.62e-40 145
Msa0724460 MtrunA17_Chr3g0084841 43.684 190 97 6 4 184 1 189 3.09e-40 147
Msa0724460 MtrunA17_Chr6g0454831 42.574 202 101 6 16 206 8 205 4.30e-40 147
Msa0724460 MtrunA17_Chr8g0354681 44.000 175 89 4 17 182 9 183 6.96e-40 146
Msa0724460 MtrunA17_Chr5g0442761 45.882 170 87 3 16 180 14 183 7.06e-40 146
Msa0724460 MtrunA17_Chr4g0041931 45.882 170 90 2 14 182 20 188 7.45e-40 146
Msa0724460 MtrunA17_Chr4g0005851 44.608 204 93 7 17 206 37 234 1.15e-39 145
Msa0724460 MtrunA17_Chr8g0339021 47.170 159 81 2 25 182 13 169 1.20e-39 145
Msa0724460 MtrunA17_Chr6g0486361 42.703 185 98 3 4 181 1 184 1.32e-39 145
Msa0724460 MtrunA17_Chr8g0343801 40.331 181 105 1 13 190 9 189 1.42e-39 143
Msa0724460 MtrunA17_Chr5g0394051 39.000 200 115 4 17 213 25 220 1.55e-39 140
Msa0724460 MtrunA17_Chr6g0486731 43.787 169 93 2 14 181 17 184 2.09e-39 145
Msa0724460 MtrunA17_Chr3g0085731 42.541 181 94 4 14 186 17 195 2.23e-39 145
Msa0724460 MtrunA17_Chr8g0350801 43.094 181 97 4 14 188 7 187 2.29e-39 145
Msa0724460 MtrunA17_Chr3g0077971 44.706 170 87 4 17 184 10 174 2.57e-39 144
Msa0724460 MtrunA17_Chr6g0482471 44.886 176 93 3 17 188 12 187 3.48e-39 144
Msa0724460 MtrunA17_Chr4g0005291 43.575 179 98 2 5 182 59 235 4.23e-39 144
Msa0724460 MtrunA17_Chr6g0451551 46.835 158 83 1 1 157 3 160 4.46e-39 144
Msa0724460 MtrunA17_Chr6g0451551 40.373 161 93 2 27 184 170 330 8.40e-36 134
Msa0724460 MtrunA17_Chr8g0363871 45.070 142 73 2 18 158 18 155 4.96e-39 133
Msa0724460 MtrunA17_Chr8g0354721 44.048 168 91 3 17 181 9 176 5.45e-39 144
Msa0724460 MtrunA17_Chr3g0085541 44.886 176 92 4 11 181 13 188 9.09e-39 142
Msa0724460 MtrunA17_Chr6g0482411 46.154 143 71 3 17 158 12 149 1.63e-38 132
Msa0724460 MtrunA17_Chr8g0353371 42.077 183 101 3 17 194 11 193 2.24e-38 142
Msa0724460 MtrunA17_Chr8g0352211 44.086 186 95 4 4 181 1 185 3.77e-38 141
Msa0724460 MtrunA17_Chr2g0319851 37.198 207 120 5 5 205 38 240 3.96e-38 141
Msa0724460 MtrunA17_Chr4g0005891 40.455 220 100 7 17 206 27 245 4.74e-38 141
Msa0724460 MtrunA17_Chr7g0255681 41.951 205 112 3 6 203 1005 1209 5.11e-38 141
Msa0724460 MtrunA17_Chr7g0255681 40.000 205 116 3 6 203 503 707 1.60e-35 134
Msa0724460 MtrunA17_Chr7g0255681 36.667 180 102 6 13 188 16 187 2.36e-21 92.8
Msa0724460 MtrunA17_Chr6g0482161 40.588 170 98 2 16 182 12 181 6.83e-38 139
Msa0724460 MtrunA17_Chr6g0486481 47.917 144 74 1 17 159 20 163 9.36e-38 140
Msa0724460 MtrunA17_Chr8g0338881 44.706 170 90 2 17 182 36 205 1.11e-37 140
Msa0724460 MtrunA17_Chr6g0482351 42.077 183 102 3 4 184 1 181 1.14e-37 140
Msa0724460 MtrunA17_Chr8g0339011 42.286 175 91 3 13 186 10 175 1.58e-37 139
Msa0724460 MtrunA17_Chr2g0319921 44.737 152 83 1 9 159 48 199 2.15e-37 139
Msa0724460 MtrunA17_Chr6g0482321 45.029 171 88 4 17 184 12 179 2.26e-37 139
Msa0724460 MtrunA17_Chr5g0414681 41.667 180 78 4 7 159 2 181 4.04e-37 129
Msa0724460 MtrunA17_Chr4g0010711 42.487 193 94 4 6 188 508 693 4.28e-37 138
Msa0724460 MtrunA17_Chr4g0010711 34.211 152 92 3 12 158 11 159 2.55e-21 92.8
Msa0724460 MtrunA17_Chr4g0009241 41.667 180 103 2 4 182 536 714 5.80e-37 138
Msa0724460 MtrunA17_Chr4g0009241 30.120 166 88 7 17 155 19 183 1.03e-11 64.7
Msa0724460 MtrunA17_Chr8g0338981 40.217 184 100 4 13 193 10 186 6.61e-37 137
Msa0724460 MtrunA17_Chr4g0009401 45.455 154 83 1 6 158 494 647 7.79e-37 137
Msa0724460 MtrunA17_Chr4g0005331 39.773 176 94 1 6 181 80 243 8.04e-37 137
Msa0724460 MtrunA17_Chr4g0009171 43.678 174 96 2 10 182 726 898 1.00e-36 137
Msa0724460 MtrunA17_Chr4g0009171 39.881 168 101 0 15 182 5 172 6.35e-32 123
Msa0724460 MtrunA17_Chr1g0172541 43.182 176 91 4 17 188 10 180 1.35e-36 137
Msa0724460 MtrunA17_Chr4g0041941 42.614 176 98 3 12 185 4 178 1.64e-36 136
Msa0724460 MtrunA17_Chr6g0482141 37.313 201 110 3 17 216 18 203 6.41e-36 135
Msa0724460 MtrunA17_Chr4g0009301 47.552 143 74 1 17 158 546 688 9.78e-36 134
Msa0724460 MtrunA17_Chr4g0009301 31.481 162 98 7 6 157 15 173 1.18e-14 73.2
Msa0724460 MtrunA17_Chr4g0009141 40.719 167 98 1 17 182 526 692 2.89e-35 133
Msa0724460 MtrunA17_Chr6g0482441 37.273 220 105 7 14 231 7 195 2.95e-35 133
Msa0724460 MtrunA17_Chr4g0009271 42.500 160 88 3 3 158 11 170 3.44e-35 124
Msa0724460 MtrunA17_Chr4g0009101 37.561 205 121 3 6 203 533 737 8.10e-35 132
Msa0724460 MtrunA17_Chr6g0478991 48.333 120 61 1 14 132 4 123 9.71e-35 121
Msa0724460 MtrunA17_Chr6g0482491 42.391 184 92 7 10 188 2 176 1.22e-34 131
Msa0724460 MtrunA17_Chr6g0455121 51.818 110 53 0 50 159 15 124 2.89e-34 120
Msa0724460 MtrunA17_Chr4g0009041 44.654 159 82 4 4 158 500 656 4.32e-34 129
Msa0724460 MtrunA17_Chr6g0480971 41.333 150 83 3 40 184 31 180 1.50e-33 122
Msa0724460 MtrunA17_Chr7g0223531 40.113 177 95 4 17 182 10 186 2.39e-33 127
Msa0724460 MtrunA17_Chr6g0481331 40.761 184 100 5 3 177 41 224 3.17e-33 127
Msa0724460 MtrunA17_Chr2g0319911 41.781 146 84 1 9 153 39 184 1.55e-32 117
Msa0724460 MtrunA17_Chr6g0480151 39.181 171 95 3 18 182 19 186 2.44e-32 124
Msa0724460 MtrunA17_Chr6g0474761 44.872 156 83 2 5 157 3 158 3.06e-32 124
Msa0724460 MtrunA17_Chr6g0474801 41.667 180 97 4 5 177 3 181 6.46e-32 123
Msa0724460 MtrunA17_Chr8g0353351 46.154 143 73 3 17 157 15 155 3.88e-29 114
Msa0724460 MtrunA17_Chr8g0353361 45.455 143 74 3 17 157 15 155 4.20e-29 114
Msa0724460 MtrunA17_Chr4g0005591 34.783 184 99 4 17 188 78 252 8.02e-28 111
Msa0724460 MtrunA17_Chr6g0454921 56.977 86 36 1 18 102 123 208 1.65e-27 104
Msa0724460 MtrunA17_Chr6g0479831 40.496 121 69 1 40 157 62 182 3.08e-27 104
Msa0724460 MtrunA17_Chr8g0363591 49.057 106 52 1 139 244 1 104 1.68e-26 99.8
Msa0724460 MtrunA17_Chr5g0443951 53.488 86 40 0 50 135 3 88 3.78e-25 96.3
