AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0294590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0294590 MtrunA17_Chr2g0316251 97.411 1352 35 0 1 1352 1 1352 0.0 2740
Msa0294590 MtrunA17_Chr1g0205451 39.748 556 305 10 733 1282 579 1110 2.98e-117 403
Msa0294590 MtrunA17_Chr1g0185491 39.729 443 255 3 732 1166 782 1220 1.85e-98 347
Msa0294590 MtrunA17_Chr5g0430361 35.685 496 296 11 685 1166 571 1057 2.73e-83 296
Msa0294590 MtrunA17_Chr3g0105291 36.029 408 256 5 762 1166 603 1008 8.23e-80 286
Msa0294590 MtrunA17_Chr7g0270101 35.181 415 250 6 761 1166 383 787 6.74e-75 266
Msa0294590 MtrunA17_Chr5g0407211 34.499 429 245 9 762 1166 3 419 2.48e-72 248
Msa0294590 MtrunA17_Chr5g0407251 34.266 429 246 9 762 1166 3 419 3.13e-71 245
Msa0294590 MtrunA17_Chr3g0134811 32.473 465 244 8 761 1166 338 791 1.15e-70 254
Msa0294590 MtrunA17_Chr3g0134821 35.666 443 262 9 741 1170 404 836 3.17e-67 244
Msa0294590 MtrunA17_Chr7g0259981 36.859 312 164 7 861 1166 8 292 1.06e-59 207
Msa0294590 MtrunA17_Chr1g0182481 30.144 418 221 16 797 1164 495 891 6.88e-46 179
Msa0294590 MtrunA17_Chr3g0134851 29.880 415 201 8 784 1166 108 464 1.69e-45 171
Msa0294590 MtrunA17_Chr4g0055731 27.416 445 236 15 738 1167 98 470 1.59e-36 145
Msa0294590 MtrunA17_Chr7g0265211 26.790 433 233 12 798 1164 531 945 1.80e-35 147
Msa0294590 MtrunA17_Chr1g0179841 25.446 448 238 13 791 1166 379 802 6.46e-31 131
Msa0294590 MtrunA17_Chr4g0028111 25.850 441 211 12 794 1137 137 558 1.21e-29 126
Msa0294590 MtrunA17_Chr4g0025251 32.000 250 151 6 934 1166 454 701 1.19e-24 111
Msa0294590 MtrunA17_Chr4g0027811 24.292 424 209 12 794 1166 216 578 1.08e-22 104
Msa0294590 MtrunA17_Chr2g0320451 36.601 153 94 2 1015 1166 873 1023 2.05e-19 95.1
Msa0294590 MtrunA17_Chr2g0320451 28.814 236 101 9 798 984 500 717 6.23e-18 90.1
Msa0294590 MtrunA17_Chr4g0027391 39.759 83 36 2 850 918 387 469 3.56e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0294590 AT3G14980.6 52.007 573 255 4 595 1167 472 1024 0.0 604
Msa0294590 AT3G14980.6 32.921 404 226 10 1 400 7 369 5.86e-43 172
Msa0294590 AT3G14980.1 52.007 573 255 4 595 1167 472 1024 0.0 604
Msa0294590 AT3G14980.1 32.921 404 226 10 1 400 7 369 5.86e-43 172
Msa0294590 AT3G14980.2 52.007 573 255 4 595 1167 472 1024 0.0 604
Msa0294590 AT3G14980.2 32.921 404 226 10 1 400 7 369 5.86e-43 172
Msa0294590 AT3G14980.5 52.007 573 255 4 595 1167 427 979 0.0 603
Msa0294590 AT3G14980.5 35.019 257 160 5 146 400 73 324 6.09e-36 149
Msa0294590 AT3G14980.3 52.007 573 255 4 595 1167 472 1024 0.0 600
Msa0294590 AT3G14980.3 32.921 404 226 10 1 400 7 369 3.93e-43 172
Msa0294590 AT3G14980.4 48.033 483 231 4 595 1077 472 934 8.65e-142 457
Msa0294590 AT3G14980.4 32.921 404 226 10 1 400 7 369 2.34e-43 172
Msa0294590 AT5G36740.5 40.084 474 271 5 701 1170 489 953 2.40e-114 387
Msa0294590 AT5G36740.1 40.084 474 271 5 701 1170 489 953 2.40e-114 387
Msa0294590 AT1G05380.3 42.955 440 240 4 733 1166 491 925 2.12e-112 382
Msa0294590 AT1G05380.1 42.955 440 240 4 733 1166 491 925 2.12e-112 382
Msa0294590 AT1G05380.2 42.955 440 240 4 733 1166 491 925 2.12e-112 382
Msa0294590 AT5G36740.4 39.050 484 272 6 701 1170 336 810 8.35e-111 374
Msa0294590 AT4G14920.3 38.055 473 279 5 730 1193 548 1015 1.05e-104 360
Msa0294590 AT4G14920.2 38.717 452 268 4 730 1177 548 994 2.81e-104 358
Msa0294590 AT4G14920.1 38.717 452 268 4 730 1177 548 994 2.81e-104 358
Msa0294590 AT5G36670.4 36.939 490 278 7 701 1170 489 967 7.24e-101 350
Msa0294590 AT5G36670.5 36.939 490 278 7 701 1170 489 967 7.24e-101 350
Msa0294590 AT5G36670.3 36.000 500 279 8 701 1170 336 824 2.16e-97 337
Msa0294590 AT5G36670.1 36.000 500 279 8 701 1170 489 977 2.08e-96 337
Msa0294590 AT5G36670.2 37.864 412 243 5 701 1108 489 891 1.74e-90 314
Msa0294590 AT5G36740.2 37.864 412 243 5 701 1108 489 891 1.74e-90 314
Msa0294590 AT5G36740.3 37.864 412 243 5 701 1108 489 891 1.74e-90 314
Msa0294590 AT5G58610.4 36.077 413 257 4 760 1166 366 777 2.68e-83 293
Msa0294590 AT5G58610.8 36.077 413 257 4 760 1166 597 1008 2.61e-81 290
Msa0294590 AT5G58610.2 36.077 413 257 4 760 1166 597 1008 2.61e-81 290
Msa0294590 AT5G58610.3 36.077 413 257 4 760 1166 597 1008 2.63e-81 291
Msa0294590 AT5G58610.7 36.077 413 257 4 760 1166 588 999 4.55e-81 290
Msa0294590 AT5G58610.5 36.077 413 257 4 760 1166 588 999 4.62e-81 290
Msa0294590 AT5G58610.1 36.408 412 231 7 760 1166 588 973 1.87e-75 273
Msa0294590 AT5G58610.6 36.408 412 231 7 760 1166 588 973 2.63e-75 273
Msa0294590 AT5G58610.10 35.475 358 224 4 760 1111 597 953 1.95e-68 250
Msa0294590 AT5G58610.9 35.475 358 224 4 760 1111 588 944 3.04e-68 249
Msa0294590 AT5G58610.11 34.675 323 204 4 760 1076 588 909 2.39e-57 216
Msa0294590 AT3G53680.1 28.230 418 238 12 798 1166 427 831 9.92e-46 179
Msa0294590 AT3G53680.2 28.230 418 238 12 798 1166 429 833 1.28e-45 179
Msa0294590 AT2G37520.1 29.099 433 216 14 798 1166 410 815 1.58e-45 178
Msa0294590 AT5G63900.1 33.127 323 191 9 864 1181 253 555 5.45e-42 163
Msa0294590 AT2G27980.1 27.523 436 234 11 798 1166 637 1057 4.18e-37 152
Msa0294590 AT2G36720.1 26.157 432 241 13 798 1166 557 973 7.00e-34 142
Msa0294590 AT2G36720.2 26.157 432 241 13 798 1166 557 973 7.00e-34 142
Msa0294590 AT5G22760.2 40.000 80 43 2 844 921 393 469 2.77e-11 68.9
Msa0294590 AT5G22760.1 40.000 80 43 2 844 921 393 469 6.04e-11 68.2
Msa0294590 AT5G22760.3 40.000 80 43 2 844 921 118 194 6.65e-11 67.8

Find 338 sgRNAs with CRISPR-Local

Find 665 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCTATGTTCAGATTT+TGG 0.097676 2_3:-46586992 Msa0294590:five_prime_UTR
TCTTACAAGCTCTGGAAATT+TGG 0.177960 2_3:-46584086 Msa0294590:CDS
TGTAAATCTAAAACAGAAAA+TGG 0.178593 2_3:-46585102 Msa0294590:CDS
ACAGTTCACCCACCAAAATT+AGG 0.181806 2_3:+46586954 None:intergenic
CGATGATTCTCTACAGTTAT+AGG 0.197520 2_3:-46586356 Msa0294590:intron
ATTTCGAGAAACCCTAATTT+TGG 0.200841 2_3:-46586966 Msa0294590:five_prime_UTR
TTGAAATATGAAGTGAATTA+AGG 0.204943 2_3:-46586501 Msa0294590:five_prime_UTR
TAGATCTAATTCAGATGTTT+TGG 0.230794 2_3:-46585313 Msa0294590:CDS
TGTATTGCATACTGCCTTTA+GGG 0.232535 2_3:+46579809 None:intergenic
TCTTTGTTGGCACTTGTTCT+TGG 0.233184 2_3:+46577880 None:intergenic
GATTTACCTCGGATTATCTT+TGG 0.239558 2_3:+46583557 None:intergenic
CACTTCACAGCTTCTATTAC+TGG 0.240006 2_3:+46585724 None:intergenic
GTATAGTTGCTTCATCTAAA+AGG 0.248528 2_3:-46587226 Msa0294590:five_prime_UTR
GCTCTTAATATACACGTTAT+TGG 0.248661 2_3:-46577638 Msa0294590:three_prime_UTR
CTTACAAACAATACCGTCTT+TGG 0.249129 2_3:+46583295 None:intergenic
AGTCAGAGGCGTGTAATTTC+TGG 0.259875 2_3:-46585585 Msa0294590:CDS
TTGTATTGCATACTGCCTTT+AGG 0.260682 2_3:+46579808 None:intergenic
CATCATAGAAAACCGATTAA+TGG 0.261943 2_3:-46584206 Msa0294590:CDS
TTCATTCATGCATGTAGATT+TGG 0.263833 2_3:-46586829 Msa0294590:five_prime_UTR
GCCTGTTTGCCGAGCTCTCC+TGG 0.266619 2_3:+46585028 None:intergenic
CTTCGACATACATATCTTCT+TGG 0.269910 2_3:+46584242 None:intergenic
TACTTACAGACACCTCTTTC+GGG 0.273744 2_3:+46585073 None:intergenic
AGAGAGAGAAACTCAGAAAA+AGG 0.274400 2_3:-46587133 Msa0294590:five_prime_UTR
GTTCGTCAACCAGGGCATTT+TGG 0.276144 2_3:-46585829 Msa0294590:five_prime_UTR
GGCTTATCAATGGTGGATTA+TGG 0.282618 2_3:-46584566 Msa0294590:CDS
TGCGGGAATTTACAAAAGTT+TGG 0.284793 2_3:-46584744 Msa0294590:CDS
CAGAATTATCTTTAGGGTTT+CGG 0.291247 2_3:+46583339 None:intergenic
TTGTCGGATTTGTGGAAATT+TGG 0.293006 2_3:-46582249 Msa0294590:CDS
TCTCAAACCCCTTGATTTGC+CGG 0.296305 2_3:+46583523 None:intergenic
CTTCCCATGTGATTTGCATT+TGG 0.297624 2_3:+46587171 None:intergenic
AGGTTGGAAATTACTACTTT+TGG 0.297926 2_3:+46585276 None:intergenic
TAGTGACAGAATTATCTTTA+GGG 0.301426 2_3:+46583333 None:intergenic
TTAGTGACAGAATTATCTTT+AGG 0.306142 2_3:+46583332 None:intergenic
AGGCATTTCCTCAGTTCTTA+AGG 0.307406 2_3:+46584957 None:intergenic
AGCAGATATTTCTGTGGTTC+TGG 0.307947 2_3:+46584309 None:intergenic
AGTAAAGGGGTGATATAATT+AGG 0.307958 2_3:-46577557 Msa0294590:three_prime_UTR
ATTTGTTTAATTTGAAGTTT+TGG 0.308888 2_3:-46586762 Msa0294590:five_prime_UTR
GGAAGCATCAACGGCCTTCT+AGG 0.311431 2_3:-46584810 Msa0294590:CDS
AGAAAGCTTAAAAGCTATAA+AGG 0.312941 2_3:-46583503 Msa0294590:CDS
GGGGATCCTCTTGGTCCAGC+TGG 0.316151 2_3:+46584890 None:intergenic
CTCTTTACCTGCTTGTGCAT+TGG 0.321273 2_3:-46584149 Msa0294590:CDS
AGGGTTTCAATCTTCTAATA+TGG 0.322799 2_3:-46584932 Msa0294590:CDS
GTCAGCAATACTCAAGAATA+AGG 0.324948 2_3:-46583588 Msa0294590:CDS
GGTATCAGCCATTCCGGATT+TGG 0.327959 2_3:-46578608 Msa0294590:CDS
AGTTTCTAGTAAGGGTAAAA+TGG 0.334455 2_3:-46584458 Msa0294590:CDS
TTACTTACAGACACCTCTTT+CGG 0.336236 2_3:+46585072 None:intergenic
TGCACTAGTCAGCAACAAAA+TGG 0.336556 2_3:-46585697 Msa0294590:exon
CAGTTCACCCACCAAAATTA+GGG 0.345255 2_3:+46586955 None:intergenic
ACGATGTCAGGATGGTCTAT+TGG 0.345468 2_3:-46584832 Msa0294590:CDS
TGTTGAAGAGTCGCAGAAAA+TGG 0.348382 2_3:+46584336 None:intergenic
TTCTTCACAACAGTGATTGA+TGG 0.348517 2_3:+46584991 None:intergenic
TCTTTACCTGCTTGTGCATT+GGG 0.350138 2_3:-46584148 Msa0294590:CDS
GAGGACAAGCATATCAATAT+AGG 0.351730 2_3:-46577829 Msa0294590:CDS
ATTTACCTCGGATTATCTTT+GGG 0.353678 2_3:+46583558 None:intergenic
TTTGATGTTCTTACAAGCTC+TGG 0.353731 2_3:-46584094 Msa0294590:CDS
TCCACATTGTTTCCTTCAAA+AGG 0.353806 2_3:+46577907 None:intergenic
GTCAGTGAGCAAAAGTAGTA+TGG 0.356687 2_3:-46584179 Msa0294590:CDS
CTAGCCGTTGAAATTGCATT+AGG 0.356729 2_3:-46577982 Msa0294590:CDS
GAGACTTGGACCAAGGGCTT+TGG 0.358747 2_3:-46578583 Msa0294590:CDS
ATCTTCAATATGGCATCTAT+TGG 0.358806 2_3:+46583625 None:intergenic
GGCATTTCCTCAGTTCTTAA+GGG 0.364655 2_3:+46584958 None:intergenic
TGCTCAGTGGTTTGCCCTAA+AGG 0.365394 2_3:-46579823 Msa0294590:CDS
GCATGTAGATTTGGAGAAAC+TGG 0.366163 2_3:-46586820 Msa0294590:five_prime_UTR
CCTGGCTTGTTTGTCCGCTC+AGG 0.376452 2_3:-46583009 Msa0294590:intron
AAAGCTATAAAGGCCGTTGC+AGG 0.380573 2_3:-46583493 Msa0294590:CDS
ATAGATCGTCATCTTCAATA+TGG 0.381281 2_3:+46583615 None:intergenic
TCACTGACATTTCCATTAAT+CGG 0.381706 2_3:+46584194 None:intergenic
CACTTTGCCTCCTTCAAGCT+TGG 0.382263 2_3:-46583169 Msa0294590:CDS
CGATGTCAGGATGGTCTATT+GGG 0.382324 2_3:-46584831 Msa0294590:CDS
