AlfalfaGEDB | Msa0731260

M. sativa cultivar zhongmu-4 / Msa0731260

KEGG: K08790|K20069
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0010975 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0022008 GO:0023052 GO:0030154 GO:0030554 GO:0031344 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045664 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050773 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051716 GO:0051960 GO:0060284 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0120035 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:2000026
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0731260	XP_039690476.1	89.418	189	12	1	1	189	151	331	4.41e-115	347

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0731260	sp\|Q7TSE6\|ST38L_MOUSE	50.785	191	75	4	1	189	126	299	4.35e-56	186

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0731260	G7I4M5	89.418	189	12	1	1	189	151	331	2.11e-115	347

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0091590	Msa0731260	0.974715	1.202571e-138	-8.615850e-47
Msa0731260	Msa0751240	0.860102	2.609382e-63	-8.615850e-47
Msa0731260	Msa0771270	0.997836	3.130829e-250	-8.615850e-47
Msa0731260	Msa0811140	0.892954	9.855348e-75	-8.615850e-47
Msa0283630	Msa0731260	0.948084	1.899293e-106	-8.615850e-47
Msa0333590	Msa0731260	0.929287	8.629340e-93	-8.615850e-47
Msa0546530	Msa0731260	0.982198	1.766348e-154	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0731260	MtrunA17_Chr1g0167311	89.418	189	12	1	1	189	151	331	4.05e-119	347
Msa0731260	MtrunA17_Chr1g0167351	83.069	189	24	1	1	189	146	326	2.30e-110	325
Msa0731260	MtrunA17_Chr1g0187581	75.132	189	38	2	1	189	153	332	2.42e-100	300
Msa0731260	MtrunA17_Chr1g0183651	74.074	189	39	3	1	189	156	334	1.03e-96	291
Msa0731260	MtrunA17_Chr7g0261491	74.603	189	38	3	1	189	156	334	5.26e-96	290
Msa0731260	MtrunA17_Chr2g0299781	61.500	200	62	4	1	193	149	340	3.59e-77	239
Msa0731260	MtrunA17_Chr3g0135951	61.579	190	70	3	1	189	130	317	3.81e-76	237
Msa0731260	MtrunA17_Chr1g0153321	61.376	189	65	3	1	189	144	324	5.50e-74	231
Msa0731260	MtrunA17_Chr6g0478601	38.860	193	95	4	1	191	147	318	2.37e-33	124
Msa0731260	MtrunA17_Chr4g0018201	40.201	199	89	6	1	193	795	969	7.15e-33	124
Msa0731260	MtrunA17_Chr5g0428981	39.698	199	90	6	1	193	799	973	9.64e-33	124
Msa0731260	MtrunA17_Chr1g0197721	46.018	113	61	0	6	118	92	204	3.99e-28	109
Msa0731260	MtrunA17_Chr4g0059751	37.008	127	80	0	1	127	132	258	1.91e-26	104
Msa0731260	MtrunA17_Chr4g0030361	34.975	203	90	6	1	193	345	515	1.24e-24	100
Msa0731260	MtrunA17_Chr7g0245031	33.858	127	84	0	1	127	184	310	3.82e-23	95.9
Msa0731260	MtrunA17_Chr2g0309421	30.973	226	116	7	1	193	213	431	4.80e-23	95.9
Msa0731260	MtrunA17_Chr2g0327561	41.176	119	63	2	1	112	664	782	9.29e-23	95.1
Msa0731260	MtrunA17_Chr8g0369091	40.336	119	64	2	1	112	635	753	1.13e-22	94.7
Msa0731260	MtrunA17_Chr8g0335351	29.778	225	120	6	1	193	408	626	2.86e-20	87.8
Msa0731260	MtrunA17_Chr1g0179101	27.700	213	130	3	4	192	511	723	3.31e-20	87.8
Msa0731260	MtrunA17_Chr7g0227331	35.606	132	78	3	3	129	272	401	3.58e-20	87.4
Msa0731260	MtrunA17_Chr7g0266031	28.241	216	125	5	4	192	533	745	5.73e-19	84.3
Msa0731260	MtrunA17_Chr2g0312641	27.749	191	129	3	1	189	132	315	6.79e-19	83.6
Msa0731260	MtrunA17_Chr7g0250631	37.615	109	66	1	3	109	404	512	7.58e-19	84.0
Msa0731260	MtrunA17_Chr2g0290691	35.135	111	70	1	1	109	242	352	1.17e-18	83.2
Msa0731260	MtrunA17_Chr1g0188991	37.864	103	62	1	10	110	58	160	6.97e-18	80.9
Msa0731260	MtrunA17_Chr8g0356291	26.697	221	132	5	1	193	165	383	9.32e-18	80.5
Msa0731260	MtrunA17_Chr3g0080101	26.977	215	131	4	1	189	453	667	1.24e-17	80.1
Msa0731260	MtrunA17_Chr4g0063311	28.319	226	119	6	4	193	137	355	6.50e-17	78.2
Msa0731260	MtrunA17_Chr4g0013131	28.042	189	87	3	1	189	48	187	8.21e-17	77.8
Msa0731260	MtrunA17_Chr2g0321101	32.432	111	73	1	1	109	130	240	1.30e-16	77.0
Msa0731260	MtrunA17_Chr4g0074111	28.042	189	87	4	1	189	54	193	2.43e-16	76.3
Msa0731260	MtrunA17_Chr3g0125381	31.792	173	66	5	25	195	12	134	3.39e-16	73.6
Msa0731260	MtrunA17_Chr2g0284031	36.697	109	68	1	1	109	67	174	4.85e-16	75.5
Msa0731260	MtrunA17_Chr2g0304111	26.455	189	91	3	1	189	59	199	6.57e-16	75.1
Msa0731260	MtrunA17_Chr8g0379091	35.780	109	69	1	1	109	62	169	8.73e-16	74.7
Msa0731260	MtrunA17_Chr8g0351491	42.353	85	49	0	25	109	76	160	9.97e-16	73.6
Msa0731260	MtrunA17_Chr4g0063881	34.862	109	71	0	1	109	47	155	2.08e-15	73.6
Msa0731260	MtrunA17_Chr2g0286501	32.727	110	74	0	4	113	82	191	2.55e-15	73.6
Msa0731260	MtrunA17_Chr2g0285711	27.957	186	114	4	13	184	137	316	2.57e-15	73.2
Msa0731260	MtrunA17_Chr3g0140631	31.746	126	83	2	2	126	73	196	2.99e-15	72.4
