AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0789210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789210 MtrunA17_Chr5g0415641 63.180 239 86 1 4 242 1 237 8.66e-110 316
Msa0789210 MtrunA17_Chr8g0362831 58.547 234 95 1 13 246 12 243 2.15e-94 277
Msa0789210 MtrunA17_Chr8g0363491 58.621 232 94 1 13 244 12 241 4.20e-94 276
Msa0789210 MtrunA17_Chr8g0362921 58.190 232 95 1 13 244 13 242 3.27e-93 274
Msa0789210 MtrunA17_Chr5g0415571 62.814 199 71 1 7 202 2 200 1.58e-91 268
Msa0789210 MtrunA17_Chr8g0362611 53.219 233 105 2 3 235 5 233 7.31e-86 257
Msa0789210 MtrunA17_Chr5g0415611 54.508 244 103 4 2 242 4 242 1.25e-85 256
Msa0789210 MtrunA17_Chr5g0415631 56.306 222 94 2 13 234 16 234 1.12e-83 250
Msa0789210 MtrunA17_Chr8g0362601 53.275 229 103 2 7 235 9 233 5.01e-83 251
Msa0789210 MtrunA17_Chr5g0415581 58.416 202 79 2 10 211 13 209 2.62e-78 236
Msa0789210 MtrunA17_Chr3g0102221 61.074 149 57 1 12 159 14 162 2.96e-66 202
Msa0789210 MtrunA17_Chr3g0102251 53.933 178 81 1 13 189 15 192 8.61e-66 205
Msa0789210 MtrunA17_Chr2g0298531 51.500 200 92 2 5 199 10 209 1.38e-63 214
Msa0789210 MtrunA17_Chr3g0102131 53.030 198 89 2 12 205 14 211 1.62e-63 214
Msa0789210 MtrunA17_Chr3g0102261 52.284 197 90 2 13 205 15 211 1.44e-62 211
Msa0789210 MtrunA17_Chr8g0382341 49.500 200 96 3 13 211 35 230 6.04e-62 197
Msa0789210 MtrunA17_Chr3g0102281 55.307 179 79 1 12 189 14 192 6.97e-62 209
Msa0789210 MtrunA17_Chr2g0298291 50.500 200 89 3 5 199 10 204 8.56e-62 209
Msa0789210 MtrunA17_Chr3g0102121 53.093 194 87 2 13 202 15 208 9.02e-62 209
Msa0789210 MtrunA17_Chr8g0342791 55.747 174 77 0 17 190 8 181 1.66e-60 206
Msa0789210 MtrunA17_Chr3g0102271 54.749 179 80 1 12 189 14 192 7.80e-60 203
Msa0789210 MtrunA17_Chr4g0020591 58.929 168 68 1 18 185 18 184 8.24e-60 203
Msa0789210 MtrunA17_Chr8g0342741 45.178 197 105 1 12 205 3 199 4.80e-59 195
Msa0789210 MtrunA17_Chr3g0102171 53.631 179 82 1 12 189 14 192 4.88e-59 201
Msa0789210 MtrunA17_Chr4g0018431 49.519 208 97 4 13 213 17 223 1.80e-58 199
Msa0789210 MtrunA17_Chr5g0439951 49.198 187 90 1 9 190 9 195 7.98e-58 197
Msa0789210 MtrunA17_Chr1g0172831 56.287 167 72 1 17 182 18 184 1.46e-57 194
Msa0789210 MtrunA17_Chr3g0119001 49.754 203 94 4 18 213 24 225 2.52e-57 196
Msa0789210 MtrunA17_Chr8g0343681 45.098 204 110 1 2 205 32 233 5.36e-57 188
Msa0789210 MtrunA17_Chr3g0119591 55.422 166 72 2 17 181 12 176 1.22e-56 186
Msa0789210 MtrunA17_Chr8g0350121 53.143 175 77 2 17 189 15 186 2.82e-56 185
Msa0789210 MtrunA17_Chr3g0118981 50.526 190 88 3 18 202 24 212 3.24e-56 193
Msa0789210 MtrunA17_Chr1g0172811 55.689 167 73 1 17 182 18 184 3.31e-56 193
Msa0789210 MtrunA17_Chr8g0342691 49.171 181 89 1 12 189 3 183 8.40e-56 192
Msa0789210 MtrunA17_Chr8g0342781 47.541 183 93 1 12 191 3 185 2.27e-55 186
Msa0789210 MtrunA17_Chr8g0342161 51.124 178 77 4 14 185 14 187 8.89e-55 180
Msa0789210 MtrunA17_Chr8g0342641 50.838 179 83 1 17 190 8 186 1.01e-54 189
Msa0789210 MtrunA17_Chr3g0104861 53.488 172 77 1 9 180 9 177 1.25e-54 186
Msa0789210 MtrunA17_Chr3g0119601 56.627 166 70 2 17 181 12 176 8.20e-54 186
Msa0789210 MtrunA17_Chr8g0350091 49.721 179 85 2 13 189 9 184 8.22e-54 179
Msa0789210 MtrunA17_Chr8g0342911 47.826 184 93 1 9 189 19 202 7.44e-53 183
Msa0789210 MtrunA17_Chr8g0343631 46.190 210 104 3 1 204 18 224 7.50e-53 183
Msa0789210 MtrunA17_Chr8g0342621 51.685 178 81 2 17 189 8 185 8.46e-53 183
Msa0789210 MtrunA17_Chr8g0348541 54.491 167 74 2 16 181 23 188 1.05e-52 183
Msa0789210 MtrunA17_Chr6g0454971 53.143 175 76 3 17 190 49 218 1.07e-52 183
Msa0789210 MtrunA17_Chr6g0455251 52.695 167 78 1 17 182 26 192 3.60e-51 179
Msa0789210 MtrunA17_Chr3g0081531 44.670 197 107 2 17 212 7 202 1.10e-50 177
Msa0789210 MtrunA17_Chr2g0302011 44.175 206 108 3 4 204 21 224 2.73e-50 171
Msa0789210 MtrunA17_Chr8g0342201 49.153 177 83 3 12 183 46 220 8.49e-50 173
Msa0789210 MtrunA17_Chr4g0005351 46.328 177 93 1 6 182 80 254 8.95e-50 168
Msa0789210 MtrunA17_Chr8g0343671 45.050 202 108 2 4 205 44 242 1.86e-49 174
Msa0789210 MtrunA17_Chr8g0353001 50.526 190 89 3 4 189 1 189 2.37e-49 173
Msa0789210 MtrunA17_Chr8g0372681 46.561 189 96 3 4 189 1 187 3.19e-49 172
Msa0789210 MtrunA17_Chr6g0479631 47.126 174 87 3 17 186 18 190 3.75e-49 173
Msa0789210 MtrunA17_Chr8g0338831 48.333 180 87 2 13 186 10 189 5.41e-49 164
Msa0789210 MtrunA17_Chr5g0443781 55.319 141 62 1 18 157 150 290 8.45e-49 163
Msa0789210 MtrunA17_Chr6g0482511 46.237 186 97 3 2 184 17 202 1.03e-48 171
Msa0789210 MtrunA17_Chr2g0296471 44.271 192 98 3 4 186 1 192 1.32e-48 159
Msa0789210 MtrunA17_Chr6g0454961 45.918 196 94 5 16 206 43 231 1.61e-48 171
Msa0789210 MtrunA17_Chr2g0330131 50.000 158 78 1 4 161 1 157 2.04e-48 157
Msa0789210 MtrunA17_Chr8g0351551 50.794 189 80 4 4 185 3 185 3.88e-48 170
Msa0789210 MtrunA17_Chr6g0455551 49.405 168 84 1 16 182 46 213 4.30e-48 170
Msa0789210 MtrunA17_Chr6g0479701 47.977 173 85 3 17 184 22 194 8.26e-48 169
Msa0789210 MtrunA17_Chr4g0005401 46.893 177 92 1 6 182 16 190 1.05e-47 169
Msa0789210 MtrunA17_Chr2g0300251 44.041 193 103 3 18 205 19 211 1.29e-47 168
Msa0789210 MtrunA17_Chr8g0354711 46.199 171 90 2 13 182 5 174 1.42e-47 168
Msa0789210 MtrunA17_Chr6g0455211 48.889 180 77 4 17 182 39 217 1.45e-47 168
Msa0789210 MtrunA17_Chr5g0443861 53.103 145 67 1 14 157 378 522 1.53e-47 165
Msa0789210 MtrunA17_Chr6g0479731 50.581 172 79 4 17 184 18 187 2.07e-47 167
Msa0789210 MtrunA17_Chr6g0481141 43.415 205 104 5 16 214 68 266 2.24e-47 167
Msa0789210 MtrunA17_Chr2g0298301 57.377 122 51 1 5 125 10 131 2.63e-47 153
Msa0789210 MtrunA17_Chr6g0479641 47.953 171 85 2 16 182 17 187 2.75e-47 167
Msa0789210 MtrunA17_Chr4g0041241 48.538 171 86 2 14 183 19 188 2.89e-47 167
Msa0789210 MtrunA17_Chr5g0443751 46.857 175 91 2 17 190 329 502 4.26e-47 163
Msa0789210 MtrunA17_Chr4g0041231 47.953 171 87 2 14 183 19 188 4.31e-47 167
Msa0789210 MtrunA17_Chr6g0455131 47.059 204 93 6 17 206 87 289 7.36e-47 166
Msa0789210 MtrunA17_Chr6g0480521 47.929 169 84 2 16 180 17 185 8.86e-47 166
Msa0789210 MtrunA17_Chr6g0486221 47.027 185 93 3 1 181 1 184 1.04e-46 166
Msa0789210 MtrunA17_Chr4g0041611 45.361 194 101 3 17 206 20 212 1.11e-46 166
Msa0789210 MtrunA17_Chr6g0454821 48.851 174 81 2 17 182 41 214 1.26e-46 166
Msa0789210 MtrunA17_Chr8g0343581 45.304 181 97 1 4 184 51 229 1.27e-46 166
Msa0789210 MtrunA17_Chr7g0243021 41.206 199 115 2 7 204 3 200 1.38e-46 158
Msa0789210 MtrunA17_Chr6g0455221 47.568 185 81 5 8 184 2 178 1.40e-46 165
Msa0789210 MtrunA17_Chr8g0352221 48.352 182 90 2 4 181 1 182 1.49e-46 165
Msa0789210 MtrunA17_Chr5g0420331 47.253 182 83 3 7 182 2 176 1.53e-46 165
Msa0789210 MtrunA17_Chr6g0478771 44.633 177 94 2 14 186 4 180 1.95e-46 165
Msa0789210 MtrunA17_Chr6g0455191 55.944 143 62 1 17 158 317 459 2.08e-46 165
Msa0789210 MtrunA17_Chr6g0455191 46.914 162 83 3 19 178 66 226 4.84e-36 135
Msa0789210 MtrunA17_Chr5g0420341 47.514 181 84 3 7 182 2 176 2.78e-46 164
Msa0789210 MtrunA17_Chr6g0479621 46.821 173 87 3 16 184 19 190 2.91e-46 164
Msa0789210 MtrunA17_Chr4g0041951 46.629 178 93 2 9 185 70 246 2.96e-46 164
Msa0789210 MtrunA17_Chr6g0482111 45.856 181 95 3 4 182 1 180 5.05e-46 164
Msa0789210 MtrunA17_Chr6g0479051 44.633 177 94 2 14 186 4 180 6.81e-46 163
Msa0789210 MtrunA17_Chr7g0242751 41.327 196 113 2 11 205 40 234 7.00e-46 162
Msa0789210 MtrunA17_Chr5g0443941 49.689 161 79 2 18 177 370 529 7.33e-46 160
Msa0789210 MtrunA17_Chr6g0481001 46.667 180 89 4 16 188 19 198 8.59e-46 163
Msa0789210 MtrunA17_Chr4g0005101 46.552 174 91 1 11 184 49 220 1.24e-45 162
Msa0789210 MtrunA17_Chr7g0242801 45.550 191 101 3 17 205 88 277 1.27e-45 162