GTTATACCACAGTGACATAC+TGG 0.382734 2_3:-46583837 Msa0294590:CDS
GACTCCATCCACCGCCTAGA+AGG 0.382818 2_3:+46584796 None:intergenic
ATTTAGTCTTTGTTGTTGAT+AGG 0.383115 2_3:-46586537 Msa0294590:five_prime_UTR
TGAAATATGAAGTGAATTAA+GGG 0.383209 2_3:-46586500 Msa0294590:five_prime_UTR
CCCCTCTTCCTCACTGCATT+CGG 0.383952 2_3:+46583979 None:intergenic
AGGAACAAGAAGAAGTTATC+AGG 0.389536 2_3:-46583707 Msa0294590:CDS
TCACATGGGAAGAAAGGATA+TGG 0.391692 2_3:-46587160 Msa0294590:five_prime_UTR
GGATTCATGTTCAAGGTTGA+TGG 0.394367 2_3:+46585560 None:intergenic
AGATTCAGTGCCATCTTTGT+TGG 0.396173 2_3:+46577867 None:intergenic
GCCAACATAGCAGCGGTCTC+TGG 0.399885 2_3:+46584586 None:intergenic
AACAAAGATGGCACTGAATC+TGG 0.401221 2_3:-46577865 Msa0294590:CDS
CATTTGGATTTGTCTATTTG+TGG 0.402041 2_3:+46587187 None:intergenic
TTCTCCAAGGCTGAATCAAC+TGG 0.404150 2_3:+46584397 None:intergenic
TGCAAATCACATGGGAAGAA+AGG 0.404378 2_3:-46587166 Msa0294590:five_prime_UTR
GATGGGAAGAAGTATTATCT+TGG 0.404793 2_3:-46583428 Msa0294590:CDS
GCTTGTGGTATCAGCCATTC+CGG 0.405683 2_3:-46578614 Msa0294590:CDS
TCACTGTCGGCCCTATTGTC+TGG 0.406621 2_3:+46578027 None:intergenic
ATCTTTCTTCTTGCCATACA+AGG 0.409056 2_3:+46578474 None:intergenic
CTATCTATTGAAGCATAACT+TGG 0.416563 2_3:-46585169 Msa0294590:CDS
CTCAAATTCATTGTCCCAGC+TGG 0.416591 2_3:-46584905 Msa0294590:CDS
TTGTAGTTTAGTTTCTAGTA+AGG 0.416653 2_3:-46584467 Msa0294590:CDS
AACTGCACTTGTCGGATTTG+TGG 0.417174 2_3:-46582257 Msa0294590:CDS
AGTACATGGTCTTCCTCTAA+TGG 0.417552 2_3:-46583920 Msa0294590:CDS
CCCAGGAGAGCTCGGCAAAC+AGG 0.418100 2_3:-46585029 Msa0294590:CDS
GCATTCCAATGAGACTGCTC+TGG 0.418538 2_3:-46585430 Msa0294590:CDS
TTAGAAGATTGAAACCCTTC+AGG 0.419051 2_3:+46584937 None:intergenic
GTAATGAAAACTCGGTCATA+TGG 0.420439 2_3:-46585506 Msa0294590:CDS
GCCGAGCTCTCCTGGGATAC+AGG 0.421895 2_3:+46585036 None:intergenic
GGAATTCGTTGTAGCATTGT+TGG 0.422184 2_3:-46587069 Msa0294590:five_prime_UTR
AACTCTGCAAATTAGAGAAA+TGG 0.422254 2_3:-46577667 Msa0294590:exon
CCACATTGTTTCCTTCAAAA+GGG 0.424436 2_3:+46577908 None:intergenic
ATATTCTTATGTAGATTCTC+AGG 0.425865 2_3:-46585901 Msa0294590:five_prime_UTR
TAATGGAGGGAAGCACAATA+TGG 0.426611 2_3:-46583450 Msa0294590:CDS
CAGGAGCTAGCTATTTATAA+TGG 0.427033 2_3:-46585766 Msa0294590:five_prime_UTR
AGGAGATCCCCGACGGCAAC+TGG 0.428274 2_3:-46582289 Msa0294590:CDS
TATAGTTGCTTCATCTAAAA+GGG 0.428637 2_3:-46587225 Msa0294590:five_prime_UTR
CAGTAACAACCTCTAGTTGT+AGG 0.430117 2_3:+46586469 None:intergenic
TTATGCGATGATAACTTTGA+AGG 0.431195 2_3:-46585669 Msa0294590:CDS
ATGCAGTACCAGTTGCCGTC+GGG 0.432290 2_3:+46582281 None:intergenic
TTCCGGATTTGGTGGAGACT+TGG 0.432477 2_3:-46578597 Msa0294590:CDS
GCATGAAGATTTATCAATGT+TGG 0.433812 2_3:-46586585 Msa0294590:five_prime_UTR
CGAGGCGTCGGCACATTCCT+TGG 0.436112 2_3:+46579119 None:intergenic
CAAAAGAGGAAGCACTTGAA+TGG 0.439006 2_3:+46584113 None:intergenic
GAGCTAAATCCGGCAAATCA+AGG 0.439675 2_3:-46583532 Msa0294590:CDS
ACTGAGCAGAATGAACCTTT+TGG 0.444091 2_3:+46579838 None:intergenic
ATGGGAAGAAGTATTATCTT+GGG 0.444935 2_3:-46583427 Msa0294590:CDS
TAATATCTGTAGCATCTATC+AGG 0.446238 2_3:-46579462 Msa0294590:intron
TGAATTTGTTTACAGTATGC+AGG 0.447480 2_3:-46585785 Msa0294590:five_prime_UTR
GGGAAAGGACTCTCTTGTCC+TGG 0.450075 2_3:-46583406 Msa0294590:CDS
TAACTAGCCCAACCTGAGAT+TGG 0.450900 2_3:+46579913 None:intergenic
ACAAAAGTTTGGAGATTATG+TGG 0.451043 2_3:-46584733 Msa0294590:CDS
GTCCAAGTCTCCACCAAATC+CGG 0.451097 2_3:+46578595 None:intergenic
ACACCCCAGAGCAGTCTCAT+TGG 0.454881 2_3:+46585425 None:intergenic
GGAGAAAGAGATAAACTAGA+AGG 0.459847 2_3:-46581695 Msa0294590:CDS
GAAAGGTCGGTGCTCTGAAA+AGG 0.461188 2_3:-46584513 Msa0294590:CDS
AGCTAGCTATTTATAATGGT+GGG 0.463063 2_3:-46585762 Msa0294590:five_prime_UTR
TCGTTAATTTCTAGAGGAGC+TGG 0.464051 2_3:-46586858 Msa0294590:five_prime_UTR
ATAAGCACGCATCAGAAAAT+CGG 0.464398 2_3:-46584003 Msa0294590:CDS
CCTCCATTACAAGGATTCCT+TGG 0.464662 2_3:+46583464 None:intergenic
AAATGTATAACTACTACAAA+AGG 0.468270 2_3:+46584541 None:intergenic
AGCTGTTGCCCTTACCATCA+TGG 0.470761 2_3:-46579781 Msa0294590:CDS
TTGTGCTTCCCTCCATTACA+AGG 0.472119 2_3:+46583455 None:intergenic
GGGATCAACTATTACTGATC+AGG 0.473332 2_3:-46583816 Msa0294590:CDS
AATCATTGCCGCTAGATGTT+GGG 0.474736 2_3:-46578113 Msa0294590:CDS
AGCTAAATCCGGCAAATCAA+GGG 0.474850 2_3:-46583531 Msa0294590:CDS
TGAAGGAGGCAAAGTGTAAA+GGG 0.475613 2_3:+46583176 None:intergenic
TACTTATTTGCAGAGTGCAC+GGG 0.476339 2_3:-46579192 Msa0294590:intron
TAATATTGGTCCATTCCTTA+CGG 0.477055 2_3:+46584668 None:intergenic
AAGCTCTGGAAATTTGGACT+TGG 0.477689 2_3:-46584080 Msa0294590:CDS
GAATCATTGCCGCTAGATGT+TGG 0.478167 2_3:-46578114 Msa0294590:CDS
GAATTCGTTGTAGCATTGTT+GGG 0.479396 2_3:-46587068 Msa0294590:five_prime_UTR
CATTCCAATGAGACTGCTCT+GGG 0.482728 2_3:-46585429 Msa0294590:CDS
GAAAGAGGTGTCTGTAAGTA+AGG 0.483460 2_3:-46585070 Msa0294590:CDS
GAATCTGAGTTGGGTAGGGT+AGG 0.483807 2_3:-46586909 Msa0294590:five_prime_UTR
ATCTCTGCTGATTTCACTGT+CGG 0.484434 2_3:+46578014 None:intergenic
AACACTCCTCCATGATGGTA+AGG 0.484466 2_3:+46579772 None:intergenic
TCAGAGTTCAAGATTCATGC+TGG 0.484938 2_3:-46583248 Msa0294590:CDS
CACGATATGAAACTGCAGTA+AGG 0.485144 2_3:+46584864 None:intergenic
CTTGAGAATCTGAGTTGGGT+AGG 0.485842 2_3:-46586914 Msa0294590:five_prime_UTR
TGTAGTTTAGTTTCTAGTAA+GGG 0.486687 2_3:-46584466 Msa0294590:CDS
TGCTCCAGTTGATTCAGCCT+TGG 0.488276 2_3:-46584401 Msa0294590:CDS
AAATTTGGTCATTGATAAAG+AGG 0.488780 2_3:-46582234 Msa0294590:CDS
TTTGGTGGAGACTTGGACCA+AGG 0.489098 2_3:-46578590 Msa0294590:CDS
ATGAAACTGCAGTAAGGGAC+GGG 0.490288 2_3:+46584870 None:intergenic
TCCTGTATCCCAGGAGAGCT+CGG 0.492443 2_3:-46585037 Msa0294590:CDS
ATTCAGCTGACCAAGCTTGA+AGG 0.493841 2_3:+46583159 None:intergenic
GTGCAGTTGCTTACGATGTC+AGG 0.495290 2_3:-46584844 Msa0294590:CDS
AAAGGTCGGTGCTCTGAAAA+GGG 0.495460 2_3:-46584512 Msa0294590:CDS
TGAGTTGGGTAGGGTAGGAT+TGG 0.495468 2_3:-46586904 Msa0294590:five_prime_UTR
TCTTCACAAGTTAAACTCTC+TGG 0.495860 2_3:+46585399 None:intergenic
GCCGTTGCAGGTTGCTGCCA+AGG 0.496197 2_3:-46583481 Msa0294590:CDS
ATTTCTTGAGAATCTGAGTT+GGG 0.497647 2_3:-46586918 Msa0294590:five_prime_UTR
GTCCGAATGCAGTGAGGAAG+AGG 0.497959 2_3:-46583981 Msa0294590:CDS
ACAAATAAAATCACGTCGTA+AGG 0.498256 2_3:+46585877 None:intergenic
AAAAGAGGAAGCACTTGAAT+GGG 0.498815 2_3:+46584114 None:intergenic
AAATTGCTGATGGCTTCGCC+TGG 0.498911 2_3:-46579887 Msa0294590:CDS
TTTCACGCTAGCTAATGTTT+AGG 0.501460 2_3:+46577534 None:intergenic
TATCAATATAGGTGAAGTAA+AGG 0.501876 2_3:-46577818 Msa0294590:CDS
GTACTCTCCAATCTCAGGTT+GGG 0.502494 2_3:-46579920 Msa0294590:CDS
AGAAATGAAGTTCGTCAACC+AGG 0.505066 2_3:-46585838 Msa0294590:five_prime_UTR
GTAAATCTAAAACAGAAAAT+GGG 0.505238 2_3:-46585101 Msa0294590:CDS
TAAAGATAATTCTGTCACTA+AGG 0.505718 2_3:-46583330 Msa0294590:CDS
AAATGCGGAAGAAGTGCAAA+AGG 0.506972 2_3:-46583883 Msa0294590:CDS
AGTCTGTAGTAGCACAAGTC+AGG 0.508599 2_3:+46585256 None:intergenic
GATAATTCTGTCACTAAGGA+TGG 0.508843 2_3:-46583326 Msa0294590:CDS
CTATGTTGGCTTATCAATGG+TGG 0.510809 2_3:-46584573 Msa0294590:CDS
CTAGTTAATCAAATTGCTGA+TGG 0.511889 2_3:-46579897 Msa0294590:CDS
GCCAGAGACCGCTGCTATGT+TGG 0.513514 2_3:-46584587 Msa0294590:CDS
AGGTACCTGCTCTGAAGGAA+TGG 0.513613 2_3:-46578145 Msa0294590:CDS
ACAGAGACAAGTAGGTCTTT+CGG 0.513765 2_3:-46577946 Msa0294590:CDS
TCGTGCGGGATGTGTGGTGA+GGG 0.515173 2_3:-46583074 Msa0294590:CDS
GTAAGGGACGGGGATCCTCT+TGG 0.515414 2_3:+46584881 None:intergenic
TTGAAGGAGGCAAAGTGTAA+AGG 0.516368 2_3:+46583175 None:intergenic
AAGGAGCTGTTTCAGACACT+TGG 0.517459 2_3:-46581676 Msa0294590:CDS
GGGATCCTCTTGGTCCAGCT+GGG 0.517919 2_3:+46584891 None:intergenic
AGGAAAAGTCAAAATCAAGC+TGG 0.520615 2_3:-46583128 Msa0294590:CDS
ATACTGTACTCTCCAATCTC+AGG 0.522025 2_3:-46579925 Msa0294590:CDS
ACATAGCAGCGGTCTCTGGC+TGG 0.522383 2_3:+46584590 None:intergenic
TCAATGCTAGATCTAAGAAC+AGG 0.522573 2_3:-46579744 Msa0294590:CDS
ATGCATACATGATGACCAAA+AGG 0.522770 2_3:-46579853 Msa0294590:CDS
TTTCAGTGCACTCGATAGAT+CGG 0.523254 2_3:+46584633 None:intergenic
AAATGAAATCTGTTCTAACT+TGG 0.524771 2_3:-46577514 Msa0294590:three_prime_UTR
CCTGTTTGCCGAGCTCTCCT+GGG 0.525134 2_3:+46585029 None:intergenic
ACTGCATAAACTGCACTTGT+CGG 0.525485 2_3:-46582265 Msa0294590:CDS
GAAAAGTGCAATGTAACATA+TGG 0.527585 2_3:-46584694 Msa0294590:CDS
ACGGCCTTCTAGGCGGTGGA+TGG 0.528700 2_3:-46584800 Msa0294590:CDS
CACATTGTTTCCTTCAAAAG+GGG 0.530459 2_3:+46577909 None:intergenic
GGAGGGAAGCACAATATGGA+TGG 0.532829 2_3:-46583446 Msa0294590:CDS
CTGCCAAGGAATCCTTGTAA+TGG 0.532876 2_3:-46583467 Msa0294590:CDS
AGTTGCTTCTCCTGTATCCC+AGG 0.534835 2_3:-46585046 Msa0294590:CDS
CATTAATGTCCTCCTCGGGA+TGG 0.535370 2_3:+46585460 None:intergenic
TCATTCTACAAGACACCAAA+GGG 0.537045 2_3:-46584775 Msa0294590:CDS
GTCCTGGTTGATTGAGAATG+AGG 0.538570 2_3:-46583390 Msa0294590:CDS
TATGTCCATTCCTTCAGAGC+AGG 0.538738 2_3:+46578140 None:intergenic
ATTAATGTCCTCCTCGGGAT+GGG 0.538952 2_3:+46585461 None:intergenic
ACAGATGAATCATTCAAAGT+AGG 0.539589 2_3:-46578165 Msa0294590:CDS
AGAACAAGTGCCAACAAAGA+TGG 0.542324 2_3:-46577877 Msa0294590:CDS
TTGAGAATCTGAGTTGGGTA+GGG 0.544766 2_3:-46586913 Msa0294590:five_prime_UTR
GCTTGTAAGAACATCAAAAG+AGG 0.544988 2_3:+46584099 None:intergenic
GGTAAATCTAGAGCTAAATC+CGG 0.545226 2_3:-46583542 Msa0294590:CDS
CATATGGAGGCCGTAAGGAA+TGG 0.545990 2_3:-46584678 Msa0294590:CDS
TTACTTATTTGCAGAGTGCA+CGG 0.546128 2_3:-46579193 Msa0294590:intron
AGATATTTCTGTGGTTCTGG+TGG 0.546610 2_3:+46584312 None:intergenic
AAAGTAGGTACCTGCTCTGA+AGG 0.547142 2_3:-46578150 Msa0294590:CDS
ATCAGCCATTCCGGATTTGG+TGG 0.549329 2_3:-46578605 Msa0294590:CDS
ATCTCCTAATGCAATTTCAA+CGG 0.550717 2_3:+46577978 None:intergenic
TTGGTGGAGACTTGGACCAA+GGG 0.551309 2_3:-46578589 Msa0294590:CDS
GGTCAGCTGAATACAAAGCC+AGG 0.551424 2_3:-46583148 Msa0294590:CDS
TTTCTTCAGCCAAAATGCCC+TGG 0.553764 2_3:+46585820 None:intergenic
GAACTGAGGAAATGCCTGAA+GGG 0.554617 2_3:-46584951 Msa0294590:CDS
CAGAGTTCAAGATTCATGCT+GGG 0.555544 2_3:-46583247 Msa0294590:CDS
TCTGCAAATTAGAGAAATGG+TGG 0.558773 2_3:-46577664 Msa0294590:exon
TGTACTCTCCAATCTCAGGT+TGG 0.558790 2_3:-46579921 Msa0294590:CDS
