AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0733360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733360 MtrunA17_Chr5g0428541 75.439 171 40 2 31 199 422 592 2.07e-82 256
Msa0733360 MtrunA17_Chr3g0128551 67.442 172 51 5 31 200 452 620 8.73e-68 218
Msa0733360 MtrunA17_Chr3g0108301 59.281 167 65 3 31 196 464 628 8.98e-58 192
Msa0733360 MtrunA17_Chr5g0432851 61.078 167 62 3 31 196 465 629 1.11e-57 192
Msa0733360 MtrunA17_Chr7g0245171 54.144 181 78 5 16 194 429 606 2.67e-52 177
Msa0733360 MtrunA17_Chr8g0393211 49.708 171 84 2 31 201 484 652 3.99e-50 172
Msa0733360 MtrunA17_Chr3g0126281 53.704 162 71 4 30 189 163 322 1.05e-49 164
Msa0733360 MtrunA17_Chr5g0396941 49.405 168 81 4 31 196 409 574 3.67e-47 163
Msa0733360 MtrunA17_Chr6g0478621 47.368 171 88 2 31 201 487 655 2.02e-46 162
Msa0733360 MtrunA17_Chr3g0126271 51.765 170 77 5 31 198 430 596 8.37e-46 159
Msa0733360 MtrunA17_Chr4g0062911 51.205 166 77 4 32 196 457 619 9.83e-46 160
Msa0733360 MtrunA17_Chr8g0387791 50.000 168 80 4 31 196 432 597 1.11e-45 159
Msa0733360 MtrunA17_Chr1g0159161 51.807 166 73 5 31 196 400 558 1.60e-44 155
Msa0733360 MtrunA17_Chr5g0434551 44.767 172 93 2 31 202 449 618 3.18e-44 155
Msa0733360 MtrunA17_Chr1g0209521 48.837 172 77 5 32 194 468 637 7.44e-42 149
Msa0733360 MtrunA17_Chr5g0423121 45.251 179 93 3 16 194 434 607 1.05e-39 143
Msa0733360 MtrunA17_Chr7g0265601 41.489 188 93 6 31 203 485 670 1.78e-38 140
Msa0733360 MtrunA17_Chr4g0037561 42.331 163 86 4 33 191 479 637 2.40e-30 117
Msa0733360 MtrunA17_Chr1g0179521 41.243 177 91 6 31 203 472 639 2.98e-30 117
Msa0733360 MtrunA17_Chr5g0437741 33.673 196 113 6 9 199 587 770 1.07e-26 107
Msa0733360 MtrunA17_Chr5g0445251 40.136 147 74 4 46 191 51 184 1.96e-26 101
Msa0733360 MtrunA17_Chr7g0237801 34.254 181 110 5 31 204 490 668 4.74e-26 105
Msa0733360 MtrunA17_Chr4g0005201 38.750 160 88 4 45 199 624 778 1.04e-24 101
Msa0733360 MtrunA17_Chr2g0288391 35.028 177 95 5 31 204 456 615 9.97e-22 92.4
Msa0733360 MtrunA17_Chr7g0237821 36.571 175 99 5 31 198 908 1077 1.17e-21 92.4
Msa0733360 MtrunA17_Chr4g0053221 38.554 166 83 5 31 194 471 619 3.24e-21 90.9
Msa0733360 MtrunA17_Chr2g0279071 34.177 158 101 3 46 202 258 413 3.93e-21 90.5
Msa0733360 MtrunA17_Chr3g0117921 34.091 176 92 7 18 188 469 625 4.41e-20 87.8
Msa0733360 MtrunA17_Chr5g0419721 35.484 186 105 6 30 208 755 932 8.35e-20 87.0
Msa0733360 MtrunA17_Chr7g0244931 36.628 172 97 6 31 196 778 943 3.29e-19 85.5
Msa0733360 MtrunA17_Chr6g0478181 31.217 189 117 6 18 196 362 547 9.63e-19 84.0
Msa0733360 MtrunA17_Chr8g0388991 36.601 153 93 3 46 196 468 618 2.52e-18 82.8
Msa0733360 MtrunA17_Chr8g0356041 28.125 192 119 7 17 194 164 350 3.03e-18 81.6
Msa0733360 MtrunA17_Chr7g0221191 31.737 167 105 4 31 189 501 666 9.59e-18 80.9
Msa0733360 MtrunA17_Chr3g0134221 34.118 170 90 6 31 196 499 650 1.80e-17 80.1
Msa0733360 MtrunA17_Chr2g0301061 28.313 166 115 3 31 193 30 194 1.85e-17 77.0
Msa0733360 MtrunA17_Chr4g0018701 31.429 175 112 6 31 200 832 1003 4.22e-17 79.3
Msa0733360 MtrunA17_Chr4g0012841 33.721 172 102 5 31 196 690 855 5.15e-17 79.0
Msa0733360 MtrunA17_Chr5g0413511 26.943 193 130 5 9 191 141 332 5.59e-17 78.2
Msa0733360 MtrunA17_Chr1g0147701 34.615 130 81 3 46 173 466 593 7.80e-17 78.2
Msa0733360 MtrunA17_Chr2g0312651 33.121 157 96 4 43 193 931 1084 9.69e-17 78.2
Msa0733360 MtrunA17_Chr3g0128731 35.882 170 99 5 31 194 809 974 9.89e-17 78.2
Msa0733360 MtrunA17_Chr6g0488771 35.849 159 87 6 46 196 258 409 1.16e-16 77.4
Msa0733360 MtrunA17_Chr8g0344471 33.735 166 105 4 32 194 507 670 1.22e-16 77.8
Msa0733360 MtrunA17_Chr7g0243401 30.688 189 104 6 31 194 535 721 1.41e-16 77.8
Msa0733360 MtrunA17_Chr4g0017251 31.250 176 112 6 31 201 785 956 1.53e-16 77.4
Msa0733360 MtrunA17_Chr1g0183231 30.857 175 112 6 31 200 814 984 1.61e-16 77.4
Msa0733360 MtrunA17_Chr2g0313911 31.977 172 107 5 31 196 180 347 1.65e-16 76.6
Msa0733360 MtrunA17_Chr5g0409041 30.488 164 104 5 32 189 412 571 2.49e-16 76.6
Msa0733360 MtrunA17_Chr5g0442151 31.148 183 109 8 29 199 787 964 3.85e-16 76.3
Msa0733360 MtrunA17_Chr1g0201241 32.022 178 110 7 30 197 829 1005 4.15e-16 76.3
Msa0733360 MtrunA17_Chr7g0222221 30.508 177 111 5 31 198 130 303 5.72e-16 74.7
Msa0733360 MtrunA17_Chr8g0376301 44.944 89 45 2 100 188 289 373 6.21e-16 75.5
Msa0733360 MtrunA17_Chr1g0209211 29.952 207 114 6 16 195 503 705 7.24e-16 75.5
Msa0733360 MtrunA17_Chr1g0189871 33.136 169 102 5 38 198 918 1083 7.29e-16 75.5
Msa0733360 MtrunA17_Chr7g0222321 30.460 174 111 4 31 197 838 1008 1.03e-15 75.1
Msa0733360 MtrunA17_Chr2g0334251 28.141 199 135 5 3 196 458 653 1.05e-15 75.1
Msa0733360 MtrunA17_Chr1g0203631 29.878 164 105 5 31 187 1101 1261 1.10e-15 75.1
Msa0733360 MtrunA17_Chr7g0222261 30.508 177 111 5 31 198 239 412 1.30e-15 74.3
Msa0733360 MtrunA17_Chr7g0232131 30.380 158 99 3 38 191 1030 1180 1.73e-15 74.7
Msa0733360 MtrunA17_Chr0c01g0489481 31.818 154 96 4 43 189 450 601 1.91e-15 74.3
Msa0733360 MtrunA17_Chr7g0231541 30.380 158 99 3 38 191 563 713 2.17e-15 74.3
Msa0733360 MtrunA17_Chr4g0070291 28.667 150 105 2 46 194 477 625 2.18e-15 73.9
Msa0733360 MtrunA17_Chr4g0058761 31.034 174 108 5 31 194 879 1050 2.51e-15 73.9
Msa0733360 MtrunA17_Chr2g0292521 34.969 163 87 7 46 194 909 1066 3.05e-15 73.9
Msa0733360 MtrunA17_Chr3g0129391 29.825 171 110 5 31 194 983 1150 3.37e-15 73.6
Msa0733360 MtrunA17_Chr7g0262141 31.429 175 110 7 32 200 824 994 3.81e-15 73.6
Msa0733360 MtrunA17_Chr3g0140861 30.168 179 108 7 31 198 768 940 4.70e-15 73.2
Msa0733360 MtrunA17_Chr4g0054521 29.670 182 113 6 29 201 795 970 6.11e-15 72.8
Msa0733360 MtrunA17_Chr1g0190411 31.250 160 103 5 45 200 835 991 6.80e-15 72.8
Msa0733360 MtrunA17_Chr3g0079661 29.651 172 112 4 30 194 1022 1191 7.10e-15 72.8
Msa0733360 MtrunA17_Chr5g0398441 28.235 170 112 4 31 194 720 885 1.28e-14 72.0
Msa0733360 MtrunA17_Chr3g0140551 32.298 161 93 7 38 189 829 982 1.62e-14 71.6
Msa0733360 MtrunA17_Chr4g0060011 27.072 181 122 4 30 204 421 597 1.94e-14 71.2
Msa0733360 MtrunA17_Chr3g0111551 30.000 170 106 6 31 194 177 339 1.94e-14 70.9
Msa0733360 MtrunA17_Chr2g0324931 30.818 159 96 4 45 195 815 967 2.10e-14 71.2
Msa0733360 MtrunA17_Chr2g0281971 30.488 164 104 4 31 188 157 316 2.37e-14 70.9
Msa0733360 MtrunA17_Chr1g0169841 28.743 167 108 4 38 196 928 1091 2.65e-14 71.2
Msa0733360 MtrunA17_Chr7g0250431 25.806 186 124 4 32 208 21 201 3.13e-14 68.6
Msa0733360 MtrunA17_Chr2g0277081 31.638 177 100 7 29 193 793 960 4.29e-14 70.5
Msa0733360 MtrunA17_Chr2g0280191 29.480 173 110 7 31 197 801 967 4.31e-14 70.5
Msa0733360 MtrunA17_Chr7g0239371 32.143 168 101 5 32 189 443 607 4.75e-14 70.1
Msa0733360 MtrunA17_Chr5g0420161 30.460 174 108 6 31 194 382 552 5.68e-14 70.1
Msa0733360 MtrunA17_Chr5g0400681 29.944 177 109 6 29 196 798 968 5.76e-14 70.1
Msa0733360 MtrunA17_Chr5g0420181 30.460 174 108 6 31 194 606 776 7.33e-14 69.7
Msa0733360 MtrunA17_Chr7g0250471 28.144 167 106 4 32 189 876 1037 8.47e-14 69.7
Msa0733360 MtrunA17_Chr8g0345561 29.310 174 114 5 31 198 917 1087 8.83e-14 69.7
Msa0733360 MtrunA17_Chr3g0123141 26.486 185 127 4 18 196 702 883 1.09e-13 69.3
Msa0733360 MtrunA17_Chr8g0359691 31.667 180 108 5 15 188 762 932 1.20e-13 69.3
Msa0733360 MtrunA17_Chr3g0095081 28.902 173 111 6 29 193 833 1001 1.22e-13 69.3
Msa0733360 MtrunA17_Chr4g0018801 28.834 163 105 6 33 188 605 763 1.42e-13 68.9
Msa0733360 MtrunA17_Chr4g0058561 31.098 164 104 4 31 188 462 622 1.59e-13 68.6
Msa0733360 MtrunA17_Chr8g0348451 28.221 163 108 4 32 188 253 412 1.65e-13 68.6
Msa0733360 MtrunA17_Chr1g0201611 26.667 165 115 2 31 189 212 376 1.79e-13 68.2
Msa0733360 MtrunA17_Chr2g0297921 31.720 186 100 8 31 199 250 425 1.86e-13 68.2
Msa0733360 MtrunA17_Chr7g0248491 28.659 164 106 5 32 188 270 429 1.96e-13 68.2
Msa0733360 MtrunA17_Chr8g0379571 30.128 156 106 2 43 196 503 657 2.16e-13 68.2
Msa0733360 MtrunA17_Chr5g0443121 29.697 165 107 4 31 189 291 452 2.24e-13 68.2
Msa0733360 MtrunA17_Chr4g0046511 29.299 157 98 4 45 194 819 969 2.41e-13 68.2
Msa0733360 MtrunA17_Chr2g0297901 32.620 187 109 8 31 205 82 263 3.07e-13 67.0
Msa0733360 MtrunA17_Chr8g0373501 31.176 170 104 6 30 189 442 608 3.24e-13 67.8
Msa0733360 MtrunA17_Chr7g0250381 25.269 186 124 5 32 208 878 1057 3.26e-13 67.8