Msa0731260	MtrunA17_Chr6g0453681	29.661	118	83	0	8	125	62	179	3.36e-15	73.2
Msa0731260	MtrunA17_Chr6g0468751	29.661	118	83	0	8	125	62	179	3.63e-15	72.8
Msa0731260	MtrunA17_Chr8g0338741	25.871	201	129	5	5	189	70	266	4.88e-15	72.4
Msa0731260	MtrunA17_Chr5g0432491	25.668	187	91	3	3	189	61	199	8.04e-15	72.0
Msa0731260	MtrunA17_Chr7g0234641	24.747	198	136	3	5	189	60	257	1.03e-14	71.6
Msa0731260	MtrunA17_Chr2g0330211	31.624	117	78	1	3	117	55	171	1.07e-14	71.6
Msa0731260	MtrunA17_Chr1g0188031	37.647	85	53	0	25	109	82	166	1.09e-14	71.6
Msa0731260	MtrunA17_Chr2g0284011	28.042	189	87	4	1	189	48	187	1.60e-14	70.9
Msa0731260	MtrunA17_Chr7g0244521	28.108	185	84	3	5	189	52	187	1.83e-14	70.9
Msa0731260	MtrunA17_Chr3g0107011	33.945	109	71	1	1	109	50	157	1.91e-14	70.9
Msa0731260	MtrunA17_Chr8g0353621	38.824	85	52	0	25	109	70	154	2.62e-14	69.3
Msa0731260	MtrunA17_Chr8g0386981	34.862	109	71	0	3	111	448	556	3.20e-14	70.5
Msa0731260	MtrunA17_Chr8g0381091	28.426	197	121	6	13	193	133	325	3.42e-14	70.1
Msa0731260	MtrunA17_Chr4g0032761	23.618	199	128	5	11	185	68	266	4.38e-14	69.7
Msa0731260	MtrunA17_Chr7g0272841	30.275	109	76	0	3	111	111	219	5.48e-14	69.7
Msa0731260	MtrunA17_Chr3g0132671	29.310	116	82	0	10	125	94	209	8.47e-14	68.9
Msa0731260	MtrunA17_Chr1g0205421	25.926	189	91	4	1	189	48	187	1.20e-13	68.6
Msa0731260	MtrunA17_Chr2g0317001	33.645	107	71	0	7	113	55	161	1.47e-13	68.6
Msa0731260	MtrunA17_Chr8g0346081	30.275	109	76	0	1	109	53	161	1.53e-13	68.2
Msa0731260	MtrunA17_Chr8g0346071	30.000	110	77	0	1	110	53	162	1.58e-13	68.2
Msa0731260	MtrunA17_Chr6g0453671	28.571	119	85	0	8	126	62	180	2.31e-13	67.4
Msa0731260	MtrunA17_Chr5g0419441	33.913	115	73	2	2	113	272	386	2.38e-13	67.8
Msa0731260	MtrunA17_Chr5g0441011	26.455	189	91	3	1	189	49	189	2.43e-13	67.8
Msa0731260	MtrunA17_Chr7g0274941	37.647	85	51	2	25	108	77	160	2.43e-13	67.0
Msa0731260	MtrunA17_Chr5g0428031	32.203	118	74	1	10	127	54	165	3.41e-13	67.0
Msa0731260	MtrunA17_Chr3g0107051	25.405	185	89	3	5	189	61	196	4.44e-13	67.0
Msa0731260	MtrunA17_Chr3g0130151	32.174	115	78	0	3	117	284	398	5.12e-13	66.6
Msa0731260	MtrunA17_Chr5g0432471	26.087	184	87	3	6	189	53	187	5.49e-13	66.6
Msa0731260	MtrunA17_Chr4g0008561	30.579	121	81	1	8	125	61	181	5.63e-13	66.6
Msa0731260	MtrunA17_Chr3g0114511	34.862	109	68	2	1	109	68	173	6.54e-13	66.2
Msa0731260	MtrunA17_Chr6g0450571	30.392	102	69	1	10	109	59	160	9.13e-13	66.2
Msa0731260	MtrunA17_Chr4g0000431	32.353	102	67	1	10	109	67	168	9.42e-13	66.2
Msa0731260	MtrunA17_Chr1g0202831	34.314	102	67	0	10	111	458	559	1.27e-12	65.9
Msa0731260	MtrunA17_Chr3g0129721	31.034	116	77	1	13	125	72	187	1.44e-12	64.7
Msa0731260	MtrunA17_Chr8g0345801	27.586	116	81	1	13	125	62	177	1.45e-12	64.3
Msa0731260	MtrunA17_Chr5g0424651	28.448	116	82	1	4	119	361	475	2.38e-12	64.7
Msa0731260	MtrunA17_Chr4g0001331	34.951	103	66	1	7	109	62	163	3.03e-12	64.3
Msa0731260	MtrunA17_Chr5g0405421	31.818	110	69	3	7	110	141	250	4.11e-12	64.3
Msa0731260	MtrunA17_Chr5g0424501	29.204	113	79	1	7	119	235	346	1.06e-11	62.8
Msa0731260	MtrunA17_Chr5g0424581	29.091	110	77	1	10	119	171	279	1.21e-11	62.8
Msa0731260	MtrunA17_Chr1g0166101	36.471	85	54	0	25	109	85	169	1.30e-11	62.4
Msa0731260	MtrunA17_Chr5g0443471	30.000	120	81	1	6	122	203	322	1.35e-11	62.4
Msa0731260	MtrunA17_Chr2g0326531	35.000	80	52	0	38	117	200	279	1.47e-11	62.4
Msa0731260	MtrunA17_Chr1g0150321	27.568	185	85	4	5	189	53	188	1.96e-11	62.0
Msa0731260	MtrunA17_Chr2g0284901	27.907	129	79	3	6	123	191	316	2.27e-11	62.0
Msa0731260	MtrunA17_Chr8g0384301	32.110	109	74	0	3	111	339	447	2.42e-11	62.0
Msa0731260	MtrunA17_Chr1g0205931	28.302	106	76	0	3	108	98	203	3.56e-11	61.6
Msa0731260	MtrunA17_Chr3g0091291	32.323	99	66	1	11	109	6	103	3.99e-11	59.7
Msa0731260	MtrunA17_Chr4g0051191	31.373	102	69	1	10	111	210	310	4.28e-11	61.2
Msa0731260	MtrunA17_Chr5g0423891	38.053	113	64	3	4	111	199	310	4.60e-11	60.8
Msa0731260	MtrunA17_Chr2g0333821	32.000	100	67	1	10	109	59	157	5.03e-11	60.8
Msa0731260	MtrunA17_Chr3g0091311	28.906	128	88	2	1	126	48	174	5.78e-11	60.1
Msa0731260	MtrunA17_Chr5g0396361	34.783	115	68	4	2	110	173	286	5.81e-11	60.8
Msa0731260	MtrunA17_Chr4g0072831	38.889	72	44	0	38	109	62	133	6.61e-11	60.1
Msa0731260	MtrunA17_Chr1g0206261	35.398	113	67	3	4	111	126	237	6.73e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0731260	AT4G14350.3	75.132	189	38	2	1	189	155	334	1.35e-98	296
Msa0731260	AT4G14350.2	75.132	189	38	2	1	189	155	334	1.42e-98	296
Msa0731260	AT4G14350.1	75.132	189	38	2	1	189	155	334	1.42e-98	296
Msa0731260	AT4G14350.4	75.132	189	38	2	1	189	155	334	1.42e-98	296