CAATGCACAAGCAGGTAAAG+AGG 0.560004 2_3:+46584150 None:intergenic
AAGAATCAACAGAGACAAGT+AGG 0.561321 2_3:-46577954 Msa0294590:CDS
TGCTCTGAAAAGGGGAGAAG+AGG 0.562026 2_3:-46584503 Msa0294590:CDS
CTGCTATGTTGGCTTATCAA+TGG 0.562385 2_3:-46584576 Msa0294590:CDS
GATTTCTTGAGAATCTGAGT+TGG 0.563797 2_3:-46586919 Msa0294590:five_prime_UTR
CCAAGGAATCCTTGTAATGG+AGG 0.564973 2_3:-46583464 Msa0294590:CDS
TGTTTGTAAGTGTTGCGGTA+AGG 0.566558 2_3:-46583282 Msa0294590:CDS
TGACTTAGCACCAACTTCGT+TGG 0.567618 2_3:+46578080 None:intergenic
AATTGCATTAATGTCCTCCT+CGG 0.568030 2_3:+46585455 None:intergenic
TCCTTGGCAGCAACCTGCAA+CGG 0.568056 2_3:+46583480 None:intergenic
AACGCAGCTACCAACGAAGT+TGG 0.570716 2_3:-46578090 Msa0294590:CDS
GGTCTATTGGGAAGCATCAA+CGG 0.572145 2_3:-46584819 Msa0294590:CDS
ATCAACGGCCTTCTAGGCGG+TGG 0.573019 2_3:-46584804 Msa0294590:CDS
CACGAAACACTCCTCCATGA+TGG 0.574351 2_3:+46579767 None:intergenic
TGTAGTAGCACAAGTCAGGT+TGG 0.574525 2_3:+46585260 None:intergenic
AAATGGGAACATCCCGAAAG+AGG 0.575647 2_3:-46585085 Msa0294590:CDS
ATTTAGCTCTAGATTTACCT+CGG 0.576101 2_3:+46583546 None:intergenic
CAAGCCAGGTGAAAAGTAGA+GGG 0.577693 2_3:+46583023 None:intergenic
TATGGCAAGAAGAAAGATGA+AGG 0.578063 2_3:-46578469 Msa0294590:intron
GAGCTAGCTATTTATAATGG+TGG 0.578228 2_3:-46585763 Msa0294590:five_prime_UTR
ATTGCATTAATGTCCTCCTC+GGG 0.578795 2_3:+46585456 None:intergenic
TATGCATCTAAGAAGCGTCC+AGG 0.578923 2_3:+46579869 None:intergenic
AAAATACATTGGAAGTAAAG+GGG 0.579770 2_3:-46577570 Msa0294590:three_prime_UTR
AGAAGTATTATCTTGGGGAA+AGG 0.579920 2_3:-46583421 Msa0294590:CDS
TCCGAATGCAGTGAGGAAGA+GGG 0.582823 2_3:-46583980 Msa0294590:CDS
AAATCCAAATGCAAATCACA+TGG 0.583797 2_3:-46587175 Msa0294590:five_prime_UTR
TGCGGGATGTGTGGTGAGGG+AGG 0.583942 2_3:-46583071 Msa0294590:CDS
TGCAGTACCAGTTGCCGTCG+GGG 0.584350 2_3:+46582282 None:intergenic
ACAAGCCAGGTGAAAAGTAG+AGG 0.584375 2_3:+46583022 None:intergenic
CCTCTTCGATTGAGCTCACG+AGG 0.585279 2_3:+46579101 None:intergenic
GCAGATGTTAATATCTGTCA+AGG 0.585666 2_3:-46578644 Msa0294590:intron
GGAAAAGTCAAAATCAAGCT+GGG 0.586183 2_3:-46583127 Msa0294590:CDS
TATGCAGTACCAGTTGCCGT+CGG 0.586857 2_3:+46582280 None:intergenic
ACGATATGAAACTGCAGTAA+GGG 0.588666 2_3:+46584865 None:intergenic
CATAAAAGCAGATATTTCTG+TGG 0.590266 2_3:+46584303 None:intergenic
GTGCTACCCAATGCACAAGC+AGG 0.590716 2_3:+46584142 None:intergenic
GGTATTGTTTGTAAGTGTTG+CGG 0.590744 2_3:-46583287 Msa0294590:CDS
AGAACTGAGGAAATGCCTGA+AGG 0.590783 2_3:-46584952 Msa0294590:CDS
TGCAGTCGGTATCGTCGCCA+AGG 0.591449 2_3:-46579136 Msa0294590:CDS
AGGTATGAATCCAAAGCCCT+TGG 0.593626 2_3:+46578573 None:intergenic
TTCATGAAAAGATTCAAGCA+AGG 0.598939 2_3:+46583209 None:intergenic
ATAGATCACAAGAAATGCCT+CGG 0.601206 2_3:-46581716 Msa0294590:intron
TGTAACATATGGAGGCCGTA+AGG 0.604720 2_3:-46584683 Msa0294590:CDS
CTCTGATTGCAACTTGCAGT+CGG 0.604744 2_3:-46579150 Msa0294590:CDS
AAGAGTCGCAGAAAATGGCT+TGG 0.606421 2_3:+46584341 None:intergenic
TGGCTCTAGTAATGAAAACT+CGG 0.607891 2_3:-46585514 Msa0294590:CDS
GAGGGAAGCACAATATGGAT+GGG 0.610826 2_3:-46583445 Msa0294590:CDS
CAAGGAATCCTTGTAATGGA+GGG 0.611447 2_3:-46583463 Msa0294590:CDS
GATCAGGTGCAGTCACTGAA+TGG 0.612010 2_3:-46583800 Msa0294590:CDS
TCATGAAAAGATTCAAGCAA+GGG 0.612212 2_3:+46583210 None:intergenic
GATTATGTAGTTGACAGTGT+GGG 0.613261 2_3:-46583737 Msa0294590:CDS
CGATTGAGCTCACGAGGCGT+CGG 0.616069 2_3:+46579107 None:intergenic
CGACTGCAAGTTGCAATCAG+AGG 0.616845 2_3:+46579151 None:intergenic
GAAATGAAGTTCGTCAACCA+GGG 0.617580 2_3:-46585837 Msa0294590:five_prime_UTR
CTAGTTTATCTCTTTCTCCG+AGG 0.619907 2_3:+46581699 None:intergenic
CCTGAGCGGACAAACAAGCC+AGG 0.619982 2_3:+46583009 None:intergenic
GTCATTCTACAAGACACCAA+AGG 0.620823 2_3:-46584776 Msa0294590:CDS
TATGAAACTGCAGTAAGGGA+CGG 0.621118 2_3:+46584869 None:intergenic
ACACTCCTCCATGATGGTAA+GGG 0.621140 2_3:+46579773 None:intergenic
TGGGAAGAAGTATTATCTTG+GGG 0.622625 2_3:-46583426 Msa0294590:CDS
AAAAGGTTCATTCTGCTCAG+TGG 0.624275 2_3:-46579836 Msa0294590:CDS
AGAGGGGAGGAAAATCTCAA+TGG 0.625624 2_3:-46583963 Msa0294590:CDS
AAGTGCAATGTAACATATGG+AGG 0.626670 2_3:-46584691 Msa0294590:CDS
TTCGTGCGGGATGTGTGGTG+AGG 0.627451 2_3:-46583075 Msa0294590:CDS
TTCAAGATTTACCCATCCCG+AGG 0.628287 2_3:-46585472 Msa0294590:CDS
TTATACCACAGTGACATACT+GGG 0.629773 2_3:-46583836 Msa0294590:CDS
CTGCAAATTAGAGAAATGGT+GGG 0.630174 2_3:-46577663 Msa0294590:exon
AGTCTCCACCAAATCCGGAA+TGG 0.630263 2_3:+46578600 None:intergenic
AATCAGAGGCATCTCTGCAA+CGG 0.631814 2_3:+46579165 None:intergenic
CCTCGTGAGCTCAATCGAAG+AGG 0.632766 2_3:-46579101 Msa0294590:intron
GCTAGCTATTTATAATGGTG+GGG 0.634982 2_3:-46585761 Msa0294590:five_prime_UTR
TAAGTCAGAGTGTGAGCCTG+TGG 0.635910 2_3:-46578064 Msa0294590:CDS
CCCCAATTGAATAAAACTTG+GGG 0.636059 2_3:+46579708 None:intergenic
CAGCTGACCAAGCTTGAAGG+AGG 0.636561 2_3:+46583162 None:intergenic
GAGATTACACCTACAACTAG+AGG 0.638520 2_3:-46586478 Msa0294590:five_prime_UTR
AGCTATTTATAATGGTGGGG+TGG 0.638542 2_3:-46585758 Msa0294590:five_prime_UTR
GACAGAAATGATGATTCGTG+CGG 0.639414 2_3:-46583089 Msa0294590:CDS
ATTGTCCCAGCTGGACCAAG+AGG 0.642028 2_3:-46584896 Msa0294590:CDS
TCACTGTGGTATAACATACT+CGG 0.642929 2_3:+46583845 None:intergenic
GATGATTCGTGCGGGATGTG+TGG 0.643446 2_3:-46583080 Msa0294590:CDS
TTCAACCCAAAGATAATCCG+AGG 0.645039 2_3:-46583563 Msa0294590:CDS
GCTGCGTTCCCAACATCTAG+CGG 0.645233 2_3:+46578105 None:intergenic
CCGAATGCAGTGAGGAAGAG+GGG 0.646708 2_3:-46583979 Msa0294590:CDS
GGCTTTGGATTCATACCTGT+AGG 0.648460 2_3:-46578568 Msa0294590:CDS
AGTTGCTTACGATGTCAGGA+TGG 0.648897 2_3:-46584840 Msa0294590:CDS
TGAGTCTCCCTTAAGAACTG+AGG 0.649252 2_3:-46584965 Msa0294590:CDS
GATGGCAAGATCACCAAAGA+CGG 0.649596 2_3:-46583308 Msa0294590:CDS
TGAAACTGCAGTAAGGGACG+GGG 0.651622 2_3:+46584871 None:intergenic
AAAGATGGCACTGAATCTGG+TGG 0.653852 2_3:-46577862 Msa0294590:CDS
ATGGGTAAATCTTGAAGACG+AGG 0.655489 2_3:+46585479 None:intergenic
ACAGAAATGATGATTCGTGC+GGG 0.656042 2_3:-46583088 Msa0294590:CDS
AGTGTGAGACGTATTCTCCA+AGG 0.656359 2_3:+46584384 None:intergenic
AAGATTTACCCATCCCGAGG+AGG 0.657563 2_3:-46585469 Msa0294590:CDS
TTGTAGTCAAAGTTGTCGGG+AGG 0.657809 2_3:-46581651 Msa0294590:intron
GCTAAATCCGGCAAATCAAG+GGG 0.658194 2_3:-46583530 Msa0294590:CDS
GACCTCATTCTCAATCAACC+AGG 0.658446 2_3:+46583388 None:intergenic
AGCATCAACGGCCTTCTAGG+CGG 0.659757 2_3:-46584807 Msa0294590:CDS
AAGGTCGGTGCTCTGAAAAG+GGG 0.660345 2_3:-46584511 Msa0294590:CDS
AGATTATGTAGTTGACAGTG+TGG 0.662266 2_3:-46583738 Msa0294590:CDS
TGTCAAGGTAGAAAAGCTTG+TGG 0.662950 2_3:-46578629 Msa0294590:CDS
TCACTGAATGGTGATGTATG+TGG 0.664461 2_3:-46583788 Msa0294590:CDS
ATGTGGCACTCAGACTGTGT+TGG 0.664733 2_3:-46583771 Msa0294590:CDS
GTACATCAGGAGATCCCCGA+CGG 0.665568 2_3:-46582296 Msa0294590:intron
TCTGAATTAGATCTACTACA+AGG 0.675132 2_3:+46585321 None:intergenic
ATAAAACTTGGGGTATCATG+TGG 0.677341 2_3:+46579718 None:intergenic
AATCCAAATGCAAATCACAT+GGG 0.683149 2_3:-46587174 Msa0294590:five_prime_UTR
AATGCAGTGAGGAAGAGGGG+AGG 0.683933 2_3:-46583976 Msa0294590:CDS
TTGATAAGCCAACATAGCAG+CGG 0.700445 2_3:+46584579 None:intergenic
AAGCCAGGTGAAAAGTAGAG+GGG 0.703814 2_3:+46583024 None:intergenic
TGGGTAAATCTTGAAGACGA+GGG 0.715551 2_3:+46585480 None:intergenic
AAATCGGTCCGAATGCAGTG+AGG 0.724403 2_3:-46583987 Msa0294590:CDS
CCGAGTGCAACTGACCTGAG+CGG 0.727239 2_3:+46582995 None:intergenic
TGTTGCCCTTACCATCATGG+AGG 0.739426 2_3:-46579778 Msa0294590:CDS
TTGATCCCAGTATGTCACTG+TGG 0.739707 2_3:+46583831 None:intergenic
ACAGTTGAATCATCTAAACA+CGG 0.740344 2_3:-46585207 Msa0294590:CDS
ATTCCAATGAGACTGCTCTG+GGG 0.741647 2_3:-46585428 Msa0294590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATTTAAAGAAATAAA+TGG - chr2_3:46578376-46578395 Msa0294590:intron 10.0%
!!! ATATATTATTTTACATGAAA+TGG + chr2_3:46578570-46578589 None:intergenic 10.0%
!!! TTTTTTTTGAATAAACAAAA+CGG - chr2_3:46582707-46582726 Msa0294590:intron 10.0%
!! AATAATATTATTAAACAATG+TGG - chr2_3:46584453-46584472 Msa0294590:CDS 10.0%
!! ATAATATTATTAAACAATGT+GGG - chr2_3:46584454-46584473 Msa0294590:CDS 10.0%
!!! ATTTGTTTAATTTGAAGTTT+TGG - chr2_3:46577927-46577946 Msa0294590:CDS 15.0%
!!! AGTCATTTTTTTAATTAGAA+TGG - chr2_3:46583793-46583812 Msa0294590:CDS 15.0%
!!! GTCATTTTTTTAATTAGAAT+GGG - chr2_3:46583794-46583813 Msa0294590:CDS 15.0%
!!! TCATTTTTTTAATTAGAATG+GGG - chr2_3:46583795-46583814 Msa0294590:CDS 15.0%
!!! ATCATAAATGGTTTTATATA+AGG - chr2_3:46583892-46583911 Msa0294590:CDS 15.0%
!! TATTATTCTAATAAAACAGA+AGG + chr2_3:46584440-46584459 None:intergenic 15.0%
!!! TGTTTTGTTTGAATAAATTT+TGG + chr2_3:46585641-46585660 None:intergenic 15.0%
!!! TTATTCTTTGAAATTTGATA+TGG - chr2_3:46585724-46585743 Msa0294590:five_prime_UTR 15.0%
!!! TTTCATAAAGCTATTTTTTG+AGG - chr2_3:46577647-46577666 Msa0294590:three_prime_UTR 20.0%
!!! ATTTTTTCGTTAATTTCTAG+AGG - chr2_3:46577825-46577844 Msa0294590:CDS 20.0%
!!! ATATGATTTTTGTTGCTTAT+TGG - chr2_3:46578072-46578091 Msa0294590:CDS 20.0%
!! TTGAAATATGAAGTGAATTA+AGG - chr2_3:46578188-46578207 Msa0294590:CDS 20.0%
!! TGAAATATGAAGTGAATTAA+GGG - chr2_3:46578189-46578208 Msa0294590:CDS 20.0%
!! TGAAAAACATGAATGAAAAT+TGG - chr2_3:46578418-46578437 Msa0294590:intron 20.0%
!! GAAAAACATGAATGAAAATT+GGG - chr2_3:46578419-46578438 Msa0294590:intron 20.0%
!!! AACGAACAATTTTCTTATTT+AGG - chr2_3:46578731-46578750 Msa0294590:intron 20.0%
!!! TGATTTTATTTGTGTTTACT+TGG - chr2_3:46578822-46578841 Msa0294590:intron 20.0%
!!! GATTTTATTTGTGTTTACTT+GGG - chr2_3:46578823-46578842 Msa0294590:intron 20.0%
!!! TGTAAATCTAAAACAGAAAA+TGG - chr2_3:46579587-46579606 Msa0294590:intron 20.0%
!!! GTAAATCTAAAACAGAAAAT+GGG - chr2_3:46579588-46579607 Msa0294590:intron 20.0%
!! AAATGTATAACTACTACAAA+AGG + chr2_3:46580151-46580170 None:intergenic 20.0%
!!! AGTTATACATTTTGATAGAA+AGG - chr2_3:46580159-46580178 Msa0294590:intron 20.0%
!! GCATATTCTTCAAAAAAAAA+GGG - chr2_3:46580253-46580272 Msa0294590:intron 20.0%
!! TTCAAAAAAAAAGGGTAAAA+TGG - chr2_3:46580261-46580280 Msa0294590:intron 20.0%
!!! CAATTAAAATTTTCCATCAT+AGG - chr2_3:46581993-46582012 Msa0294590:intron 20.0%