Msa0733360 MtrunA17_Chr3g0111631 25.581 172 120 3 29 194 192 361 3.56e-13 67.4
Msa0733360 MtrunA17_Chr5g0402071 25.683 183 126 5 31 207 275 453 3.69e-13 67.4
Msa0733360 MtrunA17_Chr4g0064201 26.901 171 115 4 31 194 226 393 3.99e-13 67.4
Msa0733360 MtrunA17_Chr7g0250401 25.269 186 125 4 32 208 416 596 5.06e-13 67.0
Msa0733360 MtrunA17_Chr7g0233841 27.215 158 110 2 38 191 156 312 5.28e-13 66.6
Msa0733360 MtrunA17_Chr8g0375511 29.609 179 109 6 31 194 950 1126 6.32e-13 67.0
Msa0733360 MtrunA17_Chr3g0126181 32.075 159 96 5 45 194 889 1044 6.40e-13 67.0
Msa0733360 MtrunA17_Chr5g0405191 31.361 169 99 6 31 188 944 1106 7.49e-13 67.0
Msa0733360 MtrunA17_Chr1g0194541 30.588 170 109 5 29 191 399 566 7.51e-13 66.6
Msa0733360 MtrunA17_Chr2g0328171 27.168 173 118 3 31 197 192 362 7.94e-13 66.2
Msa0733360 MtrunA17_Chr4g0073471 29.605 152 100 3 43 189 413 562 9.10e-13 66.6
Msa0733360 MtrunA17_Chr7g0276571 30.323 155 103 3 45 196 541 693 1.04e-12 66.2
Msa0733360 MtrunA17_Chr2g0333181 28.485 165 109 4 30 188 147 308 1.22e-12 65.9
Msa0733360 MtrunA17_Chr4g0069251 31.548 168 100 6 31 189 287 448 1.24e-12 65.9
Msa0733360 MtrunA17_Chr7g0242201 29.091 165 107 4 31 189 152 312 1.53e-12 65.5
Msa0733360 MtrunA17_Chr1g0165211 25.882 170 99 4 38 192 1015 1172 1.56e-12 65.9
Msa0733360 MtrunA17_Chr3g0096351 30.539 167 103 6 31 189 289 450 2.10e-12 65.5
Msa0733360 MtrunA17_Chr2g0328211 27.485 171 114 4 31 194 179 346 2.22e-12 65.1
Msa0733360 MtrunA17_Chr2g0317071 27.160 162 109 4 33 188 904 1062 2.57e-12 65.1
Msa0733360 MtrunA17_Chr3g0091461 33.548 155 88 5 45 194 927 1071 2.85e-12 65.1
Msa0733360 MtrunA17_Chr8g0359641 27.136 199 120 6 31 207 775 970 2.99e-12 65.1
Msa0733360 MtrunA17_Chr2g0301301 27.778 180 119 4 31 200 373 551 4.23e-12 64.3
Msa0733360 MtrunA17_Chr8g0345471 30.323 155 103 4 45 196 536 688 4.85e-12 64.3
Msa0733360 MtrunA17_Chr2g0296591 30.357 168 105 5 38 195 1068 1233 5.07e-12 64.3
Msa0733360 MtrunA17_Chr3g0111581 29.091 165 112 3 31 191 187 350 5.24e-12 63.9
Msa0733360 MtrunA17_Chr5g0435211 27.059 170 116 3 31 194 193 360 5.25e-12 63.9
Msa0733360 MtrunA17_Chr7g0233881 28.977 176 116 6 38 207 788 960 5.44e-12 64.3
Msa0733360 MtrunA17_Chr2g0284041 27.811 169 95 5 31 198 550 692 5.45e-12 64.3
Msa0733360 MtrunA17_Chr7g0219611 28.743 167 109 4 30 188 620 784 5.75e-12 64.3
Msa0733360 MtrunA17_Chr4g0000081 28.144 167 116 4 31 196 516 679 6.53e-12 63.9
Msa0733360 MtrunA17_Chr8g0359651 28.659 164 108 4 31 188 775 935 7.20e-12 63.9
Msa0733360 MtrunA17_Chr2g0289161 31.646 158 100 3 45 196 545 700 7.52e-12 63.9
Msa0733360 MtrunA17_Chr7g0270121 27.647 170 114 4 29 191 488 655 8.99e-12 63.5
Msa0733360 MtrunA17_Chr2g0302631 32.317 164 102 5 32 189 293 453 9.10e-12 63.5
Msa0733360 MtrunA17_Chr3g0112391 28.409 176 118 4 23 191 445 619 9.74e-12 63.5
Msa0733360 MtrunA17_Chr8g0365701 34.862 109 68 2 85 191 20 127 1.00e-11 62.0
Msa0733360 MtrunA17_Chr7g0232631 26.708 161 104 4 38 191 838 991 1.13e-11 63.5
Msa0733360 MtrunA17_Chr6g0485721 27.711 166 113 3 30 189 203 367 1.14e-11 63.2
Msa0733360 MtrunA17_Chr1g0165901 26.471 170 98 4 38 192 1083 1240 1.15e-11 63.5
Msa0733360 MtrunA17_Chr4g0005411 27.363 201 111 3 31 196 523 723 1.35e-11 63.2
Msa0733360 MtrunA17_Chr1g0165971 27.647 170 96 5 38 192 900 1057 1.38e-11 63.2
Msa0733360 MtrunA17_Chr1g0165231 25.882 170 99 4 38 192 998 1155 1.41e-11 63.2
Msa0733360 MtrunA17_Chr1g0165301 25.882 170 99 4 38 192 998 1155 1.41e-11 63.2
Msa0733360 MtrunA17_Chr5g0393981 25.000 172 119 4 31 195 504 672 1.41e-11 63.2
Msa0733360 MtrunA17_Chr7g0271451 29.940 167 104 5 31 189 303 464 1.45e-11 62.8
Msa0733360 MtrunA17_Chr1g0174251 28.571 189 109 4 31 194 458 645 1.53e-11 62.8
Msa0733360 MtrunA17_Chr6g0487061 26.857 175 114 6 31 197 814 982 1.87e-11 62.8
Msa0733360 MtrunA17_Chr1g0165191 28.049 164 99 5 38 191 995 1149 2.14e-11 62.8
Msa0733360 MtrunA17_Chr4g0018651 29.747 158 99 6 38 188 814 966 2.30e-11 62.4
Msa0733360 MtrunA17_Chr2g0282831 28.025 157 100 4 45 194 791 941 2.42e-11 62.4
Msa0733360 MtrunA17_Chr5g0428101 27.979 193 120 7 9 188 584 770 2.48e-11 62.4
Msa0733360 MtrunA17_Chr2g0330471 30.464 151 97 4 44 189 528 675 3.28e-11 62.0
Msa0733360 MtrunA17_Chr4g0034931 27.219 169 104 5 31 188 248 408 3.97e-11 61.6
Msa0733360 MtrunA17_Chr3g0092301 27.451 204 134 7 9 201 13 213 3.98e-11 60.5
Msa0733360 MtrunA17_Chr3g0144551 27.586 174 97 7 31 188 242 402 4.90e-11 61.2
Msa0733360 MtrunA17_Chr5g0422921 26.540 211 135 8 9 205 581 785 5.04e-11 61.2
Msa0733360 MtrunA17_Chr4g0073641 25.701 214 126 7 9 191 752 963 5.83e-11 61.2
Msa0733360 MtrunA17_Chr1g0165141 26.250 160 107 4 38 191 972 1126 6.29e-11 61.2
Msa0733360 MtrunA17_Chr7g0238671 26.012 173 120 3 32 198 192 362 7.77e-11 60.5
Msa0733360 MtrunA17_Chr1g0165261 25.882 170 99 4 38 192 437 594 8.48e-11 60.8
Msa0733360 MtrunA17_Chr7g0261331 25.967 181 123 5 33 208 1042 1216 9.61e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733360 AT5G58300.3 58.788 165 65 3 31 194 467 629 3.71e-54 183
Msa0733360 AT5G58300.1 58.788 165 65 3 31 194 467 629 3.71e-54 183
Msa0733360 AT5G58300.2 58.788 165 65 3 31 194 467 629 3.71e-54 183
Msa0733360 AT2G26730.1 52.410 166 76 3 31 196 459 621 4.37e-49 169
Msa0733360 AT3G08680.1 51.786 168 78 3 29 194 448 614 1.75e-46 162
Msa0733360 AT3G08680.2 51.786 168 78 3 29 194 448 614 1.75e-46 162
Msa0733360 AT4G23740.1 50.307 163 77 4 31 191 445 605 1.40e-44 157
Msa0733360 AT4G23740.2 50.307 163 77 4 31 191 445 605 1.40e-44 157
Msa0733360 AT5G05160.1 48.795 166 78 4 32 194 455 616 7.59e-44 155
Msa0733360 AT5G41680.2 50.898 167 76 6 31 194 164 327 3.07e-42 145
Msa0733360 AT5G41680.1 50.898 167 76 6 31 194 190 353 5.53e-42 145
Msa0733360 AT1G64210.1 45.455 187 94 4 13 194 398 581 1.51e-41 148
Msa0733360 AT1G68400.1 50.000 170 74 6 31 194 472 636 2.88e-40 145
Msa0733360 AT5G53320.1 45.402 174 82 5 31 203 417 578 6.71e-40 144
Msa0733360 AT3G17840.1 45.833 168 87 3 32 196 474 640 1.13e-38 140
Msa0733360 AT1G48480.1 43.827 162 89 2 31 191 479 639 1.18e-38 140
Msa0733360 AT2G36570.1 46.961 181 77 5 31 194 467 645 1.94e-37 137
Msa0733360 AT5G16590.1 38.554 166 101 1 31 196 451 615 2.66e-35 131
Msa0733360 AT3G02880.1 36.970 165 103 1 32 196 454 617 1.11e-34 129
Msa0733360 AT3G51740.1 33.929 168 101 4 32 194 646 808 7.97e-27 107
Msa0733360 AT3G24660.1 36.264 182 106 6 31 204 482 661 2.76e-26 105
Msa0733360 AT5G24100.1 36.471 170 98 5 31 196 450 613 3.43e-26 105
Msa0733360 AT1G10850.1 41.060 151 84 2 44 191 479 627 1.64e-24 100
Msa0733360 AT5G67200.1 34.409 186 93 7 31 207 504 669 7.01e-21 90.5
Msa0733360 AT1G60630.1 36.420 162 92 3 33 191 462 615 3.72e-20 88.2
Msa0733360 AT5G07620.1 31.792 173 109 5 32 196 187 358 6.62e-20 86.7
Msa0733360 AT3G24240.1 35.000 180 103 6 31 203 901 1073 7.11e-19 84.7
Msa0733360 AT5G48940.1 34.463 177 99 5 31 198 902 1070 1.83e-18 83.6
Msa0733360 AT4G31250.1 35.294 153 95 3 46 196 492 642 1.89e-18 83.6
Msa0733360 AT5G01890.1 35.260 173 99 6 31 196 794 960 2.91e-18 82.8
Msa0733360 AT5G61480.1 34.568 162 95 6 45 200 849 1005 8.99e-18 81.6
Msa0733360 AT1G68690.1 32.335 167 104 5 31 189 482 647 1.10e-17 81.3
Msa0733360 AT1G68690.3 32.335 167 104 5 31 189 482 647 1.10e-17 81.3
Msa0733360 AT1G68690.2 32.335 167 104 5 31 189 482 647 1.10e-17 81.3
Msa0733360 AT1G25320.1 28.342 187 107 5 32 194 516 699 1.21e-17 81.3
Msa0733360 AT1G66830.1 33.898 177 90 7 31 188 507 675 1.69e-17 80.5
Msa0733360 AT5G61570.2 29.651 172 109 4 31 196 193 358 2.01e-17 79.7
Msa0733360 AT5G61570.1 29.651 172 109 4 31 196 196 361 2.03e-17 79.7
Msa0733360 AT3G24550.1 32.164 171 105 5 30 191 385 553 2.20e-17 80.5
Msa0733360 AT4G28650.1 31.875 160 102 4 45 200 828 984 2.51e-17 80.1
Msa0733360 AT3G28040.1 32.000 175 108 4 31 197 836 1007 2.98e-17 80.1
Msa0733360 AT5G38560.1 30.769 169 106 5 31 189 445 612 3.70e-17 79.7
Msa0733360 AT3G49670.1 32.240 183 109 6 29 202 796 972 5.03e-17 79.3
Msa0733360 AT1G78530.1 32.530 166 103 5 31 189 179 342 8.66e-17 77.8
Msa0733360 AT5G62710.2 30.220 182 116 5 30 204 385 562 9.10e-17 78.6
Msa0733360 AT5G62710.1 30.220 182 116 5 30 204 419 596 1.01e-16 78.6
Msa0733360 AT1G70460.1 32.738 168 104 4 30 189 458 624 1.30e-16 78.2
Msa0733360 AT3G50230.2 35.088 171 86 8 31 194 506 658 1.90e-16 77.8