Msa0731260	AT3G23310.1	74.346	191	38	3	1	189	156	337	1.78e-96	291
Msa0731260	AT2G20470.3	68.783	189	48	2	1	189	160	337	1.47e-90	275
Msa0731260	AT2G20470.2	68.783	189	48	2	1	189	160	337	5.74e-90	274
Msa0731260	AT2G20470.1	68.783	189	48	2	1	189	160	337	5.74e-90	274
Msa0731260	AT1G03920.2	70.370	189	46	3	1	189	60	238	4.49e-88	266
Msa0731260	AT1G03920.1	70.370	189	46	3	1	189	173	351	2.66e-87	267
Msa0731260	AT1G03920.3	70.370	189	46	3	1	189	173	351	2.66e-87	267
Msa0731260	AT4G33080.2	61.340	194	64	3	1	189	130	317	6.56e-76	236
Msa0731260	AT4G33080.1	61.340	194	64	3	1	189	130	317	7.06e-76	236
Msa0731260	AT2G19400.1	61.616	198	65	3	1	193	141	332	1.44e-75	236
Msa0731260	AT1G30640.3	59.896	192	66	3	1	189	63	246	2.94e-74	231
Msa0731260	AT1G30640.2	59.896	192	66	3	1	189	156	339	8.36e-74	232
Msa0731260	AT1G30640.1	59.896	192	66	3	1	189	156	339	8.36e-74	232
Msa0731260	AT5G09890.1	62.500	192	60	4	1	189	138	320	1.22e-73	231
Msa0731260	AT5G09890.2	62.500	192	60	4	1	189	138	320	1.23e-73	231
Msa0731260	AT5G62310.1	42.328	189	90	6	1	189	790	959	1.82e-34	129
Msa0731260	AT3G17850.1	38.144	194	97	4	1	192	918	1090	2.91e-32	122
Msa0731260	AT1G48490.3	37.500	192	95	3	1	192	864	1030	6.15e-32	122
Msa0731260	AT1G48490.2	37.500	192	95	3	1	192	864	1030	6.15e-32	122
Msa0731260	AT1G48490.1	37.500	192	95	3	1	192	864	1030	6.15e-32	122
Msa0731260	AT1G48490.4	37.500	192	95	3	1	192	865	1031	6.51e-32	122
Msa0731260	AT1G45160.1	38.462	195	95	5	1	193	706	877	3.35e-31	119
Msa0731260	AT1G45160.2	38.462	195	95	5	1	193	706	877	3.42e-31	119
Msa0731260	AT5G04510.3	45.133	113	62	0	6	118	85	197	1.68e-28	108
Msa0731260	AT5G04510.2	45.133	113	62	0	6	118	85	197	2.69e-28	109
Msa0731260	AT5G04510.1	45.133	113	62	0	6	118	85	197	3.96e-28	110
Msa0731260	AT3G10540.1	45.133	113	62	0	6	118	86	198	1.92e-27	108
Msa0731260	AT3G08730.1	37.719	114	71	0	1	114	170	283	7.21e-24	98.2
Msa0731260	AT3G08730.2	37.719	114	71	0	1	114	170	283	7.21e-24	98.2
Msa0731260	AT3G08720.1	37.719	114	71	0	1	114	176	289	1.18e-23	97.4
Msa0731260	AT3G08720.3	37.719	114	71	0	1	114	176	289	1.18e-23	97.4
Msa0731260	AT3G08720.4	37.719	114	71	0	1	114	176	289	1.18e-23	97.4
Msa0731260	AT3G08720.2	37.719	114	71	0	1	114	176	289	1.18e-23	97.4
Msa0731260	AT3G45780.2	40.336	119	64	2	1	112	699	817	4.80e-22	93.6
Msa0731260	AT3G45780.1	40.336	119	64	2	1	112	699	817	4.80e-22	93.6
Msa0731260	AT1G79250.1	28.507	221	130	4	1	193	182	402	1.01e-21	92.4
Msa0731260	AT1G79250.3	28.507	221	130	4	1	193	182	402	1.01e-21	92.4
Msa0731260	AT1G79250.2	28.507	221	130	4	1	193	182	402	1.01e-21	92.4
Msa0731260	AT1G79250.4	28.507	221	130	4	1	193	182	402	1.01e-21	92.4
Msa0731260	AT5G55910.2	30.973	226	121	7	1	193	145	368	2.03e-21	91.3
Msa0731260	AT5G55910.1	30.973	226	121	7	1	193	145	368	2.03e-21	91.3
Msa0731260	AT5G58140.3	30.928	194	109	3	1	192	613	783	1.36e-20	89.4
Msa0731260	AT5G58140.6	30.928	194	109	3	1	192	613	783	1.40e-20	89.4
Msa0731260	AT5G58140.7	30.928	194	109	3	1	192	613	783	1.40e-20	89.4
Msa0731260	AT5G58140.5	30.928	194	109	3	1	192	613	783	1.40e-20	89.4
Msa0731260	AT5G58140.2	30.928	194	109	3	1	192	613	783	1.40e-20	89.4
Msa0731260	AT5G58140.1	30.928	194	109	3	1	192	613	783	1.40e-20	89.4
Msa0731260	AT1G16440.1	28.571	217	122	6	1	193	151	358	3.64e-20	87.8
Msa0731260	AT5G47750.1	36.937	111	68	1	1	109	227	337	4.37e-20	87.8
Msa0731260	AT4G26610.1	38.739	111	66	1	1	109	159	269	6.73e-20	87.0
Msa0731260	AT3G52890.2	30.357	224	119	7	4	192	577	798	7.20e-20	87.0
Msa0731260	AT3G52890.4	30.357	224	119	7	4	192	577	798	7.20e-20	87.0
Msa0731260	AT3G52890.1	30.357	224	119	7	4	192	577	798	7.20e-20	87.0
Msa0731260	AT3G52890.3	30.357	224	119	7	4	192	577	798	7.20e-20	87.0
Msa0731260	AT2G36350.1	28.571	224	121	7	4	192	598	817	1.22e-19	86.7
Msa0731260	AT2G44830.2	37.963	108	65	1	4	109	402	509	2.22e-19	85.9
Msa0731260	AT2G44830.3	37.963	108	65	1	4	109	402	509	2.22e-19	85.9
Msa0731260	AT2G44830.1	37.963	108	65	1	4	109	402	509	2.22e-19	85.9
Msa0731260	AT3G27580.2	29.148	223	126	6	1	193	218	438	3.88e-19	85.1
Msa0731260	AT3G27580.1	29.148	223	126	6	1	193	218	438	3.88e-19	85.1
Msa0731260	AT3G44610.1	26.009	223	133	5	1	193	115	335	1.42e-18	83.2
Msa0731260	AT4G24400.2	35.780	109	70	0	1	109	45	153	1.89e-18	82.4
Msa0731260	AT4G24400.1	35.780	109	70	0	1	109	45	153	2.16e-18	82.4
Msa0731260	AT2G26700.1	37.374	99	60	1	13	109	137	235	2.80e-18	82.4
Msa0731260	AT3G20830.1	32.086	187	111	7	20	193	79	262	2.82e-18	82.0
Msa0731260	AT2G34650.1	29.944	177	117	3	13	184	128	302	3.86e-18	81.6
Msa0731260	AT3G12690.1	26.818	220	125	7	1	193	221	431	5.02e-18	81.6
Msa0731260	AT3G12690.3	26.818	220	125	7	1	193	221	431	5.02e-18	81.6