!! TTAATTGATATTTGAATGCA+TGG + chr2_3:46582282-46582301 None:intergenic 20.0%
!! TTGTATTGTTTGTATTCTTA+TGG - chr2_3:46582309-46582328 Msa0294590:intron 20.0%
!! ACACAAAAGACAAATTTATA+TGG + chr2_3:46582628-46582647 None:intergenic 20.0%
!!! ATGATCAGTTAATTTGATTA+TGG - chr2_3:46582855-46582874 Msa0294590:intron 20.0%
!! ATGATATCATTTGATTATGA+TGG - chr2_3:46582939-46582958 Msa0294590:intron 20.0%
!!! TATGTTTTAAAAGTACTTGT+AGG - chr2_3:46583252-46583271 Msa0294590:CDS 20.0%
!!! TTTTTTTTAACTAAAGTGTG+TGG - chr2_3:46583453-46583472 Msa0294590:CDS 20.0%
!! TAACTAAAATAGCCATATAT+TGG - chr2_3:46583486-46583505 Msa0294590:CDS 20.0%
!! GTAATAGTTAGAACAAAATA+AGG + chr2_3:46583543-46583562 None:intergenic 20.0%
!!! CATTTTTTTAATTAGAATGG+GGG - chr2_3:46583796-46583815 Msa0294590:CDS 20.0%
!!! TAAATGGTTTTATATAAGGA+TGG - chr2_3:46583896-46583915 Msa0294590:CDS 20.0%
!! ATAAAACAGAAGGAAAAAAT+TGG + chr2_3:46584430-46584449 None:intergenic 20.0%
!! ATAATCATTCTTATGAACAA+GGG + chr2_3:46585708-46585727 None:intergenic 20.0%
!! AATAATCATTCTTATGAACA+AGG + chr2_3:46585709-46585728 None:intergenic 20.0%
!! GTTAAAGAAAAACAACTTAA+TGG - chr2_3:46586162-46586181 Msa0294590:intron 20.0%
!!! AAACAATGATTTTTACTTAC+TGG + chr2_3:46586463-46586482 None:intergenic 20.0%
!!! TATTGGTCATTTTTTCTTTT+TGG - chr2_3:46587068-46587087 Msa0294590:five_prime_UTR 20.0%
!!! ATTGGTCATTTTTTCTTTTT+GGG - chr2_3:46587069-46587088 Msa0294590:five_prime_UTR 20.0%
!!! GTATTTTTCTTTTTCTACTT+GGG + chr2_3:46587106-46587125 None:intergenic 20.0%
!!! TGTATTTTTCTTTTTCTACT+TGG + chr2_3:46587107-46587126 None:intergenic 20.0%
!! GTAGAAAAAGAAAAATACAT+TGG - chr2_3:46587108-46587127 Msa0294590:five_prime_UTR 20.0%
!! AAAAATACATTGGAAGTAAA+GGG - chr2_3:46587118-46587137 Msa0294590:five_prime_UTR 20.0%
! TATAGTTGCTTCATCTAAAA+GGG - chr2_3:46577464-46577483 Msa0294590:three_prime_UTR 25.0%
!!! AGTTTGTTTGTTTTCTTCTT+TGG - chr2_3:46577599-46577618 Msa0294590:three_prime_UTR 25.0%
!!! ATAAAGCTATTTTTTGAGGT+GGG - chr2_3:46577651-46577670 Msa0294590:three_prime_UTR 25.0%
!! TTTCTTCTATGTTCAGATTT+TGG - chr2_3:46577697-46577716 Msa0294590:CDS 25.0%
!! TTCTTCTATGTTCAGATTTT+GGG - chr2_3:46577698-46577717 Msa0294590:CDS 25.0%
!!! ATTTAGTCTTTGTTGTTGAT+AGG - chr2_3:46578152-46578171 Msa0294590:CDS 25.0%
!! ATTTTCATTTCTGTATTTGC+TGG + chr2_3:46578363-46578382 None:intergenic 25.0%
!!! TTACATACTCTTTTTCAAAG+AGG + chr2_3:46578480-46578499 None:intergenic 25.0%
!! TATGATGATATTGCTTTGAA+TGG - chr2_3:46578644-46578663 Msa0294590:intron 25.0%
! TAGTTCAATGAATGCATTAA+TGG - chr2_3:46578672-46578691 Msa0294590:intron 25.0%
! ATATTCTTATGTAGATTCTC+AGG - chr2_3:46578788-46578807 Msa0294590:intron 25.0%
!! ATTTTTACAGAGGTCTTTTT+TGG - chr2_3:46579062-46579081 Msa0294590:intron 25.0%
! AAAAACACATTGAAGTCATT+TGG - chr2_3:46579155-46579174 Msa0294590:CDS 25.0%
!! TAGATCTAATTCAGATGTTT+TGG - chr2_3:46579376-46579395 Msa0294590:intron 25.0%
!! AGATCTAATTCAGATGTTTT+GGG - chr2_3:46579377-46579396 Msa0294590:intron 25.0%
!!! ATACATTTTGATAGAAAGGT+CGG - chr2_3:46580163-46580182 Msa0294590:intron 25.0%
!!! TTGTAGTTTAGTTTCTAGTA+AGG - chr2_3:46580222-46580241 Msa0294590:intron 25.0%
!!! TGTAGTTTAGTTTCTAGTAA+GGG - chr2_3:46580223-46580242 Msa0294590:intron 25.0%
! GGCATATTCTTCAAAAAAAA+AGG - chr2_3:46580252-46580271 Msa0294590:intron 25.0%
! GTATGCTTAAAAAGAAAATG+CGG - chr2_3:46580791-46580810 Msa0294590:intron 25.0%
! AGAAAGCTTAAAAGCTATAA+AGG - chr2_3:46581186-46581205 Msa0294590:intron 25.0%
! TAGTGACAGAATTATCTTTA+GGG + chr2_3:46581359-46581378 None:intergenic 25.0%
! TTAGTGACAGAATTATCTTT+AGG + chr2_3:46581360-46581379 None:intergenic 25.0%
! TAAAGATAATTCTGTCACTA+AGG - chr2_3:46581359-46581378 Msa0294590:intron 25.0%
! GAAAAATTAAACTATCTCCA+GGG + chr2_3:46581916-46581935 None:intergenic 25.0%
! AGAAAAATTAAACTATCTCC+AGG + chr2_3:46581917-46581936 None:intergenic 25.0%
!! TAATTTTTCTGCGTTGTAAT+TGG - chr2_3:46581927-46581946 Msa0294590:intron 25.0%
!! AATTTTTCTGCGTTGTAATT+GGG - chr2_3:46581928-46581947 Msa0294590:intron 25.0%
! ACATGAATGAATCATTATCA+AGG - chr2_3:46582033-46582052 Msa0294590:intron 25.0%
! CATGAATGAATCATTATCAA+GGG - chr2_3:46582034-46582053 Msa0294590:intron 25.0%
! AAATTTGGTCATTGATAAAG+AGG - chr2_3:46582455-46582474 Msa0294590:intron 25.0%
!!! TTGTTGTTTTTTCTGCATAA+AGG - chr2_3:46582750-46582769 Msa0294590:intron 25.0%
! TTCAAGAAACTCAATACAAA+TGG + chr2_3:46583097-46583116 None:intergenic 25.0%
! TGTATTGAGTTTCTTGAATA+TGG - chr2_3:46583099-46583118 Msa0294590:CDS 25.0%
! AGTTTCTTGAATATGGAATA+TGG - chr2_3:46583106-46583125 Msa0294590:CDS 25.0%
!!! TCGTATTCAATACTTTTTGA+AGG - chr2_3:46583217-46583236 Msa0294590:CDS 25.0%
!!! TACTTTTTGAAGGTTATGTT+TGG - chr2_3:46583227-46583246 Msa0294590:CDS 25.0%
!! TTATCTAAAAAGCAACCTTT+TGG + chr2_3:46583339-46583358 None:intergenic 25.0%
! TTGACTTCTCTTACTTTAAA+AGG + chr2_3:46583572-46583591 None:intergenic 25.0%
! GTTATGTGAAAGATCATAAA+TGG - chr2_3:46583880-46583899 Msa0294590:CDS 25.0%
!! TAGCTTTTATCTCTATCTTT+TGG - chr2_3:46583941-46583960 Msa0294590:CDS 25.0%
! AAGGAAAAAATTGGAACAAA+GGG + chr2_3:46584421-46584440 None:intergenic 25.0%
! TTAAATGAAGTACAAAGAAG+AGG + chr2_3:46585038-46585057 None:intergenic 25.0%
! TCTTCTGACATTTATGAAAA+TGG - chr2_3:46585308-46585327 Msa0294590:CDS 25.0%
!! AAATAGCATCTCTGTTTTAT+TGG - chr2_3:46585457-46585476 Msa0294590:CDS 25.0%
!!! AATAGCATCTCTGTTTTATT+GGG - chr2_3:46585458-46585477 Msa0294590:CDS 25.0%
! TCATTAAGTGAAATTTACGT+GGG + chr2_3:46585870-46585889 None:intergenic 25.0%
! ATCATTAAGTGAAATTTACG+TGG + chr2_3:46585871-46585890 None:intergenic 25.0%
!! AAGAAATGGATTTAGAAACA+TGG + chr2_3:46586019-46586038 None:intergenic 25.0%
! ACATCTGCTAATAAAAGAAA+TGG + chr2_3:46586033-46586052 None:intergenic 25.0%
! TTACTTGAAAAATCCTTGTA+TGG - chr2_3:46586202-46586221 Msa0294590:intron 25.0%
!!! AAGATGAAGGTATTTTCATT+TGG - chr2_3:46586233-46586252 Msa0294590:intron 25.0%
!!! GTATTTTCATTTGGTGTATT+TGG - chr2_3:46586242-46586261 Msa0294590:intron 25.0%
!!! TTACTTACTGGTTTATGATA+AGG + chr2_3:46586451-46586470 None:intergenic 25.0%
! TATCAATATAGGTGAAGTAA+AGG - chr2_3:46586871-46586890 Msa0294590:five_prime_UTR 25.0%
!!! TATGATGAAACCGTTATTTT+TGG - chr2_3:46586989-46587008 Msa0294590:five_prime_UTR 25.0%
! GAAAAATACATTGGAAGTAA+AGG - chr2_3:46587117-46587136 Msa0294590:five_prime_UTR 25.0%
! AAAATACATTGGAAGTAAAG+GGG - chr2_3:46587119-46587138 Msa0294590:five_prime_UTR 25.0%
! AAATGAAATCTGTTCTAACT+TGG - chr2_3:46587175-46587194 Msa0294590:five_prime_UTR 25.0%
GTATAGTTGCTTCATCTAAA+AGG - chr2_3:46577463-46577482 Msa0294590:three_prime_UTR 30.0%
CATTTGGATTTGTCTATTTG+TGG + chr2_3:46577505-46577524 None:intergenic 30.0%
AAATCCAAATGCAAATCACA+TGG - chr2_3:46577514-46577533 Msa0294590:three_prime_UTR 30.0%
AATCCAAATGCAAATCACAT+GGG - chr2_3:46577515-46577534 Msa0294590:three_prime_UTR 30.0%
!!! CATAAAGCTATTTTTTGAGG+TGG - chr2_3:46577650-46577669 Msa0294590:three_prime_UTR 30.0%
!!! TAAAGCTATTTTTTGAGGTG+GGG - chr2_3:46577652-46577671 Msa0294590:three_prime_UTR 30.0%
! ATTTCGAGAAACCCTAATTT+TGG - chr2_3:46577723-46577742 Msa0294590:CDS 30.0%
ATTTCTTGAGAATCTGAGTT+GGG - chr2_3:46577771-46577790 Msa0294590:CDS 30.0%
TTCATTCATGCATGTAGATT+TGG - chr2_3:46577860-46577879 Msa0294590:CDS 30.0%
!!! TTTTAGCTTGTGAAGTTTGA+TGG - chr2_3:46577978-46577997 Msa0294590:CDS 30.0%
GCATGAAGATTTATCAATGT+TGG - chr2_3:46578104-46578123 Msa0294590:CDS 30.0%
ACATGAATGAAAATTGGGAA+TGG - chr2_3:46578424-46578443 Msa0294590:intron 30.0%
!! TTTTGGAAACGTGTTAATTG+TGG - chr2_3:46578615-46578634 Msa0294590:CDS 30.0%
TTTGGAAACGTGTTAATTGT+GGG - chr2_3:46578616-46578635 Msa0294590:CDS 30.0%
ACAAATAAAATCACGTCGTA+AGG + chr2_3:46578815-46578834 None:intergenic 30.0%
! TGAATTTGTTTACAGTATGC+AGG - chr2_3:46578904-46578923 Msa0294590:intron 30.0%
AGCTAGCTATTTATAATGGT+GGG - chr2_3:46578927-46578946 Msa0294590:intron 30.0%
TTATGCGATGATAACTTTGA+AGG - chr2_3:46579020-46579039 Msa0294590:intron 30.0%
! AGAAAGACAGATTTTTACAG+AGG - chr2_3:46579052-46579071 Msa0294590:intron 30.0%
TCTGAATTAGATCTACTACA+AGG + chr2_3:46579371-46579390 None:intergenic 30.0%
! AGGTTGGAAATTACTACTTT+TGG + chr2_3:46579416-46579435 None:intergenic 30.0%
ACAGTTGAATCATCTAAACA+CGG - chr2_3:46579482-46579501 Msa0294590:CDS 30.0%
CTATCTATTGAAGCATAACT+TGG - chr2_3:46579520-46579539 Msa0294590:CDS 30.0%
AGGGTTTCAATCTTCTAATA+TGG - chr2_3:46579757-46579776 Msa0294590:CDS 30.0%
ACAAAAGTTTGGAGATTATG+TGG - chr2_3:46579956-46579975 Msa0294590:intron 30.0%
! ACTTTTCAACAGACAAAAGT+TGG + chr2_3:46579982-46580001 None:intergenic 30.0%
! GAAAAGTGCAATGTAACATA+TGG - chr2_3:46579995-46580014 Msa0294590:intron 30.0%
TAATATTGGTCCATTCCTTA+CGG + chr2_3:46580024-46580043 None:intergenic 30.0%
!! AGTTTCTAGTAAGGGTAAAA+TGG - chr2_3:46580231-46580250 Msa0294590:intron 30.0%
! CATAAAAGCAGATATTTCTG+TGG + chr2_3:46580389-46580408 None:intergenic 30.0%
!! AATCGGTTTTCTATGATGTT+TGG + chr2_3:46580481-46580500 None:intergenic 30.0%
CATCATAGAAAACCGATTAA+TGG - chr2_3:46580483-46580502 Msa0294590:intron 30.0%
TCACTGACATTTCCATTAAT+CGG + chr2_3:46580498-46580517 None:intergenic 30.0%
!! TTTTTGGGAAAGATAGTACA+TGG - chr2_3:46580755-46580774 Msa0294590:intron 30.0%
!! CTTTTTAAGCATACCATTAG+AGG + chr2_3:46580785-46580804 None:intergenic 30.0%
!! TTGTTTTGTTAATATGTCGC+TGG + chr2_3:46581017-46581036 None:intergenic 30.0%
ATCTTCAATATGGCATCTAT+TGG + chr2_3:46581067-46581086 None:intergenic 30.0%
ATAGATCGTCATCTTCAATA+TGG + chr2_3:46581077-46581096 None:intergenic 30.0%
ATTTACCTCGGATTATCTTT+GGG + chr2_3:46581134-46581153 None:intergenic 30.0%
!! ATTTAGCTCTAGATTTACCT+CGG + chr2_3:46581146-46581165 None:intergenic 30.0%
!! ATGGGAAGAAGTATTATCTT+GGG - chr2_3:46581262-46581281 Msa0294590:intron 30.0%
!! CAGAATTATCTTTAGGGTTT+CGG + chr2_3:46581353-46581372 None:intergenic 30.0%
TCATGAAAAGATTCAAGCAA+GGG + chr2_3:46581482-46581501 None:intergenic 30.0%
TTCATGAAAAGATTCAAGCA+AGG + chr2_3:46581483-46581502 None:intergenic 30.0%
! TTGAATCTTTTCATGAAGTC+TGG - chr2_3:46581486-46581505 Msa0294590:intron 30.0%
ACAATTTATCAGCAATGACA+AGG + chr2_3:46581763-46581782 None:intergenic 30.0%