Msa0724460 MtrunA17_Chr5g0443961 49.020 102 49 2 4 104 161 260 3.83e-24 97.8
Msa0724460 MtrunA17_Chr5g0443961 39.815 108 64 1 74 181 63 169 3.23e-21 89.7
Msa0724460 MtrunA17_Chr8g0353401 39.161 143 83 3 17 157 12 152 8.96e-24 99.4
Msa0724460 MtrunA17_Chr8g0363271 50.000 106 51 1 139 244 1 104 1.53e-23 92.0
Msa0724460 MtrunA17_Chr4g0005381 46.053 76 40 1 4 78 77 152 3.06e-16 73.6
Msa0724460 MtrunA17_Chr8g0338851 43.478 92 48 2 95 182 1 92 3.92e-16 77.0
Msa0724460 MtrunA17_Chr5g0443921 56.923 65 27 1 19 82 25 89 1.14e-15 70.5
Msa0724460 MtrunA17_Chr2g0281751 31.214 173 99 6 12 181 8 163 4.04e-15 70.9
Msa0724460 MtrunA17_Chr8g0353431 30.682 176 93 8 15 181 13 168 5.11e-13 68.2
Msa0724460 MtrunA17_Chr4g0047801 30.841 107 69 2 18 123 7 109 2.88e-12 63.2
Msa0724460 MtrunA17_Chr7g0234891 35.537 121 70 4 88 201 1 120 8.31e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724460 AT2G20142.1 47.337 169 84 2 13 181 5 168 6.61e-49 163
Msa0724460 AT1G63880.2 42.079 202 115 1 4 205 1 200 9.15e-45 160
Msa0724460 AT1G63880.1 42.079 202 115 1 4 205 1 200 2.33e-44 159
Msa0724460 AT5G18350.1 45.833 192 98 3 2 190 3 191 2.59e-44 159
Msa0724460 AT1G64070.1 44.330 194 96 3 17 205 14 200 9.35e-44 157
Msa0724460 AT1G63730.1 43.750 208 102 5 4 205 1 199 2.07e-43 157
Msa0724460 AT3G04220.2 41.361 191 107 3 17 205 63 250 2.92e-43 155
Msa0724460 AT3G04220.1 41.361 191 107 3 17 205 63 250 4.38e-43 155
Msa0724460 AT3G04220.3 41.361 191 107 3 17 205 63 250 4.79e-43 155
Msa0724460 AT5G18370.1 39.286 196 117 1 16 211 60 253 3.76e-42 153
Msa0724460 AT1G65850.1 42.781 187 92 4 2 183 21 197 5.31e-42 152
Msa0724460 AT1G72930.1 47.879 165 81 4 17 180 9 169 5.55e-42 141
Msa0724460 AT5G36930.4 45.699 186 94 6 4 186 1 182 7.57e-42 152
Msa0724460 AT5G36930.1 45.699 186 94 6 4 186 1 182 7.57e-42 152
Msa0724460 AT5G36930.2 45.699 186 94 6 4 186 4 185 7.87e-42 152
Msa0724460 AT5G36930.3 45.699 186 94 6 4 186 1 182 8.25e-42 152
Msa0724460 AT5G58120.1 42.268 194 100 3 17 205 15 201 8.44e-42 152
Msa0724460 AT5G41750.1 42.857 203 111 4 4 205 1 199 1.47e-41 151
Msa0724460 AT5G41750.2 42.857 203 111 4 4 205 1 199 1.47e-41 151
Msa0724460 AT4G14370.2 41.237 194 102 3 17 205 14 200 1.88e-41 151
Msa0724460 AT4G14370.3 41.237 194 102 3 17 205 14 200 1.88e-41 151
Msa0724460 AT4G16990.6 47.159 176 87 2 6 181 2 171 2.44e-41 150
Msa0724460 AT4G16990.11 47.159 176 87 2 6 181 2 171 2.44e-41 150
Msa0724460 AT4G16990.1 47.159 176 87 2 6 181 2 171 2.60e-41 150
Msa0724460 AT1G65850.2 43.931 173 85 3 16 183 47 212 2.66e-41 150
Msa0724460 AT1G63860.6 41.951 205 114 2 1 205 1 200 3.54e-41 150
Msa0724460 AT1G63860.2 41.951 205 114 2 1 205 1 200 3.66e-41 150
Msa0724460 AT4G16860.1 46.061 165 87 1 17 181 13 175 3.68e-41 150
Msa0724460 AT1G63860.1 41.951 205 114 2 1 205 1 200 3.75e-41 150
Msa0724460 AT1G63860.4 41.951 205 114 2 1 205 1 200 4.05e-41 150
Msa0724460 AT1G63860.5 41.951 205 114 2 1 205 1 200 4.05e-41 150
Msa0724460 AT1G63860.3 41.951 205 114 2 1 205 1 200 4.05e-41 150
Msa0724460 AT2G16870.1 41.232 211 102 5 4 205 1 198 4.14e-41 150
Msa0724460 AT4G16990.12 47.159 176 87 2 6 181 2 171 4.53e-41 150
Msa0724460 AT4G16990.7 47.159 176 87 2 6 181 2 171 4.53e-41 150
Msa0724460 AT4G16990.17 47.159 176 87 2 6 181 2 171 5.22e-41 149
Msa0724460 AT4G16990.10 47.159 176 87 2 6 181 2 171 5.22e-41 149
Msa0724460 AT4G16990.13 47.159 176 87 2 6 181 2 171 5.39e-41 149
Msa0724460 AT4G16990.2 47.159 176 87 2 6 181 2 171 5.39e-41 149
Msa0724460 AT4G16990.8 47.879 165 84 1 17 181 76 238 8.48e-41 149
Msa0724460 AT1G56520.5 40.952 210 119 3 4 212 1 206 8.75e-41 148
Msa0724460 AT1G56540.1 42.268 194 100 3 17 205 15 201 1.02e-40 149
Msa0724460 AT1G69550.1 44.311 167 91 2 15 181 78 242 1.03e-40 149
Msa0724460 AT1G72860.3 44.444 207 105 5 4 206 1 201 1.05e-40 149
Msa0724460 AT1G72860.1 44.444 207 105 5 4 206 1 201 1.22e-40 149
Msa0724460 AT1G72860.2 44.444 207 105 5 4 206 1 201 1.24e-40 149
Msa0724460 AT4G16920.6 43.478 184 97 2 4 187 1 177 1.71e-40 148
Msa0724460 AT1G56510.1 42.365 203 112 3 4 205 1 199 1.75e-40 148
Msa0724460 AT4G16920.9 43.478 184 97 2 4 187 1 177 1.79e-40 148
Msa0724460 AT1G56520.2 40.952 210 119 3 4 212 1 206 1.84e-40 148
Msa0724460 AT4G16920.1 43.478 184 97 2 4 187 1 177 2.00e-40 148
Msa0724460 AT4G16920.4 43.478 184 97 2 4 187 1 177 2.01e-40 148
Msa0724460 AT4G16920.7 43.478 184 97 2 4 187 1 177 2.01e-40 148
Msa0724460 AT1G56520.4 40.952 210 119 3 4 212 1 206 2.19e-40 148
Msa0724460 AT1G56520.1 40.952 210 119 3 4 212 1 206 2.22e-40 148
Msa0724460 AT5G41550.1 41.463 205 114 4 7 210 5 204 2.44e-40 148
Msa0724460 AT4G16920.3 43.478 184 97 2 4 187 1 177 2.67e-40 148
Msa0724460 AT4G16920.5 43.478 184 97 2 4 187 1 177 2.67e-40 148
Msa0724460 AT4G16920.2 43.478 184 97 2 4 187 1 177 2.75e-40 148
Msa0724460 AT4G16920.8 43.478 184 97 2 4 187 1 177 2.75e-40 148
Msa0724460 AT1G66090.1 40.642 187 109 1 19 205 28 212 4.12e-40 143
Msa0724460 AT1G72920.1 46.552 174 89 4 10 181 2 173 4.17e-40 139
Msa0724460 AT1G72900.1 42.718 206 104 7 9 204 2 203 4.28e-40 142
Msa0724460 AT4G16950.2 43.889 180 97 2 4 181 1 178 5.05e-40 147
Msa0724460 AT4G16950.6 43.889 180 97 2 4 181 1 178 5.33e-40 147
Msa0724460 AT5G44510.3 43.429 175 97 1 17 191 40 212 5.61e-40 147
Msa0724460 AT4G16950.1 43.889 180 97 2 4 181 1 178 5.70e-40 147
Msa0724460 AT4G16950.3 43.889 180 97 2 4 181 1 178 5.75e-40 147
Msa0724460 AT4G16950.5 43.889 180 97 2 4 181 1 178 5.80e-40 147
Msa0724460 AT5G44510.2 43.429 175 97 1 17 191 40 212 6.30e-40 147
Msa0724460 AT5G44510.4 43.429 175 97 1 17 191 40 212 6.39e-40 147