Msa0789210 MtrunA17_Chr6g0479821 46.512 172 87 3 18 184 20 191 1.28e-45 162
Msa0789210 MtrunA17_Chr8g0371711 44.792 192 102 3 16 205 19 208 1.44e-45 162
Msa0789210 MtrunA17_Chr8g0342221 49.020 153 75 1 9 158 12 164 1.51e-45 161
Msa0789210 MtrunA17_Chr6g0478841 43.503 177 96 2 14 186 4 180 1.82e-45 162
Msa0789210 MtrunA17_Chr6g0480061 48.344 151 73 3 16 161 19 169 1.87e-45 150
Msa0789210 MtrunA17_Chr7g0242811 42.347 196 109 3 17 211 43 235 2.15e-45 162
Msa0789210 MtrunA17_Chr4g0006771 45.604 182 90 4 16 188 18 199 2.58e-45 162
Msa0789210 MtrunA17_Chr6g0480271 47.059 170 86 2 17 182 18 187 2.68e-45 161
Msa0789210 MtrunA17_Chr6g0455031 50.299 167 82 1 17 182 30 196 2.92e-45 162
Msa0789210 MtrunA17_Chr6g0454931 47.692 195 70 7 17 184 50 239 3.16e-45 161
Msa0789210 MtrunA17_Chr6g0481221 45.349 172 89 3 16 183 17 187 3.53e-45 158
Msa0789210 MtrunA17_Chr6g0480451 45.614 171 89 2 16 182 81 251 4.13e-45 161
Msa0789210 MtrunA17_Chr4g0025831 47.953 171 84 3 16 182 17 186 4.18e-45 161
Msa0789210 MtrunA17_Chr2g0299851 44.751 181 98 2 4 182 1 181 4.92e-45 161
Msa0789210 MtrunA17_Chr6g0480911 41.706 211 117 4 1 205 1 211 7.13e-45 160
Msa0789210 MtrunA17_Chr6g0480091 45.977 174 89 3 17 186 18 190 7.27e-45 155
Msa0789210 MtrunA17_Chr6g0478741 44.068 177 95 2 14 186 4 180 7.66e-45 160
Msa0789210 MtrunA17_Chr6g0480041 45.349 172 87 4 16 182 17 186 9.04e-45 160
Msa0789210 MtrunA17_Chr6g0479591 46.114 193 93 4 14 196 15 206 1.21e-44 160
Msa0789210 MtrunA17_Chr5g0443871 47.619 168 82 3 18 184 370 532 1.32e-44 157
Msa0789210 MtrunA17_Chr6g0479671 45.946 185 94 4 6 184 4 188 1.56e-44 159
Msa0789210 MtrunA17_Chr6g0479001 43.503 177 96 2 14 186 4 180 1.66e-44 159
Msa0789210 MtrunA17_Chr7g0248121 45.550 191 93 3 16 196 19 208 1.69e-44 159
Msa0789210 MtrunA17_Chr8g0339031 46.286 175 89 3 13 182 12 186 2.26e-44 159
Msa0789210 MtrunA17_Chr8g0342671 42.703 185 98 2 17 193 9 193 2.35e-44 159
Msa0789210 MtrunA17_Chr8g0342131 44.330 194 101 3 17 205 18 209 2.93e-44 158
Msa0789210 MtrunA17_Chr5g0444331 45.882 170 90 2 18 186 365 533 3.19e-44 155
Msa0789210 MtrunA17_Chr6g0481011 45.556 180 91 4 16 188 22 201 5.93e-44 158
Msa0789210 MtrunA17_Chr7g0248511 45.789 190 92 3 16 195 25 213 7.21e-44 157
Msa0789210 MtrunA17_Chr2g0299881 43.646 181 100 2 4 182 5 185 7.40e-44 157
Msa0789210 MtrunA17_Chr6g0479651 44.118 170 91 2 17 182 20 189 8.31e-44 157
Msa0789210 MtrunA17_Chr6g0464011 45.294 170 87 2 14 182 7 171 1.15e-43 149
Msa0789210 MtrunA17_Chr6g0464011 48.413 126 64 1 7 131 179 304 7.06e-35 126
Msa0789210 MtrunA17_Chr3g0084771 43.023 172 95 3 16 184 14 185 1.19e-43 152
Msa0789210 MtrunA17_Chr5g0430531 43.820 178 95 3 14 186 4 181 1.36e-43 152
Msa0789210 MtrunA17_Chr5g0443931 47.826 161 82 2 18 177 370 529 1.38e-43 154
Msa0789210 MtrunA17_Chr4g0005731 44.199 181 99 1 9 189 2 180 1.61e-43 155
Msa0789210 MtrunA17_Chr7g0256881 42.365 203 113 3 4 205 1 200 1.64e-43 157
Msa0789210 MtrunA17_Chr4g0025701 46.199 171 87 3 16 182 17 186 2.44e-43 155
Msa0789210 MtrunA17_Chr3g0084731 44.134 179 98 2 1 177 1 179 2.54e-43 156
Msa0789210 MtrunA17_Chr7g0248521 46.316 190 90 4 16 195 19 206 2.72e-43 156
Msa0789210 MtrunA17_Chr8g0354701 40.909 198 108 5 16 205 8 204 2.98e-43 156
Msa0789210 MtrunA17_Chr2g0299921 44.262 183 94 4 2 182 4 180 3.24e-43 156
Msa0789210 MtrunA17_Chr4g0010521 49.412 170 84 2 16 184 9 177 3.57e-43 155
Msa0789210 MtrunA17_Chr6g0479781 42.029 207 103 6 16 213 15 213 3.88e-43 145
Msa0789210 MtrunA17_Chr4g0042011 45.087 173 87 3 14 182 21 189 4.06e-43 155
Msa0789210 MtrunA17_Chr2g0299561 49.693 163 75 2 4 159 1 163 4.25e-43 155
Msa0789210 MtrunA17_Chr4g0010651 40.664 241 122 7 16 236 10 249 4.82e-43 155
Msa0789210 MtrunA17_Chr6g0478451 44.509 173 91 3 17 184 20 192 5.92e-43 155
Msa0789210 MtrunA17_Chr4g0041441 45.882 170 90 2 17 185 5 173 5.97e-43 155
Msa0789210 MtrunA17_Chr2g0299791 43.094 181 101 2 4 182 1 181 6.00e-43 155
Msa0789210 MtrunA17_Chr6g0484161 41.981 212 110 4 17 216 18 228 7.90e-43 154
Msa0789210 MtrunA17_Chr6g0486301 46.784 171 89 2 14 183 17 186 8.05e-43 154
Msa0789210 MtrunA17_Chr6g0486271 46.746 169 88 2 14 181 17 184 9.84e-43 153
Msa0789210 MtrunA17_Chr4g0025811 47.368 171 85 3 16 182 17 186 9.87e-43 154
Msa0789210 MtrunA17_Chr6g0486451 40.500 200 116 2 14 210 17 216 1.22e-42 147
Msa0789210 MtrunA17_Chr3g0084151 44.149 188 94 5 16 195 16 200 1.61e-42 154
Msa0789210 MtrunA17_Chr4g0025741 46.199 171 87 3 16 182 17 186 1.81e-42 153
Msa0789210 MtrunA17_Chr6g0480311 46.012 163 84 2 24 182 12 174 2.02e-42 153
Msa0789210 MtrunA17_Chr6g0480951 41.935 186 98 4 16 191 19 204 2.13e-42 146
Msa0789210 MtrunA17_Chr5g0444051 46.154 169 90 1 17 184 188 356 3.15e-42 147
Msa0789210 MtrunA17_Chr5g0444051 37.791 172 99 3 17 181 15 185 4.35e-33 123
Msa0789210 MtrunA17_Chr6g0480181 46.067 178 88 4 4 177 1 174 3.22e-42 152
Msa0789210 MtrunA17_Chr4g0025751 46.199 171 87 3 16 182 17 186 3.38e-42 153
Msa0789210 MtrunA17_Chr6g0480381 41.791 201 104 5 1 188 1 201 3.54e-42 149
Msa0789210 MtrunA17_Chr6g0480461 42.778 180 99 2 7 182 8 187 3.64e-42 152
Msa0789210 MtrunA17_Chr5g0443771 45.062 162 87 2 17 177 225 385 4.47e-42 147
Msa0789210 MtrunA17_Chr3g0084721 43.316 187 99 4 1 184 6 188 4.93e-42 152
Msa0789210 MtrunA17_Chr2g0299841 44.970 169 91 2 16 182 54 222 5.42e-42 152
Msa0789210 MtrunA17_Chr8g0370511 45.556 180 86 4 8 182 3 175 5.44e-42 152
Msa0789210 MtrunA17_Chr6g0454851 45.161 186 75 5 17 184 89 265 6.11e-42 152
Msa0789210 MtrunA17_Chr4g0005261 42.857 175 98 1 8 182 2 174 1.33e-41 151
Msa0789210 MtrunA17_Chr2g0319821 40.957 188 109 2 19 205 46 232 1.34e-41 151
Msa0789210 MtrunA17_Chr6g0485991 44.970 169 87 2 14 181 17 180 1.36e-41 151
Msa0789210 MtrunA17_Chr6g0454951 41.209 182 89 3 17 184 82 259 1.43e-41 151
Msa0789210 MtrunA17_Chr6g0486521 44.086 186 96 3 4 182 1 185 1.58e-41 151
Msa0789210 MtrunA17_Chr4g0005391 45.783 166 88 1 17 182 62 225 1.98e-41 150
Msa0789210 MtrunA17_Chr8g0338901 45.930 172 85 3 17 186 36 201 1.99e-41 150
Msa0789210 MtrunA17_Chr7g0242771 45.752 153 79 2 8 159 7 156 6.81e-41 138
Msa0789210 MtrunA17_Chr1g0146421 43.275 171 92 3 16 182 17 186 1.19e-40 148
Msa0789210 MtrunA17_Chr8g0368251 42.775 173 94 3 16 184 17 188 1.54e-40 148
Msa0789210 MtrunA17_Chr1g0153511 44.444 180 86 4 4 177 1 172 1.78e-40 148
Msa0789210 MtrunA17_Chr4g0005871 46.196 184 79 6 17 188 133 308 1.91e-40 148
Msa0789210 MtrunA17_Chr8g0354681 44.571 175 88 4 17 182 9 183 2.17e-40 147
Msa0789210 MtrunA17_Chr6g0486311 47.853 163 78 2 4 159 1 163 2.35e-40 147
Msa0789210 MtrunA17_Chr5g0443851 49.296 142 71 1 17 157 363 504 2.59e-40 145
Msa0789210 MtrunA17_Chr3g0084851 43.684 190 97 6 4 184 1 189 2.81e-40 147
Msa0789210 MtrunA17_Chr3g0084841 43.158 190 98 6 4 184 1 189 6.61e-40 146
Msa0789210 MtrunA17_Chr6g0454831 42.574 202 101 6 16 206 8 205 7.50e-40 146
Msa0789210 MtrunA17_Chr8g0339021 47.170 159 81 2 25 182 13 169 1.24e-39 145
Msa0789210 MtrunA17_Chr4g0041931 50.340 147 72 1 14 159 20 166 1.31e-39 145
Msa0789210 MtrunA17_Chr5g0442761 45.294 170 88 3 16 180 14 183 1.33e-39 145
Msa0789210 MtrunA17_Chr8g0343801 40.331 181 105 1 13 190 9 189 1.59e-39 143
Msa0789210 MtrunA17_Chr4g0005851 44.608 204 93 7 17 206 37 234 1.67e-39 145
Msa0789210 MtrunA17_Chr8g0354721 44.643 168 90 3 17 181 9 176 1.79e-39 145
Msa0789210 MtrunA17_Chr6g0486361 42.162 185 99 3 4 181 1 184 2.83e-39 144
Msa0789210 MtrunA17_Chr6g0482471 44.886 176 93 3 17 188 12 187 3.28e-39 144
Msa0789210 MtrunA17_Chr5g0394051 38.500 200 116 4 17 213 25 220 3.47e-39 140
Msa0789210 MtrunA17_Chr8g0350801 42.541 181 98 4 14 188 7 187 4.15e-39 144