!!! CAAGTGTTTTGCTATTGTAA+AGG + chr2_3:46581868-46581887 None:intergenic 30.0%
TGCATGGAATAAAAAGAAGT+AGG + chr2_3:46582266-46582285 None:intergenic 30.0%
TTATGGATGTGACTATTGTT+GGG - chr2_3:46582326-46582345 Msa0294590:intron 30.0%
!!! ATGTTTTGTTTCTGTACATC+AGG - chr2_3:46582380-46582399 Msa0294590:intron 30.0%
CAAAACGGTTCAAATATTGT+TGG - chr2_3:46582722-46582741 Msa0294590:intron 30.0%
! CTCAATACAAATGGAAGTAT+GGG + chr2_3:46583088-46583107 None:intergenic 30.0%
ACTCAATACAAATGGAAGTA+TGG + chr2_3:46583089-46583108 None:intergenic 30.0%
CATATTGTATGACAGTGTAA+TGG - chr2_3:46583153-46583172 Msa0294590:CDS 30.0%
!! TAAAAGTACTTGTAGGTTTC+TGG - chr2_3:46583259-46583278 Msa0294590:CDS 30.0%
AAAAAATGACTTTCAGCACA+CGG + chr2_3:46583784-46583803 None:intergenic 30.0%
GATTTACCTGTGAATAATCA+TGG - chr2_3:46584076-46584095 Msa0294590:CDS 30.0%
AAGTATCCATGATTATTCAC+AGG + chr2_3:46584085-46584104 None:intergenic 30.0%
TATCTCATACAACTTGATGT+GGG + chr2_3:46584291-46584310 None:intergenic 30.0%
TTATCTCATACAACTTGATG+TGG + chr2_3:46584292-46584311 None:intergenic 30.0%
! TAATCGTTAGAGTGTTTAAG+TGG - chr2_3:46584309-46584328 Msa0294590:CDS 30.0%
ATCATACTGATAAGTATCCA+AGG + chr2_3:46584385-46584404 None:intergenic 30.0%
TTGGATACTTATCAGTATGA+TGG - chr2_3:46584384-46584403 Msa0294590:CDS 30.0%
TGGATACTTATCAGTATGAT+GGG - chr2_3:46584385-46584404 Msa0294590:CDS 30.0%
GAAGGAAAAAATTGGAACAA+AGG + chr2_3:46584422-46584441 None:intergenic 30.0%
TTATCCTAACATCATCTCAT+TGG - chr2_3:46584700-46584719 Msa0294590:CDS 30.0%
! TCATTGGTGTTCTTTAATCA+AGG - chr2_3:46584716-46584735 Msa0294590:CDS 30.0%
! TAATCAAGGACTTGACTTTT+TGG - chr2_3:46584730-46584749 Msa0294590:CDS 30.0%
CTAGTTAATCAAATTGCTGA+TGG - chr2_3:46584792-46584811 Msa0294590:CDS 30.0%
!!! TACCCCAAGTTTTATTCAAT+TGG - chr2_3:46584979-46584998 Msa0294590:CDS 30.0%
!!! ACCCCAAGTTTTATTCAATT+GGG - chr2_3:46584980-46584999 Msa0294590:CDS 30.0%
! ATAAGAGACGGAGTATTATT+TGG + chr2_3:46585065-46585084 None:intergenic 30.0%
TTGAAATAGAGCATAAGAGA+CGG + chr2_3:46585077-46585096 None:intergenic 30.0%
TATTTCAAAGCCTCAACTTT+AGG - chr2_3:46585089-46585108 Msa0294590:CDS 30.0%
AAGACAAAATCCTAAAGTTG+AGG + chr2_3:46585102-46585121 None:intergenic 30.0%
TTGTCTTGTCTTGATTTCTA+AGG - chr2_3:46585115-46585134 Msa0294590:CDS 30.0%
TAATATCTGTAGCATCTATC+AGG - chr2_3:46585227-46585246 Msa0294590:CDS 30.0%
CAATTCATTCATAAATCGAC+TGG + chr2_3:46585410-46585429 None:intergenic 30.0%
ATTTGATATGGATTTGCACT+TGG - chr2_3:46585736-46585755 Msa0294590:five_prime_UTR 30.0%
TGTATAAACAGCTATGAGTT+CGG - chr2_3:46585950-46585969 Msa0294590:intron 30.0%
! AATGGATTTAGAAACATGGA+AGG + chr2_3:46586015-46586034 None:intergenic 30.0%
! AACAACTTAATGGTTTTTCC+TGG - chr2_3:46586172-46586191 Msa0294590:intron 30.0%
! ACGAAAGGATGATTTTTGAT+TGG + chr2_3:46586337-46586356 None:intergenic 30.0%
ATCCTTTCGTATGACTATTA+TGG - chr2_3:46586347-46586366 Msa0294590:intron 30.0%
TACCATAATAGTCATACGAA+AGG + chr2_3:46586352-46586371 None:intergenic 30.0%
ACAGATGAATCATTCAAAGT+AGG - chr2_3:46586524-46586543 Msa0294590:five_prime_UTR 30.0%
CAAAAATCAACCAGACAATA+GGG - chr2_3:46586652-46586671 Msa0294590:five_prime_UTR 30.0%
ATCTCCTAATGCAATTTCAA+CGG + chr2_3:46586714-46586733 None:intergenic 30.0%
TGCTAGTGAACCAAAAATAA+CGG + chr2_3:46587002-46587021 None:intergenic 30.0%
AACTCTGCAAATTAGAGAAA+TGG - chr2_3:46587022-46587041 Msa0294590:five_prime_UTR 30.0%
GCTCTTAATATACACGTTAT+TGG - chr2_3:46587051-46587070 Msa0294590:five_prime_UTR 30.0%
AGTAAAGGGGTGATATAATT+AGG - chr2_3:46587132-46587151 Msa0294590:five_prime_UTR 30.0%
AACAGAATGAAAAAGTAGAG+AGG - chr2_3:46587213-46587232 Msa0294590:five_prime_UTR 30.0%
ACAGAATGAAAAAGTAGAGA+GGG - chr2_3:46587214-46587233 Msa0294590:five_prime_UTR 30.0%
AGAGAGAGAAACTCAGAAAA+AGG - chr2_3:46577556-46577575 Msa0294590:three_prime_UTR 35.0%
GAGAGAGAAACTCAGAAAAA+GGG - chr2_3:46577557-46577576 Msa0294590:three_prime_UTR 35.0%
GAATTCGTTGTAGCATTGTT+GGG - chr2_3:46577621-46577640 Msa0294590:three_prime_UTR 35.0%
GATTTCTTGAGAATCTGAGT+TGG - chr2_3:46577770-46577789 Msa0294590:CDS 35.0%
CGATGATTCTCTACAGTTAT+AGG - chr2_3:46578333-46578352 Msa0294590:intron 35.0%
! CCAAAATTAGCTTAGAGAGA+GGG + chr2_3:46578601-46578620 None:intergenic 35.0%
! TCCAAAATTAGCTTAGAGAG+AGG + chr2_3:46578602-46578621 None:intergenic 35.0%
CAGGAGCTAGCTATTTATAA+TGG - chr2_3:46578923-46578942 Msa0294590:intron 35.0%
GAGCTAGCTATTTATAATGG+TGG - chr2_3:46578926-46578945 Msa0294590:intron 35.0%
GCTAGCTATTTATAATGGTG+GGG - chr2_3:46578928-46578947 Msa0294590:intron 35.0%
! TTTTCGTGGATTCATGTTCA+AGG + chr2_3:46579139-46579158 None:intergenic 35.0%
! TGACTTCAATGTGTTTTTCG+TGG + chr2_3:46579153-46579172 None:intergenic 35.0%
!! TGGCTCTAGTAATGAAAACT+CGG - chr2_3:46579175-46579194 Msa0294590:CDS 35.0%
GTAATGAAAACTCGGTCATA+TGG - chr2_3:46579183-46579202 Msa0294590:intron 35.0%
AATTGCATTAATGTCCTCCT+CGG + chr2_3:46579237-46579256 None:intergenic 35.0%
TCTTCACAAGTTAAACTCTC+TGG + chr2_3:46579293-46579312 None:intergenic 35.0%
TTACTTACAGACACCTCTTT+CGG + chr2_3:46579620-46579639 None:intergenic 35.0%
TTCTTCACAACAGTGATTGA+TGG + chr2_3:46579701-46579720 None:intergenic 35.0%
TTAGAAGATTGAAACCCTTC+AGG + chr2_3:46579755-46579774 None:intergenic 35.0%
ACGATATGAAACTGCAGTAA+GGG + chr2_3:46579827-46579846 None:intergenic 35.0%
TCATTCTACAAGACACCAAA+GGG - chr2_3:46579914-46579933 Msa0294590:CDS 35.0%
CACCAAAGGGAAAAATTATG+CGG - chr2_3:46579927-46579946 Msa0294590:CDS 35.0%
ACCAAAGGGAAAAATTATGC+GGG - chr2_3:46579928-46579947 Msa0294590:CDS 35.0%
TGCGGGAATTTACAAAAGTT+TGG - chr2_3:46579945-46579964 Msa0294590:intron 35.0%
AAGTGCAATGTAACATATGG+AGG - chr2_3:46579998-46580017 Msa0294590:intron 35.0%
! GGACCAATATTAGCGATTTT+TGG - chr2_3:46580032-46580051 Msa0294590:intron 35.0%
GGACCAAAAATCGCTAATAT+TGG + chr2_3:46580038-46580057 None:intergenic 35.0%
CTTCGACATACATATCTTCT+TGG + chr2_3:46580450-46580469 None:intergenic 35.0%
!! AAAAGAGGAAGCACTTGAAT+GGG + chr2_3:46580578-46580597 None:intergenic 35.0%
GCTTGTAAGAACATCAAAAG+AGG + chr2_3:46580593-46580612 None:intergenic 35.0%
TTTGATGTTCTTACAAGCTC+TGG - chr2_3:46580595-46580614 Msa0294590:intron 35.0%
!! TCTTACAAGCTCTGGAAATT+TGG - chr2_3:46580603-46580622 Msa0294590:intron 35.0%
ATAAGCACGCATCAGAAAAT+CGG - chr2_3:46580686-46580705 Msa0294590:intron 35.0%
! ATCTCAATGGCTTCTGTTTT+TGG - chr2_3:46580739-46580758 Msa0294590:intron 35.0%
!! TCTCAATGGCTTCTGTTTTT+GGG - chr2_3:46580740-46580759 Msa0294590:intron 35.0%
TCACTGTGGTATAACATACT+CGG + chr2_3:46580847-46580866 None:intergenic 35.0%
TTATACCACAGTGACATACT+GGG - chr2_3:46580853-46580872 Msa0294590:intron 35.0%
AGATTATGTAGTTGACAGTG+TGG - chr2_3:46580951-46580970 Msa0294590:intron 35.0%
GATTATGTAGTTGACAGTGT+GGG - chr2_3:46580952-46580971 Msa0294590:intron 35.0%
TTGACAGTGTGGGAAAAAAA+AGG - chr2_3:46580962-46580981 Msa0294590:intron 35.0%
AGGAACAAGAAGAAGTTATC+AGG - chr2_3:46580982-46581001 Msa0294590:intron 35.0%
GTCAGCAATACTCAAGAATA+AGG - chr2_3:46581101-46581120 Msa0294590:intron 35.0%
GATTTACCTCGGATTATCTT+TGG + chr2_3:46581135-46581154 None:intergenic 35.0%
! GGTAAATCTAGAGCTAAATC+CGG - chr2_3:46581147-46581166 Msa0294590:intron 35.0%
!! GATGGGAAGAAGTATTATCT+TGG - chr2_3:46581261-46581280 Msa0294590:intron 35.0%
!! TGGGAAGAAGTATTATCTTG+GGG - chr2_3:46581263-46581282 Msa0294590:intron 35.0%
!! AGAAGTATTATCTTGGGGAA+AGG - chr2_3:46581268-46581287 Msa0294590:intron 35.0%
GATAATTCTGTCACTAAGGA+TGG - chr2_3:46581363-46581382 Msa0294590:intron 35.0%
CTTACAAACAATACCGTCTT+TGG + chr2_3:46581397-46581416 None:intergenic 35.0%
! GGTATTGTTTGTAAGTGTTG+CGG - chr2_3:46581402-46581421 Msa0294590:intron 35.0%
!!! AGCTTGATTTTGACTTTTCC+TGG + chr2_3:46581562-46581581 None:intergenic 35.0%
AGGAAAAGTCAAAATCAAGC+TGG - chr2_3:46581561-46581580 Msa0294590:intron 35.0%
GGAAAAGTCAAAATCAAGCT+GGG - chr2_3:46581562-46581581 Msa0294590:intron 35.0%
AATTCAAACCTGCTATTGAG+TGG - chr2_3:46581802-46581821 Msa0294590:intron 35.0%
AAGGTGTGTATATGTGAGAA+TGG + chr2_3:46581849-46581868 None:intergenic 35.0%
GTTTGACAGTTCGTTTGTAT+TGG + chr2_3:46582107-46582126 None:intergenic 35.0%
TGTCAAACATTATGCGATGT+TGG - chr2_3:46582119-46582138 Msa0294590:intron 35.0%
CTTATGGATGTGACTATTGT+TGG - chr2_3:46582325-46582344 Msa0294590:intron 35.0%
! AAACATGTGTCATTCTTCTG+AGG + chr2_3:46582366-46582385 None:intergenic 35.0%
TTGTCGGATTTGTGGAAATT+TGG - chr2_3:46582440-46582459 Msa0294590:intron 35.0%
ATTATGCAACGTGAACATGA+AGG + chr2_3:46582539-46582558 None:intergenic 35.0%
ACGTTGCATAATAGATTGCA+TGG - chr2_3:46582547-46582566 Msa0294590:intron 35.0%
TCCTCAAACTCTACAATTGT+TGG - chr2_3:46582788-46582807 Msa0294590:intron 35.0%
ACCAACAATTGTAGAGTTTG+AGG + chr2_3:46582792-46582811 None:intergenic 35.0%
ATAGATCACAAGAAATGCCT+CGG - chr2_3:46582973-46582992 Msa0294590:intron 35.0%
GGAGAAAGAGATAAACTAGA+AGG - chr2_3:46582994-46583013 Msa0294590:intron 35.0%
!! GGTTTTGTAGTCAAAGTTGT+CGG - chr2_3:46583034-46583053 Msa0294590:CDS 35.0%
! GTTTTGTAGTCAAAGTTGTC+GGG - chr2_3:46583035-46583054 Msa0294590:CDS 35.0%
ACTGTCATACAATATGTCAC+AGG + chr2_3:46583149-46583168 None:intergenic 35.0%
CTAAAGTGTGTGGTAACAAT+AGG - chr2_3:46583463-46583482 Msa0294590:CDS 35.0%
TCGTTCTACTCACCAATATA+TGG + chr2_3:46583501-46583520 None:intergenic 35.0%
! CCTTTTACGTGTCAGTAAAA+AGG + chr2_3:46583597-46583616 None:intergenic 35.0%
! CCTTTTTACTGACACGTAAA+AGG - chr2_3:46583594-46583613 Msa0294590:CDS 35.0%
!! TTTTAATTAGAATGGGGGCA+TGG - chr2_3:46583801-46583820 Msa0294590:CDS 35.0%
ACATGATACTAGAGGTTCTA+CGG + chr2_3:46583853-46583872 None:intergenic 35.0%
TATGCATTCACACCTTTAAG+AGG - chr2_3:46584020-46584039 Msa0294590:CDS 35.0%
CACTTCGGTTAATAGGTAAT+CGG - chr2_3:46584112-46584131 Msa0294590:CDS 35.0%
TGCTTGAAAAGGGTTAACTA+GGG - chr2_3:46584155-46584174 Msa0294590:CDS 35.0%
CGATAGGAACTTGGTTATTA+TGG - chr2_3:46584254-46584273 Msa0294590:CDS 35.0%
TACAACTTGATGTGGGATTT+GGG + chr2_3:46584284-46584303 None:intergenic 35.0%
ATACAACTTGATGTGGGATT+TGG + chr2_3:46584285-46584304 None:intergenic 35.0%
TTAAAAGCTAGCTATCGAGA+GGG + chr2_3:46584345-46584364 None:intergenic 35.0%