Msa0724460 AT5G22690.3 44.578 166 90 1 17 182 10 173 6.40e-40 146
Msa0724460 AT5G44510.1 43.429 175 97 1 17 191 40 212 6.44e-40 147
Msa0724460 AT5G22690.4 44.578 166 90 1 17 182 10 173 6.96e-40 146
Msa0724460 AT4G16950.4 43.889 180 97 2 4 181 1 178 6.99e-40 147
Msa0724460 AT4G16960.1 44.910 167 88 2 17 181 13 177 7.61e-40 146
Msa0724460 AT5G22690.1 44.578 166 90 1 17 182 10 173 8.00e-40 146
Msa0724460 AT5G41540.1 42.211 199 111 3 8 205 2 197 8.78e-40 146
Msa0724460 AT5G22690.2 44.578 166 90 1 17 182 10 173 9.07e-40 146
Msa0724460 AT1G72910.1 48.485 165 80 4 17 180 9 169 1.16e-39 141
Msa0724460 AT1G72930.2 49.315 146 70 3 17 161 9 151 2.30e-39 134
Msa0724460 AT4G11170.1 39.269 219 108 5 4 212 1 204 2.87e-39 145
Msa0724460 AT1G72950.1 41.395 215 110 8 8 212 4 212 3.20e-39 140
Msa0724460 AT1G63740.2 41.753 194 101 3 17 205 42 228 6.98e-39 144
Msa0724460 AT1G63750.3 39.806 206 121 2 1 205 1 204 8.24e-39 143
Msa0724460 AT1G72940.1 47.093 172 86 5 13 181 4 173 8.45e-39 139
Msa0724460 AT5G11250.2 43.210 162 90 1 16 177 61 220 1.03e-38 143
Msa0724460 AT5G46490.1 38.916 203 115 4 4 205 1 195 2.27e-38 137
Msa0724460 AT4G12010.1 39.698 199 117 3 9 205 3 200 3.81e-38 141
Msa0724460 AT3G44480.2 42.169 166 94 1 17 182 98 261 4.26e-38 141
Msa0724460 AT4G16990.9 48.101 158 80 1 24 181 16 171 4.36e-38 141
Msa0724460 AT3G44480.4 42.169 166 94 1 17 182 98 261 5.11e-38 141
Msa0724460 AT3G44480.1 42.169 166 94 1 17 182 98 261 5.11e-38 141
Msa0724460 AT3G44480.3 42.169 166 94 1 17 182 98 261 5.78e-38 141
Msa0724460 AT3G44480.5 42.169 166 94 1 17 182 98 261 5.78e-38 141
Msa0724460 AT3G44630.2 42.169 166 94 1 17 182 94 257 8.29e-38 140
Msa0724460 AT3G44630.1 42.169 166 94 1 17 182 94 257 8.29e-38 140
Msa0724460 AT3G44630.4 42.169 166 94 1 17 182 94 257 8.29e-38 140
Msa0724460 AT3G44630.3 42.169 166 94 1 17 182 94 257 9.16e-38 140
Msa0724460 AT5G40910.1 41.584 202 114 2 4 205 1 198 1.23e-37 140
Msa0724460 AT5G40910.9 41.584 202 114 2 4 205 1 198 1.23e-37 140
Msa0724460 AT3G44400.2 39.247 186 109 3 17 202 48 229 1.60e-37 140
Msa0724460 AT3G44400.1 39.247 186 109 3 17 202 48 229 1.60e-37 140
Msa0724460 AT3G44400.4 39.247 186 109 3 17 202 48 229 1.60e-37 140
Msa0724460 AT3G44400.5 39.247 186 109 3 17 202 48 229 1.60e-37 140
Msa0724460 AT3G44400.3 39.247 186 109 3 17 202 48 229 1.60e-37 140
Msa0724460 AT1G27170.1 40.237 169 99 2 17 184 14 181 1.90e-37 139
Msa0724460 AT5G46510.1 43.030 165 91 2 17 181 9 170 2.25e-37 139
Msa0724460 AT5G46510.2 43.030 165 91 2 17 181 9 170 2.30e-37 139
Msa0724460 AT5G46470.1 36.649 191 117 2 16 205 13 200 2.35e-37 139
Msa0724460 AT4G19500.1 44.242 165 90 1 17 181 11 173 2.96e-37 139
Msa0724460 AT5G46270.3 37.864 206 113 4 4 205 1 195 3.17e-37 139
Msa0724460 AT5G46270.2 37.864 206 113 4 4 205 1 195 3.36e-37 139
Msa0724460 AT5G46260.1 38.614 202 117 3 4 205 1 195 4.00e-37 139
Msa0724460 AT4G08450.2 41.899 179 93 4 4 181 1 169 5.40e-37 138
Msa0724460 AT4G08450.1 41.899 179 93 4 4 181 1 169 6.69e-37 138
Msa0724460 AT5G46490.8 38.119 202 118 3 4 205 1 195 7.05e-37 137
Msa0724460 AT5G17970.1 41.624 197 98 3 17 205 16 203 7.29e-37 137
Msa0724460 AT1G63870.1 38.049 205 125 2 1 205 1 203 9.96e-37 137
Msa0724460 AT2G14080.1 41.279 172 89 3 17 183 56 220 1.11e-36 137
Msa0724460 AT5G17680.1 40.741 189 102 4 18 205 19 198 1.11e-36 137
Msa0724460 AT5G46490.2 38.119 202 118 3 4 205 1 195 1.45e-36 137
Msa0724460 AT5G51630.3 44.382 178 94 2 4 181 1 173 1.79e-36 137
Msa0724460 AT5G46270.1 37.306 193 108 3 17 205 23 206 1.86e-36 137
Msa0724460 AT5G46270.5 37.306 193 108 3 17 205 23 206 1.86e-36 137
Msa0724460 AT5G46270.4 37.306 193 108 3 17 205 23 206 1.88e-36 137
Msa0724460 AT5G51630.1 44.382 178 94 2 4 181 1 173 1.90e-36 137
Msa0724460 AT3G44670.1 42.169 166 94 1 17 182 94 257 3.19e-36 136
Msa0724460 AT3G44670.2 42.169 166 94 1 17 182 94 257 3.19e-36 136
Msa0724460 AT5G17680.2 39.683 189 105 3 18 205 19 199 3.73e-36 136
Msa0724460 AT5G38850.1 43.646 181 82 3 17 190 9 176 4.01e-36 135
Msa0724460 AT3G04210.2 38.235 170 103 1 13 182 62 229 4.43e-36 134
Msa0724460 AT3G04210.1 38.235 170 103 1 13 182 62 229 4.43e-36 134
Msa0724460 AT5G46490.7 37.566 189 113 2 17 205 52 235 4.81e-36 134
Msa0724460 AT5G46490.5 37.566 189 113 2 17 205 52 235 4.81e-36 134
Msa0724460 AT5G46490.3 37.566 189 113 2 17 205 69 252 5.98e-36 134
Msa0724460 AT5G18360.1 38.197 233 111 8 17 227 16 237 6.57e-36 135
Msa0724460 AT5G46450.1 38.636 176 106 1 16 191 12 185 6.66e-36 135
Msa0724460 AT5G46450.3 38.636 176 106 1 16 191 12 185 7.08e-36 135
Msa0724460 AT5G46450.2 38.636 176 106 1 16 191 12 185 7.81e-36 135
Msa0724460 AT5G46490.6 37.566 189 113 2 17 205 52 235 7.81e-36 134
Msa0724460 AT5G46490.4 37.566 189 113 2 17 205 69 252 7.95e-36 134
Msa0724460 AT5G49140.1 41.237 194 105 4 17 206 15 203 7.99e-36 135
Msa0724460 AT4G16900.3 41.573 178 100 2 4 181 1 174 1.41e-35 134
Msa0724460 AT1G17600.1 46.199 171 86 3 9 177 3 169 1.87e-35 134
Msa0724460 AT4G16900.1 41.573 178 100 2 4 181 1 174 2.22e-35 134
Msa0724460 AT1G31540.3 41.530 183 91 4 4 181 1 172 2.31e-35 133
Msa0724460 AT1G31540.1 41.530 183 91 4 4 181 1 172 2.31e-35 133
Msa0724460 AT4G16900.2 41.573 178 100 2 4 181 1 174 3.03e-35 133
Msa0724460 AT4G16890.3 41.758 182 89 4 4 180 3 172 3.83e-35 133
Msa0724460 AT1G31540.2 41.530 183 91 4 4 181 1 172 3.84e-35 133
Msa0724460 AT4G16890.5 41.758 182 89 4 4 180 3 172 3.97e-35 133
Msa0724460 AT4G16890.2 41.758 182 89 4 4 180 12 181 4.31e-35 133
Msa0724460 AT4G16890.1 41.758 182 89 4 4 180 12 181 4.59e-35 132
Msa0724460 AT4G14370.1 41.718 163 83 3 48 205 2 157 5.87e-35 132