Msa0789210 MtrunA17_Chr6g0451551 46.835 158 83 1 1 157 3 160 4.50e-39 144
Msa0789210 MtrunA17_Chr6g0451551 40.373 161 93 2 27 184 170 330 1.09e-35 134
Msa0789210 MtrunA17_Chr6g0486731 43.195 169 94 2 14 181 17 184 4.56e-39 144
Msa0789210 MtrunA17_Chr8g0363871 45.070 142 73 2 18 158 18 155 4.60e-39 133
Msa0789210 MtrunA17_Chr3g0085731 41.989 181 95 4 14 186 17 195 4.62e-39 144
Msa0789210 MtrunA17_Chr3g0077971 44.118 170 88 4 17 184 10 174 4.84e-39 144
Msa0789210 MtrunA17_Chr4g0005291 43.575 179 98 2 5 182 59 235 6.04e-39 143
Msa0789210 MtrunA17_Chr6g0482411 46.154 143 71 3 17 158 12 149 1.65e-38 132
Msa0789210 MtrunA17_Chr3g0085541 44.318 176 93 4 11 181 13 188 2.13e-38 141
Msa0789210 MtrunA17_Chr8g0353371 41.530 183 102 3 17 194 11 193 4.56e-38 141
Msa0789210 MtrunA17_Chr4g0005891 40.455 220 100 7 17 206 27 245 6.64e-38 140
Msa0789210 MtrunA17_Chr8g0352211 43.548 186 96 4 4 181 1 185 8.22e-38 140
Msa0789210 MtrunA17_Chr6g0486481 47.917 144 74 1 17 159 20 163 9.63e-38 140
Msa0789210 MtrunA17_Chr8g0338881 44.706 170 90 2 17 182 36 205 9.99e-38 140
Msa0789210 MtrunA17_Chr2g0319851 36.715 207 121 5 5 205 38 240 1.01e-37 140
Msa0789210 MtrunA17_Chr7g0255681 41.463 205 113 3 6 203 1005 1209 1.16e-37 140
Msa0789210 MtrunA17_Chr7g0255681 39.512 205 117 3 6 203 503 707 3.97e-35 132
Msa0789210 MtrunA17_Chr7g0255681 36.111 180 103 6 13 188 16 187 4.90e-21 92.0
Msa0789210 MtrunA17_Chr6g0482161 40.000 170 99 2 16 182 12 181 1.59e-37 138
Msa0789210 MtrunA17_Chr8g0339011 42.286 175 91 3 13 186 10 175 1.85e-37 139
Msa0789210 MtrunA17_Chr6g0482351 41.530 183 103 3 4 184 1 181 2.16e-37 139
Msa0789210 MtrunA17_Chr2g0319921 44.737 152 83 1 9 159 48 199 2.34e-37 139
Msa0789210 MtrunA17_Chr5g0414681 41.667 180 78 4 7 159 2 181 3.87e-37 129
Msa0789210 MtrunA17_Chr6g0482321 44.444 171 89 4 17 184 12 179 4.39e-37 138
Msa0789210 MtrunA17_Chr4g0009241 41.667 180 103 2 4 182 536 714 6.69e-37 137
Msa0789210 MtrunA17_Chr4g0009241 27.727 220 130 8 17 209 19 236 9.66e-12 64.7
Msa0789210 MtrunA17_Chr8g0338981 40.217 184 100 4 13 193 10 186 7.93e-37 137
Msa0789210 MtrunA17_Chr4g0009401 45.455 154 83 1 6 158 494 647 8.26e-37 137
Msa0789210 MtrunA17_Chr4g0010711 41.969 193 95 4 6 188 508 693 9.32e-37 137
Msa0789210 MtrunA17_Chr4g0010711 34.211 152 92 3 12 158 11 159 2.73e-21 92.8
Msa0789210 MtrunA17_Chr4g0005331 39.548 177 95 1 6 182 80 244 9.74e-37 137
Msa0789210 MtrunA17_Chr4g0009171 43.678 174 96 2 10 182 726 898 1.22e-36 137
Msa0789210 MtrunA17_Chr4g0009171 39.881 168 101 0 15 182 5 172 7.40e-32 123
Msa0789210 MtrunA17_Chr1g0172541 43.182 176 91 4 17 188 10 180 1.45e-36 137
Msa0789210 MtrunA17_Chr4g0041941 42.614 176 98 3 12 185 4 178 1.94e-36 136
Msa0789210 MtrunA17_Chr6g0482141 37.313 201 110 3 17 216 18 203 6.23e-36 135
Msa0789210 MtrunA17_Chr4g0009301 47.552 143 74 1 17 158 546 688 9.78e-36 134
Msa0789210 MtrunA17_Chr4g0009301 31.481 162 98 7 6 157 15 173 9.94e-15 73.6
Msa0789210 MtrunA17_Chr6g0482441 37.273 220 105 7 14 231 7 195 2.70e-35 133
Msa0789210 MtrunA17_Chr4g0009141 40.237 169 96 2 17 184 526 690 3.04e-35 133
Msa0789210 MtrunA17_Chr4g0009271 42.500 160 88 3 3 158 11 170 3.33e-35 124
Msa0789210 MtrunA17_Chr4g0009101 37.561 205 121 3 6 203 533 737 8.58e-35 131
Msa0789210 MtrunA17_Chr6g0478991 48.333 120 61 1 14 132 4 123 9.40e-35 121
Msa0789210 MtrunA17_Chr6g0482491 41.848 184 93 7 10 188 2 176 2.29e-34 130
Msa0789210 MtrunA17_Chr6g0455121 51.818 110 53 0 50 159 15 124 2.98e-34 120
Msa0789210 MtrunA17_Chr4g0009041 44.654 159 82 4 4 158 500 656 4.99e-34 129
Msa0789210 MtrunA17_Chr6g0480971 40.667 150 84 3 40 184 31 180 3.58e-33 120
Msa0789210 MtrunA17_Chr7g0223531 39.548 177 96 4 17 182 10 186 5.55e-33 126
Msa0789210 MtrunA17_Chr6g0481331 40.217 184 101 5 3 177 41 224 7.30e-33 126
Msa0789210 MtrunA17_Chr2g0319911 41.781 146 84 1 9 153 39 184 1.52e-32 117
Msa0789210 MtrunA17_Chr6g0474761 44.872 156 83 2 5 157 3 158 3.00e-32 124
Msa0789210 MtrunA17_Chr6g0480151 38.596 171 96 3 18 182 19 186 4.92e-32 123
Msa0789210 MtrunA17_Chr6g0474801 44.231 156 84 2 5 157 3 158 1.14e-31 122
Msa0789210 MtrunA17_Chr8g0353351 41.758 182 88 7 17 196 15 180 3.69e-29 114
Msa0789210 MtrunA17_Chr8g0353361 41.209 182 89 8 17 196 15 180 3.99e-29 114
Msa0789210 MtrunA17_Chr4g0005591 34.783 184 99 4 17 188 78 252 1.13e-27 111
Msa0789210 MtrunA17_Chr6g0454921 56.977 86 36 1 18 102 123 208 1.70e-27 104
Msa0789210 MtrunA17_Chr6g0479831 40.496 121 69 1 40 157 62 182 3.05e-27 104
Msa0789210 MtrunA17_Chr8g0363591 49.057 106 52 1 139 244 1 104 2.29e-26 99.4
Msa0789210 MtrunA17_Chr5g0443951 53.488 86 40 0 50 135 3 88 3.62e-25 96.3
Msa0789210 MtrunA17_Chr5g0443961 49.020 102 49 2 4 104 161 260 3.75e-24 97.8
Msa0789210 MtrunA17_Chr5g0443961 38.889 108 65 1 74 181 63 169 6.82e-21 89.0
Msa0789210 MtrunA17_Chr8g0353401 39.161 143 83 3 17 157 12 152 9.60e-24 99.4
Msa0789210 MtrunA17_Chr8g0363271 50.000 106 51 1 139 244 1 104 2.25e-23 91.3
Msa0789210 MtrunA17_Chr4g0005381 46.053 76 40 1 4 78 77 152 2.99e-16 73.6
Msa0789210 MtrunA17_Chr8g0338851 43.478 92 48 2 95 182 1 92 3.70e-16 77.0
Msa0789210 MtrunA17_Chr5g0443921 56.923 65 27 1 19 82 25 89 1.16e-15 70.5
Msa0789210 MtrunA17_Chr2g0281751 30.636 173 100 6 12 181 8 163 7.79e-15 70.1
Msa0789210 MtrunA17_Chr8g0353431 30.682 176 93 8 15 181 13 168 8.09e-13 67.4
Msa0789210 MtrunA17_Chr4g0047801 30.841 107 69 2 18 123 7 109 2.74e-12 63.2
Msa0789210 MtrunA17_Chr7g0234891 34.711 121 71 4 88 201 1 120 1.93e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789210 AT2G20142.1 47.337 169 84 2 13 181 5 168 7.94e-49 163
Msa0789210 AT1G63880.2 41.584 202 116 1 4 205 1 200 2.02e-44 159
Msa0789210 AT1G63880.1 41.584 202 116 1 4 205 1 200 5.04e-44 158
Msa0789210 AT5G18350.1 45.312 192 99 3 2 190 3 191 5.17e-44 158
Msa0789210 AT1G63730.1 43.750 208 102 5 4 205 1 199 2.32e-43 156
Msa0789210 AT1G64070.1 43.814 194 97 3 17 205 14 200 2.40e-43 156
Msa0789210 AT3G04220.2 40.838 191 108 3 17 205 63 250 7.43e-43 154
Msa0789210 AT3G04220.1 40.838 191 108 3 17 205 63 250 9.53e-43 154
Msa0789210 AT3G04220.3 40.838 191 108 3 17 205 63 250 1.00e-42 154
Msa0789210 AT1G65850.1 42.781 187 92 4 2 183 21 197 6.19e-42 152
Msa0789210 AT5G18370.1 38.776 196 118 1 16 211 60 253 8.12e-42 152
Msa0789210 AT5G36930.4 45.699 186 94 6 4 186 1 182 1.07e-41 152
Msa0789210 AT5G36930.1 45.699 186 94 6 4 186 1 182 1.07e-41 152
Msa0789210 AT5G36930.2 45.699 186 94 6 4 186 4 185 1.09e-41 152
Msa0789210 AT5G36930.3 45.699 186 94 6 4 186 1 182 1.14e-41 152
Msa0789210 AT1G72930.1 47.273 165 82 4 17 180 9 169 1.28e-41 140
Msa0789210 AT5G58120.1 41.753 194 101 3 17 205 15 201 1.79e-41 151
Msa0789210 AT4G16990.1 47.159 176 87 2 6 181 2 171 2.87e-41 149
Msa0789210 AT5G41750.1 42.365 203 112 4 4 205 1 199 2.94e-41 150
Msa0789210 AT5G41750.2 42.365 203 112 4 4 205 1 199 2.94e-41 150
Msa0789210 AT4G16990.6 47.159 176 87 2 6 181 2 171 3.00e-41 149
Msa0789210 AT4G16990.11 47.159 176 87 2 6 181 2 171 3.00e-41 149
Msa0789210 AT1G65850.2 43.931 173 85 3 16 183 47 212 3.28e-41 150
Msa0789210 AT4G14370.2 40.722 194 103 3 17 205 14 200 4.30e-41 150
Msa0789210 AT4G14370.3 40.722 194 103 3 17 205 14 200 4.30e-41 150
Msa0789210 AT4G16990.12 47.159 176 87 2 6 181 2 171 4.99e-41 149
Msa0789210 AT4G16990.7 47.159 176 87 2 6 181 2 171 4.99e-41 149
Msa0789210 AT4G16990.17 47.159 176 87 2 6 181 2 171 5.87e-41 149
Msa0789210 AT4G16990.10 47.159 176 87 2 6 181 2 171 5.87e-41 149
Msa0789210 AT4G16990.13 47.159 176 87 2 6 181 2 171 6.88e-41 149
Msa0789210 AT4G16990.2 47.159 176 87 2 6 181 2 171 6.88e-41 149