Msa0731260	AT3G12690.2	26.818	220	125	7	1	193	221	431	5.02e-18	81.6
Msa0731260	AT2G45490.2	39.216	102	60	1	25	126	82	181	3.47e-17	77.4
Msa0731260	AT2G45490.1	39.216	102	60	1	25	126	82	181	4.93e-17	77.4
Msa0731260	AT4G13000.1	26.768	198	123	5	3	189	59	245	9.71e-17	77.4
Msa0731260	AT5G03640.2	27.679	224	121	6	4	192	580	797	2.28e-16	77.0
Msa0731260	AT5G03640.1	27.679	224	121	6	4	192	580	797	2.28e-16	77.0
Msa0731260	AT5G18700.1	35.294	102	66	0	13	114	46	147	5.84e-16	75.9
Msa0731260	AT5G40030.1	25.806	217	133	7	1	192	150	363	6.41e-16	75.5
Msa0731260	AT5G35410.2	33.333	126	83	1	1	125	47	172	7.21e-16	75.1
Msa0731260	AT5G35410.1	33.333	126	83	1	1	125	47	172	8.45e-16	75.1
Msa0731260	AT5G45810.1	35.780	109	69	1	1	109	64	171	9.52e-16	75.1
Msa0731260	AT4G18700.1	35.780	109	69	1	1	109	62	169	1.00e-15	75.1
Msa0731260	AT1G53700.1	22.680	194	143	2	1	192	130	318	1.06e-15	74.7
Msa0731260	AT3G14370.1	25.946	185	132	2	10	192	133	314	1.11e-15	74.7
Msa0731260	AT5G25110.1	28.649	185	83	3	5	189	83	218	1.43e-15	74.7
Msa0731260	AT1G51170.1	29.902	204	124	7	2	193	65	261	2.50e-15	73.6
Msa0731260	AT1G54960.1	31.193	109	75	0	3	111	111	219	2.60e-15	73.9
Msa0731260	AT1G54960.2	31.193	109	75	0	3	111	111	219	2.60e-15	73.9
Msa0731260	AT1G30270.1	25.926	189	92	3	1	189	67	207	5.48e-15	72.8
Msa0731260	AT1G30270.2	25.926	189	92	3	1	189	67	207	6.81e-15	72.4
Msa0731260	AT5G10930.1	28.042	189	87	3	1	189	49	188	6.85e-15	72.4
Msa0731260	AT3G01090.3	30.508	118	82	0	8	125	62	179	8.65e-15	72.4
Msa0731260	AT3G01090.1	30.508	118	82	0	8	125	62	179	8.65e-15	72.4
Msa0731260	AT3G01090.2	30.508	118	82	0	8	125	85	202	9.12e-15	72.4
Msa0731260	AT1G49180.2	31.496	127	84	1	2	125	43	169	9.31e-15	72.0
Msa0731260	AT1G29230.1	33.945	109	71	1	1	109	110	217	9.48e-15	72.0
Msa0731260	AT4G14580.1	29.091	165	69	2	25	189	82	198	1.09e-14	72.0
Msa0731260	AT1G49180.1	31.496	127	84	1	2	125	43	169	1.14e-14	71.6
Msa0731260	AT2G26980.2	32.110	109	74	0	1	109	50	158	1.39e-14	70.5
Msa0731260	AT2G26980.3	26.984	189	90	3	1	189	50	190	1.47e-14	71.6
Msa0731260	AT2G25090.1	26.344	186	96	2	4	189	55	199	1.49e-14	71.6
Msa0731260	AT2G26980.4	26.984	189	90	3	1	189	60	200	1.52e-14	71.6
Msa0731260	AT2G26980.1	26.984	189	90	3	1	189	50	190	1.73e-14	71.2
Msa0731260	AT2G26980.5	26.984	189	90	3	1	189	50	190	2.24e-14	70.9
Msa0731260	AT5G58380.1	27.568	185	85	2	5	189	52	187	2.94e-14	70.9
Msa0731260	AT1G09000.2	30.275	109	76	0	3	111	112	220	3.08e-14	70.9
Msa0731260	AT1G09000.1	30.275	109	76	0	3	111	112	220	3.10e-14	70.9
Msa0731260	AT5G45820.1	28.649	185	83	3	5	189	52	187	4.58e-14	70.1
Msa0731260	AT1G30270.3	29.605	152	59	3	38	189	7	110	5.12e-14	69.7
Msa0731260	AT5G01810.1	28.042	189	87	3	1	189	48	187	8.54e-14	69.3
Msa0731260	AT5G01810.2	28.042	189	87	3	1	189	48	187	8.54e-14	69.3
Msa0731260	AT5G01810.3	28.042	189	87	3	1	189	48	187	9.16e-14	68.9
Msa0731260	AT2G30360.1	33.000	100	67	0	10	109	67	166	1.02e-13	68.9
Msa0731260	AT3G29160.3	27.966	118	85	0	8	125	63	180	1.05e-13	68.9
Msa0731260	AT4G30960.1	27.869	183	83	3	7	189	66	199	1.34e-13	68.9
Msa0731260	AT4G10730.2	31.373	102	68	1	10	109	70	171	1.36e-13	68.9
Msa0731260	AT4G10730.1	31.373	102	68	1	10	109	90	191	1.38e-13	68.9
Msa0731260	AT3G29160.1	27.966	118	85	0	8	125	63	180	1.39e-13	68.9
Msa0731260	AT3G29160.2	27.966	118	85	0	8	125	63	180	1.39e-13	68.9
Msa0731260	AT4G24100.1	31.373	102	68	1	10	109	76	177	1.50e-13	68.9
Msa0731260	AT4G24100.4	31.373	102	68	1	10	109	92	193	1.57e-13	68.9
Msa0731260	AT1G01140.1	25.263	190	91	2	7	193	61	202	1.57e-13	68.6
Msa0731260	AT4G24100.2	31.373	102	68	1	10	109	76	177	1.61e-13	68.6
Msa0731260	AT1G01140.3	25.263	190	91	2	7	193	61	202	1.61e-13	68.6
Msa0731260	AT1G01140.2	25.263	190	91	2	7	193	61	202	1.65e-13	68.6
Msa0731260	AT4G24100.3	31.373	102	68	1	10	109	92	193	1.68e-13	68.6
Msa0731260	AT2G25880.1	30.952	126	84	2	2	126	61	184	1.77e-13	67.8
Msa0731260	AT1G63700.1	32.110	109	74	0	3	111	440	548	2.14e-13	68.6
Msa0731260	AT1G63700.2	32.110	109	74	0	3	111	440	548	2.14e-13	68.6
Msa0731260	AT4G32830.1	30.952	126	84	2	2	126	67	190	2.20e-13	67.4
Msa0731260	AT2G25880.4	33.028	109	72	1	2	109	74	182	2.31e-13	67.4
Msa0731260	AT2G25880.3	33.028	109	72	1	2	109	122	230	3.17e-13	67.4
Msa0731260	AT3G61960.1	27.586	116	81	1	13	125	57	172	3.53e-13	67.8
Msa0731260	AT5G14720.1	31.373	102	68	1	10	109	59	160	4.23e-13	67.4
Msa0731260	AT5G14720.2	31.373	102	68	1	10	109	59	160	4.23e-13	67.4
Msa0731260	AT3G61960.2	27.586	116	81	1	13	125	57	172	4.24e-13	67.4
Msa0731260	AT3G23000.1	29.091	165	68	3	25	189	86	201	4.61e-13	67.0
Msa0731260	AT1G53570.4	33.945	109	72	0	3	111	254	362	5.98e-13	67.0
Msa0731260	AT1G53570.2	33.945	109	72	0	3	111	254	362	5.98e-13	67.0