Msa0724460 AT5G46520.1 41.011 178 98 3 4 181 1 171 6.34e-35 132
Msa0724460 AT5G46520.2 40.361 166 94 2 16 181 49 209 5.17e-34 130
Msa0724460 AT5G41740.1 40.526 190 96 4 17 205 16 189 5.81e-34 129
Msa0724460 AT5G41740.2 40.526 190 96 4 17 205 16 189 6.23e-34 129
Msa0724460 AT1G17615.1 41.304 184 102 5 3 184 2 181 3.73e-33 124
Msa0724460 AT1G63740.1 42.945 163 81 3 48 205 2 157 5.52e-33 127
Msa0724460 AT1G72890.1 39.801 201 107 7 13 204 36 231 2.02e-32 123
Msa0724460 AT5G48770.1 39.791 191 108 4 17 205 14 199 2.13e-32 125
Msa0724460 AT5G38344.1 38.194 144 87 1 14 157 57 198 2.49e-32 117
Msa0724460 AT5G38340.3 35.385 195 113 3 17 205 57 244 3.30e-32 124
Msa0724460 AT5G38340.1 35.385 195 113 3 17 205 57 244 3.30e-32 124
Msa0724460 AT1G27170.2 36.905 168 102 3 18 184 17 181 8.43e-32 123
Msa0724460 AT4G36150.1 38.674 181 106 3 13 193 17 192 1.04e-31 123
Msa0724460 AT4G04110.1 40.230 174 99 4 19 191 45 214 1.29e-31 116
Msa0724460 AT5G45070.1 37.013 154 96 1 4 157 1 153 1.82e-31 119
Msa0724460 AT5G40100.1 43.210 162 88 2 17 177 12 170 2.34e-31 122
Msa0724460 AT5G48780.2 42.771 166 80 4 19 177 14 171 2.39e-31 121
Msa0724460 AT1G57850.1 35.976 164 100 4 15 177 10 169 2.66e-31 114
Msa0724460 AT5G48780.1 42.771 166 80 4 19 177 14 171 2.89e-31 121
Msa0724460 AT4G09430.1 36.232 207 122 5 4 208 1 199 4.74e-31 120
Msa0724460 AT1G72840.2 36.548 197 120 3 17 212 15 207 5.08e-31 121
Msa0724460 AT1G72840.3 36.548 197 120 3 17 212 15 207 5.08e-31 121
Msa0724460 AT1G27180.5 38.411 151 89 3 17 165 12 160 5.41e-31 121
Msa0724460 AT1G27180.8 38.411 151 89 3 17 165 12 160 5.41e-31 121
Msa0724460 AT1G27180.1 38.411 151 89 3 17 165 176 324 6.72e-31 120
Msa0724460 AT1G27180.1 37.838 148 79 5 18 160 18 157 4.13e-22 95.5
Msa0724460 AT1G72840.1 36.548 197 120 3 17 212 15 207 7.06e-31 120
Msa0724460 AT4G19530.2 33.047 233 137 9 13 238 12 232 7.82e-31 120
Msa0724460 AT4G19530.1 33.047 233 137 9 13 238 12 232 8.25e-31 120
Msa0724460 AT4G19520.1 39.779 181 94 7 4 181 1391 1559 1.03e-30 120
Msa0724460 AT4G19520.1 36.500 200 111 5 18 212 6 194 4.07e-25 104
Msa0724460 AT4G19510.8 36.612 183 115 1 18 200 58 239 1.04e-30 120
Msa0724460 AT4G19510.1 36.612 183 115 1 18 200 58 239 1.04e-30 120
Msa0724460 AT4G19510.3 36.612 183 115 1 18 200 58 239 1.12e-30 120
Msa0724460 AT4G19510.2 36.612 183 115 1 18 200 18 199 1.12e-30 120
Msa0724460 AT4G19510.5 36.612 183 115 1 18 200 58 239 1.12e-30 120
Msa0724460 AT4G19510.4 36.612 183 115 1 18 200 58 239 1.12e-30 120
Msa0724460 AT4G19510.7 36.612 183 115 1 18 200 58 239 1.12e-30 120
Msa0724460 AT4G19520.2 39.779 181 94 7 4 181 1391 1559 1.13e-30 120
Msa0724460 AT4G19520.2 36.500 200 111 5 18 212 6 194 5.50e-25 103
Msa0724460 AT4G19520.4 39.779 181 94 7 4 181 1391 1559 1.13e-30 120
Msa0724460 AT4G19520.4 36.500 200 111 5 18 212 6 194 5.50e-25 103
Msa0724460 AT4G19510.9 36.612 183 115 1 18 200 58 239 1.23e-30 120
Msa0724460 AT4G19510.10 36.612 183 115 1 18 200 18 199 1.23e-30 120
Msa0724460 AT4G19510.6 36.612 183 115 1 18 200 58 239 1.36e-30 120
Msa0724460 AT4G16940.6 44.444 135 71 2 49 181 1 133 2.66e-30 119
Msa0724460 AT4G16940.2 44.444 135 71 2 49 181 1 133 2.66e-30 119
Msa0724460 AT4G16940.3 44.444 135 71 2 49 181 1 133 2.66e-30 119
Msa0724460 AT4G16940.5 44.444 135 71 2 49 181 1 133 2.66e-30 119
Msa0724460 AT4G16940.1 44.444 135 71 2 49 181 1 133 3.18e-30 119
Msa0724460 AT4G16940.4 44.444 135 71 2 49 181 1 133 3.18e-30 119
Msa0724460 AT1G72890.2 44.737 152 79 4 13 163 36 183 4.34e-30 117
Msa0724460 AT4G19920.1 34.524 168 108 2 18 184 51 217 1.78e-29 112
Msa0724460 AT5G11250.3 41.912 136 77 1 42 177 5 138 2.20e-29 116
Msa0724460 AT5G11250.1 41.912 136 77 1 42 177 5 138 2.20e-29 116
Msa0724460 AT5G45060.2 38.824 170 100 2 4 173 1 166 2.85e-29 116
Msa0724460 AT5G45060.1 38.824 170 100 2 4 173 1 166 2.85e-29 116
Msa0724460 AT1G57850.3 38.194 144 84 4 15 157 10 149 4.35e-29 107
Msa0724460 AT5G45000.1 35.000 180 115 2 9 188 8 185 2.32e-28 111
Msa0724460 AT5G45000.1 28.090 178 124 2 2 177 202 377 5.08e-14 71.2
Msa0724460 AT1G57670.1 32.948 173 113 2 12 184 4 173 3.94e-28 110
Msa0724460 AT1G57630.1 42.568 148 78 4 17 161 22 165 4.37e-28 105
Msa0724460 AT1G47370.1 31.500 200 124 5 11 210 10 196 8.84e-28 109
Msa0724460 AT5G45200.3 38.172 186 106 3 4 184 1 182 1.21e-27 111
Msa0724460 AT5G44870.1 35.393 178 111 2 7 184 2 175 1.63e-27 111
Msa0724460 AT5G45200.1 38.172 186 106 3 4 184 1 182 2.27e-27 110
Msa0724460 AT3G51570.2 34.225 187 109 5 7 186 5 184 2.64e-27 110
Msa0724460 AT3G51570.1 34.225 187 109 5 7 186 5 184 3.12e-27 110
Msa0724460 AT2G32140.1 33.728 169 109 2 18 184 22 189 4.29e-27 107
Msa0724460 AT4G19520.3 40.741 162 82 6 4 163 1391 1540 5.16e-27 109
Msa0724460 AT4G19520.3 36.500 200 111 5 18 212 6 194 4.63e-25 103
Msa0724460 AT4G19520.5 40.741 162 82 6 4 163 1391 1540 5.31e-27 109
Msa0724460 AT4G19520.5 36.500 200 111 5 18 212 6 194 4.59e-25 103
Msa0724460 AT5G45210.1 39.521 167 91 5 18 182 8 166 1.31e-26 108
Msa0724460 AT5G45210.4 39.521 167 91 5 18 182 36 194 1.46e-26 108
Msa0724460 AT5G45210.5 39.521 167 91 5 18 182 27 185 1.62e-26 108
Msa0724460 AT5G45210.3 39.521 167 91 5 18 182 36 194 1.62e-26 107
Msa0724460 AT5G45250.1 36.170 188 103 5 4 184 1 178 1.86e-26 108
Msa0724460 AT5G45210.2 39.521 167 91 5 18 182 36 194 1.99e-26 107
Msa0724460 AT5G45220.2 33.136 169 110 2 18 184 332 499 1.30e-25 105
Msa0724460 AT5G45220.2 28.729 181 120 4 1 181 1 172 8.93e-20 88.2
Msa0724460 AT5G44900.1 31.977 172 114 2 13 184 16 184 1.62e-25 100
Msa0724460 AT1G51270.5 32.240 183 115 3 1 177 168 347 1.84e-25 103
Msa0724460 AT1G51270.13 32.240 183 115 3 1 177 167 346 2.00e-25 102