Msa0789210 AT4G16860.1 45.455 165 88 1 17 181 13 175 7.64e-41 149
Msa0789210 AT1G63860.6 41.463 205 115 2 1 205 1 200 8.17e-41 149
Msa0789210 AT1G63860.1 41.463 205 115 2 1 205 1 200 8.33e-41 149
Msa0789210 AT1G63860.2 41.463 205 115 2 1 205 1 200 8.70e-41 149
Msa0789210 AT1G63860.4 41.463 205 115 2 1 205 1 200 8.92e-41 149
Msa0789210 AT1G63860.5 41.463 205 115 2 1 205 1 200 8.92e-41 149
Msa0789210 AT1G63860.3 41.463 205 115 2 1 205 1 200 8.92e-41 149
Msa0789210 AT2G16870.1 40.758 211 103 5 4 205 1 198 9.03e-41 149
Msa0789210 AT4G16990.8 47.879 165 84 1 17 181 76 238 9.17e-41 149
Msa0789210 AT1G72860.3 44.444 207 105 5 4 206 1 201 1.18e-40 149
Msa0789210 AT1G69550.1 44.311 167 91 2 15 181 78 242 1.35e-40 149
Msa0789210 AT1G72860.1 44.444 207 105 5 4 206 1 201 1.40e-40 149
Msa0789210 AT1G72860.2 44.444 207 105 5 4 206 1 201 1.49e-40 149
Msa0789210 AT1G56520.5 40.476 210 120 3 4 212 1 206 1.85e-40 147
Msa0789210 AT1G56540.1 41.753 194 101 3 17 205 15 201 2.36e-40 148
Msa0789210 AT1G56510.1 41.872 203 113 3 4 205 1 199 3.60e-40 147
Msa0789210 AT1G56520.2 40.476 210 120 3 4 212 1 206 3.79e-40 147
Msa0789210 AT4G16920.9 42.935 184 98 2 4 187 1 177 3.93e-40 147
Msa0789210 AT4G16920.6 42.935 184 98 2 4 187 1 177 3.97e-40 147
Msa0789210 AT4G16920.1 42.935 184 98 2 4 187 1 177 4.01e-40 147
Msa0789210 AT4G16920.4 42.935 184 98 2 4 187 1 177 4.38e-40 147
Msa0789210 AT4G16920.7 42.935 184 98 2 4 187 1 177 4.38e-40 147
Msa0789210 AT1G56520.1 40.476 210 120 3 4 212 1 206 4.41e-40 147
Msa0789210 AT1G72900.1 42.718 206 104 7 9 204 2 203 4.42e-40 142
Msa0789210 AT1G56520.4 40.476 210 120 3 4 212 1 206 4.78e-40 147
Msa0789210 AT5G41550.1 40.976 205 115 4 7 210 5 204 4.93e-40 147
Msa0789210 AT4G16920.3 42.935 184 98 2 4 187 1 177 5.59e-40 147
Msa0789210 AT4G16920.5 42.935 184 98 2 4 187 1 177 5.59e-40 147
Msa0789210 AT4G16920.2 42.935 184 98 2 4 187 1 177 5.60e-40 147
Msa0789210 AT4G16920.8 42.935 184 98 2 4 187 1 177 5.60e-40 147
Msa0789210 AT1G72920.1 46.552 174 89 4 10 181 2 173 5.74e-40 139
Msa0789210 AT5G22690.3 44.578 166 90 1 17 182 10 173 8.38e-40 146
Msa0789210 AT5G22690.4 44.578 166 90 1 17 182 10 173 8.85e-40 146
Msa0789210 AT1G66090.1 40.107 187 110 1 19 205 28 212 9.69e-40 142
Msa0789210 AT4G16950.2 43.333 180 98 2 4 181 1 178 1.03e-39 146
Msa0789210 AT5G22690.2 44.578 166 90 1 17 182 10 173 1.09e-39 146
Msa0789210 AT4G16950.1 43.333 180 98 2 4 181 1 178 1.12e-39 146
Msa0789210 AT1G72950.1 41.860 215 109 8 8 212 4 212 1.12e-39 141
Msa0789210 AT4G16950.6 43.333 180 98 2 4 181 1 178 1.13e-39 146
Msa0789210 AT4G16950.3 43.333 180 98 2 4 181 1 178 1.14e-39 146
Msa0789210 AT5G44510.3 42.857 175 98 1 17 191 40 212 1.14e-39 146
Msa0789210 AT5G22690.1 44.578 166 90 1 17 182 10 173 1.15e-39 146
Msa0789210 AT5G44510.2 42.857 175 98 1 17 191 40 212 1.32e-39 145
Msa0789210 AT5G44510.1 42.857 175 98 1 17 191 40 212 1.32e-39 145
Msa0789210 AT5G44510.4 42.857 175 98 1 17 191 40 212 1.34e-39 145
Msa0789210 AT4G16950.5 43.333 180 98 2 4 181 1 178 1.37e-39 145
Msa0789210 AT4G16950.4 43.333 180 98 2 4 181 1 178 1.49e-39 145
Msa0789210 AT4G16960.1 44.311 167 89 2 17 181 13 177 1.69e-39 145
Msa0789210 AT5G41540.1 41.709 199 112 3 8 205 2 197 1.86e-39 145
Msa0789210 AT1G72930.2 49.315 146 70 3 17 161 9 151 2.28e-39 134
Msa0789210 AT1G72910.1 47.879 165 81 4 17 180 9 169 2.62e-39 140
Msa0789210 AT4G11170.1 39.269 219 108 5 4 212 1 204 3.51e-39 144
Msa0789210 AT1G72940.1 47.093 172 86 5 13 181 4 173 1.23e-38 138
Msa0789210 AT1G63750.3 39.320 206 122 2 1 205 1 204 1.32e-38 143
Msa0789210 AT1G63740.2 41.237 194 102 3 17 205 42 228 1.55e-38 142
Msa0789210 AT5G11250.2 42.593 162 91 1 16 177 61 220 2.19e-38 142
Msa0789210 AT5G46490.1 37.864 206 113 4 4 205 1 195 3.31e-38 137
Msa0789210 AT4G12010.1 39.698 199 117 3 9 205 3 200 4.75e-38 141
Msa0789210 AT4G16990.9 48.101 158 80 1 24 181 16 171 5.19e-38 141
Msa0789210 AT3G44480.2 41.566 166 95 1 17 182 98 261 9.73e-38 140
Msa0789210 AT3G44480.4 41.566 166 95 1 17 182 98 261 1.04e-37 140
Msa0789210 AT3G44480.1 41.566 166 95 1 17 182 98 261 1.04e-37 140
Msa0789210 AT3G44480.3 41.566 166 95 1 17 182 98 261 1.29e-37 140
Msa0789210 AT3G44480.5 41.566 166 95 1 17 182 98 261 1.29e-37 140
Msa0789210 AT1G27170.1 40.237 169 99 2 17 184 14 181 1.72e-37 140
Msa0789210 AT3G44630.2 41.566 166 95 1 17 182 94 257 1.82e-37 139
Msa0789210 AT3G44630.1 41.566 166 95 1 17 182 94 257 1.82e-37 139
Msa0789210 AT3G44630.4 41.566 166 95 1 17 182 94 257 1.82e-37 139
Msa0789210 AT3G44630.3 41.566 166 95 1 17 182 94 257 2.00e-37 139
Msa0789210 AT5G40910.1 41.089 202 115 2 4 205 1 198 2.53e-37 139
Msa0789210 AT5G40910.9 41.089 202 115 2 4 205 1 198 2.53e-37 139
Msa0789210 AT4G19500.1 44.242 165 90 1 17 181 11 173 2.82e-37 139
Msa0789210 AT5G46470.1 36.649 191 117 2 16 205 13 200 2.91e-37 139
Msa0789210 AT5G46510.2 43.030 165 91 2 17 181 9 170 2.96e-37 139
Msa0789210 AT3G44400.2 38.710 186 110 3 17 202 48 229 3.25e-37 139
Msa0789210 AT3G44400.1 38.710 186 110 3 17 202 48 229 3.25e-37 139
Msa0789210 AT3G44400.4 38.710 186 110 3 17 202 48 229 3.25e-37 139
Msa0789210 AT3G44400.5 38.710 186 110 3 17 202 48 229 3.25e-37 139
Msa0789210 AT3G44400.3 38.710 186 110 3 17 202 48 229 3.25e-37 139
Msa0789210 AT5G46510.1 43.030 165 91 2 17 181 9 170 3.27e-37 139
Msa0789210 AT5G46270.2 37.864 206 113 4 4 205 1 195 4.44e-37 138
Msa0789210 AT5G46270.3 37.864 206 113 4 4 205 1 195 4.53e-37 138
Msa0789210 AT5G46260.1 38.614 202 117 3 4 205 1 195 5.14e-37 138
Msa0789210 AT4G08450.2 41.899 179 93 4 4 181 1 169 6.93e-37 138
Msa0789210 AT4G08450.1 41.899 179 93 4 4 181 1 169 8.18e-37 138
Msa0789210 AT5G46490.8 38.119 202 118 3 4 205 1 195 9.61e-37 136
Msa0789210 AT5G51630.3 44.382 178 94 2 4 181 1 173 1.33e-36 137
Msa0789210 AT5G51630.1 44.382 178 94 2 4 181 1 173 1.39e-36 137
Msa0789210 AT5G17970.1 41.117 197 99 3 17 205 16 203 1.44e-36 137
Msa0789210 AT5G46490.2 38.119 202 118 3 4 205 1 195 1.83e-36 137
Msa0789210 AT2G14080.1 40.698 172 90 3 17 183 56 220 1.98e-36 137
Msa0789210 AT1G63870.1 37.561 205 126 2 1 205 1 203 2.05e-36 136
Msa0789210 AT5G46270.1 37.306 193 108 3 17 205 23 206 2.23e-36 136
Msa0789210 AT5G46270.5 37.306 193 108 3 17 205 23 206 2.23e-36 136
Msa0789210 AT5G17680.1 40.212 189 103 4 18 205 19 198 2.24e-36 136
Msa0789210 AT5G46270.4 37.306 193 108 3 17 205 23 206 2.35e-36 136
Msa0789210 AT3G04210.2 38.235 170 103 1 13 182 62 229 4.39e-36 134
Msa0789210 AT3G04210.1 38.235 170 103 1 13 182 62 229 4.39e-36 134
Msa0789210 AT5G46490.7 37.566 189 113 2 17 205 52 235 6.23e-36 134
Msa0789210 AT5G46490.5 37.566 189 113 2 17 205 52 235 6.23e-36 134
Msa0789210 AT5G46490.3 37.566 189 113 2 17 205 69 252 7.29e-36 134
Msa0789210 AT3G44670.1 41.566 166 95 1 17 182 94 257 7.37e-36 135
Msa0789210 AT3G44670.2 41.566 166 95 1 17 182 94 257 7.37e-36 135
Msa0789210 AT5G46450.3 38.636 176 106 1 16 191 12 185 8.33e-36 135
Msa0789210 AT5G17680.2 39.153 189 106 3 18 205 19 199 8.43e-36 135
Msa0789210 AT5G38850.1 43.094 181 83 3 17 190 9 176 8.90e-36 135
Msa0789210 AT5G46450.1 38.636 176 106 1 16 191 12 185 9.23e-36 135
Msa0789210 AT5G46490.6 37.566 189 113 2 17 205 52 235 9.33e-36 134
Msa0789210 AT5G46490.4 37.566 189 113 2 17 205 69 252 1.04e-35 134
Msa0789210 AT5G46450.2 38.636 176 106 1 16 191 12 185 1.06e-35 134
Msa0789210 AT5G18360.1 37.768 233 112 8 17 227 16 237 1.64e-35 134
Msa0789210 AT5G49140.1 40.722 194 106 4 17 206 15 203 1.77e-35 134
Msa0789210 AT1G17600.1 46.199 171 86 3 9 177 3 169 2.91e-35 133
Msa0789210 AT1G31540.3 41.530 183 91 4 4 181 1 172 3.12e-35 133
Msa0789210 AT1G31540.1 41.530 183 91 4 4 181 1 172 3.12e-35 133