Msa0733360 AT4G39400.1 30.814 172 109 5 30 194 990 1158 1.90e-16 77.8
Msa0733360 AT1G52540.1 31.073 177 114 4 30 201 147 320 2.04e-16 76.6
Msa0733360 AT3G24540.1 32.544 169 99 6 32 189 290 454 2.06e-16 77.4
Msa0733360 AT3G50230.1 35.088 171 86 8 31 194 494 646 2.06e-16 77.4
Msa0733360 AT1G26150.1 29.944 177 115 5 31 199 536 711 2.11e-16 77.4
Msa0733360 AT1G52540.2 31.073 177 114 4 30 201 144 317 2.25e-16 76.6
Msa0733360 AT1G68690.4 32.927 164 101 5 32 187 483 645 2.80e-16 77.0
Msa0733360 AT1G08590.1 33.540 161 99 5 45 200 851 1008 3.27e-16 77.0
Msa0733360 AT1G17230.2 34.568 162 97 4 38 193 916 1074 5.09e-16 76.6
Msa0733360 AT1G17230.1 34.568 162 97 4 38 193 916 1074 5.52e-16 76.3
Msa0733360 AT5G20690.1 31.333 150 100 3 46 194 510 657 7.24e-16 75.9
Msa0733360 AT2G35620.3 29.878 164 105 4 32 189 410 569 8.32e-16 75.9
Msa0733360 AT2G35620.1 29.878 164 105 4 32 189 410 569 8.32e-16 75.9
Msa0733360 AT2G35620.2 29.878 164 105 4 32 189 410 569 8.32e-16 75.9
Msa0733360 AT2G35620.4 29.878 164 105 4 32 189 410 569 8.32e-16 75.9
Msa0733360 AT1G23540.1 31.548 168 106 4 30 189 476 642 8.38e-16 75.9
Msa0733360 AT2G07040.1 32.653 147 93 5 31 173 447 591 8.39e-16 75.9
Msa0733360 AT1G72180.1 30.542 203 118 8 6 191 762 958 8.98e-16 75.9
Msa0733360 AT5G56040.2 33.136 169 91 6 45 196 879 1042 1.23e-15 75.5
Msa0733360 AT3G14840.2 33.537 164 100 4 31 188 780 940 1.86e-15 74.7
Msa0733360 AT2G39660.1 29.070 172 114 3 29 194 183 352 1.98e-15 74.3
Msa0733360 AT4G26540.1 32.738 168 91 6 44 194 879 1041 2.15e-15 74.7
Msa0733360 AT1G09970.1 30.899 178 104 9 31 197 787 956 2.18e-15 74.7
Msa0733360 AT5G49660.1 29.240 171 108 6 31 193 770 935 2.84e-15 74.3
Msa0733360 AT5G65700.1 32.584 178 107 6 29 199 800 971 3.35e-15 73.9
Msa0733360 AT5G65700.2 32.584 178 107 6 29 199 800 971 3.35e-15 73.9
Msa0733360 AT1G10620.1 31.953 169 102 5 31 189 476 641 3.62e-15 73.9
Msa0733360 AT1G29720.1 30.508 177 107 7 31 196 779 950 3.70e-15 73.9
Msa0733360 AT3G45420.1 27.749 191 120 7 15 197 443 623 4.31e-15 73.6
Msa0733360 AT2G33170.2 29.240 171 110 6 31 193 934 1101 5.13e-15 73.6
Msa0733360 AT2G33170.1 29.240 171 110 6 31 193 934 1101 5.13e-15 73.6
Msa0733360 AT1G12460.1 28.205 156 103 2 45 194 724 876 6.32e-15 73.2
Msa0733360 AT1G12460.2 27.564 156 104 2 45 194 585 737 6.98e-15 73.2
Msa0733360 AT1G31420.1 29.091 165 107 5 31 189 412 572 7.03e-15 73.2
Msa0733360 AT1G31420.3 29.091 165 107 5 31 189 412 572 7.03e-15 73.2
Msa0733360 AT1G31420.2 29.091 165 107 5 31 189 411 571 7.16e-15 73.2
Msa0733360 AT4G20270.1 29.609 179 111 6 29 197 816 989 7.37e-15 73.2
Msa0733360 AT5G63930.2 28.729 181 117 6 31 203 850 1026 8.01e-15 73.2
Msa0733360 AT5G63930.1 28.729 181 117 6 31 203 914 1090 8.88e-15 72.8
Msa0733360 AT5G35390.1 31.126 151 101 3 46 196 483 630 1.04e-14 72.4
Msa0733360 AT3G42880.1 27.815 151 106 3 46 195 484 632 1.50e-14 72.0
Msa0733360 AT2G18470.1 30.409 171 103 7 32 191 391 556 1.61e-14 72.0
Msa0733360 AT2G18470.3 30.409 171 103 7 32 191 391 556 1.61e-14 72.0
Msa0733360 AT2G18470.2 30.409 171 103 7 32 191 391 556 1.61e-14 72.0
Msa0733360 AT1G50610.1 33.077 130 81 4 46 171 498 625 2.61e-14 71.2
Msa0733360 AT2G13800.4 29.762 168 107 6 30 189 266 430 2.72e-14 71.2
Msa0733360 AT2G13800.2 29.762 168 107 6 30 189 266 430 2.72e-14 71.2
Msa0733360 AT5G13290.1 28.313 166 112 5 32 194 212 373 2.97e-14 70.9
Msa0733360 AT3G15890.1 28.249 177 117 4 30 199 146 319 3.37e-14 70.5
Msa0733360 AT3G56370.1 33.526 173 104 5 31 197 787 954 3.42e-14 71.2
Msa0733360 AT5G13290.2 28.313 166 112 5 32 194 237 398 3.49e-14 70.9
Msa0733360 AT4G01330.2 28.049 164 109 4 31 188 270 430 3.81e-14 70.9
Msa0733360 AT4G01330.1 28.049 164 109 4 31 188 270 430 4.11e-14 70.9
Msa0733360 AT1G09970.2 29.775 178 107 8 31 197 787 957 4.14e-14 70.9
Msa0733360 AT2G13790.1 29.762 168 107 6 30 189 402 566 4.90e-14 70.5
Msa0733360 AT4G01330.3 28.049 164 109 4 31 188 270 430 5.16e-14 70.5
Msa0733360 AT1G67720.1 29.508 183 116 7 13 188 697 873 5.36e-14 70.5
Msa0733360 AT2G13800.3 29.762 168 107 6 30 189 383 547 5.50e-14 70.5
Msa0733360 AT2G13800.1 29.762 168 107 6 30 189 383 547 5.50e-14 70.5
Msa0733360 AT5G16000.1 28.387 155 100 3 43 189 430 581 1.19e-13 69.3
Msa0733360 AT1G34110.1 30.159 189 111 7 31 200 882 1068 1.46e-13 69.3
Msa0733360 AT1G67510.1 28.358 201 107 3 31 194 519 719 1.52e-13 69.3
Msa0733360 AT2G15300.1 34.524 168 86 6 31 189 585 737 1.59e-13 69.3
Msa0733360 AT2G24230.1 29.310 174 114 6 31 198 680 850 1.65e-13 68.9
Msa0733360 AT5G38990.1 28.313 166 108 4 31 188 635 797 1.81e-13 68.9
Msa0733360 AT1G34110.2 30.636 173 109 6 31 194 882 1052 1.92e-13 68.9
Msa0733360 AT1G53430.1 30.939 181 113 5 31 202 777 954 1.95e-13 68.9
Msa0733360 AT3G20190.2 32.824 131 82 4 46 173 309 436 2.03e-13 68.6
Msa0733360 AT1G53430.2 30.939 181 113 5 31 202 736 913 2.11e-13 68.9
Msa0733360 AT1G62950.1 30.667 150 95 5 45 189 734 879 2.21e-13 68.9
Msa0733360 AT4G36180.1 32.934 167 97 6 31 188 951 1111 2.32e-13 68.9
Msa0733360 AT3G20190.1 32.824 131 82 4 46 173 498 625 2.36e-13 68.6
Msa0733360 AT5G58150.1 30.539 167 103 5 31 195 627 782 2.73e-13 68.6
Msa0733360 AT1G53420.1 30.387 181 111 5 15 189 722 893 3.00e-13 68.6
Msa0733360 AT1G01540.2 27.607 163 109 4 32 188 263 422 3.12e-13 68.2
Msa0733360 AT3G17420.1 31.138 167 102 5 31 189 262 423 3.32e-13 68.2
Msa0733360 AT2G02220.1 30.488 164 105 5 31 188 842 1002 3.32e-13 68.2
Msa0733360 AT5G44700.1 33.775 151 86 6 45 183 1076 1224 3.39e-13 68.2
Msa0733360 AT1G28440.1 29.878 164 102 4 38 194 805 962 3.45e-13 68.2
Msa0733360 AT1G17750.1 27.273 176 110 7 33 194 905 1076 4.55e-13 67.8
Msa0733360 AT1G70450.1 30.769 156 100 3 43 191 169 323 5.37e-13 67.4
Msa0733360 AT4G04490.1 27.919 197 119 8 1 188 421 603 5.55e-13 67.4
Msa0733360 AT2G17220.1 27.711 166 112 3 32 191 204 367 6.63e-13 67.0
Msa0733360 AT2G17220.2 27.711 166 112 3 32 191 203 366 7.01e-13 67.0
Msa0733360 AT4G02010.1 28.022 182 116 5 31 199 490 669 7.84e-13 67.0
Msa0733360 AT1G15530.1 30.556 180 114 6 27 199 463 638 8.25e-13 67.0
Msa0733360 AT1G70110.1 29.091 165 93 6 45 196 466 619 9.37e-13 67.0
Msa0733360 AT3G13065.1 32.704 159 103 4 31 188 525 680 9.99e-13 66.6
Msa0733360 AT1G09440.1 29.310 174 114 4 22 189 256 426 1.28e-12 66.2
Msa0733360 AT1G09440.2 29.310 174 114 4 22 189 256 426 1.28e-12 66.2
Msa0733360 AT4G00960.3 29.570 186 117 7 31 204 76 259 1.39e-12 65.5
Msa0733360 AT4G00960.2 29.570 186 117 7 31 204 69 252 1.76e-12 65.1
Msa0733360 AT5G18500.2 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G18500.5 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G18500.4 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G18500.1 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G18500.3 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G18500.6 30.303 165 106 4 31 189 274 435 2.31e-12 65.5
Msa0733360 AT5G60300.3 30.178 169 100 7 32 188 447 609 2.49e-12 65.5
Msa0733360 AT5G60300.1 30.178 169 100 7 32 188 447 609 2.78e-12 65.5
Msa0733360 AT5G60300.2 30.178 169 100 7 32 188 447 609 2.78e-12 65.5
Msa0733360 AT2G42960.3 28.750 160 106 3 43 197 304 460 3.04e-12 65.1
Msa0733360 AT2G42960.5 28.750 160 106 3 43 197 304 460 3.04e-12 65.1
Msa0733360 AT2G42960.4 28.750 160 106 3 43 197 304 460 3.04e-12 65.1
Msa0733360 AT2G42960.1 28.750 160 106 3 43 197 304 460 3.04e-12 65.1
Msa0733360 AT4G00960.1 29.570 186 117 7 31 204 163 346 3.31e-12 65.1
Msa0733360 AT4G35600.2 27.607 163 110 3 32 188 203 363 3.37e-12 65.1
Msa0733360 AT4G35600.1 27.607 163 110 3 32 188 202 362 3.40e-12 65.1
Msa0733360 AT1G07650.3 32.317 164 102 4 31 188 761 921 3.40e-12 65.5
Msa0733360 AT1G07650.1 32.317 164 102 4 31 188 787 947 3.42e-12 65.5
Msa0733360 AT1G07650.4 32.317 164 102 4 31 188 574 734 3.44e-12 65.1
Msa0733360 AT1G56720.3 30.539 167 101 6 32 189 288 448 3.50e-12 65.1
Msa0733360 AT1G56720.1 30.539 167 101 6 32 189 288 448 3.50e-12 65.1
Msa0733360 AT1G56720.2 30.539 167 101 6 32 189 288 448 3.50e-12 65.1
Msa0733360 AT1G56720.4 30.539 167 101 6 32 189 288 448 3.50e-12 65.1
Msa0733360 AT3G13380.1 28.488 172 114 4 32 196 968 1137 3.65e-12 65.1
Msa0733360 AT3G45430.2 31.361 169 98 7 32 188 447 609 4.11e-12 65.1
Msa0733360 AT3G45430.3 31.361 169 98 7 32 188 447 609 4.11e-12 65.1
Msa0733360 AT3G45430.1 31.361 169 98 7 32 188 447 609 4.11e-12 65.1