Msa0724460 AT1G51270.12 32.240 183 115 3 1 177 167 346 2.00e-25 102
Msa0724460 AT1G51270.14 32.240 183 115 3 1 177 167 346 2.00e-25 102
Msa0724460 AT1G51270.11 32.240 183 115 3 1 177 167 346 2.00e-25 102
Msa0724460 AT1G51270.4 32.240 183 115 3 1 177 98 277 3.30e-25 102
Msa0724460 AT2G03300.1 33.125 160 104 2 18 177 8 164 4.53e-25 98.6
Msa0724460 AT1G51270.15 32.240 183 115 3 1 177 167 346 6.12e-25 102
Msa0724460 AT1G51270.8 32.240 183 115 3 1 177 338 517 1.31e-24 102
Msa0724460 AT1G51270.2 32.240 183 115 3 1 177 338 517 1.31e-24 102
Msa0724460 AT1G51270.3 32.240 183 115 3 1 177 338 517 1.41e-24 102
Msa0724460 AT1G51270.9 32.240 183 115 3 1 177 290 469 1.62e-24 102
Msa0724460 AT1G51270.6 32.240 183 115 3 1 177 290 469 1.62e-24 102
Msa0724460 AT1G51270.7 32.240 183 115 3 1 177 290 469 1.62e-24 102
Msa0724460 AT1G51270.10 32.240 183 115 3 1 177 290 469 1.62e-24 102
Msa0724460 AT1G60320.1 33.758 157 101 2 1 157 8 161 2.91e-24 95.5
Msa0724460 AT1G72870.1 38.547 179 101 6 17 190 10 184 3.05e-24 101
Msa0724460 AT5G17880.1 35.870 184 108 4 4 182 1 179 4.27e-24 101
Msa0724460 AT5G17880.2 35.870 184 108 4 4 182 1 179 4.83e-24 101
Msa0724460 AT2G03030.1 33.750 160 103 2 18 177 8 164 5.73e-24 95.9
Msa0724460 AT5G45080.1 37.419 155 95 2 4 157 1 154 7.23e-24 99.0
Msa0724460 AT4G23515.2 31.492 181 111 4 15 184 7 185 1.25e-23 96.7
Msa0724460 AT4G23515.1 32.022 178 108 4 15 181 7 182 1.64e-23 97.1
Msa0724460 AT5G45220.1 32.544 169 104 2 18 186 332 490 1.94e-23 99.0
Msa0724460 AT5G45220.1 28.729 181 120 4 1 181 1 172 9.50e-20 88.2
Msa0724460 AT4G36140.1 33.333 204 123 3 17 220 50 240 4.73e-23 98.2
Msa0724460 AT4G36140.1 36.306 157 76 3 26 181 443 576 2.54e-19 87.4
Msa0724460 AT1G65390.2 36.879 141 82 3 18 155 23 159 7.47e-23 94.0
Msa0724460 AT1G65390.3 35.507 138 88 1 18 155 23 159 9.92e-23 94.4
Msa0724460 AT1G27180.3 36.601 153 84 5 18 165 18 162 3.32e-22 95.9
Msa0724460 AT1G27180.2 36.601 153 84 5 18 165 18 162 3.40e-22 95.9
Msa0724460 AT2G17060.2 29.187 209 138 3 18 226 19 217 4.93e-22 95.1
Msa0724460 AT1G65390.1 35.507 138 88 1 18 155 23 159 5.01e-22 94.4
Msa0724460 AT1G57830.1 35.172 145 91 2 19 163 23 164 5.06e-22 89.7
Msa0724460 AT2G17060.1 29.187 209 138 3 18 226 19 217 6.51e-22 94.7
Msa0724460 AT1G09665.1 32.468 154 97 3 4 157 1 147 8.39e-22 89.0
Msa0724460 AT1G51270.1 32.911 158 97 3 1 152 338 492 1.62e-21 93.6
Msa0724460 AT4G11340.1 30.435 230 130 6 13 217 222 446 2.05e-21 92.8
Msa0724460 AT3G51560.1 35.233 193 100 7 15 205 3 172 3.00e-21 92.8
Msa0724460 AT5G45230.1 32.000 175 110 3 18 184 12 185 4.64e-21 92.4
Msa0724460 AT5G51630.5 42.727 110 61 1 72 181 2 109 6.60e-21 92.0
Msa0724460 AT5G51630.2 42.727 110 61 1 72 181 2 109 7.33e-21 91.7
Msa0724460 AT5G51630.4 42.727 110 61 1 72 181 2 109 7.67e-21 91.7
Msa0724460 AT5G51630.6 42.727 110 61 1 72 181 2 109 7.67e-21 91.7
Msa0724460 AT4G23510.2 33.929 168 93 5 4 158 1 163 2.47e-20 90.1
Msa0724460 AT4G23510.3 33.929 168 93 5 4 158 1 163 2.73e-20 90.1
Msa0724460 AT4G23510.1 33.929 168 93 5 4 158 1 163 2.88e-20 89.7
Msa0724460 AT1G72850.1 34.568 162 91 3 18 178 8 155 1.70e-19 87.0
Msa0724460 AT4G36140.2 36.306 157 76 3 26 181 258 391 2.52e-19 87.4
Msa0724460 AT5G44920.1 29.609 179 112 4 16 182 10 186 3.61e-18 81.3
Msa0724460 AT2G17050.1 33.333 183 107 6 7 182 1115 1289 3.77e-17 80.9
Msa0724460 AT2G17050.2 33.333 183 107 6 7 182 1146 1320 3.89e-17 80.9
Msa0724460 AT5G44910.1 30.556 144 99 1 14 157 8 150 4.89e-17 78.2
Msa0724460 AT1G57850.2 35.780 109 65 4 50 157 32 136 8.41e-17 75.1
Msa0724460 AT5G45240.2 44.144 111 55 4 74 182 46 151 8.28e-16 77.0
Msa0724460 AT5G45240.1 44.144 111 55 4 74 182 46 151 8.93e-16 77.0
Msa0724460 AT2G17050.3 35.443 158 87 6 7 157 1146 1295 1.58e-15 76.3
Msa0724460 AT5G44920.2 30.709 127 78 2 16 133 10 135 1.17e-14 71.6
Msa0724460 AT4G19925.1 27.568 185 126 4 18 194 13 197 1.40e-14 71.6
Msa0724460 AT1G52900.1 28.402 169 101 5 13 178 34 185 6.08e-14 68.9
Msa0724460 AT5G45050.2 30.055 183 94 4 26 207 14 163 1.69e-13 70.1
Msa0724460 AT5G45050.3 29.730 185 92 6 26 207 14 163 1.79e-13 70.1
Msa0724460 AT5G45050.1 30.055 183 94 4 26 207 14 163 1.86e-13 70.1
Msa0724460 AT4G09420.1 31.373 153 99 4 18 169 13 160 5.63e-12 65.5
Msa0724460 AT1G65850.3 36.170 94 48 3 95 183 1 87 1.01e-11 64.7
Msa0724460 AT2G14080.2 35.106 94 49 3 95 183 1 87 1.18e-11 64.7
Msa0724460 AT4G19910.1 27.711 166 115 4 19 181 9 172 4.17e-11 61.6

Find 50 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATACCTCGTGAGTATTT+TGG 0.135345 5_1:+22967906 None:intergenic
TGAAAATACTTGACTGTAAA+AGG 0.188063 5_1:-22967670 Msa0724460:CDS
AAATATCAAACGCACTTCTT+AGG 0.197866 5_1:-22967772 Msa0724460:CDS
ACTTGACTGTAAAAGGAATA+TGG 0.219120 5_1:-22967663 Msa0724460:CDS
ACGAGGTATTCCTTAGCTTT+AGG 0.221770 5_1:-22967895 Msa0724460:CDS
CTAAACATGAGCAACAATTT+AGG 0.237466 5_1:-22967559 Msa0724460:CDS
CGAGGTATTCCTTAGCTTTA+GGG 0.245221 5_1:-22967894 Msa0724460:CDS
TCCAATTAAGATGCCTTATA+TGG 0.259152 5_1:-22967954 None:intergenic
GCTGGGATTGCTCTCTTAAT+AGG 0.320552 5_1:-22967475 Msa0724460:intron
GATGATGATTGTGCCATATA+AGG 0.352021 5_1:+22967941 None:intergenic
GTGGATTCAATACTCAACTA+TGG 0.371477 5_1:-22965389 Msa0724460:CDS
ATTTAGGAACAATATGAATA+AGG 0.375741 5_1:-22967543 Msa0724460:CDS
CGCACTTCTTAGGGCAATTG+AGG 0.381369 5_1:-22967762 Msa0724460:CDS
TGCTAATTCAAAGTGGTGTT+TGG 0.389882 5_1:-22967702 Msa0724460:CDS
CAAGAAACCAACCAGCATCT+TGG 0.405951 5_1:-22965357 Msa0724460:CDS
GCATGAGATTCATTGCTTGT+AGG 0.415763 5_1:+22965418 None:intergenic
CGTAATCAAACAGGAGGTTA+TGG 0.417756 5_1:-22967593 Msa0724460:CDS