Msa0789210 AT4G16900.3 41.011 178 101 2 4 181 1 174 3.37e-35 132
Msa0789210 AT1G31540.2 41.530 183 91 4 4 181 1 172 4.79e-35 132
Msa0789210 AT4G16890.5 41.758 182 89 4 4 180 3 172 4.96e-35 132
Msa0789210 AT4G16890.3 41.758 182 89 4 4 180 3 172 5.06e-35 132
Msa0789210 AT4G16900.1 41.011 178 101 2 4 181 1 174 5.42e-35 132
Msa0789210 AT4G16890.2 41.758 182 89 4 4 180 12 181 5.63e-35 132
Msa0789210 AT4G16890.1 41.758 182 89 4 4 180 12 181 5.78e-35 132
Msa0789210 AT4G16900.2 41.011 178 101 2 4 181 1 174 6.66e-35 132
Msa0789210 AT5G46520.1 41.011 178 98 3 4 181 1 171 7.83e-35 132
Msa0789210 AT4G14370.1 41.104 163 84 3 48 205 2 157 1.33e-34 131
Msa0789210 AT5G46520.2 40.361 166 94 2 16 181 49 209 6.57e-34 129
Msa0789210 AT5G41740.1 40.000 190 97 4 17 205 16 189 1.20e-33 129
Msa0789210 AT5G41740.2 40.000 190 97 4 17 205 16 189 1.59e-33 128
Msa0789210 AT1G17615.1 42.373 177 94 5 3 174 2 175 5.14e-33 123
Msa0789210 AT1G63740.1 42.331 163 82 3 48 205 2 157 1.25e-32 125
Msa0789210 AT5G38344.1 38.194 144 87 1 14 157 57 198 2.47e-32 117
Msa0789210 AT1G72890.1 39.801 201 107 7 13 204 36 231 2.69e-32 122
Msa0789210 AT5G48770.1 39.791 191 108 4 17 205 14 199 3.61e-32 124
Msa0789210 AT5G38340.3 34.872 195 114 3 17 205 57 244 6.65e-32 124
Msa0789210 AT5G38340.1 34.872 195 114 3 17 205 57 244 6.65e-32 124
Msa0789210 AT1G27170.2 36.905 168 102 3 18 184 17 181 7.81e-32 123
Msa0789210 AT4G36150.1 38.674 181 106 3 13 193 17 192 1.05e-31 123
Msa0789210 AT5G45070.1 37.013 154 96 1 4 157 1 153 1.84e-31 119
Msa0789210 AT4G04110.1 40.230 174 99 4 19 191 45 214 2.06e-31 116
Msa0789210 AT5G48780.2 42.771 166 80 4 19 177 14 171 2.94e-31 121
Msa0789210 AT5G48780.1 42.771 166 80 4 19 177 14 171 3.15e-31 121
Msa0789210 AT1G57850.1 35.976 164 100 4 15 177 10 169 3.91e-31 114
Msa0789210 AT5G40100.1 42.593 162 89 2 17 177 12 170 5.17e-31 121
Msa0789210 AT4G09430.1 36.232 207 122 5 4 208 1 199 5.83e-31 120
Msa0789210 AT1G27180.5 38.411 151 89 3 17 165 12 160 6.19e-31 120
Msa0789210 AT1G27180.8 38.411 151 89 3 17 165 12 160 6.19e-31 120
Msa0789210 AT1G27180.1 38.411 151 89 3 17 165 176 324 7.33e-31 120
Msa0789210 AT1G27180.1 37.838 148 79 5 18 160 18 157 4.29e-22 95.5
Msa0789210 AT1G72840.2 36.548 197 120 3 17 212 15 207 7.81e-31 120
Msa0789210 AT1G72840.3 36.548 197 120 3 17 212 15 207 7.81e-31 120
Msa0789210 AT1G72840.1 36.548 197 120 3 17 212 15 207 9.42e-31 120
Msa0789210 AT4G19510.8 36.612 183 115 1 18 200 58 239 1.28e-30 120
Msa0789210 AT4G19510.1 36.612 183 115 1 18 200 58 239 1.28e-30 120
Msa0789210 AT4G19530.2 32.618 233 138 9 13 238 12 232 1.39e-30 120
Msa0789210 AT4G19510.3 36.612 183 115 1 18 200 58 239 1.43e-30 119
Msa0789210 AT4G19530.1 32.618 233 138 9 13 238 12 232 1.47e-30 120
Msa0789210 AT4G19510.2 36.612 183 115 1 18 200 18 199 1.49e-30 119
Msa0789210 AT4G19510.5 36.612 183 115 1 18 200 58 239 1.50e-30 120
Msa0789210 AT4G19510.4 36.612 183 115 1 18 200 58 239 1.50e-30 120
Msa0789210 AT4G19510.7 36.612 183 115 1 18 200 58 239 1.50e-30 120
Msa0789210 AT4G19510.9 36.612 183 115 1 18 200 58 239 1.52e-30 119
Msa0789210 AT4G19510.10 36.612 183 115 1 18 200 18 199 1.58e-30 119
Msa0789210 AT4G19510.6 36.612 183 115 1 18 200 58 239 1.77e-30 119
Msa0789210 AT4G19520.2 39.227 181 95 7 4 181 1391 1559 2.18e-30 119
Msa0789210 AT4G19520.2 36.000 200 112 5 18 212 6 194 1.17e-24 102
Msa0789210 AT4G19520.4 39.227 181 95 7 4 181 1391 1559 2.18e-30 119
Msa0789210 AT4G19520.4 36.000 200 112 5 18 212 6 194 1.17e-24 102
Msa0789210 AT4G19520.1 39.227 181 95 7 4 181 1391 1559 2.28e-30 119
Msa0789210 AT4G19520.1 36.000 200 112 5 18 212 6 194 9.70e-25 103
Msa0789210 AT1G72890.2 44.737 152 79 4 13 163 36 183 4.00e-30 117
Msa0789210 AT4G16940.6 43.704 135 72 2 49 181 1 133 5.39e-30 118
Msa0789210 AT4G16940.2 43.704 135 72 2 49 181 1 133 5.40e-30 118
Msa0789210 AT4G16940.3 43.704 135 72 2 49 181 1 133 5.40e-30 118
Msa0789210 AT4G16940.5 43.704 135 72 2 49 181 1 133 5.40e-30 118
Msa0789210 AT4G16940.1 43.704 135 72 2 49 181 1 133 7.10e-30 117
Msa0789210 AT4G16940.4 43.704 135 72 2 49 181 1 133 7.11e-30 117
Msa0789210 AT4G19920.1 34.524 168 108 2 18 184 51 217 2.29e-29 111
Msa0789210 AT5G45060.2 38.824 170 100 2 4 173 1 166 3.39e-29 115
Msa0789210 AT5G45060.1 38.824 170 100 2 4 173 1 166 3.39e-29 115
Msa0789210 AT1G57850.3 38.194 144 84 4 15 157 10 149 4.45e-29 107
Msa0789210 AT5G11250.3 41.176 136 78 1 42 177 5 138 5.02e-29 115
Msa0789210 AT5G11250.1 41.176 136 78 1 42 177 5 138 5.02e-29 115
Msa0789210 AT5G45000.1 35.000 180 115 2 9 188 8 185 2.96e-28 111
Msa0789210 AT5G45000.1 28.090 178 124 2 2 177 202 377 6.14e-14 70.9
Msa0789210 AT1G57630.1 42.568 148 78 4 17 161 22 165 3.77e-28 105
Msa0789210 AT1G57670.1 32.370 173 114 2 12 184 4 173 7.64e-28 109
Msa0789210 AT1G47370.1 31.500 200 124 5 11 210 10 196 1.13e-27 108
Msa0789210 AT5G45200.3 38.172 186 106 3 4 184 1 182 1.26e-27 111
Msa0789210 AT5G45200.1 38.172 186 106 3 4 184 1 182 2.33e-27 110
Msa0789210 AT3G51570.2 34.225 187 109 5 7 186 5 184 3.32e-27 110
Msa0789210 AT5G44870.1 34.831 178 112 2 7 184 2 175 3.68e-27 110
Msa0789210 AT3G51570.1 34.225 187 109 5 7 186 5 184 3.82e-27 110
Msa0789210 AT2G32140.1 33.728 169 109 2 18 184 22 189 5.06e-27 107
Msa0789210 AT4G19520.3 40.741 162 82 6 4 163 1391 1540 5.36e-27 109
Msa0789210 AT4G19520.3 36.000 200 112 5 18 212 6 194 1.02e-24 103
Msa0789210 AT4G19520.5 40.741 162 82 6 4 163 1391 1540 5.57e-27 109
Msa0789210 AT4G19520.5 36.000 200 112 5 18 212 6 194 1.15e-24 102
Msa0789210 AT5G45250.1 36.170 188 103 5 4 184 1 178 2.23e-26 107
Msa0789210 AT5G45210.4 38.922 167 92 5 18 182 36 194 3.23e-26 107
Msa0789210 AT5G45210.1 38.922 167 92 5 18 182 8 166 3.37e-26 107
Msa0789210 AT5G45210.5 38.922 167 92 5 18 182 27 185 3.44e-26 107
Msa0789210 AT5G45210.3 38.922 167 92 5 18 182 36 194 3.61e-26 106
Msa0789210 AT5G45210.2 38.922 167 92 5 18 182 36 194 4.54e-26 106
Msa0789210 AT5G45220.2 33.136 169 110 2 18 184 332 499 1.57e-25 104
Msa0789210 AT5G45220.2 28.729 181 120 4 1 181 1 172 9.64e-20 88.2
Msa0789210 AT5G44900.1 31.977 172 114 2 13 184 16 184 2.25e-25 100
Msa0789210 AT1G51270.5 32.240 183 115 3 1 177 168 347 2.43e-25 102
Msa0789210 AT1G51270.13 32.240 183 115 3 1 177 167 346 2.47e-25 102
Msa0789210 AT1G51270.12 32.240 183 115 3 1 177 167 346 2.47e-25 102
Msa0789210 AT1G51270.14 32.240 183 115 3 1 177 167 346 2.47e-25 102
Msa0789210 AT1G51270.11 32.240 183 115 3 1 177 167 346 2.47e-25 102
Msa0789210 AT1G51270.4 32.240 183 115 3 1 177 98 277 4.38e-25 102
Msa0789210 AT2G03300.1 33.125 160 104 2 18 177 8 164 5.08e-25 98.6
Msa0789210 AT1G51270.15 32.240 183 115 3 1 177 167 346 7.83e-25 102
Msa0789210 AT1G51270.8 32.240 183 115 3 1 177 338 517 1.75e-24 102
Msa0789210 AT1G51270.2 32.240 183 115 3 1 177 338 517 1.75e-24 102
Msa0789210 AT1G51270.3 32.240 183 115 3 1 177 338 517 1.81e-24 102
Msa0789210 AT1G51270.9 32.240 183 115 3 1 177 290 469 2.16e-24 101
Msa0789210 AT1G51270.6 32.240 183 115 3 1 177 290 469 2.16e-24 101
Msa0789210 AT1G51270.7 32.240 183 115 3 1 177 290 469 2.16e-24 101
Msa0789210 AT1G51270.10 32.240 183 115 3 1 177 290 469 2.16e-24 101
Msa0789210 AT1G60320.1 33.758 157 101 2 1 157 8 161 3.04e-24 95.5
Msa0789210 AT5G17880.1 35.870 184 108 4 4 182 1 179 4.11e-24 101
Msa0789210 AT5G17880.2 35.870 184 108 4 4 182 1 179 4.52e-24 101
Msa0789210 AT1G72870.1 38.547 179 101 6 17 190 10 184 5.06e-24 100
Msa0789210 AT2G03030.1 33.750 160 103 2 18 177 8 164 6.78e-24 95.5
Msa0789210 AT5G45080.1 37.419 155 95 2 4 157 1 154 8.07e-24 99.0
Msa0789210 AT4G23515.2 30.939 181 112 4 15 184 7 185 2.60e-23 95.9