Msa0731260	AT1G53570.3	33.945	109	72	0	3	111	254	362	5.98e-13	67.0
Msa0731260	AT1G53570.1	33.945	109	72	0	3	111	254	362	5.98e-13	67.0
Msa0731260	AT1G70430.4	31.481	108	72	1	4	109	53	160	6.61e-13	67.0
Msa0731260	AT1G70430.1	31.481	108	72	1	4	109	53	160	6.66e-13	67.0
Msa0731260	AT1G70430.3	31.481	108	72	1	4	109	53	160	6.71e-13	67.0
Msa0731260	AT5G21326.1	30.275	109	76	0	1	109	49	157	7.60e-13	66.6
Msa0731260	AT3G06030.1	29.358	109	77	0	3	111	111	219	7.94e-13	66.6
Msa0731260	AT2G37840.1	28.926	121	83	1	8	125	54	174	9.13e-13	66.6
Msa0731260	AT5G21222.1	29.358	109	77	0	1	109	49	157	1.17e-12	66.2
Msa0731260	AT5G21222.2	29.358	109	77	0	1	109	49	157	1.17e-12	66.2
Msa0731260	AT5G21222.4	29.358	109	77	0	1	109	49	157	1.17e-12	66.2
Msa0731260	AT5G21222.3	29.358	109	77	0	1	109	49	157	1.17e-12	66.2
Msa0731260	AT1G53570.7	36.364	99	63	0	13	111	264	362	1.19e-12	66.2
Msa0731260	AT1G53570.6	36.364	99	63	0	13	111	264	362	1.23e-12	65.9
Msa0731260	AT1G69220.2	32.710	107	71	1	8	113	263	369	1.39e-12	65.9
Msa0731260	AT1G69220.1	32.710	107	71	1	8	113	290	396	1.56e-12	65.9
Msa0731260	AT3G25250.1	27.660	188	124	4	10	189	69	252	1.69e-12	65.5
Msa0731260	AT4G14480.1	30.275	109	74	1	3	109	52	160	1.85e-12	65.5
Msa0731260	AT1G79640.6	34.314	102	65	1	10	109	56	157	2.49e-12	65.1
Msa0731260	AT1G79640.5	34.314	102	65	1	10	109	59	160	2.58e-12	65.1
Msa0731260	AT1G79640.1	34.314	102	65	1	10	109	56	157	2.64e-12	65.1
Msa0731260	AT1G79640.2	34.314	102	65	1	10	109	56	157	2.66e-12	65.1
Msa0731260	AT1G79640.4	34.314	102	65	1	10	109	56	157	2.66e-12	65.1
Msa0731260	AT1G79640.3	34.314	102	65	1	10	109	56	157	2.66e-12	65.1
Msa0731260	AT5G39440.1	28.713	101	72	0	25	125	79	179	5.21e-12	64.3
Msa0731260	AT2G34180.1	33.945	109	71	1	1	109	93	200	5.98e-12	63.9
Msa0731260	AT3G15220.1	33.981	103	68	0	11	113	59	161	1.09e-11	63.5
Msa0731260	AT4G08500.1	31.429	105	71	1	7	111	376	479	1.12e-11	63.2
Msa0731260	AT1G53165.1	33.981	103	68	0	11	113	59	161	6.15e-11	61.2
Msa0731260	AT1G53165.3	33.981	103	68	0	11	113	59	161	6.16e-11	61.2
Msa0731260	AT1G53165.2	33.981	103	68	0	11	113	59	161	6.58e-11	61.2
Msa0731260	AT1G66750.1	34.286	105	69	0	13	117	60	164	7.54e-11	60.5

Find 41 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACGTGAAATTATCAGATTT+TGG	0.253070	5_1:-41811278	Msa0731260:CDS
CCAGTTGCTGTTGTTGTGAT+TGG	0.300638	5_1:+41811126	None:intergenic
ATGTTTATGAATAGACTCTA+TGG	0.331837	5_1:+41811588	None:intergenic
CATGCCCGACAACTTGCTTC+TGG	0.340707	5_1:-41811312	Msa0731260:CDS
GATGAAGCTAAATTCTATAT+CGG	0.354953	5_1:-41811625	Msa0731260:CDS
ATAAACATAATTATATTCAT+AGG	0.369736	5_1:-41811573	Msa0731260:intron
AAAAGACTGCAGTAACCTTC+AGG	0.370471	5_1:-41811219	Msa0731260:CDS
ATTGCGAAAGAGTTAAATAA+TGG	0.386315	5_1:-41811964	Msa0731260:five_prime_UTR
GCTAGACTGCAGTAACCTTC+AGG	0.390289	5_1:-41811243	Msa0731260:CDS
ATGAAGCTAAATTCTATATC+GGG	0.407900	5_1:-41811624	Msa0731260:CDS
CCTCTCTTCAGAATAACTTC+TGG	0.412241	5_1:+41810643	None:intergenic
AAGCAAGTTCATCACTTTGA+AGG	0.415965	5_1:+41811159	None:intergenic
CCAATCACAACAACAGCAAC+TGG	0.416983	5_1:-41811126	Msa0731260:CDS
CGAGTATTTATATCTCATAA+TGG	0.455404	5_1:-41811707	Msa0731260:CDS
GAGTGTTCCAACCGTAGAAT+AGG	0.473047	5_1:+41810678	None:intergenic
TGCTATCAACTTCTGCAAGA+AGG	0.478344	5_1:+41811767	None:intergenic
TGCTGTTGTTGTGATTGGTT+AGG	0.484482	5_1:+41811131	None:intergenic
TCTAATGGAGTTAACATAAG+TGG	0.486303	5_1:-41811185	Msa0731260:CDS
AACAGCAACTGGAGCATTCG+CGG	0.503673	5_1:-41811115	Msa0731260:CDS
CTATCCAGAAGCAAGTTGTC+GGG	0.515263	5_1:+41811308	None:intergenic
TAAATACTCGTCATCTTGAA+AGG	0.518616	5_1:+41811720	None:intergenic
CAACGTCATCATATCTCCAC+CGG	0.521802	5_1:+41811675	None:intergenic
GATATTGCAGACCTATTCTA+CGG	0.522525	5_1:-41810689	Msa0731260:intron
TCTATCCAGAAGCAAGTTGT+CGG	0.524432	5_1:+41811307	None:intergenic
AGCATCTCTGATTTAACTCA+CGG	0.528343	5_1:+41811906	None:intergenic
TTGCAGACCTATTCTACGGT+TGG	0.534089	5_1:-41810685	Msa0731260:intron
CTCATAATGGAGTATCTACC+CGG	0.543468	5_1:-41811694	Msa0731260:CDS
AACTTGCTTCTGGATAGAAA+TGG	0.545939	5_1:-41811302	Msa0731260:CDS
AGAGATGCTTAGTAGAGGAC+AGG	0.546069	5_1:-41811892	Msa0731260:intron
CCAGAAGTTATTCTGAAGAG+AGG	0.595321	5_1:-41810643	Msa0731260:CDS
CAGAAGTTATTCTGAAGAGA+GGG	0.602815	5_1:-41810642	Msa0731260:intron
TCTTTCGCAATGTGAAACTC+CGG	0.605862	5_1:+41811976	None:intergenic
TTCGCAATGTGAAACTCCGG+AGG	0.606544	5_1:+41811979	None:intergenic
TTGAATATATCAAATCTGAA+AGG	0.615218	5_1:-41811792	Msa0731260:CDS
ATATGATGACGTTGCTGATG+CGG	0.617376	5_1:-41811666	Msa0731260:CDS
TGAAGGTTACTGCAGTCTAG+CGG	0.630065	5_1:+41811245	None:intergenic
AAATCAGAGATGCTTAGTAG+AGG	0.631650	5_1:-41811897	Msa0731260:exon