GCTGAAGTTGCTAATTTAGC+TGG 0.423690 5_1:-22967497 Msa0724460:CDS
AAGAAACCAACCAGCATCTT+GGG 0.425021 5_1:-22965356 Msa0724460:CDS
CTTGACTGTAAAAGGAATAT+GGG 0.439946 5_1:-22967662 Msa0724460:CDS
GTTTGATTACGAACACTAGA+AGG 0.449347 5_1:+22967605 None:intergenic
AATATCAAACGCACTTCTTA+GGG 0.450712 5_1:-22967771 Msa0724460:CDS
TTCTAAGCTGCCCAAGATGC+TGG 0.450947 5_1:+22965346 None:intergenic
TCTAGTGTTCGTAATCAAAC+AGG 0.452377 5_1:-22967602 Msa0724460:CDS
AAGTTGCTAATTTAGCTGGC+TGG 0.459052 5_1:-22967493 Msa0724460:CDS
CACAAGATTGTAGTCTATGT+AGG 0.466220 5_1:+22967805 None:intergenic
GCTAAGGTGGAGGAGTGCTT+TGG 0.470145 5_1:-22967519 Msa0724460:CDS
ATGAATCTCATGCGTGGAAG+TGG 0.471230 5_1:-22965408 Msa0724460:CDS
TTGTTAAGCAAGCATGAAGA+TGG 0.478382 5_1:+22967843 None:intergenic
ATTCCTTAGCTTTAGGGGAG+AGG 0.500093 5_1:-22967888 Msa0724460:CDS
AGTTGCTAATTTAGCTGGCT+GGG 0.509697 5_1:-22967492 Msa0724460:CDS
AAGCTGCCCAAGATGCTGGT+TGG 0.527754 5_1:+22965350 None:intergenic
ATCTTCATGCTTGCTTAACA+AGG 0.531575 5_1:-22967841 Msa0724460:CDS
ACAATATGAATAAGGTGCTA+AGG 0.531835 5_1:-22967535 Msa0724460:CDS
TAGACTACAATCTTGTGAGA+GGG 0.571049 5_1:-22967799 Msa0724460:CDS
AAATTGAATCATGTGTATGT+TGG 0.579734 5_1:-22965483 Msa0724460:CDS
TGAATAAGGTGCTAAGGTGG+AGG 0.580422 5_1:-22967529 Msa0724460:CDS
TGTCCTCTCCCCTAAAGCTA+AGG 0.582375 5_1:+22967885 None:intergenic
ATATGAATAAGGTGCTAAGG+TGG 0.589469 5_1:-22967532 Msa0724460:CDS
AAAACTATGCTAATTCAAAG+TGG 0.594469 5_1:-22967709 Msa0724460:CDS
TGAGGAGTCAAAGCTTTCTG+TGG 0.604224 5_1:-22967744 Msa0724460:CDS
GAGGTATTCCTTAGCTTTAG+GGG 0.604371 5_1:-22967893 Msa0724460:CDS
CAGCATGGAATCCGAACTCG+TGG 0.605322 5_1:-22965532 Msa0724460:CDS
ATAGACTACAATCTTGTGAG+AGG 0.624260 5_1:-22967800 Msa0724460:CDS
AGTGTTCGTAATCAAACAGG+AGG 0.632063 5_1:-22967599 Msa0724460:CDS
CAAGCAATGAATCTCATGCG+TGG 0.648748 5_1:-22965414 Msa0724460:CDS
AGACTACAATCTTGTGAGAG+GGG 0.649761 5_1:-22967798 Msa0724460:CDS
AATGAAAACTACACAGCACG+TGG 0.685108 5_1:+22965294 None:intergenic
CATTCCCCAAAATACTCACG+AGG 0.700111 5_1:-22967912 Msa0724460:CDS
GTATGTTGGTGACATAGATG+AGG 0.721773 5_1:-22965469 Msa0724460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAATTTAAAAATTAT+AGG + chr5_1:22966787-22966806 None:intergenic 0.0%
!!! ATTAATTTTAATAGAAAGTT+TGG - chr5_1:22966573-22966592 Msa0724460:intron 10.0%
!! AATAATATTATTATAGAGAA+AGG - chr5_1:22966633-22966652 Msa0724460:intron 10.0%
!! ATAATAAAAATATGTATACA+AGG + chr5_1:22967534-22967553 None:intergenic 10.0%
!! ACATCATGTTAAAATTAAAT+TGG + chr5_1:22965881-22965900 None:intergenic 15.0%
!!! AATTGTTTTGTTTTCTATTT+TGG + chr5_1:22966394-22966413 None:intergenic 15.0%
!!! GGTTTTTATTTTAATAATCA+CGG - chr5_1:22966654-22966673 Msa0724460:intron 15.0%
!! TAAAAATAAAGAACATTTCA+AGG + chr5_1:22966729-22966748 None:intergenic 15.0%
!! AAGAAAATATGGAAAAAATT+GGG + chr5_1:22967018-22967037 None:intergenic 15.0%
!! AAAGAAAATATGGAAAAAAT+TGG + chr5_1:22967019-22967038 None:intergenic 15.0%
!!! TTTTACACAAATAAAATGTT+TGG + chr5_1:22967694-22967713 None:intergenic 15.0%
!! ATTTAGGAACAATATGAATA+AGG - chr5_1:22965703-22965722 Msa0724460:intron 20.0%
!! TTCGTTGTAATCAAAATTTA+AGG + chr5_1:22966543-22966562 None:intergenic 20.0%
!! AATAGAAATAGAAATAGCAA+GGG + chr5_1:22966837-22966856 None:intergenic 20.0%
!! AAATAGAAATAGAAATAGCA+AGG + chr5_1:22966838-22966857 None:intergenic 20.0%
!!! ACACTATAAGTTTTATGATA+AGG + chr5_1:22966945-22966964 None:intergenic 20.0%
!! AGAAAATATGGAAAAAATTG+GGG + chr5_1:22967017-22967036 None:intergenic 20.0%
!! AGTAGTATAGAAAGAAAATA+TGG + chr5_1:22967029-22967048 None:intergenic 20.0%
!! ATAAATATATAGAAGCTTGA+TGG + chr5_1:22967430-22967449 None:intergenic 20.0%
! AAAACTATGCTAATTCAAAG+TGG - chr5_1:22965537-22965556 Msa0724460:intron 25.0%
! TGAAAATACTTGACTGTAAA+AGG - chr5_1:22965576-22965595 Msa0724460:intron 25.0%
!! TATCAAAGCAAAAGTTTTCA+TGG + chr5_1:22965811-22965830 None:intergenic 25.0%
!!! TAGTAGTTATGTTAGTTTTG+AGG - chr5_1:22966178-22966197 Msa0724460:intron 25.0%
! GTTCATACTACTAAAACTAT+TGG + chr5_1:22966249-22966268 None:intergenic 25.0%
! TTGTGAAAAGATGAATAGTT+TGG - chr5_1:22966318-22966337 Msa0724460:intron 25.0%
! AAAGATGAATAGTTTGGATT+TGG - chr5_1:22966324-22966343 Msa0724460:intron 25.0%
! CTTTCTCTATAATATTCAAG+TGG + chr5_1:22966609-22966628 None:intergenic 25.0%
! CACTTGAATATTATAGAGAA+AGG - chr5_1:22966607-22966626 Msa0724460:intron 25.0%
! AAAATATGGAAAAAATTGGG+GGG + chr5_1:22967015-22967034 None:intergenic 25.0%
! GAAAATATGGAAAAAATTGG+GGG + chr5_1:22967016-22967035 None:intergenic 25.0%
! ATAGGATAACAAAAGAAAGA+AGG + chr5_1:22967215-22967234 None:intergenic 25.0%
! ATGTGATCATTGAAATTCAT+CGG + chr5_1:22967605-22967624 None:intergenic 25.0%
!! TTTCAATGATCACATTTTAG+TGG - chr5_1:22967610-22967629 Msa0724460:CDS 25.0%
! TTTATTTGTGTAAAACAGCA+TGG - chr5_1:22967699-22967718 Msa0724460:CDS 25.0%
! AAATTGAATCATGTGTATGT+TGG - chr5_1:22967763-22967782 Msa0724460:CDS 25.0%
AAATATCAAACGCACTTCTT+AGG - chr5_1:22965474-22965493 Msa0724460:CDS 30.0%
AATATCAAACGCACTTCTTA+GGG - chr5_1:22965475-22965494 Msa0724460:CDS 30.0%
ACTTGACTGTAAAAGGAATA+TGG - chr5_1:22965583-22965602 Msa0724460:intron 30.0%
CTTGACTGTAAAAGGAATAT+GGG - chr5_1:22965584-22965603 Msa0724460:intron 30.0%
GGATCTATACCATAAAAAAC+AGG + chr5_1:22965623-22965642 None:intergenic 30.0%
CTAAACATGAGCAACAATTT+AGG - chr5_1:22965687-22965706 Msa0724460:intron 30.0%
! ACAATATGAATAAGGTGCTA+AGG - chr5_1:22965711-22965730 Msa0724460:intron 30.0%
TCTATAATATTCAAGTGGTG+GGG + chr5_1:22966604-22966623 None:intergenic 30.0%
CTCTATAATATTCAAGTGGT+GGG + chr5_1:22966605-22966624 None:intergenic 30.0%
TCTCTATAATATTCAAGTGG+TGG + chr5_1:22966606-22966625 None:intergenic 30.0%