Msa0789210 AT4G23515.1 31.461 178 109 4 15 181 7 182 3.36e-23 96.3
Msa0789210 AT5G45220.1 35.036 137 88 1 18 154 332 467 3.59e-23 98.2
Msa0789210 AT5G45220.1 28.729 181 120 4 1 181 1 172 9.86e-20 88.2
Msa0789210 AT4G36140.1 33.333 204 123 3 17 220 50 240 5.62e-23 98.2
Msa0789210 AT4G36140.1 36.306 157 76 3 26 181 443 576 3.75e-19 87.0
Msa0789210 AT1G65390.2 36.879 141 82 3 18 155 23 159 7.47e-23 94.0
Msa0789210 AT1G65390.3 35.507 138 88 1 18 155 23 159 9.23e-23 94.4
Msa0789210 AT1G27180.3 36.601 153 84 5 18 165 18 162 3.32e-22 95.9
Msa0789210 AT1G27180.2 36.601 153 84 5 18 165 18 162 3.36e-22 95.9
Msa0789210 AT1G65390.1 35.507 138 88 1 18 155 23 159 4.81e-22 94.4
Msa0789210 AT2G17060.2 29.187 209 138 3 18 226 19 217 5.07e-22 95.1
Msa0789210 AT1G57830.1 35.172 145 91 2 19 163 23 164 5.17e-22 89.7
Msa0789210 AT2G17060.1 29.187 209 138 3 18 226 19 217 5.87e-22 95.1
Msa0789210 AT1G09665.1 32.468 154 97 3 4 157 1 147 8.84e-22 89.0
Msa0789210 AT1G51270.1 32.911 158 97 3 1 152 338 492 1.82e-21 93.2
Msa0789210 AT4G11340.1 30.435 230 130 6 13 217 222 446 3.02e-21 92.4
Msa0789210 AT3G51560.1 35.233 193 100 7 15 205 3 172 4.07e-21 92.4
Msa0789210 AT5G51630.5 42.727 110 61 1 72 181 2 109 4.69e-21 92.4
Msa0789210 AT5G45230.1 32.000 175 110 3 18 184 12 185 5.15e-21 92.4
Msa0789210 AT5G51630.4 42.727 110 61 1 72 181 2 109 5.72e-21 92.0
Msa0789210 AT5G51630.6 42.727 110 61 1 72 181 2 109 5.72e-21 92.0
Msa0789210 AT5G51630.2 42.727 110 61 1 72 181 2 109 5.84e-21 92.0
Msa0789210 AT4G23510.2 33.929 168 93 5 4 158 1 163 2.62e-20 90.1
Msa0789210 AT4G23510.3 33.929 168 93 5 4 158 1 163 2.75e-20 90.1
Msa0789210 AT4G23510.1 33.929 168 93 5 4 158 1 163 3.11e-20 89.7
Msa0789210 AT1G72850.1 34.568 162 91 3 18 178 8 155 1.62e-19 87.0
Msa0789210 AT4G36140.2 36.306 157 76 3 26 181 258 391 3.52e-19 87.0
Msa0789210 AT5G44920.1 28.652 178 115 3 16 182 10 186 4.38e-18 81.3
Msa0789210 AT5G44910.1 30.556 144 99 1 14 157 8 150 4.99e-17 78.2
Msa0789210 AT2G17050.1 32.787 183 108 6 7 182 1115 1289 7.59e-17 80.1
Msa0789210 AT2G17050.2 32.787 183 108 6 7 182 1146 1320 8.36e-17 80.1
Msa0789210 AT1G57850.2 35.780 109 65 4 50 157 32 136 8.58e-17 75.1
Msa0789210 AT5G45240.2 44.144 111 55 4 74 182 46 151 1.18e-15 76.6
Msa0789210 AT5G45240.1 44.144 111 55 4 74 182 46 151 1.18e-15 76.6
Msa0789210 AT2G17050.3 35.443 158 87 6 7 157 1146 1295 1.72e-15 76.3
Msa0789210 AT5G44920.2 30.709 127 78 2 16 133 10 135 1.23e-14 71.6
Msa0789210 AT4G19925.1 27.568 185 126 4 18 194 13 197 1.88e-14 71.2
Msa0789210 AT1G52900.1 28.402 169 101 5 13 178 34 185 6.79e-14 68.6
Msa0789210 AT5G45050.2 30.055 183 94 4 26 207 14 163 2.22e-13 69.7
Msa0789210 AT5G45050.1 30.055 183 94 4 26 207 14 163 2.26e-13 69.7
Msa0789210 AT5G45050.3 30.055 183 94 4 26 207 14 163 2.33e-13 69.7
Msa0789210 AT4G09420.1 31.373 153 99 4 18 169 13 160 6.01e-12 65.1
Msa0789210 AT1G65850.3 36.170 94 48 3 95 183 1 87 9.84e-12 65.1
Msa0789210 AT2G14080.2 34.043 94 50 3 95 183 1 87 2.34e-11 63.9
Msa0789210 AT4G19910.1 27.711 166 115 4 19 181 9 172 6.66e-11 60.8

Find 54 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATACCTCGTGAGTATTT+TGG 0.135345 5_2:-76966349 None:intergenic
TGAAAATACTTGACTGTAAA+AGG 0.188063 5_2:+76966585 Msa0789210:CDS
AAATATCAAACGCACTTCTT+AGG 0.197866 5_2:+76966483 Msa0789210:CDS
ACTTGACTGTAAAAGGAATA+TGG 0.219120 5_2:+76966592 Msa0789210:CDS
ACGAGGTATTCCTTAGCTTT+AGG 0.221770 5_2:+76966360 Msa0789210:CDS
CTAAACATGAGCAACAATTT+AGG 0.237466 5_2:+76966696 Msa0789210:CDS
CGAGGTATTCCTTAGCTTTA+GGG 0.245221 5_2:+76966361 Msa0789210:CDS
GCTGGGATTGCTCTCTTAAT+AGG 0.320552 5_2:+76966780 Msa0789210:CDS
GTGGATTCAATACTCAACTA+TGG 0.371477 5_2:+76968197 Msa0789210:CDS
ATTTAGGAACAATATGAATA+AGG 0.375741 5_2:+76966712 Msa0789210:CDS
CGCACTTCTTAGGGCAATTG+AGG 0.381369 5_2:+76966493 Msa0789210:CDS
TGCTAATTCAAAGTGGTGTT+TGG 0.389882 5_2:+76966553 Msa0789210:CDS
AGCAATTCTTTCCACGAGTT+CGG 0.403763 5_2:-76968065 None:intergenic
CAAGAAACCAACCAGCATCT+TGG 0.405951 5_2:+76968229 Msa0789210:CDS
GCATGAGATTCATTGCTTGT+AGG 0.415763 5_2:-76968168 None:intergenic
CGTAATCAAACAGGAGGTTA+TGG 0.417756 5_2:+76966662 Msa0789210:CDS
GCTGAAGTTGCTAATTTAGC+TGG 0.423690 5_2:+76966758 Msa0789210:CDS
AAGAAACCAACCAGCATCTT+GGG 0.425021 5_2:+76968230 Msa0789210:CDS
CTTGACTGTAAAAGGAATAT+GGG 0.439946 5_2:+76966593 Msa0789210:CDS
GTTTGATTACGAACACTAGA+AGG 0.449347 5_2:-76966650 None:intergenic
AATATCAAACGCACTTCTTA+GGG 0.450712 5_2:+76966484 Msa0789210:CDS
TTCTAAGCTGCCCAAGATGC+TGG 0.450947 5_2:-76968240 None:intergenic
TCTAGTGTTCGTAATCAAAC+AGG 0.452377 5_2:+76966653 Msa0789210:CDS
AAGTTGCTAATTTAGCTGGC+TGG 0.459052 5_2:+76966762 Msa0789210:CDS
CACAAGATTGTAGTCTATGT+AGG 0.466220 5_2:-76966450 None:intergenic
GCTAAGGTGGAGGAGTGCTT+TGG 0.470145 5_2:+76966736 Msa0789210:CDS
ATGAATCTCATGCGTGGAAG+TGG 0.471230 5_2:+76968178 Msa0789210:CDS
TTGTTAAGCAAGCATGAAGA+TGG 0.478382 5_2:-76966412 None:intergenic
ATTCCTTAGCTTTAGGGGAG+AGG 0.500093 5_2:+76966367 Msa0789210:CDS
TCCAATTAAGATGCCTTACA+TGG 0.504449 5_2:+76966301 None:intergenic
AGTTGCTAATTTAGCTGGCT+GGG 0.509697 5_2:+76966763 Msa0789210:CDS
AAGCTGCCCAAGATGCTGGT+TGG 0.527754 5_2:-76968236 None:intergenic
ATCTTCATGCTTGCTTAACA+AGG 0.531575 5_2:+76966414 Msa0789210:CDS
ACAATATGAATAAGGTGCTA+AGG 0.531835 5_2:+76966720 Msa0789210:CDS
GATGATGATTGTGCCATGTA+AGG 0.540793 5_2:-76966314 None:intergenic
AAGAATTGCTAGGGATGTGT+TGG 0.551988 5_2:+76968078 Msa0789210:CDS
TAGACTACAATCTTGTGAGA+GGG 0.571049 5_2:+76966456 Msa0789210:CDS
AAATTGAATCATGTGTATGT+TGG 0.579734 5_2:+76968103 Msa0789210:CDS
TGAATAAGGTGCTAAGGTGG+AGG 0.580422 5_2:+76966726 Msa0789210:CDS
TGTCCTCTCCCCTAAAGCTA+AGG 0.582375 5_2:-76966370 None:intergenic
ATATGAATAAGGTGCTAAGG+TGG 0.589469 5_2:+76966723 Msa0789210:CDS
AAAACTATGCTAATTCAAAG+TGG 0.594469 5_2:+76966546 Msa0789210:CDS
AACTCGTGGAAAGAATTGCT+AGG 0.596444 5_2:+76968068 Msa0789210:CDS
TGAGGAGTCAAAGCTTTCTG+TGG 0.604224 5_2:+76966511 Msa0789210:CDS
GAGGTATTCCTTAGCTTTAG+GGG 0.604371 5_2:+76966362 Msa0789210:CDS
CAGCATGGAATCCGAACTCG+TGG 0.605322 5_2:+76968054 Msa0789210:intron
ACTCGTGGAAAGAATTGCTA+GGG 0.605812 5_2:+76968069 Msa0789210:CDS
ATAGACTACAATCTTGTGAG+AGG 0.624260 5_2:+76966455 Msa0789210:CDS
AGTGTTCGTAATCAAACAGG+AGG 0.632063 5_2:+76966656 Msa0789210:CDS
CAAGCAATGAATCTCATGCG+TGG 0.648748 5_2:+76968172 Msa0789210:CDS
AGACTACAATCTTGTGAGAG+GGG 0.649761 5_2:+76966457 Msa0789210:CDS
AATGAAAACTACACAGCACG+TGG 0.685108 5_2:-76968292 None:intergenic
CATTCCCCAAAATACTCACG+AGG 0.700111 5_2:+76966343 Msa0789210:CDS
GTATGTTGGTGACATAGATG+AGG 0.721773 5_2:+76968117 Msa0789210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTAATAGAAAGTT+TGG + chr5_2:76967538-76967557 Msa0789210:intron 10.0%
!! AATAATATTATTATAGAGAA+AGG + chr5_2:76967598-76967617 Msa0789210:intron 10.0%
!!! ACTTTTTAAATTTTAATATG+TGG + chr5_2:76967754-76967773 Msa0789210:intron 10.0%
!!! ATTAATTTTAATAGAAAGTT+TGG + chr5_2:76967538-76967557 Msa0789210:intron 10.0%
!! AATAATATTATTATAGAGAA+AGG + chr5_2:76967598-76967617 Msa0789210:intron 10.0%
!!! ACTTTTTAAATTTTAATATG+TGG + chr5_2:76967754-76967773 Msa0789210:intron 10.0%
!! ACATCATGTTAAAATTAAAT+TGG - chr5_2:76966890-76966909 None:intergenic 15.0%
!!! AATTGTTTTGTTTTCTATTT+TGG - chr5_2:76967359-76967378 None:intergenic 15.0%
!!! GGTTTTTATTTTAATAATCA+CGG + chr5_2:76967619-76967638 Msa0789210:intron 15.0%
!!! TTTTACACAAATAAAATGTT+TGG - chr5_2:76968034-76968053 None:intergenic 15.0%
!! ACATCATGTTAAAATTAAAT+TGG - chr5_2:76966890-76966909 None:intergenic 15.0%
!!! AATTGTTTTGTTTTCTATTT+TGG - chr5_2:76967359-76967378 None:intergenic 15.0%