!!! TCTCGATAGCTAGCTTTTAA+GGG - chr2_3:46584345-46584364 Msa0294590:CDS 35.0%
TGATAAGTATCCAAGGACTT+GGG + chr2_3:46584378-46584397 None:intergenic 35.0%
!!! GGGTTTTTTATTTCACCGTA+AGG - chr2_3:46584474-46584493 Msa0294590:CDS 35.0%
AGGAGTTACAAGTTTACAGT+TGG - chr2_3:46584503-46584522 Msa0294590:CDS 35.0%
GGAGTTACAAGTTTACAGTT+GGG - chr2_3:46584504-46584523 Msa0294590:CDS 35.0%
GAGTTACAAGTTTACAGTTG+GGG - chr2_3:46584505-46584524 Msa0294590:CDS 35.0%
CTAGTTATTAACCGCATTCT+AGG + chr2_3:46584600-46584619 None:intergenic 35.0%
ATGCGGTTAATAACTAGATC+AGG - chr2_3:46584603-46584622 Msa0294590:CDS 35.0%
AACACCAATGAGATGATGTT+AGG + chr2_3:46584707-46584726 None:intergenic 35.0%
ATGCATACATGATGACCAAA+AGG - chr2_3:46584836-46584855 Msa0294590:CDS 35.0%
TGTATTGCATACTGCCTTTA+GGG + chr2_3:46584883-46584902 None:intergenic 35.0%
TTGTATTGCATACTGCCTTT+AGG + chr2_3:46584884-46584903 None:intergenic 35.0%
TCAATGCTAGATCTAAGAAC+AGG - chr2_3:46584945-46584964 Msa0294590:CDS 35.0%
! ATAAAACTTGGGGTATCATG+TGG + chr2_3:46584974-46584993 None:intergenic 35.0%
CCCCAATTGAATAAAACTTG+GGG + chr2_3:46584984-46585003 None:intergenic 35.0%
!!! CCCCAAGTTTTATTCAATTG+GGG - chr2_3:46584981-46585000 Msa0294590:CDS 35.0%
CCCCCAATTGAATAAAACTT+GGG + chr2_3:46584985-46585004 None:intergenic 35.0%
!!! CCCAAGTTTTATTCAATTGG+GGG - chr2_3:46584982-46585001 Msa0294590:CDS 35.0%
ACCCCCAATTGAATAAAACT+TGG + chr2_3:46584986-46585005 None:intergenic 35.0%
TTTATTCAATTGGGGGTTAG+TGG - chr2_3:46584989-46585008 Msa0294590:CDS 35.0%
AGAGGTGGAAAAATTGTCAT+GGG + chr2_3:46585020-46585039 None:intergenic 35.0%
AAGAGGTGGAAAAATTGTCA+TGG + chr2_3:46585021-46585040 None:intergenic 35.0%
AATGAAGTACAAAGAAGAGG+TGG + chr2_3:46585035-46585054 None:intergenic 35.0%
! TTAACTTCCATGTGGTTTTC+AGG - chr2_3:46585140-46585159 Msa0294590:CDS 35.0%
! TTTGCTCGTCTGAATTTTCA+AGG - chr2_3:46585169-46585188 Msa0294590:CDS 35.0%
! TTGCTCGTCTGAATTTTCAA+GGG - chr2_3:46585170-46585189 Msa0294590:CDS 35.0%
!! TTTTCAAGGGTTTTACACAG+TGG - chr2_3:46585183-46585202 Msa0294590:CDS 35.0%
CATTCATAAATCGACTGGAA+GGG + chr2_3:46585405-46585424 None:intergenic 35.0%
TCATTCATAAATCGACTGGA+AGG + chr2_3:46585406-46585425 None:intergenic 35.0%
GCACTCTGCAAATAAGTAAA+AGG + chr2_3:46585495-46585514 None:intergenic 35.0%
TTACTTATTTGCAGAGTGCA+CGG - chr2_3:46585496-46585515 Msa0294590:CDS 35.0%
! ATTCCTGCATTTGCTTCTTT+TGG - chr2_3:46585976-46585995 Msa0294590:intron 35.0%
GCAGATGTTAATATCTGTCA+AGG - chr2_3:46586045-46586064 Msa0294590:intron 35.0%
!!! TTTTCAAGTAACACTGTTCC+AGG + chr2_3:46586193-46586212 None:intergenic 35.0%
ATCTTTCTTCTTGCCATACA+AGG + chr2_3:46586218-46586237 None:intergenic 35.0%
TATGGCAAGAAGAAAGATGA+AGG - chr2_3:46586220-46586239 Msa0294590:intron 35.0%
!! AGAGACTAGTTTCGATATAC+TGG - chr2_3:46586284-46586303 Msa0294590:intron 35.0%
GCAAAAATCAACCAGACAAT+AGG - chr2_3:46586651-46586670 Msa0294590:five_prime_UTR 35.0%
AAGAATCAACAGAGACAAGT+AGG - chr2_3:46586735-46586754 Msa0294590:five_prime_UTR 35.0%
CACATTGTTTCCTTCAAAAG+GGG + chr2_3:46586783-46586802 None:intergenic 35.0%
CCACATTGTTTCCTTCAAAA+GGG + chr2_3:46586784-46586803 None:intergenic 35.0%
TCCACATTGTTTCCTTCAAA+AGG + chr2_3:46586785-46586804 None:intergenic 35.0%
!! TTTTGAAGGAAACAATGTGG+AGG - chr2_3:46586784-46586803 Msa0294590:five_prime_UTR 35.0%
GAGGACAAGCATATCAATAT+AGG - chr2_3:46586860-46586879 Msa0294590:five_prime_UTR 35.0%
TCTGCAAATTAGAGAAATGG+TGG - chr2_3:46587025-46587044 Msa0294590:five_prime_UTR 35.0%
CTGCAAATTAGAGAAATGGT+GGG - chr2_3:46587026-46587045 Msa0294590:five_prime_UTR 35.0%
TTTCACGCTAGCTAATGTTT+AGG + chr2_3:46587158-46587177 None:intergenic 35.0%
! CTTCCCATGTGATTTGCATT+TGG + chr2_3:46577521-46577540 None:intergenic 40.0%
TGCAAATCACATGGGAAGAA+AGG - chr2_3:46577523-46577542 Msa0294590:three_prime_UTR 40.0%
TCACATGGGAAGAAAGGATA+TGG - chr2_3:46577529-46577548 Msa0294590:three_prime_UTR 40.0%
GGAATTCGTTGTAGCATTGT+TGG - chr2_3:46577620-46577639 Msa0294590:three_prime_UTR 40.0%
! TCGAGAAACCCTAATTTTGG+TGG - chr2_3:46577726-46577745 Msa0294590:CDS 40.0%
!! CGAGAAACCCTAATTTTGGT+GGG - chr2_3:46577727-46577746 Msa0294590:CDS 40.0%
CAGTTCACCCACCAAAATTA+GGG + chr2_3:46577737-46577756 None:intergenic 40.0%
ACAGTTCACCCACCAAAATT+AGG + chr2_3:46577738-46577757 None:intergenic 40.0%
! TTGAGAATCTGAGTTGGGTA+GGG - chr2_3:46577776-46577795 Msa0294590:CDS 40.0%
! TCGTTAATTTCTAGAGGAGC+TGG - chr2_3:46577831-46577850 Msa0294590:CDS 40.0%
GCATGTAGATTTGGAGAAAC+TGG - chr2_3:46577869-46577888 Msa0294590:CDS 40.0%
GAGATTACACCTACAACTAG+AGG - chr2_3:46578211-46578230 Msa0294590:intron 40.0%
CAGTAACAACCTCTAGTTGT+AGG + chr2_3:46578223-46578242 None:intergenic 40.0%
CTAGATTCGTAGACTGCATT+GGG - chr2_3:46578513-46578532 Msa0294590:CDS 40.0%
! CCCTCTCTCTAAGCTAATTT+TGG - chr2_3:46578598-46578617 Msa0294590:CDS 40.0%
AAACGTGTTAATTGTGGGCA+GGG - chr2_3:46578621-46578640 Msa0294590:CDS 40.0%
AGAAATGAAGTTCGTCAACC+AGG - chr2_3:46578851-46578870 Msa0294590:intron 40.0%
GAAATGAAGTTCGTCAACCA+GGG - chr2_3:46578852-46578871 Msa0294590:intron 40.0%
! AGCTATTTATAATGGTGGGG+TGG - chr2_3:46578931-46578950 Msa0294590:intron 40.0%
CACTTCACAGCTTCTATTAC+TGG + chr2_3:46578968-46578987 None:intergenic 40.0%
TGCACTAGTCAGCAACAAAA+TGG - chr2_3:46578992-46579011 Msa0294590:intron 40.0%
! ACACTTTTCAGTCTAGTCAG+AGG - chr2_3:46579090-46579109 Msa0294590:intron 40.0%
GGATTCATGTTCAAGGTTGA+TGG + chr2_3:46579132-46579151 None:intergenic 40.0%
TGGGTAAATCTTGAAGACGA+GGG + chr2_3:46579212-46579231 None:intergenic 40.0%
ATGGGTAAATCTTGAAGACG+AGG + chr2_3:46579213-46579232 None:intergenic 40.0%
ATTGCATTAATGTCCTCCTC+GGG + chr2_3:46579236-46579255 None:intergenic 40.0%
!!! TCAGATGTTTTGGGTTCATC+TGG - chr2_3:46579386-46579405 Msa0294590:intron 40.0%
TACTTACAGACACCTCTTTC+GGG + chr2_3:46579619-46579638 None:intergenic 40.0%
!! GAAAGAGGTGTCTGTAAGTA+AGG - chr2_3:46579619-46579638 Msa0294590:intron 40.0%
GGCATTTCCTCAGTTCTTAA+GGG + chr2_3:46579734-46579753 None:intergenic 40.0%
AGGCATTTCCTCAGTTCTTA+AGG + chr2_3:46579735-46579754 None:intergenic 40.0%
TATGAAACTGCAGTAAGGGA+CGG + chr2_3:46579823-46579842 None:intergenic 40.0%
CACGATATGAAACTGCAGTA+AGG + chr2_3:46579828-46579847 None:intergenic 40.0%
GTCATTCTACAAGACACCAA+AGG - chr2_3:46579913-46579932 Msa0294590:CDS 40.0%
! TCCCGCATAATTTTTCCCTT+TGG + chr2_3:46579932-46579951 None:intergenic 40.0%
TTTCAGTGCACTCGATAGAT+CGG + chr2_3:46580059-46580078 None:intergenic 40.0%
TTGATAAGCCAACATAGCAG+CGG + chr2_3:46580113-46580132 None:intergenic 40.0%
!! CTGCTATGTTGGCTTATCAA+TGG - chr2_3:46580113-46580132 Msa0294590:intron 40.0%
!! CTATGTTGGCTTATCAATGG+TGG - chr2_3:46580116-46580135 Msa0294590:intron 40.0%
!! GGCTTATCAATGGTGGATTA+TGG - chr2_3:46580123-46580142 Msa0294590:intron 40.0%
TGTTGAAGAGTCGCAGAAAA+TGG + chr2_3:46580356-46580375 None:intergenic 40.0%
!! AGATATTTCTGTGGTTCTGG+TGG + chr2_3:46580380-46580399 None:intergenic 40.0%
! AGCAGATATTTCTGTGGTTC+TGG + chr2_3:46580383-46580402 None:intergenic 40.0%
GTCAGTGAGCAAAAGTAGTA+TGG - chr2_3:46580510-46580529 Msa0294590:intron 40.0%
TCTTTACCTGCTTGTGCATT+GGG - chr2_3:46580541-46580560 Msa0294590:intron 40.0%
!! CAAAAGAGGAAGCACTTGAA+TGG + chr2_3:46580579-46580598 None:intergenic 40.0%
!! AAGCTCTGGAAATTTGGACT+TGG - chr2_3:46580609-46580628 Msa0294590:intron 40.0%
AGTACATGGTCTTCCTCTAA+TGG - chr2_3:46580769-46580788 Msa0294590:intron 40.0%
! AAATGCGGAAGAAGTGCAAA+AGG - chr2_3:46580806-46580825 Msa0294590:intron 40.0%
GTTATACCACAGTGACATAC+TGG - chr2_3:46580852-46580871 Msa0294590:intron 40.0%
GGGATCAACTATTACTGATC+AGG - chr2_3:46580873-46580892 Msa0294590:intron 40.0%
! TCACTGAATGGTGATGTATG+TGG - chr2_3:46580901-46580920 Msa0294590:intron 40.0%
TTCAACCCAAAGATAATCCG+AGG - chr2_3:46581126-46581145 Msa0294590:intron 40.0%
AGCTAAATCCGGCAAATCAA+GGG - chr2_3:46581158-46581177 Msa0294590:intron 40.0%
! CAAGGAATCCTTGTAATGGA+GGG - chr2_3:46581226-46581245 Msa0294590:intron 40.0%
! TAATGGAGGGAAGCACAATA+TGG - chr2_3:46581239-46581258 Msa0294590:intron 40.0%
! TGTTTGTAAGTGTTGCGGTA+AGG - chr2_3:46581407-46581426 Msa0294590:intron 40.0%
TCAGAGTTCAAGATTCATGC+TGG - chr2_3:46581441-46581460 Msa0294590:intron 40.0%
CAGAGTTCAAGATTCATGCT+GGG - chr2_3:46581442-46581461 Msa0294590:intron 40.0%
TGAAGGAGGCAAAGTGTAAA+GGG + chr2_3:46581516-46581535 None:intergenic 40.0%
TTGAAGGAGGCAAAGTGTAA+AGG + chr2_3:46581517-46581536 None:intergenic 40.0%
GACAGAAATGATGATTCGTG+CGG - chr2_3:46581600-46581619 Msa0294590:intron 40.0%
ACAGAAATGATGATTCGTGC+GGG - chr2_3:46581601-46581620 Msa0294590:intron 40.0%
TAAACCAACCACTCAATAGC+AGG + chr2_3:46581813-46581832 None:intergenic 40.0%
TCATGTTCTTACAAGCGATG+TGG + chr2_3:46582019-46582038 None:intergenic 40.0%
TTGGCTGTGATTTGATGAGT+AGG - chr2_3:46582138-46582157 Msa0294590:intron 40.0%
CATGAGAGCGAATATACTCA+TGG + chr2_3:46582166-46582185 None:intergenic 40.0%
AGATAGAGATGTGCATGTGT+TGG + chr2_3:46582227-46582246 None:intergenic 40.0%
ACTGCATAAACTGCACTTGT+CGG - chr2_3:46582424-46582443 Msa0294590:intron 40.0%
CTAGTTTATCTCTTTCTCCG+AGG + chr2_3:46582993-46583012 None:intergenic 40.0%
GTAGCAAGTATAGCTCCAAA+AGG - chr2_3:46583321-46583340 Msa0294590:CDS 40.0%
ATTGGTGAGTAGAACGACTT+TGG - chr2_3:46583504-46583523 Msa0294590:CDS 40.0%
ATTGATTGTCCCCAAAGCTT+AGG - chr2_3:46583677-46583696 Msa0294590:CDS 40.0%
CAGCTCAAACATGATACTAG+AGG + chr2_3:46583861-46583880 None:intergenic 40.0%
TTGCTTTCGTTACATACCAC+TGG - chr2_3:46583969-46583988 Msa0294590:CDS 40.0%
AAGACAAGCATAAACACCAG+TGG + chr2_3:46583988-46584007 None:intergenic 40.0%
!! ACCTTTAAGAGGTATTCGCT+TGG - chr2_3:46584031-46584050 Msa0294590:CDS 40.0%
ACCAAGCGAATACCTCTTAA+AGG + chr2_3:46584035-46584054 None:intergenic 40.0%
!! TTTAAGAGGTATTCGCTTGG+TGG - chr2_3:46584034-46584053 Msa0294590:CDS 40.0%
GGATACTTGATGTAGCACTT+CGG - chr2_3:46584097-46584116 Msa0294590:CDS 40.0%
GATGTAGCACTTCGGTTAAT+AGG - chr2_3:46584105-46584124 Msa0294590:CDS 40.0%
CTGCTTGAAAAGGGTTAACT+AGG - chr2_3:46584154-46584173 Msa0294590:CDS 40.0%
TGAAAAGGGTTAACTAGGGA+AGG - chr2_3:46584159-46584178 Msa0294590:CDS 40.0%
GAAAAGGGTTAACTAGGGAA+GGG - chr2_3:46584160-46584179 Msa0294590:CDS 40.0%