TGAAGCTAAATTCTATATCG+GGG	0.655322	5_1:-41811623	Msa0731260:CDS
AACGTCATCATATCTCCACC+GGG	0.657380	5_1:+41811676	None:intergenic
TCGCAATGTGAAACTCCGGA+GGG	0.678985	5_1:+41811980	None:intergenic
ATAATGGAGTATCTACCCGG+TGG	0.717919	5_1:-41811691	Msa0731260:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAACATAATTATATTCAT+AGG	-	chr5_1:41810974-41810993	Msa0731260:intron	10.0%
!!!	TTTTTATTATAACTGAAAAA+AGG	+	chr5_1:41811630-41811649	None:intergenic	10.0%
!!	ATAAACATAATTATATTCAT+AGG	-	chr5_1:41810974-41810993	Msa0731260:intron	10.0%
!!!	TTTTTATTATAACTGAAAAA+AGG	+	chr5_1:41811630-41811649	None:intergenic	10.0%
!!!	ATTATTTTCTTTTACTTATC+AGG	-	chr5_1:41810710-41810729	Msa0731260:intron	15.0%
!!	TAGCAAACTTTATTATAAAA+CGG	-	chr5_1:41811528-41811547	Msa0731260:intron	15.0%
!!	ATTTACATCATATATCAATT+TGG	-	chr5_1:41811729-41811748	Msa0731260:CDS	15.0%
!!	TTTACATCATATATCAATTT+GGG	-	chr5_1:41811730-41811749	Msa0731260:CDS	15.0%
!!!	ATTATTTTCTTTTACTTATC+AGG	-	chr5_1:41810710-41810729	Msa0731260:intron	15.0%
!!	TAGCAAACTTTATTATAAAA+CGG	-	chr5_1:41811528-41811547	Msa0731260:intron	15.0%
!!	ATTTACATCATATATCAATT+TGG	-	chr5_1:41811729-41811748	Msa0731260:CDS	15.0%
!!	TTTACATCATATATCAATTT+GGG	-	chr5_1:41811730-41811749	Msa0731260:CDS	15.0%
!!	TTGAATATATCAAATCTGAA+AGG	-	chr5_1:41810755-41810774	Msa0731260:intron	20.0%
!!	TATGATTACTTTATTCAAAG+CGG	-	chr5_1:41811598-41811617	Msa0731260:CDS	20.0%
!!	TTGAATATATCAAATCTGAA+AGG	-	chr5_1:41810755-41810774	Msa0731260:intron	20.0%
!!	TATGATTACTTTATTCAAAG+CGG	-	chr5_1:41811598-41811617	Msa0731260:CDS	20.0%
!	ATTGCGAAAGAGTTAAATAA+TGG	-	chr5_1:41810583-41810602	Msa0731260:intron	25.0%
!!!	GTGCTTTTATGTTTTTGATT+AGG	-	chr5_1:41810732-41810751	Msa0731260:intron	25.0%
!	CGAGTATTTATATCTCATAA+TGG	-	chr5_1:41810840-41810859	Msa0731260:intron	25.0%
!	GATGAAGCTAAATTCTATAT+CGG	-	chr5_1:41810922-41810941	Msa0731260:intron	25.0%
!	ATGAAGCTAAATTCTATATC+GGG	-	chr5_1:41810923-41810942	Msa0731260:intron	25.0%
!	ATGTTTATGAATAGACTCTA+TGG	+	chr5_1:41810962-41810981	None:intergenic	25.0%
!	GCTACAATCTTATACTAAAT+AGG	+	chr5_1:41811036-41811055	None:intergenic	25.0%
!	AGTGATTTCGTTGAAAATAA+CGG	+	chr5_1:41811078-41811097	None:intergenic	25.0%
!	AATTATCAGTGTTAGATTGT+AGG	-	chr5_1:41811108-41811127	Msa0731260:CDS	25.0%
!	ATTATCAGTGTTAGATTGTA+GGG	-	chr5_1:41811109-41811128	Msa0731260:CDS	25.0%
!!	TTATAACTGAAAAAAGGTGT+AGG	+	chr5_1:41811624-41811643	None:intergenic	25.0%
!	CATTATTCTTTCGTTATGTT+TGG	-	chr5_1:41811656-41811675	Msa0731260:CDS	25.0%
!!!	TCTTTCGTGATATTTTTGTT+TGG	-	chr5_1:41811687-41811706	Msa0731260:CDS	25.0%
!	AAAGAGAGAATAGTCTTTAA+AGG	+	chr5_1:41811775-41811794	None:intergenic	25.0%
!!!	TATTCTCTCTTTTGATTGTA+TGG	-	chr5_1:41811783-41811802	Msa0731260:CDS	25.0%
!	GTGATTGGTATAATAGTATA+TGG	-	chr5_1:41811941-41811960	Msa0731260:five_prime_UTR	25.0%
!	ATTGCGAAAGAGTTAAATAA+TGG	-	chr5_1:41810583-41810602	Msa0731260:intron	25.0%
!!!	GTGCTTTTATGTTTTTGATT+AGG	-	chr5_1:41810732-41810751	Msa0731260:intron	25.0%
!	CGAGTATTTATATCTCATAA+TGG	-	chr5_1:41810840-41810859	Msa0731260:intron	25.0%
!	GATGAAGCTAAATTCTATAT+CGG	-	chr5_1:41810922-41810941	Msa0731260:intron	25.0%
!	ATGAAGCTAAATTCTATATC+GGG	-	chr5_1:41810923-41810942	Msa0731260:intron	25.0%
!	ATGTTTATGAATAGACTCTA+TGG	+	chr5_1:41810962-41810981	None:intergenic	25.0%
!	GCTACAATCTTATACTAAAT+AGG	+	chr5_1:41811036-41811055	None:intergenic	25.0%
!	AGTGATTTCGTTGAAAATAA+CGG	+	chr5_1:41811078-41811097	None:intergenic	25.0%
!	AATTATCAGTGTTAGATTGT+AGG	-	chr5_1:41811108-41811127	Msa0731260:CDS	25.0%
!	ATTATCAGTGTTAGATTGTA+GGG	-	chr5_1:41811109-41811128	Msa0731260:CDS	25.0%
!!	TTATAACTGAAAAAAGGTGT+AGG	+	chr5_1:41811624-41811643	None:intergenic	25.0%
!	CATTATTCTTTCGTTATGTT+TGG	-	chr5_1:41811656-41811675	Msa0731260:CDS	25.0%
!!!	TCTTTCGTGATATTTTTGTT+TGG	-	chr5_1:41811687-41811706	Msa0731260:CDS	25.0%
!	AAAGAGAGAATAGTCTTTAA+AGG	+	chr5_1:41811775-41811794	None:intergenic	25.0%
!!!	TATTCTCTCTTTTGATTGTA+TGG	-	chr5_1:41811783-41811802	Msa0731260:CDS	25.0%
!	GTGATTGGTATAATAGTATA+TGG	-	chr5_1:41811941-41811960	Msa0731260:five_prime_UTR	25.0%
	TAAATACTCGTCATCTTGAA+AGG	+	chr5_1:41810830-41810849	None:intergenic	30.0%
	TGAAGCTAAATTCTATATCG+GGG	-	chr5_1:41810924-41810943	Msa0731260:intron	30.0%
!	CAACGAAATCACTATTGTTT+TGG	-	chr5_1:41811085-41811104	Msa0731260:intron	30.0%
!	CACGTGAAATTATCAGATTT+TGG	-	chr5_1:41811269-41811288	Msa0731260:CDS	30.0%
!	TAGATAAGTCTTTTTCCTGA+AGG	+	chr5_1:41811346-41811365	None:intergenic	30.0%
	CAGGAAAAAGACTTATCTAA+TGG	-	chr5_1:41811347-41811366	Msa0731260:intron	30.0%
	TCTAATGGAGTTAACATAAG+TGG	-	chr5_1:41811362-41811381	Msa0731260:intron	30.0%