!!! GGTTTTTATTTTAATAATCA+CGG + chr5_2:76967619-76967638 Msa0789210:intron 15.0%
!!! TTTTACACAAATAAAATGTT+TGG - chr5_2:76968034-76968053 None:intergenic 15.0%
!! ATTTAGGAACAATATGAATA+AGG + chr5_2:76966712-76966731 Msa0789210:CDS 20.0%
!! TTCGTTGTAATCAAAATTTA+AGG - chr5_2:76967508-76967527 None:intergenic 20.0%
!! TAAAAATAAAGACCATTTCA+AGG - chr5_2:76967694-76967713 None:intergenic 20.0%
!! AATAGAAATAGAAATAGCAA+GGG - chr5_2:76967802-76967821 None:intergenic 20.0%
!! AAATAGAAATAGAAATAGCA+AGG - chr5_2:76967803-76967822 None:intergenic 20.0%
!!! ACACTATAAGTTTTATGATA+AGG - chr5_2:76967997-76968016 None:intergenic 20.0%
!! ATTTAGGAACAATATGAATA+AGG + chr5_2:76966712-76966731 Msa0789210:CDS 20.0%
!! TTCGTTGTAATCAAAATTTA+AGG - chr5_2:76967508-76967527 None:intergenic 20.0%
!! TAAAAATAAAGACCATTTCA+AGG - chr5_2:76967694-76967713 None:intergenic 20.0%
!! AATAGAAATAGAAATAGCAA+GGG - chr5_2:76967802-76967821 None:intergenic 20.0%
!! AAATAGAAATAGAAATAGCA+AGG - chr5_2:76967803-76967822 None:intergenic 20.0%
!!! ACACTATAAGTTTTATGATA+AGG - chr5_2:76967997-76968016 None:intergenic 20.0%
! AAAACTATGCTAATTCAAAG+TGG + chr5_2:76966546-76966565 Msa0789210:CDS 25.0%
! TGAAAATACTTGACTGTAAA+AGG + chr5_2:76966585-76966604 Msa0789210:CDS 25.0%
!! TATCAAAGCAAAAGTTTTCA+TGG - chr5_2:76966820-76966839 None:intergenic 25.0%
!!! TAGTAGTTATGTTAGTTTTG+AGG + chr5_2:76967165-76967184 Msa0789210:intron 25.0%
! GTTCATACTACTAAAACTAT+TGG - chr5_2:76967236-76967255 None:intergenic 25.0%
! CTTTCTCTATAATATTCAAG+TGG - chr5_2:76967574-76967593 None:intergenic 25.0%
! CACTTGAATATTATAGAGAA+AGG + chr5_2:76967572-76967591 Msa0789210:intron 25.0%
! CGAAATATTATACCTTGAAA+TGG + chr5_2:76967679-76967698 Msa0789210:intron 25.0%
! TTTATTTGTGTAAAACAGCA+TGG + chr5_2:76968039-76968058 Msa0789210:intron 25.0%
! AAATTGAATCATGTGTATGT+TGG + chr5_2:76968103-76968122 Msa0789210:CDS 25.0%
! AAAACTATGCTAATTCAAAG+TGG + chr5_2:76966546-76966565 Msa0789210:CDS 25.0%
! TGAAAATACTTGACTGTAAA+AGG + chr5_2:76966585-76966604 Msa0789210:CDS 25.0%
!! TATCAAAGCAAAAGTTTTCA+TGG - chr5_2:76966820-76966839 None:intergenic 25.0%
!!! TAGTAGTTATGTTAGTTTTG+AGG + chr5_2:76967165-76967184 Msa0789210:intron 25.0%
! GTTCATACTACTAAAACTAT+TGG - chr5_2:76967236-76967255 None:intergenic 25.0%
! CTTTCTCTATAATATTCAAG+TGG - chr5_2:76967574-76967593 None:intergenic 25.0%
! CACTTGAATATTATAGAGAA+AGG + chr5_2:76967572-76967591 Msa0789210:intron 25.0%
! CGAAATATTATACCTTGAAA+TGG + chr5_2:76967679-76967698 Msa0789210:intron 25.0%
! TTTATTTGTGTAAAACAGCA+TGG + chr5_2:76968039-76968058 Msa0789210:intron 25.0%
! AAATTGAATCATGTGTATGT+TGG + chr5_2:76968103-76968122 Msa0789210:CDS 25.0%
AAATATCAAACGCACTTCTT+AGG + chr5_2:76966483-76966502 Msa0789210:CDS 30.0%
AATATCAAACGCACTTCTTA+GGG + chr5_2:76966484-76966503 Msa0789210:CDS 30.0%
ACTTGACTGTAAAAGGAATA+TGG + chr5_2:76966592-76966611 Msa0789210:CDS 30.0%
CTTGACTGTAAAAGGAATAT+GGG + chr5_2:76966593-76966612 Msa0789210:CDS 30.0%
GGATCTATACCATAAAAAAC+AGG - chr5_2:76966632-76966651 None:intergenic 30.0%
CTAAACATGAGCAACAATTT+AGG + chr5_2:76966696-76966715 Msa0789210:CDS 30.0%
! ACAATATGAATAAGGTGCTA+AGG + chr5_2:76966720-76966739 Msa0789210:CDS 30.0%
TCTATAATATTCAAGTGGTG+GGG - chr5_2:76967569-76967588 None:intergenic 30.0%
CTCTATAATATTCAAGTGGT+GGG - chr5_2:76967570-76967589 None:intergenic 30.0%
TCTCTATAATATTCAAGTGG+TGG - chr5_2:76967571-76967590 None:intergenic 30.0%
CGGTGATTTGAATTTCTTTA+TGG + chr5_2:76967639-76967658 Msa0789210:intron 30.0%
AAATATCAAACGCACTTCTT+AGG + chr5_2:76966483-76966502 Msa0789210:CDS 30.0%
AATATCAAACGCACTTCTTA+GGG + chr5_2:76966484-76966503 Msa0789210:CDS 30.0%
ACTTGACTGTAAAAGGAATA+TGG + chr5_2:76966592-76966611 Msa0789210:CDS 30.0%
CTTGACTGTAAAAGGAATAT+GGG + chr5_2:76966593-76966612 Msa0789210:CDS 30.0%
GGATCTATACCATAAAAAAC+AGG - chr5_2:76966632-76966651 None:intergenic 30.0%
CTAAACATGAGCAACAATTT+AGG + chr5_2:76966696-76966715 Msa0789210:CDS 30.0%
! ACAATATGAATAAGGTGCTA+AGG + chr5_2:76966720-76966739 Msa0789210:CDS 30.0%
TCTATAATATTCAAGTGGTG+GGG - chr5_2:76967569-76967588 None:intergenic 30.0%
CTCTATAATATTCAAGTGGT+GGG - chr5_2:76967570-76967589 None:intergenic 30.0%
TCTCTATAATATTCAAGTGG+TGG - chr5_2:76967571-76967590 None:intergenic 30.0%
CGGTGATTTGAATTTCTTTA+TGG + chr5_2:76967639-76967658 Msa0789210:intron 30.0%
! AATACCTCGTGAGTATTTTG+GGG - chr5_2:76966350-76966369 None:intergenic 35.0%
! GAATACCTCGTGAGTATTTT+GGG - chr5_2:76966351-76966370 None:intergenic 35.0%
TTGTTAAGCAAGCATGAAGA+TGG - chr5_2:76966415-76966434 None:intergenic 35.0%
ATCTTCATGCTTGCTTAACA+AGG + chr5_2:76966414-76966433 Msa0789210:CDS 35.0%
CACAAGATTGTAGTCTATGT+AGG - chr5_2:76966453-76966472 None:intergenic 35.0%
ATAGACTACAATCTTGTGAG+AGG + chr5_2:76966455-76966474 Msa0789210:CDS 35.0%
TAGACTACAATCTTGTGAGA+GGG + chr5_2:76966456-76966475 Msa0789210:CDS 35.0%
TGCTAATTCAAAGTGGTGTT+TGG + chr5_2:76966553-76966572 Msa0789210:CDS 35.0%
!!! GTTGTAGTGCCTGTTTTTTA+TGG + chr5_2:76966620-76966639 Msa0789210:CDS 35.0%
GTTTGATTACGAACACTAGA+AGG - chr5_2:76966653-76966672 None:intergenic 35.0%
TCTAGTGTTCGTAATCAAAC+AGG + chr5_2:76966653-76966672 Msa0789210:CDS 35.0%
! ATATGAATAAGGTGCTAAGG+TGG + chr5_2:76966723-76966742 Msa0789210:CDS 35.0%
TACATGACTACTCAGAATGA+CGG + chr5_2:76967088-76967107 Msa0789210:intron 35.0%
!! TTGGTATTGATTTGTTGCGT+AGG - chr5_2:76967217-76967236 None:intergenic 35.0%
!! GTTTTAGTAGTATGAACGAG+TGG + chr5_2:76967239-76967258 Msa0789210:intron 35.0%
! CCTTTGTTGACTATTAGCTT+GGG + chr5_2:76967420-76967439 Msa0789210:intron 35.0%
GTGGATTCAATACTCAACTA+TGG + chr5_2:76968197-76968216 Msa0789210:CDS 35.0%
! AATACCTCGTGAGTATTTTG+GGG - chr5_2:76966350-76966369 None:intergenic 35.0%
! GAATACCTCGTGAGTATTTT+GGG - chr5_2:76966351-76966370 None:intergenic 35.0%
TTGTTAAGCAAGCATGAAGA+TGG - chr5_2:76966415-76966434 None:intergenic 35.0%
ATCTTCATGCTTGCTTAACA+AGG + chr5_2:76966414-76966433 Msa0789210:CDS 35.0%
CACAAGATTGTAGTCTATGT+AGG - chr5_2:76966453-76966472 None:intergenic 35.0%
ATAGACTACAATCTTGTGAG+AGG + chr5_2:76966455-76966474 Msa0789210:CDS 35.0%
TAGACTACAATCTTGTGAGA+GGG + chr5_2:76966456-76966475 Msa0789210:CDS 35.0%
TGCTAATTCAAAGTGGTGTT+TGG + chr5_2:76966553-76966572 Msa0789210:CDS 35.0%
!!! GTTGTAGTGCCTGTTTTTTA+TGG + chr5_2:76966620-76966639 Msa0789210:CDS 35.0%
GTTTGATTACGAACACTAGA+AGG - chr5_2:76966653-76966672 None:intergenic 35.0%
TCTAGTGTTCGTAATCAAAC+AGG + chr5_2:76966653-76966672 Msa0789210:CDS 35.0%
! ATATGAATAAGGTGCTAAGG+TGG + chr5_2:76966723-76966742 Msa0789210:CDS 35.0%
TACATGACTACTCAGAATGA+CGG + chr5_2:76967088-76967107 Msa0789210:intron 35.0%
!! TTGGTATTGATTTGTTGCGT+AGG - chr5_2:76967217-76967236 None:intergenic 35.0%
!! GTTTTAGTAGTATGAACGAG+TGG + chr5_2:76967239-76967258 Msa0789210:intron 35.0%
! CCTTTGTTGACTATTAGCTT+GGG + chr5_2:76967420-76967439 Msa0789210:intron 35.0%
GTGGATTCAATACTCAACTA+TGG + chr5_2:76968197-76968216 Msa0789210:CDS 35.0%
GATGATGATTGTGCCATGTA+AGG - chr5_2:76966317-76966336 None:intergenic 40.0%
!! AGTATTTTGGGGAATGTTGG+AGG - chr5_2:76966339-76966358 None:intergenic 40.0%
!! GTGAGTATTTTGGGGAATGT+TGG - chr5_2:76966342-76966361 None:intergenic 40.0%
! GGAATACCTCGTGAGTATTT+TGG - chr5_2:76966352-76966371 None:intergenic 40.0%
! ACGAGGTATTCCTTAGCTTT+AGG + chr5_2:76966360-76966379 Msa0789210:CDS 40.0%
!! CGAGGTATTCCTTAGCTTTA+GGG + chr5_2:76966361-76966380 Msa0789210:CDS 40.0%
!! GAGGTATTCCTTAGCTTTAG+GGG + chr5_2:76966362-76966381 Msa0789210:CDS 40.0%
AGACTACAATCTTGTGAGAG+GGG + chr5_2:76966457-76966476 Msa0789210:CDS 40.0%
AGTGTTCGTAATCAAACAGG+AGG + chr5_2:76966656-76966675 Msa0789210:CDS 40.0%
CGTAATCAAACAGGAGGTTA+TGG + chr5_2:76966662-76966681 Msa0789210:CDS 40.0%