Msa0733360 AT1G07650.2 32.317 164 102 4 31 188 793 953 4.21e-12 65.1
Msa0733360 AT1G51790.3 27.059 170 112 5 31 193 682 846 4.27e-12 65.1
Msa0733360 AT1G51790.1 27.059 170 112 5 31 193 682 846 4.27e-12 65.1
Msa0733360 AT3G55550.1 34.091 176 85 9 32 188 451 614 5.33e-12 64.7
Msa0733360 AT3G59110.1 28.750 160 106 3 43 197 311 467 5.38e-12 64.7
Msa0733360 AT1G51790.2 27.059 170 112 5 31 193 734 898 5.62e-12 64.7
Msa0733360 AT5G07280.1 26.901 171 115 5 31 194 1025 1192 6.16e-12 64.7
Msa0733360 AT1G55610.1 27.647 170 114 4 32 194 970 1137 6.26e-12 64.7
Msa0733360 AT1G55610.2 27.647 170 114 4 32 194 970 1137 6.26e-12 64.7
Msa0733360 AT5G42440.1 29.070 172 113 3 31 196 189 357 6.88e-12 63.9
Msa0733360 AT4G02630.1 26.829 164 111 4 31 188 271 431 8.59e-12 63.9
Msa0733360 AT5G39000.1 27.108 166 110 4 31 188 628 790 9.70e-12 63.9
Msa0733360 AT5G37790.1 30.303 165 104 5 33 188 328 490 1.09e-11 63.5
Msa0733360 AT1G29750.2 31.667 180 108 5 15 188 779 949 1.28e-11 63.5
Msa0733360 AT1G29750.1 31.667 180 108 5 15 188 764 934 1.38e-11 63.5
Msa0733360 AT4G04510.2 26.531 196 126 8 1 189 422 606 1.42e-11 63.5
Msa0733360 AT4G04510.1 26.531 196 126 8 1 189 420 604 1.53e-11 63.2
Msa0733360 AT4G34500.1 28.834 163 107 5 32 188 256 415 1.65e-11 63.2
Msa0733360 AT1G54820.1 25.668 187 130 4 15 194 247 431 1.65e-11 63.2
Msa0733360 AT4G21230.1 30.256 195 112 9 32 208 441 629 1.69e-11 63.2
Msa0733360 AT1G72460.1 28.378 148 100 3 46 188 481 627 2.05e-11 62.8
Msa0733360 AT5G49760.1 27.717 184 103 5 30 196 736 906 2.10e-11 63.2
Msa0733360 AT5G24080.3 30.539 167 103 7 31 189 511 672 2.18e-11 62.8
Msa0733360 AT5G24080.1 30.539 167 103 7 31 189 511 672 2.18e-11 62.8
Msa0733360 AT5G65240.2 26.946 167 111 5 31 189 393 556 2.18e-11 62.8
Msa0733360 AT5G24080.2 30.539 167 103 7 31 189 638 799 2.31e-11 62.8
Msa0733360 AT4G34440.2 27.647 170 109 6 30 189 417 582 2.52e-11 62.8
Msa0733360 AT4G34440.1 27.647 170 109 6 30 189 417 582 2.52e-11 62.8
Msa0733360 AT4G22130.2 32.278 158 100 4 44 196 378 533 2.57e-11 62.4
Msa0733360 AT5G65240.1 26.946 167 111 5 31 189 393 556 2.89e-11 62.4
Msa0733360 AT5G25930.1 29.747 158 99 5 38 188 809 961 3.00e-11 62.4
Msa0733360 AT4G22130.1 32.278 158 100 4 44 196 519 674 3.02e-11 62.4
Msa0733360 AT1G07550.1 29.545 176 95 8 29 189 664 825 3.04e-11 62.4
Msa0733360 AT3G14350.2 39.130 92 53 2 45 134 507 597 3.55e-11 62.4
Msa0733360 AT3G14350.1 39.130 92 53 2 45 134 544 634 3.60e-11 62.4
Msa0733360 AT5G10020.2 31.902 163 91 8 46 195 844 999 3.65e-11 62.4
Msa0733360 AT5G10020.1 31.902 163 91 8 46 195 892 1047 3.71e-11 62.4
Msa0733360 AT1G27190.1 28.191 188 113 8 32 204 409 589 3.89e-11 62.0
Msa0733360 AT3G45440.2 29.012 162 99 6 37 189 507 661 4.00e-11 62.0
Msa0733360 AT3G14350.3 39.130 92 53 2 45 134 516 606 4.23e-11 62.0
Msa0733360 AT4G04570.1 27.711 166 103 6 31 188 455 611 4.46e-11 62.0
Msa0733360 AT4G20140.1 29.375 160 101 5 45 194 1081 1238 4.63e-11 62.0
Msa0733360 AT3G45440.3 29.012 162 99 6 37 189 454 608 4.70e-11 62.0
Msa0733360 AT3G45440.4 29.012 162 99 6 37 189 454 608 4.70e-11 62.0
Msa0733360 AT3G45440.1 29.012 162 99 6 37 189 454 608 4.70e-11 62.0
Msa0733360 AT5G48380.1 27.103 214 125 8 5 196 387 591 4.79e-11 62.0
Msa0733360 AT4G04540.4 27.711 166 103 6 31 188 431 587 5.75e-11 61.6
Msa0733360 AT5G60270.1 26.531 196 126 7 1 189 425 609 5.89e-11 61.6
Msa0733360 AT2G48010.1 30.120 166 105 5 31 189 394 555 6.05e-11 61.6
Msa0733360 AT4G04540.1 27.711 166 103 6 31 188 460 616 6.83e-11 61.2
Msa0733360 AT5G49780.1 29.032 186 99 7 30 196 639 810 7.93e-11 61.2
Msa0733360 AT2G37050.1 26.531 196 127 9 4 191 690 876 9.27e-11 61.2
Msa0733360 AT2G37050.3 26.531 196 127 9 4 191 691 877 9.91e-11 60.8

Find 178 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATTTCATTACCTGTTT+TGG 0.174858 5_1:-46598836 None:intergenic
ATCGGAGAGACCAAATATTT+TGG 0.194762 5_1:+46599496 Msa0733360:five_prime_UTR
CTTCTTCTTGAAATTCTTAC+AGG 0.215774 5_1:+46602391 Msa0733360:CDS
TAGAAGGCTTGGAAGGAATT+TGG 0.229388 5_1:+46599293 Msa0733360:five_prime_UTR
GTTCCTGATTTGGTTACTTA+TGG 0.229795 5_1:+46599246 Msa0733360:five_prime_UTR
TTTCGAGGATGGCACTGTTT+TGG 0.239758 5_1:+46599181 Msa0733360:five_prime_UTR
ATGAGTAAAATTGAGGTAAA+AGG 0.240969 5_1:-46598724 None:intergenic
GAAGAGAAAATTCTATGAAT+TGG 0.243285 5_1:+46598978 Msa0733360:five_prime_UTR
TTTGTTAGAATGGTTGAATT+AGG 0.246590 5_1:+46599114 Msa0733360:five_prime_UTR
TCATAGATCCTTTGGTCTTC+AGG 0.255931 5_1:-46600539 None:intergenic
GTTAGTAGTTCCAAAATATT+TGG 0.264609 5_1:-46599506 None:intergenic
GGCAAGTAGGTTTGGTCTTA+AGG 0.271319 5_1:+46599818 Msa0733360:five_prime_UTR
AAGAGAGGCCAAGCAATTTC+AGG 0.273421 5_1:+46600000 Msa0733360:five_prime_UTR
ATTGTGAAAATTTAGTGAAT+TGG 0.278980 5_1:-46598483 None:intergenic
CCATTGGCCCTTGAAATCTT+TGG 0.286224 5_1:+46600340 Msa0733360:five_prime_UTR
CAAAAGGTATTAGAAGGTTT+TGG 0.300875 5_1:+46600121 Msa0733360:five_prime_UTR
TCATTAGCAATCTCTTGTTT+TGG 0.305593 5_1:+46598743 Msa0733360:five_prime_UTR
TGAGAAGGTGGTTCCTGATT+TGG 0.320025 5_1:+46599236 Msa0733360:five_prime_UTR
TCTATGGAGCACATTCATTA+AGG 0.328465 5_1:+46599965 Msa0733360:five_prime_UTR
TTGATCTTCCAAGGTGGATT+AGG 0.331694 5_1:+46602452 Msa0733360:CDS
AATGAAATGGAGAATGCTTA+TGG 0.332682 5_1:+46598886 Msa0733360:five_prime_UTR
GAAATGAAGAGATGGGTTAT+AGG 0.332851 5_1:-46598612 None:intergenic
AATAAATCTACTCTGGTCTA+TGG 0.333425 5_1:+46600148 Msa0733360:five_prime_UTR
GATTGAGGAGAATGTGATTA+GGG 0.334477 5_1:+46598933 Msa0733360:five_prime_UTR
TTGCTTGGCCTCTCTTTCTC+TGG 0.339526 5_1:-46599993 None:intergenic
GGAGGTTCAAAATTTGTTCA+TGG 0.343129 5_1:+46602184 Msa0733360:CDS
GTGATTAGGGCGATGGCTTA+TGG 0.345718 5_1:+46598946 Msa0733360:five_prime_UTR
GAAGTTCAAAAGGTATTAGA+AGG 0.347490 5_1:+46600115 Msa0733360:five_prime_UTR
TTGTTAGAATGGTTGAATTA+GGG 0.352168 5_1:+46599115 Msa0733360:five_prime_UTR
AACAACATGAGTGGAGTTAT+AGG 0.352629 5_1:+46599442 Msa0733360:five_prime_UTR
TTTCAAATAGATTCCAAAAC+AGG 0.356714 5_1:+46598823 Msa0733360:five_prime_UTR
ACAACATGAGTGGAGTTATA+GGG 0.358612 5_1:+46599443 Msa0733360:five_prime_UTR
ACTAGTTCTCCTCCTTCTCT+TGG 0.361682 5_1:-46600027 None:intergenic
GGTCAGTTTGTTAGAGATGT+TGG 0.368673 5_1:+46599000 Msa0733360:five_prime_UTR
AGATCATAAGCAGAATAAAA+TGG 0.371183 5_1:-46602421 None:intergenic
ATGGAAGGTTTAAGAGATCT+AGG 0.371453 5_1:+46598905 Msa0733360:five_prime_UTR
GCAGAGAGAGTTTGTTAGAA+TGG 0.371832 5_1:+46599104 Msa0733360:five_prime_UTR
TTGTGAAAATTTAGTGAATT+GGG 0.377295 5_1:-46598482 None:intergenic
GGTTTAGGTAGGAGAAATGT+AGG 0.379552 5_1:+46599021 Msa0733360:five_prime_UTR
GTTCAGTGCTTGCTCACCAT+TGG 0.379668 5_1:+46600324 Msa0733360:five_prime_UTR
AGAGTCAAGATTGGAGTCTA+TGG 0.387216 5_1:+46599949 Msa0733360:five_prime_UTR
CTAACAACTTCGTCCATTGT+TGG 0.395312 5_1:-46602610 None:intergenic
TGATTGAGGAGAATGTGATT+AGG 0.395543 5_1:+46598932 Msa0733360:five_prime_UTR
TTTGTTAGAGATGTTGGTTT+AGG 0.396561 5_1:+46599006 Msa0733360:five_prime_UTR
CTCTCCGATAACGTTTCTTA+AGG 0.398707 5_1:-46599482 None:intergenic
GTCCTTATGAGACTTCAAAA+TGG 0.401518 5_1:-46600425 None:intergenic
TCGATGCTTACTTGGATAGA+AGG 0.404396 5_1:+46599277 Msa0733360:five_prime_UTR
CTTGCCTGTGGTGCAGCACC+AGG 0.405002 5_1:-46599801 None:intergenic
TGTCAAAGGTGGAAGGTAAC+AGG 0.407771 5_1:+46602587 Msa0733360:CDS
AATCAATCAAATGGTTTCAA+AGG 0.408380 5_1:+46598798 Msa0733360:five_prime_UTR
AAGAGTGATGTTTACAACTT+TGG 0.419117 5_1:+46602364 Msa0733360:CDS
CAACCATAAGTAACCAAATC+AGG 0.419881 5_1:-46599249 None:intergenic
AAGAGAAAATTCTATGAATT+GGG 0.420495 5_1:+46598979 Msa0733360:five_prime_UTR
GCACCACAGGCAAGTAGGTT+TGG 0.424922 5_1:+46599810 Msa0733360:five_prime_UTR
AAATATATCTAAAGCTATTC+CGG 0.426164 5_1:-46600462 None:intergenic
ACATTTCTTGTCCTTGATTG+AGG 0.428112 5_1:-46600495 None:intergenic
CAAGGACAAGAAATGTTTCA+TGG 0.430865 5_1:+46600502 Msa0733360:exon
ATCAATCAAATGGTTTCAAA+GGG 0.437570 5_1:+46598799 Msa0733360:five_prime_UTR
CAGTTTGCACATGAAAATCC+TGG 0.441654 5_1:+46599745 Msa0733360:five_prime_UTR
ACAATTTGTCATACCACAAA+AGG 0.441891 5_1:-46600382 None:intergenic
GGAAGAAACAATCAATCAAA+TGG 0.447161 5_1:+46598789 Msa0733360:five_prime_UTR
ATATTAAACGTCGTAACATC+AGG 0.448111 5_1:-46599144 None:intergenic
ACTAACTAATTTGACAGATT+CGG 0.448512 5_1:+46599523 Msa0733360:five_prime_UTR