	GAATAAGTGAATAACTTCTC+AGG	-	chr5_1:41811995-41812014	Msa0731260:five_prime_UTR	30.0%
	TAAATACTCGTCATCTTGAA+AGG	+	chr5_1:41810830-41810849	None:intergenic	30.0%
	TGAAGCTAAATTCTATATCG+GGG	-	chr5_1:41810924-41810943	Msa0731260:intron	30.0%
!	CAACGAAATCACTATTGTTT+TGG	-	chr5_1:41811085-41811104	Msa0731260:intron	30.0%
!	CACGTGAAATTATCAGATTT+TGG	-	chr5_1:41811269-41811288	Msa0731260:CDS	30.0%
!	TAGATAAGTCTTTTTCCTGA+AGG	+	chr5_1:41811346-41811365	None:intergenic	30.0%
	CAGGAAAAAGACTTATCTAA+TGG	-	chr5_1:41811347-41811366	Msa0731260:intron	30.0%
	TCTAATGGAGTTAACATAAG+TGG	-	chr5_1:41811362-41811381	Msa0731260:intron	30.0%
	GAATAAGTGAATAACTTCTC+AGG	-	chr5_1:41811995-41812014	Msa0731260:five_prime_UTR	30.0%
	AGCATCTCTGATTTAACTCA+CGG	+	chr5_1:41810644-41810663	None:intergenic	35.0%
	AAATCAGAGATGCTTAGTAG+AGG	-	chr5_1:41810650-41810669	Msa0731260:CDS	35.0%
	CATGAATACCTCTGAATGAT+CGG	+	chr5_1:41811165-41811184	None:intergenic	35.0%
!	AACTTGCTTCTGGATAGAAA+TGG	-	chr5_1:41811245-41811264	Msa0731260:CDS	35.0%
	AAGCAAGTTCATCACTTTGA+AGG	+	chr5_1:41811391-41811410	None:intergenic	35.0%
	CTTTCGTTATGTTTGGACTT+CGG	-	chr5_1:41811663-41811682	Msa0731260:CDS	35.0%
	GATATTGCAGACCTATTCTA+CGG	-	chr5_1:41811858-41811877	Msa0731260:intron	35.0%
!	CAGAAGTTATTCTGAAGAGA+GGG	-	chr5_1:41811905-41811924	Msa0731260:exon	35.0%
	AGCATCTCTGATTTAACTCA+CGG	+	chr5_1:41810644-41810663	None:intergenic	35.0%
	AAATCAGAGATGCTTAGTAG+AGG	-	chr5_1:41810650-41810669	Msa0731260:CDS	35.0%
	CATGAATACCTCTGAATGAT+CGG	+	chr5_1:41811165-41811184	None:intergenic	35.0%
!	AACTTGCTTCTGGATAGAAA+TGG	-	chr5_1:41811245-41811264	Msa0731260:CDS	35.0%
	AAGCAAGTTCATCACTTTGA+AGG	+	chr5_1:41811391-41811410	None:intergenic	35.0%
	CTTTCGTTATGTTTGGACTT+CGG	-	chr5_1:41811663-41811682	Msa0731260:CDS	35.0%
	GATATTGCAGACCTATTCTA+CGG	-	chr5_1:41811858-41811877	Msa0731260:intron	35.0%
!	CAGAAGTTATTCTGAAGAGA+GGG	-	chr5_1:41811905-41811924	Msa0731260:exon	35.0%
!	AGATGTCTTTCTTTTCCCTC+CGG	-	chr5_1:41810552-41810571	Msa0731260:intron	40.0%
	TCTTTCGCAATGTGAAACTC+CGG	+	chr5_1:41810574-41810593	None:intergenic	40.0%
	TGCTATCAACTTCTGCAAGA+AGG	+	chr5_1:41810783-41810802	None:intergenic	40.0%
!	CTCATAATGGAGTATCTACC+CGG	-	chr5_1:41810853-41810872	Msa0731260:intron	40.0%
!	ATATGATGACGTTGCTGATG+CGG	-	chr5_1:41810881-41810900	Msa0731260:intron	40.0%
	GGGTACTTAACTTTACGACA+TGG	-	chr5_1:41811129-41811148	Msa0731260:CDS	40.0%
	CTTGAATACCGATCATTCAG+AGG	-	chr5_1:41811154-41811173	Msa0731260:CDS	40.0%
	TCTATCCAGAAGCAAGTTGT+CGG	+	chr5_1:41811243-41811262	None:intergenic	40.0%
!	TACTGCAGTCTTTTTCCTGA+AGG	+	chr5_1:41811322-41811341	None:intergenic	40.0%
	AAAAGACTGCAGTAACCTTC+AGG	-	chr5_1:41811328-41811347	Msa0731260:intron	40.0%
!	TGCTGTTGTTGTGATTGGTT+AGG	+	chr5_1:41811419-41811438	None:intergenic	40.0%
	CCTCTCTTCAGAATAACTTC+TGG	+	chr5_1:41811907-41811926	None:intergenic	40.0%
!	CCAGAAGTTATTCTGAAGAG+AGG	-	chr5_1:41811904-41811923	Msa0731260:exon	40.0%
!	GTTATTCTGAAGAGAGGGTA+TGG	-	chr5_1:41811910-41811929	Msa0731260:exon	40.0%
!	AGTATATGGCGTTGAAAGCT+TGG	-	chr5_1:41811955-41811974	Msa0731260:five_prime_UTR	40.0%
!	AGATGTCTTTCTTTTCCCTC+CGG	-	chr5_1:41810552-41810571	Msa0731260:intron	40.0%
	TCTTTCGCAATGTGAAACTC+CGG	+	chr5_1:41810574-41810593	None:intergenic	40.0%
	TGCTATCAACTTCTGCAAGA+AGG	+	chr5_1:41810783-41810802	None:intergenic	40.0%
!	CTCATAATGGAGTATCTACC+CGG	-	chr5_1:41810853-41810872	Msa0731260:intron	40.0%
!	ATATGATGACGTTGCTGATG+CGG	-	chr5_1:41810881-41810900	Msa0731260:intron	40.0%
	GGGTACTTAACTTTACGACA+TGG	-	chr5_1:41811129-41811148	Msa0731260:CDS	40.0%
	CTTGAATACCGATCATTCAG+AGG	-	chr5_1:41811154-41811173	Msa0731260:CDS	40.0%
	TCTATCCAGAAGCAAGTTGT+CGG	+	chr5_1:41811243-41811262	None:intergenic	40.0%
!	TACTGCAGTCTTTTTCCTGA+AGG	+	chr5_1:41811322-41811341	None:intergenic	40.0%
	AAAAGACTGCAGTAACCTTC+AGG	-	chr5_1:41811328-41811347	Msa0731260:intron	40.0%
!	TGCTGTTGTTGTGATTGGTT+AGG	+	chr5_1:41811419-41811438	None:intergenic	40.0%
	CCTCTCTTCAGAATAACTTC+TGG	+	chr5_1:41811907-41811926	None:intergenic	40.0%
!	CCAGAAGTTATTCTGAAGAG+AGG	-	chr5_1:41811904-41811923	Msa0731260:exon	40.0%
!	GTTATTCTGAAGAGAGGGTA+TGG	-	chr5_1:41811910-41811929	Msa0731260:exon	40.0%
!	AGTATATGGCGTTGAAAGCT+TGG	-	chr5_1:41811955-41811974	Msa0731260:five_prime_UTR	40.0%
	AGAGATGCTTAGTAGAGGAC+AGG	-	chr5_1:41810655-41810674	Msa0731260:CDS	45.0%
	GCTTAGTAGAGGACAGGTAT+TGG	-	chr5_1:41810661-41810680	Msa0731260:CDS	45.0%
!	ATAATGGAGTATCTACCCGG+TGG	-	chr5_1:41810856-41810875	Msa0731260:intron	45.0%
	AACGTCATCATATCTCCACC+GGG	+	chr5_1:41810874-41810893	None:intergenic	45.0%