GCTGAAGTTGCTAATTTAGC+TGG + chr5_2:76966758-76966777 Msa0789210:CDS 40.0%
AAGTTGCTAATTTAGCTGGC+TGG + chr5_2:76966762-76966781 Msa0789210:CDS 40.0%
AGTTGCTAATTTAGCTGGCT+GGG + chr5_2:76966763-76966782 Msa0789210:CDS 40.0%
! GCCTTTGTTGACTATTAGCT+TGG + chr5_2:76967419-76967438 Msa0789210:intron 40.0%
CCCAAGCTAATAGTCAACAA+AGG - chr5_2:76967423-76967442 None:intergenic 40.0%
AGCAATTCTTTCCACGAGTT+CGG - chr5_2:76968068-76968087 None:intergenic 40.0%
AACTCGTGGAAAGAATTGCT+AGG + chr5_2:76968068-76968087 Msa0789210:CDS 40.0%
ACTCGTGGAAAGAATTGCTA+GGG + chr5_2:76968069-76968088 Msa0789210:CDS 40.0%
AAGAATTGCTAGGGATGTGT+TGG + chr5_2:76968078-76968097 Msa0789210:CDS 40.0%
!! GTATGTTGGTGACATAGATG+AGG + chr5_2:76968117-76968136 Msa0789210:CDS 40.0%
GCATGAGATTCATTGCTTGT+AGG - chr5_2:76968171-76968190 None:intergenic 40.0%
AAGAAACCAACCAGCATCTT+GGG + chr5_2:76968230-76968249 Msa0789210:CDS 40.0%
GATGATGATTGTGCCATGTA+AGG - chr5_2:76966317-76966336 None:intergenic 40.0%
!! AGTATTTTGGGGAATGTTGG+AGG - chr5_2:76966339-76966358 None:intergenic 40.0%
!! GTGAGTATTTTGGGGAATGT+TGG - chr5_2:76966342-76966361 None:intergenic 40.0%
! GGAATACCTCGTGAGTATTT+TGG - chr5_2:76966352-76966371 None:intergenic 40.0%
! ACGAGGTATTCCTTAGCTTT+AGG + chr5_2:76966360-76966379 Msa0789210:CDS 40.0%
!! CGAGGTATTCCTTAGCTTTA+GGG + chr5_2:76966361-76966380 Msa0789210:CDS 40.0%
!! GAGGTATTCCTTAGCTTTAG+GGG + chr5_2:76966362-76966381 Msa0789210:CDS 40.0%
AGACTACAATCTTGTGAGAG+GGG + chr5_2:76966457-76966476 Msa0789210:CDS 40.0%
AGTGTTCGTAATCAAACAGG+AGG + chr5_2:76966656-76966675 Msa0789210:CDS 40.0%
CGTAATCAAACAGGAGGTTA+TGG + chr5_2:76966662-76966681 Msa0789210:CDS 40.0%
GCTGAAGTTGCTAATTTAGC+TGG + chr5_2:76966758-76966777 Msa0789210:CDS 40.0%
AAGTTGCTAATTTAGCTGGC+TGG + chr5_2:76966762-76966781 Msa0789210:CDS 40.0%
AGTTGCTAATTTAGCTGGCT+GGG + chr5_2:76966763-76966782 Msa0789210:CDS 40.0%
! GCCTTTGTTGACTATTAGCT+TGG + chr5_2:76967419-76967438 Msa0789210:intron 40.0%
CCCAAGCTAATAGTCAACAA+AGG - chr5_2:76967423-76967442 None:intergenic 40.0%
AGCAATTCTTTCCACGAGTT+CGG - chr5_2:76968068-76968087 None:intergenic 40.0%
AACTCGTGGAAAGAATTGCT+AGG + chr5_2:76968068-76968087 Msa0789210:CDS 40.0%
ACTCGTGGAAAGAATTGCTA+GGG + chr5_2:76968069-76968088 Msa0789210:CDS 40.0%
AAGAATTGCTAGGGATGTGT+TGG + chr5_2:76968078-76968097 Msa0789210:CDS 40.0%
!! GTATGTTGGTGACATAGATG+AGG + chr5_2:76968117-76968136 Msa0789210:CDS 40.0%
GCATGAGATTCATTGCTTGT+AGG - chr5_2:76968171-76968190 None:intergenic 40.0%
AAGAAACCAACCAGCATCTT+GGG + chr5_2:76968230-76968249 Msa0789210:CDS 40.0%
CATTCCCCAAAATACTCACG+AGG + chr5_2:76966343-76966362 Msa0789210:CDS 45.0%
!! ATTCCTTAGCTTTAGGGGAG+AGG + chr5_2:76966367-76966386 Msa0789210:CDS 45.0%
TGAGGAGTCAAAGCTTTCTG+TGG + chr5_2:76966511-76966530 Msa0789210:CDS 45.0%
! TGAATAAGGTGCTAAGGTGG+AGG + chr5_2:76966726-76966745 Msa0789210:CDS 45.0%
GCTGGGATTGCTCTCTTAAT+AGG + chr5_2:76966780-76966799 Msa0789210:CDS 45.0%
GAGTGGAACCAAGTCCAATA+GGG + chr5_2:76967256-76967275 Msa0789210:intron 45.0%
GTATTCGACCCTATTGGACT+TGG - chr5_2:76967267-76967286 None:intergenic 45.0%
CGCTAAGTATTCGACCCTAT+TGG - chr5_2:76967273-76967292 None:intergenic 45.0%
CAAGCAATGAATCTCATGCG+TGG + chr5_2:76968172-76968191 Msa0789210:CDS 45.0%
ATGAATCTCATGCGTGGAAG+TGG + chr5_2:76968178-76968197 Msa0789210:CDS 45.0%
CAAGAAACCAACCAGCATCT+TGG + chr5_2:76968229-76968248 Msa0789210:CDS 45.0%
CATTCCCCAAAATACTCACG+AGG + chr5_2:76966343-76966362 Msa0789210:CDS 45.0%
!! ATTCCTTAGCTTTAGGGGAG+AGG + chr5_2:76966367-76966386 Msa0789210:CDS 45.0%
TGAGGAGTCAAAGCTTTCTG+TGG + chr5_2:76966511-76966530 Msa0789210:CDS 45.0%
! TGAATAAGGTGCTAAGGTGG+AGG + chr5_2:76966726-76966745 Msa0789210:CDS 45.0%
GCTGGGATTGCTCTCTTAAT+AGG + chr5_2:76966780-76966799 Msa0789210:CDS 45.0%
GAGTGGAACCAAGTCCAATA+GGG + chr5_2:76967256-76967275 Msa0789210:intron 45.0%
GTATTCGACCCTATTGGACT+TGG - chr5_2:76967267-76967286 None:intergenic 45.0%
CGCTAAGTATTCGACCCTAT+TGG - chr5_2:76967273-76967292 None:intergenic 45.0%
CAAGCAATGAATCTCATGCG+TGG + chr5_2:76968172-76968191 Msa0789210:CDS 45.0%
ATGAATCTCATGCGTGGAAG+TGG + chr5_2:76968178-76968197 Msa0789210:CDS 45.0%
CAAGAAACCAACCAGCATCT+TGG + chr5_2:76968229-76968248 Msa0789210:CDS 45.0%
!!! TATTAAAATTTAAAAAGTAT+AGG - chr5_2:76967752-76967771 None:intergenic 5.0%
!!! TATTAAAATTTAAAAAGTAT+AGG - chr5_2:76967752-76967771 None:intergenic 5.0%
TGTCCTCTCCCCTAAAGCTA+AGG - chr5_2:76966373-76966392 None:intergenic 50.0%
CGCACTTCTTAGGGCAATTG+AGG + chr5_2:76966493-76966512 Msa0789210:CDS 50.0%
CGAGTGGAACCAAGTCCAAT+AGG + chr5_2:76967255-76967274 Msa0789210:intron 50.0%
GAAATAGCAAGGGACACGTG+AGG - chr5_2:76967792-76967811 None:intergenic 50.0%
TTCTAAGCTGCCCAAGATGC+TGG - chr5_2:76968243-76968262 None:intergenic 50.0%
TGTCCTCTCCCCTAAAGCTA+AGG - chr5_2:76966373-76966392 None:intergenic 50.0%
CGCACTTCTTAGGGCAATTG+AGG + chr5_2:76966493-76966512 Msa0789210:CDS 50.0%
CGAGTGGAACCAAGTCCAAT+AGG + chr5_2:76967255-76967274 Msa0789210:intron 50.0%
GAAATAGCAAGGGACACGTG+AGG - chr5_2:76967792-76967811 None:intergenic 50.0%
TTCTAAGCTGCCCAAGATGC+TGG - chr5_2:76968243-76968262 None:intergenic 50.0%
!! GCTAAGGTGGAGGAGTGCTT+TGG + chr5_2:76966736-76966755 Msa0789210:CDS 55.0%
AGGCAGTTCAGACGAGGTTC+TGG - chr5_2:76967197-76967216 None:intergenic 55.0%
TTGCGTAGGCAGTTCAGACG+AGG - chr5_2:76967203-76967222 None:intergenic 55.0%
CAGCATGGAATCCGAACTCG+TGG + chr5_2:76968054-76968073 Msa0789210:intron 55.0%
AAGCTGCCCAAGATGCTGGT+TGG - chr5_2:76968239-76968258 None:intergenic 55.0%
!! GCTAAGGTGGAGGAGTGCTT+TGG + chr5_2:76966736-76966755 Msa0789210:CDS 55.0%
AGGCAGTTCAGACGAGGTTC+TGG - chr5_2:76967197-76967216 None:intergenic 55.0%
TTGCGTAGGCAGTTCAGACG+AGG - chr5_2:76967203-76967222 None:intergenic 55.0%
CAGCATGGAATCCGAACTCG+TGG + chr5_2:76968054-76968073 Msa0789210:intron 55.0%
AAGCTGCCCAAGATGCTGGT+TGG - chr5_2:76968239-76968258 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 76966311 76968306 76966311 ID=Msa0789210;Name=Msa0789210
chr5_2 mRNA 76966311 76968306 76966311 ID=Msa0789210-mRNA-1;Parent=Msa0789210;Name=Msa0789210-mRNA-1;_AED=0.72;_eAED=0.72;_QI=0|0|0|0.5|1|1|2|0|246
chr5_2 exon 76966311 76966801 76966311 ID=Msa0789210-mRNA-1:exon:23430;Parent=Msa0789210-mRNA-1
chr5_2 exon 76968057 76968306 76968057 ID=Msa0789210-mRNA-1:exon:23431;Parent=Msa0789210-mRNA-1
chr5_2 CDS 76966311 76966801 76966311 ID=Msa0789210-mRNA-1:cds;Parent=Msa0789210-mRNA-1
chr5_2 CDS 76968057 76968306 76968057 ID=Msa0789210-mRNA-1:cds;Parent=Msa0789210-mRNA-1
Gene Sequence

>Msa0789210

ATGCCTTACATGGCACAATCATCATCCTCCAACATTCCCCAAAATACTCACGAGGTATTCCTTAGCTTTAGGGGAGAGGACACACGCTATAACTTCACAAGCCATCTTCATGCTTGCTTAACAAGGTTTCAAATCAAAACCTACATAGACTACAATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATTGAGGAGTCAAAGCTTTCTGTGGTTGTTTTGTCTGAAAACTATGCTAATTCAAAGTGGTGTTTGGATGAACTTGTGAAAATACTTGACTGTAAAAGGAATATGGGACAAGTTGTAGTGCCTGTTTTTTATGGTATAGATCCTTCTAGTGTTCGTAATCAAACAGGAGGTTATGGAATTGCTTTTGCTAAACATGAGCAACAATTTAGGAACAATATGAATAAGGTGCTAAGGTGGAGGAGTGCTTTGGCTGAAGTTGCTAATTTAGCTGGCTGGGATTGCTCTCTTAATAGCATGGAATCCGAACTCGTGGAAAGAATTGCTAGGGATGTGTTGGAGAAATTGAATCATGTGTATGTTGGTGACATAGATGAGGAAATCAATAAATATGAGCAACTATCAAACCTACAAGCAATGAATCTCATGCGTGGAAGTGGATTCAATACTCAACTATGGAATGATCTTCAAGAAACCAACCAGCATCTTGGGCAGCTTAGAATGAAGAAAAACGTTATTCTACTTAGATTGCCACGTGCTGTGTAG
Protein sequence

>Msa0789210

MPYMAQSSSSNIPQNTHEVFLSFRGEDTRYNFTSHLHACLTRFQIKTYIDYNLVRGDEISNALLRAIEESKLSVVVLSENYANSKWCLDELVKILDCKRNMGQVVVPVFYGIDPSSVRNQTGGYGIAFAKHEQQFRNNMNKVLRWRSALAEVANLAGWDCSLNSMESELVERIARDVLEKLNHVYVGDIDEEINKYEQLSNLQAMNLMRGSGFNTQLWNDLQETNQHLGQLRMKKNVILLRLPRAV*