! GTTAGAGTGTTTAAGTGGCT+TGG - chr2_3:46584314-46584333 Msa0294590:CDS 40.0%
CTTAAAAGCTAGCTATCGAG+AGG + chr2_3:46584346-46584365 None:intergenic 40.0%
!!! CTCTCGATAGCTAGCTTTTA+AGG - chr2_3:46584344-46584363 Msa0294590:CDS 40.0%
GATAAGTATCCAAGGACTTG+GGG + chr2_3:46584377-46584396 None:intergenic 40.0%
CTGATAAGTATCCAAGGACT+TGG + chr2_3:46584379-46584398 None:intergenic 40.0%
! ATTTCACCGTAAGGCTTGTT+AGG - chr2_3:46584483-46584502 Msa0294590:CDS 40.0%
GTAACTCCTAACAAGCCTTA+CGG + chr2_3:46584492-46584511 None:intergenic 40.0%
AGTTGGGGAAAGAGAAAATC+AGG - chr2_3:46584520-46584539 Msa0294590:CDS 40.0%
GTTGGGGAAAGAGAAAATCA+GGG - chr2_3:46584521-46584540 Msa0294590:CDS 40.0%
AGTAAACCTAGCCTAGAATG+CGG - chr2_3:46584586-46584605 Msa0294590:CDS 40.0%
TATTAACCGCATTCTAGGCT+AGG + chr2_3:46584595-46584614 None:intergenic 40.0%
!! CTTGACTTTTTGGTATGTGC+AGG - chr2_3:46584740-46584759 Msa0294590:CDS 40.0%
ATACTGTACTCTCCAATCTC+AGG - chr2_3:46584764-46584783 Msa0294590:CDS 40.0%
! ACTGAGCAGAATGAACCTTT+TGG + chr2_3:46584854-46584873 None:intergenic 40.0%
AAAAGGTTCATTCTGCTCAG+TGG - chr2_3:46584853-46584872 Msa0294590:CDS 40.0%
! CTAAGGCTTTAACTTCCATG+TGG - chr2_3:46585132-46585151 Msa0294590:CDS 40.0%
AATCAGACCTGAAAACCACA+TGG + chr2_3:46585150-46585169 None:intergenic 40.0%
TACTTATTTGCAGAGTGCAC+GGG - chr2_3:46585497-46585516 Msa0294590:CDS 40.0%
!! AAGGGAGTGTTAATCCAACT+GGG + chr2_3:46585690-46585709 None:intergenic 40.0%
AAGCCAAAAGAAGCAAATGC+AGG + chr2_3:46585982-46586001 None:intergenic 40.0%
!!! CTTCTTTTGGCTTTCTCTCA+TGG - chr2_3:46585989-46586008 Msa0294590:intron 40.0%
TGTCAAGGTAGAAAAGCTTG+TGG - chr2_3:46586060-46586079 Msa0294590:intron 40.0%
TAGGCGACATTGAAAAACGA+AGG - chr2_3:46586140-46586159 Msa0294590:intron 40.0%
AATCATTGCCGCTAGATGTT+GGG - chr2_3:46586576-46586595 Msa0294590:five_prime_UTR 40.0%
!! ATCTCTGCTGATTTCACTGT+CGG + chr2_3:46586678-46586697 None:intergenic 40.0%
CTAGCCGTTGAAATTGCATT+AGG - chr2_3:46586707-46586726 Msa0294590:five_prime_UTR 40.0%
ACAGAGACAAGTAGGTCTTT+CGG - chr2_3:46586743-46586762 Msa0294590:five_prime_UTR 40.0%
! GAGAAAATCACCCCTTTTGA+AGG - chr2_3:46586770-46586789 Msa0294590:five_prime_UTR 40.0%
!! CCCTTTTGAAGGAAACAATG+TGG - chr2_3:46586781-46586800 Msa0294590:five_prime_UTR 40.0%
TCTTTGTTGGCACTTGTTCT+TGG + chr2_3:46586812-46586831 None:intergenic 40.0%
AGAACAAGTGCCAACAAAGA+TGG - chr2_3:46586812-46586831 Msa0294590:five_prime_UTR 40.0%
AGATTCAGTGCCATCTTTGT+TGG + chr2_3:46586825-46586844 None:intergenic 40.0%
! AACAAAGATGGCACTGAATC+TGG - chr2_3:46586824-46586843 Msa0294590:five_prime_UTR 40.0%
! ATCTGGTGGAAGAGTTTTTG+AGG - chr2_3:46586841-46586860 Msa0294590:five_prime_UTR 40.0%
!! TTGGTGGGTGAACTGTTTTG+TGG - chr2_3:46577742-46577761 Msa0294590:CDS 45.0%
! CTTGAGAATCTGAGTTGGGT+AGG - chr2_3:46577775-46577794 Msa0294590:CDS 45.0%
CCAATGCAGTCTACGAATCT+AGG + chr2_3:46578515-46578534 None:intergenic 45.0%
CCTAGATTCGTAGACTGCAT+TGG - chr2_3:46578512-46578531 Msa0294590:CDS 45.0%
GAAACGTGTTAATTGTGGGC+AGG - chr2_3:46578620-46578639 Msa0294590:CDS 45.0%
TTTCTTCAGCCAAAATGCCC+TGG + chr2_3:46578872-46578891 None:intergenic 45.0%
! AGTCAGAGGCGTGTAATTTC+TGG - chr2_3:46579104-46579123 Msa0294590:CDS 45.0%
TTCAAGATTTACCCATCCCG+AGG - chr2_3:46579217-46579236 Msa0294590:intron 45.0%
ATTAATGTCCTCCTCGGGAT+GGG + chr2_3:46579231-46579250 None:intergenic 45.0%
CATTCCAATGAGACTGCTCT+GGG - chr2_3:46579260-46579279 Msa0294590:intron 45.0%
ATTCCAATGAGACTGCTCTG+GGG - chr2_3:46579261-46579280 Msa0294590:intron 45.0%
TGTAGTAGCACAAGTCAGGT+TGG + chr2_3:46579432-46579451 None:intergenic 45.0%
AGTCTGTAGTAGCACAAGTC+AGG + chr2_3:46579436-46579455 None:intergenic 45.0%
AAATGGGAACATCCCGAAAG+AGG - chr2_3:46579604-46579623 Msa0294590:intron 45.0%
TGAGTCTCCCTTAAGAACTG+AGG - chr2_3:46579724-46579743 Msa0294590:CDS 45.0%
AGAACTGAGGAAATGCCTGA+AGG - chr2_3:46579737-46579756 Msa0294590:CDS 45.0%
GAACTGAGGAAATGCCTGAA+GGG - chr2_3:46579738-46579757 Msa0294590:CDS 45.0%
CTCAAATTCATTGTCCCAGC+TGG - chr2_3:46579784-46579803 Msa0294590:CDS 45.0%
ATGAAACTGCAGTAAGGGAC+GGG + chr2_3:46579822-46579841 None:intergenic 45.0%
AGTTGCTTACGATGTCAGGA+TGG - chr2_3:46579849-46579868 Msa0294590:CDS 45.0%
ACGATGTCAGGATGGTCTAT+TGG - chr2_3:46579857-46579876 Msa0294590:CDS 45.0%
CGATGTCAGGATGGTCTATT+GGG - chr2_3:46579858-46579877 Msa0294590:CDS 45.0%
!! GGTCTATTGGGAAGCATCAA+CGG - chr2_3:46579870-46579889 Msa0294590:CDS 45.0%
TGTAACATATGGAGGCCGTA+AGG - chr2_3:46580006-46580025 Msa0294590:intron 45.0%
!! AAAGGTCGGTGCTCTGAAAA+GGG - chr2_3:46580177-46580196 Msa0294590:intron 45.0%
TTCTCCAAGGCTGAATCAAC+TGG + chr2_3:46580295-46580314 None:intergenic 45.0%
AGTGTGAGACGTATTCTCCA+AGG + chr2_3:46580308-46580327 None:intergenic 45.0%
AAGAGTCGCAGAAAATGGCT+TGG + chr2_3:46580351-46580370 None:intergenic 45.0%
CAATGCACAAGCAGGTAAAG+AGG + chr2_3:46580542-46580561 None:intergenic 45.0%
CTCTTTACCTGCTTGTGCAT+TGG - chr2_3:46580540-46580559 Msa0294590:intron 45.0%
AGAGGGGAGGAAAATCTCAA+TGG - chr2_3:46580726-46580745 Msa0294590:intron 45.0%
TTGATCCCAGTATGTCACTG+TGG + chr2_3:46580861-46580880 None:intergenic 45.0%
GAGCTAAATCCGGCAAATCA+AGG - chr2_3:46581157-46581176 Msa0294590:intron 45.0%
GCTAAATCCGGCAAATCAAG+GGG - chr2_3:46581159-46581178 Msa0294590:intron 45.0%
!! TCTCAAACCCCTTGATTTGC+CGG + chr2_3:46581169-46581188 None:intergenic 45.0%
AAAGCTATAAAGGCCGTTGC+AGG - chr2_3:46581196-46581215 Msa0294590:intron 45.0%
CTGCCAAGGAATCCTTGTAA+TGG - chr2_3:46581222-46581241 Msa0294590:intron 45.0%
CCTCCATTACAAGGATTCCT+TGG + chr2_3:46581228-46581247 None:intergenic 45.0%
CCAAGGAATCCTTGTAATGG+AGG - chr2_3:46581225-46581244 Msa0294590:intron 45.0%
TTGTGCTTCCCTCCATTACA+AGG + chr2_3:46581237-46581256 None:intergenic 45.0%
! GAGGGAAGCACAATATGGAT+GGG - chr2_3:46581244-46581263 Msa0294590:intron 45.0%
GTCCTGGTTGATTGAGAATG+AGG - chr2_3:46581299-46581318 Msa0294590:intron 45.0%
GACCTCATTCTCAATCAACC+AGG + chr2_3:46581304-46581323 None:intergenic 45.0%
GATGGCAAGATCACCAAAGA+CGG - chr2_3:46581381-46581400 Msa0294590:intron 45.0%
ATTCAGCTGACCAAGCTTGA+AGG + chr2_3:46581533-46581552 None:intergenic 45.0%
AAGCCAGGTGAAAAGTAGAG+GGG + chr2_3:46581668-46581687 None:intergenic 45.0%
CAAGCCAGGTGAAAAGTAGA+GGG + chr2_3:46581669-46581688 None:intergenic 45.0%
ACAAGCCAGGTGAAAAGTAG+AGG + chr2_3:46581670-46581689 None:intergenic 45.0%
CAAACCTGCTATTGAGTGGT+TGG - chr2_3:46581806-46581825 Msa0294590:intron 45.0%
CTCTCATGATATAGACCTGC+TGG - chr2_3:46582178-46582197 Msa0294590:intron 45.0%
AGCAATTCATTCATGCCAGC+AGG + chr2_3:46582196-46582215 None:intergenic 45.0%
!! TGTGTCATTCTTCTGAGGCA+GGG + chr2_3:46582361-46582380 None:intergenic 45.0%
!! ATGTGTCATTCTTCTGAGGC+AGG + chr2_3:46582362-46582381 None:intergenic 45.0%
AACTGCACTTGTCGGATTTG+TGG - chr2_3:46582432-46582451 Msa0294590:intron 45.0%
! AAGGAGCTGTTTCAGACACT+TGG - chr2_3:46583013-46583032 Msa0294590:CDS 45.0%
TTGTAGTCAAAGTTGTCGGG+AGG - chr2_3:46583038-46583057 Msa0294590:CDS 45.0%
ATACCCACTGCCTAAGCTTT+GGG + chr2_3:46583690-46583709 None:intergenic 45.0%
!!! AGCTCTTTTGGCTTGAAGTG+TGG - chr2_3:46583728-46583747 Msa0294590:CDS 45.0%
TGAAGTGTGGACAAATGCAC+TGG - chr2_3:46583741-46583760 Msa0294590:CDS 45.0%
ACACGGTAGAAGAGTAGAGT+GGG + chr2_3:46583767-46583786 None:intergenic 45.0%
! GGTATTCGCTTGGTGGAATA+AGG - chr2_3:46584041-46584060 Msa0294590:CDS 45.0%
TCGGTATCAAAGCTAGTCAC+TGG - chr2_3:46584131-46584150 Msa0294590:CDS 45.0%
! TAGTCACTGGCTGCTTGAAA+AGG - chr2_3:46584144-46584163 Msa0294590:CDS 45.0%
! AGTCACTGGCTGCTTGAAAA+GGG - chr2_3:46584145-46584164 Msa0294590:CDS 45.0%
GCACTCTACGACTCTTTACT+CGG + chr2_3:46584199-46584218 None:intergenic 45.0%
!!! CGATAGCTAGCTTTTAAGGG+AGG - chr2_3:46584348-46584367 Msa0294590:CDS 45.0%
AGAAAATCAGGGACAGCAGA+TGG - chr2_3:46584532-46584551 Msa0294590:CDS 45.0%
GTCTCGAAGTTAGTACGCTA+CGG + chr2_3:46584650-46584669 None:intergenic 45.0%
TGTACTCTCCAATCTCAGGT+TGG - chr2_3:46584768-46584787 Msa0294590:CDS 45.0%
GTACTCTCCAATCTCAGGTT+GGG - chr2_3:46584769-46584788 Msa0294590:CDS 45.0%
TAACTAGCCCAACCTGAGAT+TGG + chr2_3:46584779-46584798 None:intergenic 45.0%
!! TATGCATCTAAGAAGCGTCC+AGG + chr2_3:46584823-46584842 None:intergenic 45.0%
ACACTCCTCCATGATGGTAA+GGG + chr2_3:46584919-46584938 None:intergenic 45.0%
AACACTCCTCCATGATGGTA+AGG + chr2_3:46584920-46584939 None:intergenic 45.0%
! AGGGTTTTACACAGTGGTGT+TGG - chr2_3:46585189-46585208 Msa0294590:CDS 45.0%
! CACAGTGGTGTTGGAAAAAC+AGG - chr2_3:46585198-46585217 Msa0294590:CDS 45.0%
!! AATCAGAGGCATCTCTGCAA+CGG + chr2_3:46585527-46585546 None:intergenic 45.0%
CTCTGATTGCAACTTGCAGT+CGG - chr2_3:46585539-46585558 Msa0294590:CDS 45.0%
TGTTTCAGTTTCACCCCAGT+TGG - chr2_3:46585673-46585692 Msa0294590:CDS 45.0%
!! AGGGAGTGTTAATCCAACTG+GGG + chr2_3:46585689-46585708 None:intergenic 45.0%
!! CAAGGGAGTGTTAATCCAAC+TGG + chr2_3:46585691-46585710 None:intergenic 45.0%
TTGCGTGGGTCTCATTAAAC+AGG - chr2_3:46585816-46585835 Msa0294590:five_prime_UTR 45.0%
TGCGTGGGTCTCATTAAACA+GGG - chr2_3:46585817-46585836 Msa0294590:five_prime_UTR 45.0%
TGGGTCTCATTAAACAGGGA+GGG - chr2_3:46585821-46585840 Msa0294590:five_prime_UTR 45.0%
TCTCATTAAACAGGGAGGGA+TGG - chr2_3:46585825-46585844 Msa0294590:five_prime_UTR 45.0%
AGGTATGAATCCAAAGCCCT+TGG + chr2_3:46586119-46586138 None:intergenic 45.0%
!! GGCTTTGGATTCATACCTGT+AGG - chr2_3:46586121-46586140 Msa0294590:intron 45.0%
!! CGTTTTTCAATGTCGCCTAC+AGG + chr2_3:46586139-46586158 None:intergenic 45.0%
AAAGTAGGTACCTGCTCTGA+AGG - chr2_3:46586539-46586558 Msa0294590:five_prime_UTR 45.0%
TATGTCCATTCCTTCAGAGC+AGG + chr2_3:46586552-46586571 None:intergenic 45.0%
GAATCATTGCCGCTAGATGT+TGG - chr2_3:46586575-46586594 Msa0294590:five_prime_UTR 45.0%
TGACTTAGCACCAACTTCGT+TGG + chr2_3:46586612-46586631 None:intergenic 45.0%
!! GGTTGATTTTTGCAGTCCAC+AGG + chr2_3:46586644-46586663 None:intergenic 45.0%
! AAAGATGGCACTGAATCTGG+TGG - chr2_3:46586827-46586846 Msa0294590:five_prime_UTR 45.0%
! GTGTCGTGCAAGACATTTTC+AGG - chr2_3:46586923-46586942 Msa0294590:five_prime_UTR 45.0%
!!! ATTGTTTTATTTATTTATTT+TGG - chr2_3:46581778-46581797 Msa0294590:intron 5.0%