AATACCTTAAGAAACGTTAT+CGG 0.450437 5_1:+46599478 Msa0733360:five_prime_UTR
GACGGATCCGTTTGTGTTTG+AGG 0.453067 5_1:+46599362 Msa0733360:five_prime_UTR
CCATGACACTTCATCATCAT+AGG 0.453937 5_1:-46599591 None:intergenic
AGGTTGGATCATAGATCCTT+TGG 0.455453 5_1:-46600547 None:intergenic
TGAGTAAAATTGAGGTAAAA+GGG 0.457528 5_1:-46598723 None:intergenic
TTGAAATGAAATGAAGAGAT+GGG 0.459600 5_1:-46598619 None:intergenic
AGGTGACTTTCACTTGAGTT+CGG 0.460453 5_1:+46599395 Msa0733360:five_prime_UTR
AGGAAGAGAAATTGTTGAAG+AGG 0.467104 5_1:+46602528 Msa0733360:CDS
TGAGATGCTTCAGATTGTAT+TGG 0.469033 5_1:+46602558 Msa0733360:CDS
CATAATGAATATTAATTCCC+AGG 0.471938 5_1:-46599763 None:intergenic
ATTCAATCTTGAAGAATACT+TGG 0.475080 5_1:+46599689 Msa0733360:five_prime_UTR
TTCTTGAGCGTGGTATCCGT+TGG 0.475494 5_1:-46602311 None:intergenic
TGGTTTGAATAAATCTACTC+TGG 0.475497 5_1:+46600141 Msa0733360:five_prime_UTR
AGAAATTGTTGAAGAGGAGA+TGG 0.475894 5_1:+46602534 Msa0733360:CDS
CACAAGAACAGAGTCAAGAT+TGG 0.480085 5_1:+46599940 Msa0733360:five_prime_UTR
GAGGAGCTGTGAGTATTTGA+TGG 0.483333 5_1:+46599913 Msa0733360:five_prime_UTR
TTGGCCCTTGAAATCTTTGG+TGG 0.484492 5_1:+46600343 Msa0733360:five_prime_UTR
GCTTACTTGGATAGAAGGCT+TGG 0.489558 5_1:+46599282 Msa0733360:five_prime_UTR
TGATTGTCCGCGGTTGTTGA+CGG 0.495588 5_1:+46599344 Msa0733360:five_prime_UTR
ACATCAGTGATGCAACCATC+AGG 0.495712 5_1:-46602244 None:intergenic
TACACCTGGTGCTGCACCAC+AGG 0.497157 5_1:+46599797 Msa0733360:five_prime_UTR
GAGATCCACCAAAGATTTCA+AGG 0.498579 5_1:-46600348 None:intergenic
CTTCGGTTGAGAAGTTCAAA+AGG 0.498726 5_1:+46600105 Msa0733360:five_prime_UTR
TTTGAAATGAAATGAAGAGA+TGG 0.500918 5_1:-46598620 None:intergenic
TTAGAGATGTTGGTTTAGGT+AGG 0.503038 5_1:+46599010 Msa0733360:five_prime_UTR
TCCAAGGTGGATTAGGTCTG+TGG 0.506271 5_1:+46602459 Msa0733360:CDS
CAGACAGATTCTGGCAACTT+CGG 0.512606 5_1:+46600088 Msa0733360:five_prime_UTR
CTGTATGAGCTAGATGAAAA+CGG 0.518784 5_1:+46600590 Msa0733360:CDS
CCTAAAACCTCAAACACAAA+CGG 0.528045 5_1:-46599369 None:intergenic
TTGACATGGTTGATCTTCCA+AGG 0.529419 5_1:+46602443 Msa0733360:CDS
AGGACTTACTTAGTCGCCTC+CGG 0.529466 5_1:+46600443 Msa0733360:five_prime_UTR
TTCAATGAGGAGATGATGAG+AGG 0.529625 5_1:+46602508 Msa0733360:CDS
CAATCTTGACTCTGTTCTTG+TGG 0.534223 5_1:-46599939 None:intergenic
ATTGCTAATGAGTAAAATTG+AGG 0.536863 5_1:-46598731 None:intergenic
GTTATGACGACGATGATGAT+GGG 0.537481 5_1:-46598399 None:intergenic
ATACTCACAGCTCCTCAGTT+GGG 0.537892 5_1:-46599906 None:intergenic
TGAAGACGAGTCCTCAATCA+AGG 0.542652 5_1:+46600484 Msa0733360:five_prime_UTR
GATGGTTGCATCACTGATGT+TGG 0.543268 5_1:+46602247 Msa0733360:CDS
AGCATAGTGGCAGATACAAA+AGG 0.545227 5_1:+46600182 Msa0733360:five_prime_UTR
GGTTATGACGACGATGATGA+TGG 0.545855 5_1:-46598400 None:intergenic
GGTCTGTGGTTTGTGAGGAA+TGG 0.546647 5_1:+46602473 Msa0733360:CDS
TTGTGTTGTCGATGCTTACT+TGG 0.547691 5_1:+46599269 Msa0733360:five_prime_UTR
ACTTGGATAGAAGGCTTGGA+AGG 0.547884 5_1:+46599286 Msa0733360:five_prime_UTR
GGAGAATGTGATTAGGGCGA+TGG 0.550533 5_1:+46598939 Msa0733360:five_prime_UTR
GATTAGGTCTGTGGTTTGTG+AGG 0.551466 5_1:+46602468 Msa0733360:CDS
AATACTCACAGCTCCTCAGT+TGG 0.554444 5_1:-46599907 None:intergenic
GGTGAAACTAAAAGACGGTA+TGG 0.555287 5_1:+46599710 Msa0733360:five_prime_UTR
TTCAGCGCAAATGTCCATCC+AGG 0.556141 5_1:-46600567 None:intergenic
AAATGGAGAATGCTTATGGA+AGG 0.557066 5_1:+46598890 Msa0733360:five_prime_UTR
CGATGATGATGGGGTTGTTG+TGG 0.559312 5_1:-46598389 None:intergenic
TTCTGCTTATGATCTTGACA+TGG 0.561366 5_1:+46602429 Msa0733360:CDS
GTGTAGTGTAACATCAATGA+AGG 0.563891 5_1:-46598533 None:intergenic
TGTATTGGCTTGTGTGTCAA+AGG 0.565320 5_1:+46602573 Msa0733360:CDS
TCTGGTCTATGGAAGTGTGC+AGG 0.566692 5_1:+46600159 Msa0733360:five_prime_UTR
GGTCTTCAGGAAACATCCCT+AGG 0.569027 5_1:-46600526 None:intergenic
TGGTTTGTGATTGATGAAAG+AGG 0.575616 5_1:-46598565 None:intergenic
GTTTAGGTAGGAGAAATGTA+GGG 0.576945 5_1:+46599022 Msa0733360:five_prime_UTR
AAGAAATGTTTCATGGACCT+AGG 0.582195 5_1:+46600509 Msa0733360:exon
CCAAAGATTTCAAGGGCCAA+TGG 0.583755 5_1:-46600340 None:intergenic
TTCATCAATCACAAACCACA+TGG 0.584644 5_1:+46598570 Msa0733360:five_prime_UTR
TTCTAGTGTTATGAGTACAT+TGG 0.587586 5_1:-46602221 None:intergenic
GCGCAAATGTCCATCCAGGT+TGG 0.587752 5_1:-46600563 None:intergenic
TCAGGAAAACCAAGAGAAGG+AGG 0.589853 5_1:+46600018 Msa0733360:five_prime_UTR
GGAAGTGTGCAGGAGCATAG+TGG 0.590110 5_1:+46600169 Msa0733360:five_prime_UTR
GGAAGGTAACAGGCCAACAA+TGG 0.590867 5_1:+46602597 Msa0733360:CDS
AGAAATGTTTCATGGACCTA+GGG 0.592884 5_1:+46600510 Msa0733360:exon
TGAACATATGCGAAGTGAGA+AGG 0.592997 5_1:+46599221 Msa0733360:five_prime_UTR
GAAAATTTAGTGAATTGGGT+TGG 0.593138 5_1:-46598478 None:intergenic
GTGCTGCACCACAGGCAAGT+AGG 0.593857 5_1:+46599805 Msa0733360:five_prime_UTR
GGTTTGTGATTGATGAAAGA+GGG 0.598298 5_1:-46598564 None:intergenic
GATCTATGATCCAACCTGGA+TGG 0.601268 5_1:+46600553 Msa0733360:CDS
TGGTTGATGAGGTGTTCACA+AGG 0.603585 5_1:-46602279 None:intergenic
ACCACAGACCTAATCCACCT+TGG 0.605237 5_1:-46602460 None:intergenic
AGGTTGTGCCAGAGAAAGAG+AGG 0.606806 5_1:+46599985 Msa0733360:five_prime_UTR
AGTTTGCACATGAAAATCCT+GGG 0.608018 5_1:+46599746 Msa0733360:five_prime_UTR
ATTCAGTTACTTCTTGAGCG+TGG 0.616342 5_1:-46602321 None:intergenic
ATGTACATCATTCCTACACC+TGG 0.618397 5_1:+46599783 Msa0733360:five_prime_UTR
ATTTCAGGAAAACCAAGAGA+AGG 0.620486 5_1:+46600015 Msa0733360:five_prime_UTR
TGTGGTTTGTGAGGAATGGA+CGG 0.622419 5_1:+46602477 Msa0733360:CDS
CTCATAACACTAGAACCTGA+TGG 0.622482 5_1:+46602229 Msa0733360:CDS
ACAAGACACAACAACATGAG+TGG 0.626523 5_1:+46599433 Msa0733360:five_prime_UTR
TGACTTTCACTTGAGTTCGG+AGG 0.628971 5_1:+46599398 Msa0733360:five_prime_UTR
TGTGGTGCAGCACCAGGTGT+AGG 0.629180 5_1:-46599795 None:intergenic
AAAGGATCTATGATCCAACC+TGG 0.629967 5_1:+46600549 Msa0733360:CDS
GGATGTTTCCTGAAGACCAA+AGG 0.631486 5_1:+46600531 Msa0733360:CDS
GGATCTTGACATGGTTGATG+AGG 0.632032 5_1:-46602290 None:intergenic
TGAGCTAGATGAAAACGGAA+AGG 0.633021 5_1:+46600595 Msa0733360:CDS
ATTGGCTTGTGTGTCAAAGG+TGG 0.634697 5_1:+46602576 Msa0733360:CDS
CTGCAGGAAAGGTGAAATTG+TGG 0.637684 5_1:+46598768 Msa0733360:five_prime_UTR
AGATCCACCAAAGATTTCAA+GGG 0.640608 5_1:-46600347 None:intergenic
TAGTTAATTTGACACAATGG+TGG 0.641939 5_1:+46599565 Msa0733360:five_prime_UTR
TGTGCATCATGCAATTCTTG+CGG 0.643046 5_1:-46600052 None:intergenic
ATTGCTTCCATCCACACAGG+AGG 0.643364 5_1:+46602166 Msa0733360:CDS
GTTTAAGAGTTGTTCCCATG+TGG 0.645197 5_1:-46598585 None:intergenic
GTATCCGTTGGATCTTGACA+TGG 0.645367 5_1:-46602299 None:intergenic
TCAACCATGTCAAGATCCAA+CGG 0.650637 5_1:+46602295 Msa0733360:CDS
CAGATACAAAAGGCTTGCTG+AGG 0.655448 5_1:+46600192 Msa0733360:five_prime_UTR
ACATGGTTGATCTTCCAAGG+TGG 0.663128 5_1:+46602446 Msa0733360:CDS
GTGTAGTTAATTTGACACAA+TGG 0.664131 5_1:+46599562 Msa0733360:five_prime_UTR
AACGGATCCGTCAACAACCG+CGG 0.664779 5_1:-46599351 None:intergenic
GGAATTGCTTCCATCCACAC+AGG 0.668826 5_1:+46602163 Msa0733360:CDS
TTATGACGACGATGATGATG+GGG 0.668864 5_1:-46598398 None:intergenic
TCATCAATCACAAACCACAT+GGG 0.677685 5_1:+46598571 Msa0733360:five_prime_UTR
AGACCAAACCTACTTGCCTG+TGG 0.684917 5_1:-46599813 None:intergenic
TACTTGGTGAAACTAAAAGA+CGG 0.686527 5_1:+46599705 Msa0733360:five_prime_UTR
ACATATGCGAAGTGAGAAGG+TGG 0.686550 5_1:+46599224 Msa0733360:five_prime_UTR
TTATACATTAGATTCAGACT+CGG 0.687875 5_1:-46602684 None:intergenic
GCTTGTGTGTCAAAGGTGGA+AGG 0.689374 5_1:+46602580 Msa0733360:CDS
GGTTGATGAGGTGTTCACAA+GGG 0.691472 5_1:-46602278 None:intergenic
TATATCTAAAGCTATTCCGG+AGG 0.693207 5_1:-46600459 None:intergenic
CCTATGATGATGAAGTGTCA+TGG 0.694493 5_1:+46599591 Msa0733360:five_prime_UTR
GTAAACATCACTCTTCTGAG+TGG 0.720243 5_1:-46602356 None:intergenic
ACAGTTTCAGATCCCAACTG+AGG 0.724828 5_1:+46599894 Msa0733360:five_prime_UTR
ATGATGATGAAGTGTCATGG+TGG 0.746036 5_1:+46599594 Msa0733360:five_prime_UTR
TGGACGTGGATGATTGTCCG+CGG 0.772164 5_1:+46599334 Msa0733360:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCTTTATTTTTTTAAAAAAA+AGG - chr5_1:46601795-46601814 None:intergenic 10.0%
!!! AAAGATTCAATTTTGTTAAT+GGG - chr5_1:46598425-46598444 None:intergenic 15.0%
!!! AAAAGATTCAATTTTGTTAA+TGG - chr5_1:46598426-46598445 None:intergenic 15.0%
!!! ATTTTTTTATGCTTAACTTA+TGG - chr5_1:46600633-46600652 None:intergenic 15.0%