! GGAATTGAATTTGAAATCTG+CGG + chr5_1:22967168-22967187 None:intergenic 30.0%
AACTCATTGAAGAAGATGAA+AGG - chr5_1:22967321-22967340 Msa0724460:intron 30.0%
ACTCATTGAAGAAGATGAAA+GGG - chr5_1:22967322-22967341 Msa0724460:intron 30.0%
!! TCACATTTTAGTGGTATTTG+CGG - chr5_1:22967619-22967638 Msa0724460:CDS 30.0%
GATGATGATTGTGCCATATA+AGG + chr5_1:22965308-22965327 None:intergenic 35.0%
! AATACCTCGTGAGTATTTTG+GGG + chr5_1:22965341-22965360 None:intergenic 35.0%
! GAATACCTCGTGAGTATTTT+GGG + chr5_1:22965342-22965361 None:intergenic 35.0%
TTGTTAAGCAAGCATGAAGA+TGG + chr5_1:22965406-22965425 None:intergenic 35.0%
ATCTTCATGCTTGCTTAACA+AGG - chr5_1:22965405-22965424 Msa0724460:CDS 35.0%
CACAAGATTGTAGTCTATGT+AGG + chr5_1:22965444-22965463 None:intergenic 35.0%
ATAGACTACAATCTTGTGAG+AGG - chr5_1:22965446-22965465 Msa0724460:CDS 35.0%
TAGACTACAATCTTGTGAGA+GGG - chr5_1:22965447-22965466 Msa0724460:CDS 35.0%
TGCTAATTCAAAGTGGTGTT+TGG - chr5_1:22965544-22965563 Msa0724460:intron 35.0%
!!! GTTGTAGTGCCTGTTTTTTA+TGG - chr5_1:22965611-22965630 Msa0724460:intron 35.0%
GTTTGATTACGAACACTAGA+AGG + chr5_1:22965644-22965663 None:intergenic 35.0%
TCTAGTGTTCGTAATCAAAC+AGG - chr5_1:22965644-22965663 Msa0724460:intron 35.0%
! ATATGAATAAGGTGCTAAGG+TGG - chr5_1:22965714-22965733 Msa0724460:intron 35.0%
TACATGACTACTCAGAATGA+CGG - chr5_1:22965990-22966009 Msa0724460:intron 35.0%
TACATGACTACTCAGAATGA+CGG - chr5_1:22965990-22966009 Msa0724460:intron 35.0%
!! TTGGTATTGATTTGTTGCGT+AGG + chr5_1:22966230-22966249 None:intergenic 35.0%
!! GTTTTAGTAGTATGAACGAG+TGG - chr5_1:22966252-22966271 Msa0724460:intron 35.0%
! CCTTTGTTGACTATTAGCTT+GGG - chr5_1:22966455-22966474 Msa0724460:intron 35.0%
GAAGATGATCACAATCACAT+AGG + chr5_1:22967066-22967085 None:intergenic 35.0%
TCGGTTTAGAAAGTGAACTT+GGG + chr5_1:22967103-22967122 None:intergenic 35.0%
TTGGAAGTAAGAAGCAGATA+CGG - chr5_1:22967361-22967380 Msa0724460:intron 35.0%
TAGAAGATGACAATGGAGAT+GGG - chr5_1:22967387-22967406 Msa0724460:intron 35.0%
AAAATTGACATGAACAGTGG+CGG + chr5_1:22967670-22967689 None:intergenic 35.0%
GGAAAAATTGACATGAACAG+TGG + chr5_1:22967673-22967692 None:intergenic 35.0%
!!! AGCAATTTTTTCCACGAGTT+CGG + chr5_1:22967728-22967747 None:intergenic 35.0%
AACTCGTGGAAAAAATTGCT+AGG - chr5_1:22967728-22967747 Msa0724460:CDS 35.0%
ACTCGTGGAAAAAATTGCTA+GGG - chr5_1:22967729-22967748 Msa0724460:CDS 35.0%
AAAAATTGCTAGGGATGTGT+TGG - chr5_1:22967738-22967757 Msa0724460:CDS 35.0%
GTGGATTCAATACTCAACTA+TGG - chr5_1:22967857-22967876 Msa0724460:CDS 35.0%
!! AGTATTTTGGGGAATGTTGG+AGG + chr5_1:22965330-22965349 None:intergenic 40.0%
!! GTGAGTATTTTGGGGAATGT+TGG + chr5_1:22965333-22965352 None:intergenic 40.0%
! GGAATACCTCGTGAGTATTT+TGG + chr5_1:22965343-22965362 None:intergenic 40.0%
! ACGAGGTATTCCTTAGCTTT+AGG - chr5_1:22965351-22965370 Msa0724460:CDS 40.0%
!! CGAGGTATTCCTTAGCTTTA+GGG - chr5_1:22965352-22965371 Msa0724460:CDS 40.0%
!! GAGGTATTCCTTAGCTTTAG+GGG - chr5_1:22965353-22965372 Msa0724460:CDS 40.0%
AGACTACAATCTTGTGAGAG+GGG - chr5_1:22965448-22965467 Msa0724460:CDS 40.0%
AGTGTTCGTAATCAAACAGG+AGG - chr5_1:22965647-22965666 Msa0724460:intron 40.0%
CGTAATCAAACAGGAGGTTA+TGG - chr5_1:22965653-22965672 Msa0724460:intron 40.0%
GCTGAAGTTGCTAATTTAGC+TGG - chr5_1:22965749-22965768 Msa0724460:intron 40.0%
AAGTTGCTAATTTAGCTGGC+TGG - chr5_1:22965753-22965772 Msa0724460:intron 40.0%
AGTTGCTAATTTAGCTGGCT+GGG - chr5_1:22965754-22965773 Msa0724460:intron 40.0%
! GCCTTTGTTGACTATTAGCT+TGG - chr5_1:22966454-22966473 Msa0724460:intron 40.0%
CCCAAGCTAATAGTCAACAA+AGG + chr5_1:22966458-22966477 None:intergenic 40.0%
CTTATAGTGTTCATGTCCAG+TGG - chr5_1:22966955-22966974 Msa0724460:intron 40.0%
GGTTTAGAAAGTGAACTTGG+GGG + chr5_1:22967101-22967120 None:intergenic 40.0%
CGGTTTAGAAAGTGAACTTG+GGG + chr5_1:22967102-22967121 None:intergenic 40.0%
! GTCGGTTTAGAAAGTGAACT+TGG + chr5_1:22967104-22967123 None:intergenic 40.0%
TTATCCTATCAACGACAGTG+CGG - chr5_1:22967226-22967245 Msa0724460:intron 40.0%
ATTGAAGAAGATGAAAGGGC+TGG - chr5_1:22967326-22967345 Msa0724460:intron 40.0%
GGGCTGGAAAATTATTGAGT+TGG - chr5_1:22967342-22967361 Msa0724460:intron 40.0%
TGGAAGTAAGAAGCAGATAC+GGG - chr5_1:22967362-22967381 Msa0724460:intron 40.0%
GTAGAAGATGACAATGGAGA+TGG - chr5_1:22967386-22967405 Msa0724460:intron 40.0%
AGCACACAAATGTAGTGTTG+TGG - chr5_1:22967458-22967477 Msa0724460:intron 40.0%
GCACACAAATGTAGTGTTGT+GGG - chr5_1:22967459-22967478 Msa0724460:intron 40.0%
ATCTTGCCCAAAATGTTAGG+GGG + chr5_1:22967647-22967666 None:intergenic 40.0%
GATCTTGCCCAAAATGTTAG+GGG + chr5_1:22967648-22967667 None:intergenic 40.0%
GGATCTTGCCCAAAATGTTA+GGG + chr5_1:22967649-22967668 None:intergenic 40.0%
!! GTATGTTGGTGACATAGATG+AGG - chr5_1:22967777-22967796 Msa0724460:CDS 40.0%
GCATGAGATTCATTGCTTGT+AGG + chr5_1:22967831-22967850 None:intergenic 40.0%
AAGAAACCAACCAGCATCTT+GGG - chr5_1:22967890-22967909 Msa0724460:CDS 40.0%
CATTCCCCAAAATACTCACG+AGG - chr5_1:22965334-22965353 Msa0724460:CDS 45.0%
!! ATTCCTTAGCTTTAGGGGAG+AGG - chr5_1:22965358-22965377 Msa0724460:CDS 45.0%
TGAGGAGTCAAAGCTTTCTG+TGG - chr5_1:22965502-22965521 Msa0724460:CDS 45.0%
! TGAATAAGGTGCTAAGGTGG+AGG - chr5_1:22965717-22965736 Msa0724460:intron 45.0%
GCTGGGATTGCTCTCTTAAT+AGG - chr5_1:22965771-22965790 Msa0724460:intron 45.0%
GAGTGGAACCAAGTCCAATA+GGG - chr5_1:22966269-22966288 Msa0724460:intron 45.0%
GTATTCGACCCTATTGGACT+TGG + chr5_1:22966280-22966299 None:intergenic 45.0%
CGCTAAGTATTCGACCCTAT+TGG + chr5_1:22966286-22966305 None:intergenic 45.0%
ATAGTGTTCATGTCCAGTGG+CGG - chr5_1:22966958-22966977 Msa0724460:intron 45.0%