	CAACGTCATCATATCTCCAC+CGG	+	chr5_1:41810875-41810894	None:intergenic	45.0%
	CTATCCAGAAGCAAGTTGTC+GGG	+	chr5_1:41811242-41811261	None:intergenic	45.0%
	TGAAGGTTACTGCAGTCTAG+CGG	+	chr5_1:41811305-41811324	None:intergenic	45.0%
!	CCAGTTGCTGTTGTTGTGAT+TGG	+	chr5_1:41811424-41811443	None:intergenic	45.0%
	CCAATCACAACAACAGCAAC+TGG	-	chr5_1:41811421-41811440	Msa0731260:intron	45.0%
	GAAAAATCGCAGCAGAATGC+TGG	-	chr5_1:41811454-41811473	Msa0731260:intron	45.0%
	TTGCAGACCTATTCTACGGT+TGG	-	chr5_1:41811862-41811881	Msa0731260:intron	45.0%
	GAGTGTTCCAACCGTAGAAT+AGG	+	chr5_1:41811872-41811891	None:intergenic	45.0%
	AGAGATGCTTAGTAGAGGAC+AGG	-	chr5_1:41810655-41810674	Msa0731260:CDS	45.0%
	GCTTAGTAGAGGACAGGTAT+TGG	-	chr5_1:41810661-41810680	Msa0731260:CDS	45.0%
!	ATAATGGAGTATCTACCCGG+TGG	-	chr5_1:41810856-41810875	Msa0731260:intron	45.0%
	AACGTCATCATATCTCCACC+GGG	+	chr5_1:41810874-41810893	None:intergenic	45.0%
	CAACGTCATCATATCTCCAC+CGG	+	chr5_1:41810875-41810894	None:intergenic	45.0%
	CTATCCAGAAGCAAGTTGTC+GGG	+	chr5_1:41811242-41811261	None:intergenic	45.0%
	TGAAGGTTACTGCAGTCTAG+CGG	+	chr5_1:41811305-41811324	None:intergenic	45.0%
!	CCAGTTGCTGTTGTTGTGAT+TGG	+	chr5_1:41811424-41811443	None:intergenic	45.0%
	CCAATCACAACAACAGCAAC+TGG	-	chr5_1:41811421-41811440	Msa0731260:intron	45.0%
	GAAAAATCGCAGCAGAATGC+TGG	-	chr5_1:41811454-41811473	Msa0731260:intron	45.0%
	TTGCAGACCTATTCTACGGT+TGG	-	chr5_1:41811862-41811881	Msa0731260:intron	45.0%
	GAGTGTTCCAACCGTAGAAT+AGG	+	chr5_1:41811872-41811891	None:intergenic	45.0%
	TCGCAATGTGAAACTCCGGA+GGG	+	chr5_1:41810570-41810589	None:intergenic	50.0%
	TTCGCAATGTGAAACTCCGG+AGG	+	chr5_1:41810571-41810590	None:intergenic	50.0%
	GCTAGACTGCAGTAACCTTC+AGG	-	chr5_1:41811304-41811323	Msa0731260:CDS	50.0%
!	AACAGCAACTGGAGCATTCG+CGG	-	chr5_1:41811432-41811451	Msa0731260:intron	50.0%
	GGTATGGCGTGGAATGTGAT+TGG	-	chr5_1:41811926-41811945	Msa0731260:five_prime_UTR	50.0%
	TCGCAATGTGAAACTCCGGA+GGG	+	chr5_1:41810570-41810589	None:intergenic	50.0%
	TTCGCAATGTGAAACTCCGG+AGG	+	chr5_1:41810571-41810590	None:intergenic	50.0%
	GCTAGACTGCAGTAACCTTC+AGG	-	chr5_1:41811304-41811323	Msa0731260:CDS	50.0%
!	AACAGCAACTGGAGCATTCG+CGG	-	chr5_1:41811432-41811451	Msa0731260:intron	50.0%
	GGTATGGCGTGGAATGTGAT+TGG	-	chr5_1:41811926-41811945	Msa0731260:five_prime_UTR	50.0%
!	CATGCCCGACAACTTGCTTC+TGG	-	chr5_1:41811235-41811254	Msa0731260:CDS	55.0%
!	TCTGAAGAGAGGGTATGGCG+TGG	-	chr5_1:41811915-41811934	Msa0731260:five_prime_UTR	55.0%
!	CATGCCCGACAACTTGCTTC+TGG	-	chr5_1:41811235-41811254	Msa0731260:CDS	55.0%
!	TCTGAAGAGAGGGTATGGCG+TGG	-	chr5_1:41811915-41811934	Msa0731260:five_prime_UTR	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	41810531	41812038	41810531	ID=Msa0731260;Name=Msa0731260
chr5_1	mRNA	41810531	41812038	41810531	ID=Msa0731260-mRNA-1;Parent=Msa0731260;Name=Msa0731260-mRNA-1;_AED=0.35;_eAED=0.35;_QI=128\|0.25\|0.2\|0.4\|1\|1\|5\|0\|195
chr5_1	exon	41810531	41810552	41810531	ID=Msa0731260-mRNA-1:exon:12128;Parent=Msa0731260-mRNA-1
chr5_1	exon	41810643	41810701	41810643	ID=Msa0731260-mRNA-1:exon:12127;Parent=Msa0731260-mRNA-1
chr5_1	exon	41811094	41811340	41811094	ID=Msa0731260-mRNA-1:exon:12126;Parent=Msa0731260-mRNA-1
chr5_1	exon	41811574	41811815	41811574	ID=Msa0731260-mRNA-1:exon:12125;Parent=Msa0731260-mRNA-1
chr5_1	exon	41811893	41812038	41811893	ID=Msa0731260-mRNA-1:exon:12124;Parent=Msa0731260-mRNA-1
chr5_1	five_prime_UTR	41811911	41812038	41811911	ID=Msa0731260-mRNA-1:five_prime_utr;Parent=Msa0731260-mRNA-1
chr5_1	CDS	41811893	41811910	41811893	ID=Msa0731260-mRNA-1:cds;Parent=Msa0731260-mRNA-1
chr5_1	CDS	41811574	41811815	41811574	ID=Msa0731260-mRNA-1:cds;Parent=Msa0731260-mRNA-1
chr5_1	CDS	41811094	41811340	41811094	ID=Msa0731260-mRNA-1:cds;Parent=Msa0731260-mRNA-1
chr5_1	CDS	41810643	41810701	41810643	ID=Msa0731260-mRNA-1:cds;Parent=Msa0731260-mRNA-1
chr5_1	CDS	41810531	41810552	41810531	ID=Msa0731260-mRNA-1:cds;Parent=Msa0731260-mRNA-1

Gene Sequence

>Msa0731260

ATGCTTAGTAGAGGACAGGTTGAATATATCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAAAGAAGTACTGACTGAAGATGAAGCTAAATTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCATGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAACAGCAACTGGAGCATTCGCGGAAAAATCGCAGCAGAATGCTGACCTATTCTACGGTTGGAACACTCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTCTGCTGCTGATAATCTCTAA

Protein sequence

>Msa0731260

MLSRGQVEYIKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKEVLTEDEAKFYIGETVLAIESIHKHNYIHRDIMPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDCSNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHSRKNRSRMLTYSTVGTLDYIAPEVILKRGSAADNL*