!!! AAGATTCAATTTTGTTAATG+GGG - chr5_1:46598424-46598443 None:intergenic 20.0%
!! TTGTGAAAATTTAGTGAATT+GGG - chr5_1:46598485-46598504 None:intergenic 20.0%
!! ATTGTGAAAATTTAGTGAAT+TGG - chr5_1:46598486-46598505 None:intergenic 20.0%
!! AAGAGAAAATTCTATGAATT+GGG + chr5_1:46598979-46598998 Msa0733360:five_prime_UTR 20.0%
!!! TCTTTTTAACAAACATGATT+AGG - chr5_1:46600275-46600294 None:intergenic 20.0%
!!! AAATATATCTAAAGCTATTC+CGG - chr5_1:46600465-46600484 None:intergenic 20.0%
!!! TTATTTTGTGCTTAAGTTAA+CGG + chr5_1:46600677-46600696 Msa0733360:intron 20.0%
!! AAAATTGTAGAATGTCAATT+AGG + chr5_1:46600781-46600800 Msa0733360:intron 20.0%
!!! TGATTCTTATGCATAATTTT+AGG + chr5_1:46600990-46601009 Msa0733360:intron 20.0%
!!! GATTCTTATGCATAATTTTA+GGG + chr5_1:46600991-46601010 Msa0733360:intron 20.0%
!! GAAATTATAGTACAATTCTT+TGG - chr5_1:46601131-46601150 None:intergenic 20.0%
!!! TTTTTTTACAATTCCAATGA+AGG + chr5_1:46601161-46601180 Msa0733360:intron 20.0%
!! TAAATAGTATTCTTTGCAAA+AGG - chr5_1:46601236-46601255 None:intergenic 20.0%
!!! ATTCAAACTCTTTTAACTAA+AGG - chr5_1:46601447-46601466 None:intergenic 20.0%
!!! TAAATTTGAAGTTCAAGAAA+AGG + chr5_1:46601647-46601666 Msa0733360:intron 20.0%
!!! TTTTTACTGAAAAGTGTATT+AGG + chr5_1:46601928-46601947 Msa0733360:intron 20.0%
!!! AAAAATGGTGTTTTTGAAGT+GGG - chr5_1:46598455-46598474 None:intergenic 25.0%
! TTGAAATGAAATGAAGAGAT+GGG - chr5_1:46598622-46598641 None:intergenic 25.0%
!! TTTGAAATGAAATGAAGAGA+TGG - chr5_1:46598623-46598642 None:intergenic 25.0%
! TGAGTAAAATTGAGGTAAAA+GGG - chr5_1:46598726-46598745 None:intergenic 25.0%
! ATGAGTAAAATTGAGGTAAA+AGG - chr5_1:46598727-46598746 None:intergenic 25.0%
! ATTGCTAATGAGTAAAATTG+AGG - chr5_1:46598734-46598753 None:intergenic 25.0%
! AATCAATCAAATGGTTTCAA+AGG + chr5_1:46598798-46598817 Msa0733360:five_prime_UTR 25.0%
! ATCAATCAAATGGTTTCAAA+GGG + chr5_1:46598799-46598818 Msa0733360:five_prime_UTR 25.0%
! TTTCAAATAGATTCCAAAAC+AGG + chr5_1:46598823-46598842 Msa0733360:five_prime_UTR 25.0%
!!! TTTTGGTAGTTTGAATGAAA+TGG + chr5_1:46598873-46598892 Msa0733360:five_prime_UTR 25.0%
! GAAGAGAAAATTCTATGAAT+TGG + chr5_1:46598978-46598997 Msa0733360:five_prime_UTR 25.0%
! TTTGTTAGAATGGTTGAATT+AGG + chr5_1:46599114-46599133 Msa0733360:five_prime_UTR 25.0%
! TTGTTAGAATGGTTGAATTA+GGG + chr5_1:46599115-46599134 Msa0733360:five_prime_UTR 25.0%
!!! GGAGTTTGTTTTGAATAAAA+TGG + chr5_1:46599314-46599333 Msa0733360:five_prime_UTR 25.0%
! AATACCTTAAGAAACGTTAT+CGG + chr5_1:46599478-46599497 Msa0733360:five_prime_UTR 25.0%
! GTTAGTAGTTCCAAAATATT+TGG - chr5_1:46599509-46599528 None:intergenic 25.0%
! ACTAACTAATTTGACAGATT+CGG + chr5_1:46599523-46599542 Msa0733360:five_prime_UTR 25.0%
! ATTCAATCTTGAAGAATACT+TGG + chr5_1:46599689-46599708 Msa0733360:five_prime_UTR 25.0%
! CATAATGAATATTAATTCCC+AGG - chr5_1:46599766-46599785 None:intergenic 25.0%
! AAATGCACTAAAAATCAGAA+AGG + chr5_1:46600218-46600237 Msa0733360:five_prime_UTR 25.0%
! AAGTATCTTTATCTTCAGAT+TGG - chr5_1:46600924-46600943 None:intergenic 25.0%
!!! ACAACTTGTTACATGATAAA+AGG - chr5_1:46600960-46600979 None:intergenic 25.0%
! GGAAAATAAATAAATAGTCC+CGG - chr5_1:46601215-46601234 None:intergenic 25.0%
!!! CTTGTTTTTGAAACAATGTA+AGG + chr5_1:46601340-46601359 Msa0733360:intron 25.0%
!! TGTAAGGACAAATTTTATGT+TGG + chr5_1:46601356-46601375 Msa0733360:intron 25.0%
! AAAAATGATTATCATGTAGC+AGG - chr5_1:46601543-46601562 None:intergenic 25.0%
! GTTTGTAAACCAATCATATA+CGG + chr5_1:46601723-46601742 Msa0733360:intron 25.0%
! CAAGTAATAAATCGAGAAAA+TGG - chr5_1:46601871-46601890 None:intergenic 25.0%
!! CACTTTTCAGTAAAAATACT+TGG - chr5_1:46601924-46601943 None:intergenic 25.0%
! AGATCATAAGCAGAATAAAA+TGG - chr5_1:46602424-46602443 None:intergenic 25.0%
!!! TAGTACTCTTTTTTCAACTT+AGG - chr5_1:46602658-46602677 None:intergenic 25.0%
!!! AAAATGGTGTTTTTGAAGTG+GGG - chr5_1:46598454-46598473 None:intergenic 30.0%
!! CAAAAATGGTGTTTTTGAAG+TGG - chr5_1:46598456-46598475 None:intergenic 30.0%
GAAAATTTAGTGAATTGGGT+TGG - chr5_1:46598481-46598500 None:intergenic 30.0%
! TTGATGAAAGAGGGAATTTT+CGG - chr5_1:46598558-46598577 None:intergenic 30.0%
!! TCATTAGCAATCTCTTGTTT+TGG + chr5_1:46598743-46598762 Msa0733360:five_prime_UTR 30.0%
GGAAGAAACAATCAATCAAA+TGG + chr5_1:46598789-46598808 Msa0733360:five_prime_UTR 30.0%
! GAGAATTTCATTACCTGTTT+TGG - chr5_1:46598839-46598858 None:intergenic 30.0%
! CTCTTGTGTTATAGTGTTTT+TGG + chr5_1:46598856-46598875 Msa0733360:five_prime_UTR 30.0%
AATGAAATGGAGAATGCTTA+TGG + chr5_1:46598886-46598905 Msa0733360:five_prime_UTR 30.0%
!! TTTGTTAGAGATGTTGGTTT+AGG + chr5_1:46599006-46599025 Msa0733360:five_prime_UTR 30.0%
!!! TGCTGCTAATTTTAAGATGA+AGG + chr5_1:46599077-46599096 Msa0733360:five_prime_UTR 30.0%
!!! GCTGCTAATTTTAAGATGAA+GGG + chr5_1:46599078-46599097 Msa0733360:five_prime_UTR 30.0%
ATATTAAACGTCGTAACATC+AGG - chr5_1:46599147-46599166 None:intergenic 30.0%
!! TGTTTTGAATAAAATGGACG+TGG + chr5_1:46599320-46599339 Msa0733360:five_prime_UTR 30.0%
! GTGTAGTTAATTTGACACAA+TGG + chr5_1:46599562-46599581 Msa0733360:five_prime_UTR 30.0%
! TAGTTAATTTGACACAATGG+TGG + chr5_1:46599565-46599584 Msa0733360:five_prime_UTR 30.0%
! TACTTGGTGAAACTAAAAGA+CGG + chr5_1:46599705-46599724 Msa0733360:five_prime_UTR 30.0%
!!! TTTTTGAAACAGACAGATTC+TGG + chr5_1:46600079-46600098 Msa0733360:five_prime_UTR 30.0%
!! GAAGTTCAAAAGGTATTAGA+AGG + chr5_1:46600115-46600134 Msa0733360:five_prime_UTR 30.0%
!!! CAAAAGGTATTAGAAGGTTT+TGG + chr5_1:46600121-46600140 Msa0733360:five_prime_UTR 30.0%
TGGTTTGAATAAATCTACTC+TGG + chr5_1:46600141-46600160 Msa0733360:five_prime_UTR 30.0%
AATAAATCTACTCTGGTCTA+TGG + chr5_1:46600148-46600167 Msa0733360:five_prime_UTR 30.0%
ACAATTTGTCATACCACAAA+AGG - chr5_1:46600385-46600404 None:intergenic 30.0%
! TTTTGTGGTATGACAAATTG+TGG + chr5_1:46600384-46600403 Msa0733360:five_prime_UTR 30.0%
!! ACTATGATTTTAGCCAACAA+TGG + chr5_1:46600728-46600747 Msa0733360:intron 30.0%
ACTATGATGATAACCATTGT+TGG - chr5_1:46600744-46600763 None:intergenic 30.0%
! GATAAATTTTCCCACAAAGA+AGG - chr5_1:46600893-46600912 None:intergenic 30.0%
ACACATCTGTGACAAATAAA+AGG + chr5_1:46601036-46601055 Msa0733360:intron 30.0%
TGTTTCAAAAACAAGTGAGA+CGG - chr5_1:46601335-46601354 None:intergenic 30.0%
AAGTAAAGTCTTGCATCTAA+CGG - chr5_1:46601420-46601439 None:intergenic 30.0%
!! TAAAAAAAAGGTGTCAGAGT+TGG - chr5_1:46601783-46601802 None:intergenic 30.0%
TCGATTTATTACTTGTGTGA+CGG + chr5_1:46601876-46601895 Msa0733360:intron 30.0%
ATAAGGCAATGATATAGACA+TGG - chr5_1:46602061-46602080 None:intergenic 30.0%
! TTCCTTATGTTGTTTGCAAA+GGG - chr5_1:46602095-46602114 None:intergenic 30.0%
! TTTCCTTATGTTGTTTGCAA+AGG - chr5_1:46602096-46602115 None:intergenic 30.0%
CAAACAACATAAGGAAACAA+GGG + chr5_1:46602099-46602118 Msa0733360:intron 30.0%
TTCTAGTGTTATGAGTACAT+TGG - chr5_1:46602224-46602243 None:intergenic 30.0%
AAGAGTGATGTTTACAACTT+TGG + chr5_1:46602364-46602383 Msa0733360:CDS 30.0%
CTTCTTCTTGAAATTCTTAC+AGG + chr5_1:46602391-46602410 Msa0733360:CDS 30.0%
GTGTAGTGTAACATCAATGA+AGG - chr5_1:46598536-46598555 None:intergenic 35.0%
GGTTTGTGATTGATGAAAGA+GGG - chr5_1:46598567-46598586 None:intergenic 35.0%
! TGGTTTGTGATTGATGAAAG+AGG - chr5_1:46598568-46598587 None:intergenic 35.0%
TTCATCAATCACAAACCACA+TGG + chr5_1:46598570-46598589 Msa0733360:five_prime_UTR 35.0%
TCATCAATCACAAACCACAT+GGG + chr5_1:46598571-46598590 Msa0733360:five_prime_UTR 35.0%
!! GAAATGAAGAGATGGGTTAT+AGG - chr5_1:46598615-46598634 None:intergenic 35.0%
AAATGGAGAATGCTTATGGA+AGG + chr5_1:46598890-46598909 Msa0733360:five_prime_UTR 35.0%
ATGGAAGGTTTAAGAGATCT+AGG + chr5_1:46598905-46598924 Msa0733360:five_prime_UTR 35.0%
!! GAGATCTAGGTTTTTGATTG+AGG + chr5_1:46598918-46598937 Msa0733360:five_prime_UTR 35.0%
TGATTGAGGAGAATGTGATT+AGG + chr5_1:46598932-46598951 Msa0733360:five_prime_UTR 35.0%
GATTGAGGAGAATGTGATTA+GGG + chr5_1:46598933-46598952 Msa0733360:five_prime_UTR 35.0%
!! TTAGAGATGTTGGTTTAGGT+AGG + chr5_1:46599010-46599029 Msa0733360:five_prime_UTR 35.0%
GTTTAGGTAGGAGAAATGTA+GGG + chr5_1:46599022-46599041 Msa0733360:five_prime_UTR 35.0%
! GAAATGTAGGGAATCTTTTG+TGG + chr5_1:46599034-46599053 Msa0733360:five_prime_UTR 35.0%
!! GTTCCTGATTTGGTTACTTA+TGG + chr5_1:46599246-46599265 Msa0733360:five_prime_UTR 35.0%
CAACCATAAGTAACCAAATC+AGG - chr5_1:46599252-46599271 None:intergenic 35.0%