TGTGATCATCTTCTCCCTCA+CGG - chr5_1:22967073-22967092 Msa0724460:intron 45.0%
GCAGAAAGAGTTGTTGTGGT+CGG + chr5_1:22967122-22967141 None:intergenic 45.0%
! AATTTGAAATCTGCGGCGAC+CGG + chr5_1:22967161-22967180 None:intergenic 45.0%
! AAGAAGGCACGAGAGCTTTA+GGG + chr5_1:22967199-22967218 None:intergenic 45.0%
! AAAGAAGGCACGAGAGCTTT+AGG + chr5_1:22967200-22967219 None:intergenic 45.0%
TATCCTATCAACGACAGTGC+GGG - chr5_1:22967227-22967246 Msa0724460:intron 45.0%
!! CGGGATTGTGATTTGGTTTC+TGG - chr5_1:22967246-22967265 Msa0724460:intron 45.0%
GGAAGTAAGAAGCAGATACG+GGG - chr5_1:22967363-22967382 Msa0724460:intron 45.0%
GAAGTAAGAAGCAGATACGG+GGG - chr5_1:22967364-22967383 Msa0724460:intron 45.0%
CACAAATGTAGTGTTGTGGG+TGG - chr5_1:22967462-22967481 Msa0724460:intron 45.0%
CGGATCTTGCCCAAAATGTT+AGG + chr5_1:22967650-22967669 None:intergenic 45.0%
CAAGCAATGAATCTCATGCG+TGG - chr5_1:22967832-22967851 Msa0724460:CDS 45.0%
ATGAATCTCATGCGTGGAAG+TGG - chr5_1:22967838-22967857 Msa0724460:CDS 45.0%
CAAGAAACCAACCAGCATCT+TGG - chr5_1:22967889-22967908 Msa0724460:CDS 45.0%
!!! TATATAATTTTTACTTTTTT+TGG - chr5_1:22966500-22966519 Msa0724460:intron 5.0%
!!! AATTTTTAAATTTTAATATG+TGG - chr5_1:22966789-22966808 Msa0724460:intron 5.0%
TGTCCTCTCCCCTAAAGCTA+AGG + chr5_1:22965364-22965383 None:intergenic 50.0%
CGCACTTCTTAGGGCAATTG+AGG - chr5_1:22965484-22965503 Msa0724460:CDS 50.0%
CGAGTGGAACCAAGTCCAAT+AGG - chr5_1:22966268-22966287 Msa0724460:intron 50.0%
GAAATAGCAAGGGACACGTG+AGG + chr5_1:22966827-22966846 None:intergenic 50.0%
!! GAGAGCTTTAGGGGAAGGAA+AGG + chr5_1:22967189-22967208 None:intergenic 50.0%
! AGAAGGCACGAGAGCTTTAG+GGG + chr5_1:22967198-22967217 None:intergenic 50.0%
AATCCCGCACTGTCGTTGAT+AGG + chr5_1:22967233-22967252 None:intergenic 50.0%
GACAGTGCGGGATTGTGATT+TGG - chr5_1:22967239-22967258 Msa0724460:intron 50.0%
ACGGGGGTAGAAGATGACAA+TGG - chr5_1:22967380-22967399 Msa0724460:intron 50.0%
TGTAGTGTTGTGGGTGGTTG+TGG - chr5_1:22967468-22967487 Msa0724460:intron 50.0%
GTAGTGTTGTGGGTGGTTGT+GGG - chr5_1:22967469-22967488 Msa0724460:intron 50.0%
TTCTAAGCTGCCCAAGATGC+TGG + chr5_1:22967903-22967922 None:intergenic 50.0%
!! GCTAAGGTGGAGGAGTGCTT+TGG - chr5_1:22965727-22965746 Msa0724460:intron 55.0%
AGGCAGTTCAGACGAGGTTC+TGG + chr5_1:22966210-22966229 None:intergenic 55.0%
TTGCGTAGGCAGTTCAGACG+AGG + chr5_1:22966216-22966235 None:intergenic 55.0%
GAAAAAATTGGGGGGAGCCG+TGG + chr5_1:22967007-22967026 None:intergenic 55.0%
GGCGGCAGAAAGAGTTGTTG+TGG + chr5_1:22967126-22967145 None:intergenic 55.0%
! TGCGGCTCCCCCTAACATTT+TGG - chr5_1:22967637-22967656 Msa0724460:CDS 55.0%
! GCGGCTCCCCCTAACATTTT+GGG - chr5_1:22967638-22967657 Msa0724460:CDS 55.0%
CAGCATGGAATCCGAACTCG+TGG - chr5_1:22967714-22967733 Msa0724460:CDS 55.0%
AAGCTGCCCAAGATGCTGGT+TGG + chr5_1:22967899-22967918 None:intergenic 55.0%
!! TGTCCAGTGGCGGACCTTCT+CGG - chr5_1:22966968-22966987 Msa0724460:intron 60.0%
!! TGAACTTGGGGGTGCCGTGA+GGG + chr5_1:22967090-22967109 None:intergenic 60.0%
TGCCGCCGCTCTCGAATTTC+CGG - chr5_1:22967139-22967158 Msa0724460:intron 60.0%
GACCGGAAATTCGAGAGCGG+CGG + chr5_1:22967144-22967163 None:intergenic 60.0%
GGCGACCGGAAATTCGAGAG+CGG + chr5_1:22967147-22967166 None:intergenic 60.0%
!! GGCACGAGAGCTTTAGGGGA+AGG + chr5_1:22967194-22967213 None:intergenic 60.0%
!! GTCCAGTGGCGGACCTTCTC+GGG - chr5_1:22966969-22966988 Msa0724460:intron 65.0%
GGACCTTCTCGGGAGCGGAA+GGG - chr5_1:22966979-22966998 Msa0724460:intron 65.0%
!! GTGAACTTGGGGGTGCCGTG+AGG + chr5_1:22967091-22967110 None:intergenic 65.0%
CTCCCGAGAAGGTCCGCCAC+TGG + chr5_1:22966974-22966993 None:intergenic 70.0%
!! GTGGCGGACCTTCTCGGGAG+CGG - chr5_1:22966974-22966993 Msa0724460:intron 70.0%
CGGACCTTCTCGGGAGCGGA+AGG - chr5_1:22966978-22966997 Msa0724460:intron 70.0%
GCTCCCTTCCGCTCCCGAGA+AGG + chr5_1:22966985-22967004 None:intergenic 70.0%
TCGGGAGCGGAAGGGAGCCA+CGG - chr5_1:22966987-22967006 Msa0724460:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 22965302 22967966 22965302 ID=Msa0724460;Name=Msa0724460
chr5_1 mRNA 22965302 22967966 22965302 ID=Msa0724460-mRNA-1;Parent=Msa0724460;Name=Msa0724460-mRNA-1;_AED=0.78;_eAED=0.78;_QI=0|0|0|0.5|1|1|2|0|246
chr5_1 exon 22967476 22967966 22967476 ID=Msa0724460-mRNA-1:exon:8643;Parent=Msa0724460-mRNA-1
chr5_1 exon 22965302 22965551 22965302 ID=Msa0724460-mRNA-1:exon:8642;Parent=Msa0724460-mRNA-1
chr5_1 CDS 22967476 22967966 22967476 ID=Msa0724460-mRNA-1:cds;Parent=Msa0724460-mRNA-1
chr5_1 CDS 22965302 22965551 22965302 ID=Msa0724460-mRNA-1:cds;Parent=Msa0724460-mRNA-1
Gene Sequence

>Msa0724460

ATGCCTTATATGGCACAATCATCATCCTCCAACATTCCCCAAAATACTCACGAGGTATTCCTTAGCTTTAGGGGAGAGGACACACGCTATAACTTCACAAGCCATCTTCATGCTTGCTTAACAAGGTTTCAAATCAAAACCTACATAGACTACAATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATTGAGGAGTCAAAGCTTTCTGTGGTTGTTTTGTCTGAAAACTATGCTAATTCAAAGTGGTGTTTGGATGAACTTGTGAAAATACTTGACTGTAAAAGGAATATGGGACAAGTTGTAGTGCCTGTTTTTTATGGTATAGATCCTTCTAGTGTTCGTAATCAAACAGGAGGTTATGGAATTGCTTTTGCTAAACATGAGCAACAATTTAGGAACAATATGAATAAGGTGCTAAGGTGGAGGAGTGCTTTGGCTGAAGTTGCTAATTTAGCTGGCTGGGATTGCTCTCTTAATAGCATGGAATCCGAACTCGTGGAAAAAATTGCTAGGGATGTGTTGGAGAAATTGAATCATGTGTATGTTGGTGACATAGATGAGGAAATCAATAAATATGAGCAACTATCAAACCTACAAGCAATGAATCTCATGCGTGGAAGTGGATTCAATACTCAACTATGGAATGATCTTCAAGAAACCAACCAGCATCTTGGGCAGCTTAGAATGAAGAAAAACGTTATTCTACTTAGATTGCCACGTGCTGTGTAG
Protein sequence

>Msa0724460

MPYMAQSSSSNIPQNTHEVFLSFRGEDTRYNFTSHLHACLTRFQIKTYIDYNLVRGDEISNALLRAIEESKLSVVVLSENYANSKWCLDELVKILDCKRNMGQVVVPVFYGIDPSSVRNQTGGYGIAFAKHEQQFRNNMNKVLRWRSALAEVANLAGWDCSLNSMESELVEKIARDVLEKLNHVYVGDIDEEINKYEQLSNLQAMNLMRGSGFNTQLWNDLQETNQHLGQLRMKKNVILLRLPRAV*