CCTAAAACCTCAAACACAAA+CGG - chr5_1:46599372-46599391 None:intergenic 35.0%
!!! GTGTTTGAGGTTTTAGGTAA+AGG + chr5_1:46599375-46599394 Msa0733360:five_prime_UTR 35.0%
AACAACATGAGTGGAGTTAT+AGG + chr5_1:46599442-46599461 Msa0733360:five_prime_UTR 35.0%
ACAACATGAGTGGAGTTATA+GGG + chr5_1:46599443-46599462 Msa0733360:five_prime_UTR 35.0%
! ATCGGAGAGACCAAATATTT+TGG + chr5_1:46599496-46599515 Msa0733360:five_prime_UTR 35.0%
AGTTTGCACATGAAAATCCT+GGG + chr5_1:46599746-46599765 Msa0733360:five_prime_UTR 35.0%
TCTATGGAGCACATTCATTA+AGG + chr5_1:46599965-46599984 Msa0733360:five_prime_UTR 35.0%
!! TTGGTTTTCCTGAAATTGCT+TGG - chr5_1:46600011-46600030 None:intergenic 35.0%
ATTTCAGGAAAACCAAGAGA+AGG + chr5_1:46600015-46600034 Msa0733360:five_prime_UTR 35.0%
AGATCCACCAAAGATTTCAA+GGG - chr5_1:46600350-46600369 None:intergenic 35.0%
!!! GTCCATTTTGAAGTCTCATA+AGG + chr5_1:46600423-46600442 Msa0733360:five_prime_UTR 35.0%
GTCCTTATGAGACTTCAAAA+TGG - chr5_1:46600428-46600447 None:intergenic 35.0%
! TATATCTAAAGCTATTCCGG+AGG - chr5_1:46600462-46600481 None:intergenic 35.0%
ACATTTCTTGTCCTTGATTG+AGG - chr5_1:46600498-46600517 None:intergenic 35.0%
CAAGGACAAGAAATGTTTCA+TGG + chr5_1:46600502-46600521 Msa0733360:exon 35.0%
AAGAAATGTTTCATGGACCT+AGG + chr5_1:46600509-46600528 Msa0733360:exon 35.0%
AGAAATGTTTCATGGACCTA+GGG + chr5_1:46600510-46600529 Msa0733360:exon 35.0%
CTGTATGAGCTAGATGAAAA+CGG + chr5_1:46600590-46600609 Msa0733360:CDS 35.0%
TTTGTCACAGATGTGTTCAT+TGG - chr5_1:46601032-46601051 None:intergenic 35.0%
GTTTCAAAAACAAGTGAGAC+GGG - chr5_1:46601334-46601353 None:intergenic 35.0%
AGTAAAGTCTTGCATCTAAC+GGG - chr5_1:46601419-46601438 None:intergenic 35.0%
! ACGTCTTAAATCTGAAGTGT+GGG - chr5_1:46601751-46601770 None:intergenic 35.0%
! AAAAGTGTATTAGGCTTGCT+AGG + chr5_1:46601937-46601956 Msa0733360:intron 35.0%
! AAAGGGCATATCGAACAATA+AGG - chr5_1:46602078-46602097 None:intergenic 35.0%
GCAAACAACATAAGGAAACA+AGG + chr5_1:46602098-46602117 Msa0733360:intron 35.0%
! GGAGGTTCAAAATTTGTTCA+TGG + chr5_1:46602184-46602203 Msa0733360:CDS 35.0%
TTCTGCTTATGATCTTGACA+TGG + chr5_1:46602429-46602448 Msa0733360:CDS 35.0%
AGGAAGAGAAATTGTTGAAG+AGG + chr5_1:46602528-46602547 Msa0733360:CDS 35.0%
AGAAATTGTTGAAGAGGAGA+TGG + chr5_1:46602534-46602553 Msa0733360:CDS 35.0%
TGAGATGCTTCAGATTGTAT+TGG + chr5_1:46602558-46602577 Msa0733360:CDS 35.0%
!!! ACTCTTTTTTCAACTTAGGC+TGG - chr5_1:46602654-46602673 None:intergenic 35.0%
! TTATGACGACGATGATGATG+GGG - chr5_1:46598401-46598420 None:intergenic 40.0%
GTTATGACGACGATGATGAT+GGG - chr5_1:46598402-46598421 None:intergenic 40.0%
!! GAATTGGGTTGGTGCAAAAA+TGG - chr5_1:46598470-46598489 None:intergenic 40.0%
GTTTAAGAGTTGTTCCCATG+TGG - chr5_1:46598588-46598607 None:intergenic 40.0%
!! GGTCAGTTTGTTAGAGATGT+TGG + chr5_1:46599000-46599019 Msa0733360:five_prime_UTR 40.0%
GGTTTAGGTAGGAGAAATGT+AGG + chr5_1:46599021-46599040 Msa0733360:five_prime_UTR 40.0%
!! GCAGAGAGAGTTTGTTAGAA+TGG + chr5_1:46599104-46599123 Msa0733360:five_prime_UTR 40.0%
TGAACATATGCGAAGTGAGA+AGG + chr5_1:46599221-46599240 Msa0733360:five_prime_UTR 40.0%
TTGTGTTGTCGATGCTTACT+TGG + chr5_1:46599269-46599288 Msa0733360:five_prime_UTR 40.0%
TCGATGCTTACTTGGATAGA+AGG + chr5_1:46599277-46599296 Msa0733360:five_prime_UTR 40.0%
TAGAAGGCTTGGAAGGAATT+TGG + chr5_1:46599293-46599312 Msa0733360:five_prime_UTR 40.0%
!! CCGTTTGTGTTTGAGGTTTT+AGG + chr5_1:46599369-46599388 Msa0733360:five_prime_UTR 40.0%
AGGTGACTTTCACTTGAGTT+CGG + chr5_1:46599395-46599414 Msa0733360:five_prime_UTR 40.0%
ACAAGACACAACAACATGAG+TGG + chr5_1:46599433-46599452 Msa0733360:five_prime_UTR 40.0%
CTCTCCGATAACGTTTCTTA+AGG - chr5_1:46599485-46599504 None:intergenic 40.0%
CCATGACACTTCATCATCAT+AGG - chr5_1:46599594-46599613 None:intergenic 40.0%
! CCTATGATGATGAAGTGTCA+TGG + chr5_1:46599591-46599610 Msa0733360:five_prime_UTR 40.0%
! ATGATGATGAAGTGTCATGG+TGG + chr5_1:46599594-46599613 Msa0733360:five_prime_UTR 40.0%
GGTGAAACTAAAAGACGGTA+TGG + chr5_1:46599710-46599729 Msa0733360:five_prime_UTR 40.0%
CAGTTTGCACATGAAAATCC+TGG + chr5_1:46599745-46599764 Msa0733360:five_prime_UTR 40.0%
ATGTACATCATTCCTACACC+TGG + chr5_1:46599783-46599802 Msa0733360:five_prime_UTR 40.0%
CAATCTTGACTCTGTTCTTG+TGG - chr5_1:46599942-46599961 None:intergenic 40.0%
CACAAGAACAGAGTCAAGAT+TGG + chr5_1:46599940-46599959 Msa0733360:five_prime_UTR 40.0%
AGAGTCAAGATTGGAGTCTA+TGG + chr5_1:46599949-46599968 Msa0733360:five_prime_UTR 40.0%
TGTGCATCATGCAATTCTTG+CGG - chr5_1:46600055-46600074 None:intergenic 40.0%
CTTCGGTTGAGAAGTTCAAA+AGG + chr5_1:46600105-46600124 Msa0733360:five_prime_UTR 40.0%
AGCATAGTGGCAGATACAAA+AGG + chr5_1:46600182-46600201 Msa0733360:five_prime_UTR 40.0%
GAGATCCACCAAAGATTTCA+AGG - chr5_1:46600351-46600370 None:intergenic 40.0%
! TCATAGATCCTTTGGTCTTC+AGG - chr5_1:46600542-46600561 None:intergenic 40.0%
AGGTTGGATCATAGATCCTT+TGG - chr5_1:46600550-46600569 None:intergenic 40.0%
AAAGGATCTATGATCCAACC+TGG + chr5_1:46600549-46600568 Msa0733360:CDS 40.0%
TGAGCTAGATGAAAACGGAA+AGG + chr5_1:46600595-46600614 Msa0733360:CDS 40.0%
ATTACACAGATAGATGCCTC+AGG + chr5_1:46600809-46600828 Msa0733360:intron 40.0%
AGTGGTTCTCATGAATATGC+AGG - chr5_1:46600845-46600864 None:intergenic 40.0%
TTCATGAGAACCACTATGTG+TGG + chr5_1:46600850-46600869 Msa0733360:intron 40.0%
ATGGTTAAGTGCCTTCTTTG+TGG + chr5_1:46600879-46600898 Msa0733360:intron 40.0%
TGGTTAAGTGCCTTCTTTGT+GGG + chr5_1:46600880-46600899 Msa0733360:intron 40.0%
TAAAGTCTTGCATCTAACGG+GGG - chr5_1:46601417-46601436 None:intergenic 40.0%
GTAAAGTCTTGCATCTAACG+GGG - chr5_1:46601418-46601437 None:intergenic 40.0%
!! TTCTTTGAGATGCATCAGTG+AGG - chr5_1:46601504-46601523 None:intergenic 40.0%
ATCACTACTGCAGCTTTACA+TGG - chr5_1:46601587-46601606 None:intergenic 40.0%
!!! TGCGTGAGTTGTTATTTTGC+TGG - chr5_1:46601619-46601638 None:intergenic 40.0%
! CACGTCTTAAATCTGAAGTG+TGG - chr5_1:46601752-46601771 None:intergenic 40.0%
!! TTACTTGTGTGACGGACAAT+TGG + chr5_1:46601884-46601903 Msa0733360:intron 40.0%
AGTTAATGTTAGCATGTGCG+CGG + chr5_1:46601973-46601992 Msa0733360:intron 40.0%
TGCCCTTTGCAAACAACATA+AGG + chr5_1:46602090-46602109 Msa0733360:intron 40.0%
! ACATAAGGAAACAAGGGTGT+AGG + chr5_1:46602105-46602124 Msa0733360:intron 40.0%
GAACTCCATTAAACTTCCCT+AGG + chr5_1:46602130-46602149 Msa0733360:intron 40.0%
CAACTCCTAGGGAAGTTTAA+TGG - chr5_1:46602138-46602157 None:intergenic 40.0%
AATTCCCTTTGCAACTCCTA+GGG - chr5_1:46602149-46602168 None:intergenic 40.0%
! CAAATTTTGAACCTCCTGTG+TGG - chr5_1:46602180-46602199 None:intergenic 40.0%
CTCATAACACTAGAACCTGA+TGG + chr5_1:46602229-46602248 Msa0733360:CDS 40.0%
TCAACCATGTCAAGATCCAA+CGG + chr5_1:46602295-46602314 Msa0733360:CDS 40.0%
ATTCAGTTACTTCTTGAGCG+TGG - chr5_1:46602324-46602343 None:intergenic 40.0%
GTAAACATCACTCTTCTGAG+TGG - chr5_1:46602359-46602378 None:intergenic 40.0%
TTGACATGGTTGATCTTCCA+AGG + chr5_1:46602443-46602462 Msa0733360:CDS 40.0%
! TTGATCTTCCAAGGTGGATT+AGG + chr5_1:46602452-46602471 Msa0733360:CDS 40.0%
TTCAATGAGGAGATGATGAG+AGG + chr5_1:46602508-46602527 Msa0733360:CDS 40.0%
!! TGTATTGGCTTGTGTGTCAA+AGG + chr5_1:46602573-46602592 Msa0733360:CDS 40.0%
CTAACAACTTCGTCCATTGT+TGG - chr5_1:46602613-46602632 None:intergenic 40.0%
GGTTATGACGACGATGATGA+TGG - chr5_1:46598403-46598422 None:intergenic 45.0%
!!! ATCTCTTGTTTTGGAGCTGC+AGG + chr5_1:46598752-46598771 Msa0733360:five_prime_UTR 45.0%
!!! TTGTTTTGGAGCTGCAGGAA+AGG + chr5_1:46598757-46598776 Msa0733360:five_prime_UTR 45.0%
CTGCAGGAAAGGTGAAATTG+TGG + chr5_1:46598768-46598787 Msa0733360:five_prime_UTR 45.0%
! TTTCGAGGATGGCACTGTTT+TGG + chr5_1:46599181-46599200 Msa0733360:five_prime_UTR 45.0%
! TTCGAGGATGGCACTGTTTT+GGG + chr5_1:46599182-46599201 Msa0733360:five_prime_UTR 45.0%
ACATATGCGAAGTGAGAAGG+TGG + chr5_1:46599224-46599243 Msa0733360:five_prime_UTR 45.0%
TGAGAAGGTGGTTCCTGATT+TGG + chr5_1:46599236-46599255 Msa0733360:five_prime_UTR 45.0%
GCTTACTTGGATAGAAGGCT+TGG + chr5_1:46599282-46599301 Msa0733360:five_prime_UTR 45.0%
ACTTGGATAGAAGGCTTGGA+AGG + chr5_1:46599286-46599305 Msa0733360:five_prime_UTR 45.0%
TGACTTTCACTTGAGTTCGG+AGG + chr5_1:46599398-46599417 Msa0733360:five_prime_UTR 45.0%
!! GGCAAGTAGGTTTGGTCTTA+AGG + chr5_1:46599818-46599837 Msa0733360:five_prime_UTR 45.0%
ACAGTTTCAGATCCCAACTG+AGG + chr5_1:46599894-46599913 Msa0733360:five_prime_UTR 45.0%
ATACTCACAGCTCCTCAGTT+GGG - chr5_1:46599909-46599928 None:intergenic 45.0%
AATACTCACAGCTCCTCAGT+TGG - chr5_1:46599910-46599929 None:intergenic 45.0%
GAGGAGCTGTGAGTATTTGA+TGG + chr5_1:46599913-46599932 Msa0733360:five_prime_UTR 45.0%
AAGAGAGGCCAAGCAATTTC+AGG + chr5_1:46600000-46600019 Msa0733360:five_prime_UTR 45.0%
TCAGGAAAACCAAGAGAAGG+AGG + chr5_1:46600018-46600037 Msa0733360:five_prime_UTR 45.0%
! ACTAGTTCTCCTCCTTCTCT+TGG - chr5_1:46600030-46600049 None:intergenic 45.0%
CAGACAGATTCTGGCAACTT+CGG + chr5_1:46600088-46600107 Msa0733360:five_prime_UTR 45.0%
!! CAGATACAAAAGGCTTGCTG+AGG + chr5_1:46600192-46600211 Msa0733360:five_prime_UTR 45.0%
CCAAAGATTTCAAGGGCCAA+TGG - chr5_1:46600343-46600362 None:intergenic 45.0%
CCATTGGCCCTTGAAATCTT+TGG + chr5_1:46600340-46600359 Msa0733360:five_prime_UTR 45.0%
TTGGCCCTTGAAATCTTTGG+TGG + chr5_1:46600343-46600362 Msa0733360:five_prime_UTR 45.0%
TGAAGACGAGTCCTCAATCA+AGG + chr5_1:46600484-46600503 Msa0733360:five_prime_UTR 45.0%
GGATGTTTCCTGAAGACCAA+AGG + chr5_1:46600531-46600550 Msa0733360:CDS 45.0%
GATCTATGATCCAACCTGGA+TGG + chr5_1:46600553-46600572 Msa0733360:CDS 45.0%
CCATGAACAACCACACATAG+TGG - chr5_1:46600863-46600882 None:intergenic 45.0%
CCACTATGTGTGGTTGTTCA+TGG + chr5_1:46600860-46600879 Msa0733360:intron 45.0%
CTGTTGTGGACATCCTTCAT+TGG - chr5_1:46601177-46601196 None:intergenic 45.0%
CAATGAAGGATGTCCACAAC+AGG + chr5_1:46601175-46601194 Msa0733360:intron 45.0%
AAACAAGTGAGACGGGAGAT+GGG - chr5_1:46601327-46601346 None:intergenic 45.0%
AAAACAAGTGAGACGGGAGA+TGG - chr5_1:46601328-46601347 None:intergenic 45.0%
! GTGTGGGTACCGTATATGAT+TGG - chr5_1:46601735-46601754 None:intergenic 45.0%
GTTAATGTTAGCATGTGCGC+GGG + chr5_1:46601974-46601993 Msa0733360:intron 45.0%
AACTTCCCTAGGAGTTGCAA+AGG + chr5_1:46602141-46602160 Msa0733360:intron 45.0%
ACTTCCCTAGGAGTTGCAAA+GGG + chr5_1:46602142-46602161 Msa0733360:intron 45.0%
CAATTCCCTTTGCAACTCCT+AGG - chr5_1:46602150-46602169 None:intergenic 45.0%
! TTTTGAACCTCCTGTGTGGA+TGG - chr5_1:46602176-46602195 None:intergenic 45.0%
ACATCAGTGATGCAACCATC+AGG - chr5_1:46602247-46602266 None:intergenic 45.0%
GATGGTTGCATCACTGATGT+TGG + chr5_1:46602247-46602266 Msa0733360:CDS 45.0%
!! GGTTGATGAGGTGTTCACAA+GGG - chr5_1:46602281-46602300 None:intergenic 45.0%
!! TGGTTGATGAGGTGTTCACA+AGG - chr5_1:46602282-46602301 None:intergenic 45.0%
! GGATCTTGACATGGTTGATG+AGG - chr5_1:46602293-46602312 None:intergenic 45.0%
GTATCCGTTGGATCTTGACA+TGG - chr5_1:46602302-46602321 None:intergenic 45.0%
ACATGGTTGATCTTCCAAGG+TGG + chr5_1:46602446-46602465 Msa0733360:CDS 45.0%
! GATTAGGTCTGTGGTTTGTG+AGG + chr5_1:46602468-46602487 Msa0733360:CDS 45.0%
! TGTGGTTTGTGAGGAATGGA+CGG + chr5_1:46602477-46602496 Msa0733360:CDS 45.0%
! GACGGCTGAAGTTTTCAATG+AGG + chr5_1:46602495-46602514 Msa0733360:CDS 45.0%
!! ATTGGCTTGTGTGTCAAAGG+TGG + chr5_1:46602576-46602595 Msa0733360:CDS 45.0%
TGTCAAAGGTGGAAGGTAAC+AGG + chr5_1:46602587-46602606 Msa0733360:CDS 45.0%
!!! AAATTATTTTATAATTGATT+TGG + chr5_1:46601682-46601701 Msa0733360:intron 5.0%
!!! AATTATTTTATAATTGATTT+GGG + chr5_1:46601683-46601702 Msa0733360:intron 5.0%
!! CGATGATGATGGGGTTGTTG+TGG - chr5_1:46598392-46598411 None:intergenic 50.0%
GGAGAATGTGATTAGGGCGA+TGG + chr5_1:46598939-46598958 Msa0733360:five_prime_UTR 50.0%
GTGATTAGGGCGATGGCTTA+TGG + chr5_1:46598946-46598965 Msa0733360:five_prime_UTR 50.0%
! TTCGCGCTTTGACGTTTTCG+AGG + chr5_1:46599166-46599185 Msa0733360:five_prime_UTR 50.0%
!! CGCTTTGACGTTTTCGAGGA+TGG + chr5_1:46599170-46599189 Msa0733360:five_prime_UTR 50.0%
TGATTGTCCGCGGTTGTTGA+CGG + chr5_1:46599344-46599363 Msa0733360:five_prime_UTR 50.0%
GACGGATCCGTTTGTGTTTG+AGG + chr5_1:46599362-46599381 Msa0733360:five_prime_UTR 50.0%
!!! CTTGAGTTCGGAGGCGTTTT+TGG + chr5_1:46599407-46599426 Msa0733360:five_prime_UTR 50.0%
AGACCAAACCTACTTGCCTG+TGG - chr5_1:46599816-46599835 None:intergenic 50.0%
AGGTTGTGCCAGAGAAAGAG+AGG + chr5_1:46599985-46600004 Msa0733360:five_prime_UTR 50.0%
TTGCTTGGCCTCTCTTTCTC+TGG - chr5_1:46599996-46600015 None:intergenic 50.0%
! TCTGGTCTATGGAAGTGTGC+AGG + chr5_1:46600159-46600178 Msa0733360:five_prime_UTR 50.0%
GTTCAGTGCTTGCTCACCAT+TGG + chr5_1:46600324-46600343 Msa0733360:five_prime_UTR 50.0%
! TCTCAGCAAGCAGCCTTTTG+TGG + chr5_1:46600369-46600388 Msa0733360:five_prime_UTR 50.0%
AGGACTTACTTAGTCGCCTC+CGG + chr5_1:46600443-46600462 Msa0733360:five_prime_UTR 50.0%
GGTCTTCAGGAAACATCCCT+AGG - chr5_1:46600529-46600548 None:intergenic 50.0%
TTCAGCGCAAATGTCCATCC+AGG - chr5_1:46600570-46600589 None:intergenic 50.0%
TGCAGGTCAACAATGTCCTG+AGG - chr5_1:46600828-46600847 None:intergenic 50.0%
CTTCGTGAAGTGACCTGTTG+TGG - chr5_1:46601191-46601210 None:intergenic 50.0%
ACAGGTCACTTCACGAAGTC+CGG + chr5_1:46601193-46601212 Msa0733360:intron 50.0%
TCCATGTCACGACCCAAACT+CGG - chr5_1:46602007-46602026 None:intergenic 50.0%
GGAATTGCTTCCATCCACAC+AGG + chr5_1:46602163-46602182 Msa0733360:CDS 50.0%
ATTGCTTCCATCCACACAGG+AGG + chr5_1:46602166-46602185 Msa0733360:CDS 50.0%
TTCTTGAGCGTGGTATCCGT+TGG - chr5_1:46602314-46602333 None:intergenic 50.0%
!! TCCAAGGTGGATTAGGTCTG+TGG + chr5_1:46602459-46602478 Msa0733360:CDS 50.0%
ACCACAGACCTAATCCACCT+TGG - chr5_1:46602463-46602482 None:intergenic 50.0%
! GGTCTGTGGTTTGTGAGGAA+TGG + chr5_1:46602473-46602492 Msa0733360:CDS 50.0%
GCTTGTGTGTCAAAGGTGGA+AGG + chr5_1:46602580-46602599 Msa0733360:CDS 50.0%
GGAAGGTAACAGGCCAACAA+TGG + chr5_1:46602597-46602616 Msa0733360:CDS 50.0%
TGGACGTGGATGATTGTCCG+CGG + chr5_1:46599334-46599353 Msa0733360:five_prime_UTR 55.0%
AACGGATCCGTCAACAACCG+CGG - chr5_1:46599354-46599373 None:intergenic 55.0%
GCACCACAGGCAAGTAGGTT+TGG + chr5_1:46599810-46599829 Msa0733360:five_prime_UTR 55.0%
! GGAAGTGTGCAGGAGCATAG+TGG + chr5_1:46600169-46600188 Msa0733360:five_prime_UTR 55.0%
GCGCAAATGTCCATCCAGGT+TGG - chr5_1:46600566-46600585 None:intergenic 55.0%
CAGGTCACTTCACGAAGTCC+GGG + chr5_1:46601194-46601213 Msa0733360:intron 55.0%
! GCGGGTTATGACCCGAGTTT+GGG + chr5_1:46601992-46602011 Msa0733360:intron 55.0%
CCATGTCACGACCCAAACTC+GGG - chr5_1:46602006-46602025 None:intergenic 55.0%
TGTGGTGCAGCACCAGGTGT+AGG - chr5_1:46599798-46599817 None:intergenic 60.0%
!! TACACCTGGTGCTGCACCAC+AGG + chr5_1:46599797-46599816 Msa0733360:five_prime_UTR 60.0%
GTGCTGCACCACAGGCAAGT+AGG + chr5_1:46599805-46599824 Msa0733360:five_prime_UTR 60.0%
! CGCGGGTTATGACCCGAGTT+TGG + chr5_1:46601991-46602010 Msa0733360:intron 60.0%
CCCGAGTTTGGGTCGTGACA+TGG + chr5_1:46602003-46602022 Msa0733360:intron 60.0%
CTTGCCTGTGGTGCAGCACC+AGG - chr5_1:46599804-46599823 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 46598352 46602693 46598352 ID=Msa0733360;Name=Msa0733360
chr5_1 mRNA 46598352 46602693 46598352 ID=Msa0733360-mRNA-1;Parent=Msa0733360;Name=Msa0733360-mRNA-1;_AED=0.32;_eAED=0.32;_QI=2169|0|0.5|1|1|1|2|0|208
chr5_1 exon 46598352 46600616 46598352 ID=Msa0733360-mRNA-1:exon:13285;Parent=Msa0733360-mRNA-1
chr5_1 exon 46602163 46602693 46602163 ID=Msa0733360-mRNA-1:exon:13286;Parent=Msa0733360-mRNA-1
chr5_1 five_prime_UTR 46598352 46600520 46598352 ID=Msa0733360-mRNA-1:five_prime_utr;Parent=Msa0733360-mRNA-1
chr5_1 CDS 46600521 46600616 46600521 ID=Msa0733360-mRNA-1:cds;Parent=Msa0733360-mRNA-1
chr5_1 CDS 46602163 46602693 46602163 ID=Msa0733360-mRNA-1:cds;Parent=Msa0733360-mRNA-1
Gene Sequence

>Msa0733360

ATGGACCTAGGGATGTTTCCTGAAGACCAAAGGATCTATGATCCAACCTGGATGGACATTTGCGCTGAACTGTATGAGCTAGATGAAAACGGAAAGGGAATTGCTTCCATCCACACAGGAGGTTCAAAATTTGTTCATGGAAACAACAAGTTAACCAATGTACTCATAACACTAGAACCTGATGGTTGCATCACTGATGTTGGACTTACTACCCTTGTGAACACCTCATCAACCATGTCAAGATCCAACGGATACCACGCTCAAGAAGTAACTGAATCAAGAAAGATCGCCACTCAGAAGAGTGATGTTTACAACTTTGGTGTACTTCTTCTTGAAATTCTTACAGGAAAGACTCCATTTTATTCTGCTTATGATCTTGACATGGTTGATCTTCCAAGGTGGATTAGGTCTGTGGTTTGTGAGGAATGGACGGCTGAAGTTTTCAATGAGGAGATGATGAGAGGAAGAGAAATTGTTGAAGAGGAGATGGTTGAGATGCTTCAGATTGTATTGGCTTGTGTGTCAAAGGTGGAAGGTAACAGGCCAACAATGGACGAAGTTGTTAGAAACATAGTAGAAATTAGCCAGCCTAAGTTGAAAAAAGAGTACTACATCTTCCGAGTCTGA
Protein sequence

>Msa0733360

MDLGMFPEDQRIYDPTWMDICAELYELDENGKGIASIHTGGSKFVHGNNKLTNVLITLEPDGCITDVGLTTLVNTSSTMSRSNGYHAQEVTESRKIATQKSDVYNFGVLLLEILTGKTPFYSAYDLDMVDLPRWIRSVVCEEWTAEVFNEEMMRGREIVEEEMVEMLQIVLACVSKVEGNRPTMDEVVRNIVEISQPKLKKEYYIFRV*