!!! TTGTTTTATTTATTTATTTT+GGG - chr2_3:46581779-46581798 Msa0294590:intron 5.0%
! GAATCTGAGTTGGGTAGGGT+AGG - chr2_3:46577780-46577799 Msa0294590:CDS 50.0%
! TGAGTTGGGTAGGGTAGGAT+TGG - chr2_3:46577785-46577804 Msa0294590:CDS 50.0%
!! GTTCGTCAACCAGGGCATTT+TGG - chr2_3:46578860-46578879 Msa0294590:intron 50.0%
AAGATTTACCCATCCCGAGG+AGG - chr2_3:46579220-46579239 Msa0294590:intron 50.0%
CATTAATGTCCTCCTCGGGA+TGG + chr2_3:46579232-46579251 None:intergenic 50.0%
GCATTCCAATGAGACTGCTC+TGG - chr2_3:46579259-46579278 Msa0294590:intron 50.0%
AGTTGCTTCTCCTGTATCCC+AGG - chr2_3:46579643-46579662 Msa0294590:intron 50.0%
TGAAACTGCAGTAAGGGACG+GGG + chr2_3:46579821-46579840 None:intergenic 50.0%
GTGCAGTTGCTTACGATGTC+AGG - chr2_3:46579845-46579864 Msa0294590:CDS 50.0%
CATATGGAGGCCGTAAGGAA+TGG - chr2_3:46580011-46580030 Msa0294590:intron 50.0%
!! GAAAGGTCGGTGCTCTGAAA+AGG - chr2_3:46580176-46580195 Msa0294590:intron 50.0%
!! AAGGTCGGTGCTCTGAAAAG+GGG - chr2_3:46580178-46580197 Msa0294590:intron 50.0%
!! TGCTCTGAAAAGGGGAGAAG+AGG - chr2_3:46580186-46580205 Msa0294590:intron 50.0%
! TGCTCCAGTTGATTCAGCCT+TGG - chr2_3:46580288-46580307 Msa0294590:intron 50.0%
AAATCGGTCCGAATGCAGTG+AGG - chr2_3:46580702-46580721 Msa0294590:intron 50.0%
TCCGAATGCAGTGAGGAAGA+GGG - chr2_3:46580709-46580728 Msa0294590:intron 50.0%
GATCAGGTGCAGTCACTGAA+TGG - chr2_3:46580889-46580908 Msa0294590:intron 50.0%
ATGTGGCACTCAGACTGTGT+TGG - chr2_3:46580918-46580937 Msa0294590:intron 50.0%
! GGAGGGAAGCACAATATGGA+TGG - chr2_3:46581243-46581262 Msa0294590:intron 50.0%
CACTTTGCCTCCTTCAAGCT+TGG - chr2_3:46581520-46581539 Msa0294590:intron 50.0%
GGTCAGCTGAATACAAAGCC+AGG - chr2_3:46581541-46581560 Msa0294590:intron 50.0%
ACAAGCGATGTGGCCTATGA+TGG + chr2_3:46582009-46582028 None:intergenic 50.0%
TATGCAGTACCAGTTGCCGT+CGG + chr2_3:46582412-46582431 None:intergenic 50.0%
TACCCACTGCCTAAGCTTTG+GGG + chr2_3:46583689-46583708 None:intergenic 50.0%
GATACCCACTGCCTAAGCTT+TGG + chr2_3:46583691-46583710 None:intergenic 50.0%
CCAAAAGAGCTCTCGTGTGA+GGG + chr2_3:46583719-46583738 None:intergenic 50.0%
CACACGGTAGAAGAGTAGAG+TGG + chr2_3:46583768-46583787 None:intergenic 50.0%
! ATTAGAATGGGGGCATGGCA+AGG - chr2_3:46583806-46583825 Msa0294590:CDS 50.0%
TTAACTAGGGAAGGGCTGAC+CGG - chr2_3:46584168-46584187 Msa0294590:CDS 50.0%
GACTCTTTACTCGGCCTTTC+CGG + chr2_3:46584190-46584209 None:intergenic 50.0%
TCTGAGAGCCTACATCTCAG+TGG + chr2_3:46584224-46584243 None:intergenic 50.0%
ACTGAGATGTAGGCTCTCAG+AGG - chr2_3:46584223-46584242 Msa0294590:CDS 50.0%
GCAGTGCTACGATAGGAACT+TGG - chr2_3:46584245-46584264 Msa0294590:CDS 50.0%
TACGCTACGGCTAATAGCTG+TGG + chr2_3:46584637-46584656 None:intergenic 50.0%
AAATTGCTGATGGCTTCGCC+TGG - chr2_3:46584802-46584821 Msa0294590:CDS 50.0%
! TGCTCAGTGGTTTGCCCTAA+AGG - chr2_3:46584866-46584885 Msa0294590:CDS 50.0%
AGCTGTTGCCCTTACCATCA+TGG - chr2_3:46584908-46584927 Msa0294590:CDS 50.0%
TGTTGCCCTTACCATCATGG+AGG - chr2_3:46584911-46584930 Msa0294590:CDS 50.0%
CACGAAACACTCCTCCATGA+TGG + chr2_3:46584925-46584944 None:intergenic 50.0%
CGACTGCAAGTTGCAATCAG+AGG + chr2_3:46585541-46585560 None:intergenic 50.0%
AGCAGTGCACTTTCTGTTGC+TGG - chr2_3:46585787-46585806 Msa0294590:five_prime_UTR 50.0%
GCAGTGCACTTTCTGTTGCT+GGG - chr2_3:46585788-46585807 Msa0294590:five_prime_UTR 50.0%
TGTTGCTGGGCAAAATTGCG+TGG - chr2_3:46585801-46585820 Msa0294590:five_prime_UTR 50.0%
GTTGCTGGGCAAAATTGCGT+GGG - chr2_3:46585802-46585821 Msa0294590:five_prime_UTR 50.0%
GTGGGTCTCATTAAACAGGG+AGG - chr2_3:46585820-46585839 Msa0294590:five_prime_UTR 50.0%
GCTTGTGGTATCAGCCATTC+CGG - chr2_3:46586075-46586094 Msa0294590:intron 50.0%
GGTATCAGCCATTCCGGATT+TGG - chr2_3:46586081-46586100 Msa0294590:intron 50.0%
ATCAGCCATTCCGGATTTGG+TGG - chr2_3:46586084-46586103 Msa0294590:intron 50.0%
AGTCTCCACCAAATCCGGAA+TGG + chr2_3:46586092-46586111 None:intergenic 50.0%
!! TTCCGGATTTGGTGGAGACT+TGG - chr2_3:46586092-46586111 Msa0294590:intron 50.0%
GTCCAAGTCTCCACCAAATC+CGG + chr2_3:46586097-46586116 None:intergenic 50.0%
TTTGGTGGAGACTTGGACCA+AGG - chr2_3:46586099-46586118 Msa0294590:intron 50.0%
TTGGTGGAGACTTGGACCAA+GGG - chr2_3:46586100-46586119 Msa0294590:intron 50.0%
!! AGGTACCTGCTCTGAAGGAA+TGG - chr2_3:46586544-46586563 Msa0294590:five_prime_UTR 50.0%
AACGCAGCTACCAACGAAGT+TGG - chr2_3:46586599-46586618 Msa0294590:five_prime_UTR 50.0%
TAAGTCAGAGTGTGAGCCTG+TGG - chr2_3:46586625-46586644 Msa0294590:five_prime_UTR 50.0%
ACACCCCAGAGCAGTCTCAT+TGG + chr2_3:46579267-46579286 None:intergenic 55.0%
TCCTGTATCCCAGGAGAGCT+CGG - chr2_3:46579652-46579671 Msa0294590:intron 55.0%
ATTGTCCCAGCTGGACCAAG+AGG - chr2_3:46579793-46579812 Msa0294590:CDS 55.0%
!! GGAAGCATCAACGGCCTTCT+AGG - chr2_3:46579879-46579898 Msa0294590:CDS 55.0%
AGCATCAACGGCCTTCTAGG+CGG - chr2_3:46579882-46579901 Msa0294590:CDS 55.0%
GTGCTACCCAATGCACAAGC+AGG + chr2_3:46580550-46580569 None:intergenic 55.0%
GTCCGAATGCAGTGAGGAAG+AGG - chr2_3:46580708-46580727 Msa0294590:intron 55.0%
CCCCTCTTCCTCACTGCATT+CGG + chr2_3:46580713-46580732 None:intergenic 55.0%
CCGAATGCAGTGAGGAAGAG+GGG - chr2_3:46580710-46580729 Msa0294590:intron 55.0%
AATGCAGTGAGGAAGAGGGG+AGG - chr2_3:46580713-46580732 Msa0294590:intron 55.0%
TCCTTGGCAGCAACCTGCAA+CGG + chr2_3:46581212-46581231 None:intergenic 55.0%
GGGAAAGGACTCTCTTGTCC+TGG - chr2_3:46581283-46581302 Msa0294590:intron 55.0%
CAGCTGACCAAGCTTGAAGG+AGG + chr2_3:46581530-46581549 None:intergenic 55.0%
GATGATTCGTGCGGGATGTG+TGG - chr2_3:46581609-46581628 Msa0294590:intron 55.0%
!! CTGCCCCTCTACTTTTCACC+TGG - chr2_3:46581662-46581681 Msa0294590:CDS 55.0%
GTACATCAGGAGATCCCCGA+CGG - chr2_3:46582393-46582412 Msa0294590:intron 55.0%
ATGCAGTACCAGTTGCCGTC+GGG + chr2_3:46582411-46582430 None:intergenic 55.0%
TGTCCCCAAAGCTTAGGCAG+TGG - chr2_3:46583683-46583702 Msa0294590:CDS 55.0%
GTCCCCAAAGCTTAGGCAGT+GGG - chr2_3:46583684-46583703 Msa0294590:CDS 55.0%
! CCCTCACACGAGAGCTCTTT+TGG - chr2_3:46583716-46583735 Msa0294590:CDS 55.0%
GCCAAAAGAGCTCTCGTGTG+AGG + chr2_3:46583720-46583739 None:intergenic 55.0%
GAGTGCAGCCACTGAGATGT+AGG - chr2_3:46584213-46584232 Msa0294590:CDS 55.0%
CTCAGAGGCAGTGCTACGAT+AGG - chr2_3:46584238-46584257 Msa0294590:CDS 55.0%
CCTCTTCGATTGAGCTCACG+AGG + chr2_3:46585591-46585610 None:intergenic 55.0%
CCTCGTGAGCTCAATCGAAG+AGG - chr2_3:46585588-46585607 Msa0294590:CDS 55.0%
GAGACTTGGACCAAGGGCTT+TGG - chr2_3:46586106-46586125 Msa0294590:intron 55.0%
GCTGCGTTCCCAACATCTAG+CGG + chr2_3:46586587-46586606 None:intergenic 55.0%
TCACTGTCGGCCCTATTGTC+TGG + chr2_3:46586665-46586684 None:intergenic 55.0%
CCTGTTTGCCGAGCTCTCCT+GGG + chr2_3:46579663-46579682 None:intergenic 60.0%
GGGATCCTCTTGGTCCAGCT+GGG + chr2_3:46579801-46579820 None:intergenic 60.0%
GTAAGGGACGGGGATCCTCT+TGG + chr2_3:46579811-46579830 None:intergenic 60.0%
ATCAACGGCCTTCTAGGCGG+TGG - chr2_3:46579885-46579904 Msa0294590:CDS 60.0%
GACTCCATCCACCGCCTAGA+AGG + chr2_3:46579896-46579915 None:intergenic 60.0%
ACATAGCAGCGGTCTCTGGC+TGG + chr2_3:46580102-46580121 None:intergenic 60.0%
GCCAGAGACCGCTGCTATGT+TGG - chr2_3:46580102-46580121 Msa0294590:intron 60.0%
GCCAACATAGCAGCGGTCTC+TGG + chr2_3:46580106-46580125 None:intergenic 60.0%
TTCGTGCGGGATGTGTGGTG+AGG - chr2_3:46581614-46581633 Msa0294590:intron 60.0%
TCGTGCGGGATGTGTGGTGA+GGG - chr2_3:46581615-46581634 Msa0294590:intron 60.0%
CCTGAGCGGACAAACAAGCC+AGG + chr2_3:46581683-46581702 None:intergenic 60.0%
!! CCTGGCTTGTTTGTCCGCTC+AGG - chr2_3:46581680-46581699 Msa0294590:CDS 60.0%
CCGAGTGCAACTGACCTGAG+CGG + chr2_3:46581697-46581716 None:intergenic 60.0%
CCGCTCAGGTCAGTTGCACT+CGG - chr2_3:46581694-46581713 Msa0294590:CDS 60.0%
TCCAGGGTTTCGCGCAGGAA+GGG + chr2_3:46581900-46581919 None:intergenic 60.0%
CTATCTCCAGGGTTTCGCGC+AGG + chr2_3:46581905-46581924 None:intergenic 60.0%
TGCAGTACCAGTTGCCGTCG+GGG + chr2_3:46582410-46582429 None:intergenic 60.0%
TAGGGAAGGGCTGACCGGAA+AGG - chr2_3:46584173-46584192 Msa0294590:CDS 60.0%
GGGAGGATTCCCCAAGTCCT+TGG - chr2_3:46584365-46584384 Msa0294590:CDS 60.0%
TGCAGTCGGTATCGTCGCCA+AGG - chr2_3:46585553-46585572 Msa0294590:CDS 60.0%
CGATTGAGCTCACGAGGCGT+CGG + chr2_3:46585585-46585604 None:intergenic 60.0%
GCCGAGCTCTCCTGGGATAC+AGG + chr2_3:46579656-46579675 None:intergenic 65.0%
CCCAGGAGAGCTCGGCAAAC+AGG - chr2_3:46579660-46579679 Msa0294590:intron 65.0%
GCCTGTTTGCCGAGCTCTCC+TGG + chr2_3:46579664-46579683 None:intergenic 65.0%
GGGGATCCTCTTGGTCCAGC+TGG + chr2_3:46579802-46579821 None:intergenic 65.0%
ACGGCCTTCTAGGCGGTGGA+TGG - chr2_3:46579889-46579908 Msa0294590:CDS 65.0%
GCCGTTGCAGGTTGCTGCCA+AGG - chr2_3:46581208-46581227 Msa0294590:intron 65.0%
TGCGGGATGTGTGGTGAGGG+AGG - chr2_3:46581618-46581637 Msa0294590:intron 65.0%
TCCCTTCCTGCGCGAAACCC+TGG - chr2_3:46581896-46581915 Msa0294590:intron 65.0%
CTCCAGGGTTTCGCGCAGGA+AGG + chr2_3:46581901-46581920 None:intergenic 65.0%
AGGAGATCCCCGACGGCAAC+TGG - chr2_3:46582400-46582419 Msa0294590:intron 65.0%
!! CGAGGCGTCGGCACATTCCT+TGG + chr2_3:46585573-46585592 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 46577463 46587248 46577463 ID=Msa0294590;Name=Msa0294590
chr2_3 mRNA 46577463 46587248 46577463 ID=Msa0294590-mRNA-1;Parent=Msa0294590;Name=Msa0294590-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1150|1|1|1|0.87|0.77|9|212|1352
chr2_3 exon 46577463 46578213 46577463 ID=Msa0294590-mRNA-1:exon:14526;Parent=Msa0294590-mRNA-1
chr2_3 exon 46578470 46578662 46578470 ID=Msa0294590-mRNA-1:exon:14525;Parent=Msa0294590-mRNA-1
chr2_3 exon 46579102 46579201 46579102 ID=Msa0294590-mRNA-1:exon:14524;Parent=Msa0294590-mRNA-1
chr2_3 exon 46579463 46579549 46579463 ID=Msa0294590-mRNA-1:exon:14523;Parent=Msa0294590-mRNA-1
chr2_3 exon 46579708 46579949 46579708 ID=Msa0294590-mRNA-1:exon:14522;Parent=Msa0294590-mRNA-1
chr2_3 exon 46581652 46581734 46581652 ID=Msa0294590-mRNA-1:exon:14521;Parent=Msa0294590-mRNA-1
chr2_3 exon 46582186 46582309 46582186 ID=Msa0294590-mRNA-1:exon:14520;Parent=Msa0294590-mRNA-1
chr2_3 exon 46583010 46585958 46583010 ID=Msa0294590-mRNA-1:exon:14519;Parent=Msa0294590-mRNA-1
chr2_3 exon 46586357 46587248 46586357 ID=Msa0294590-mRNA-1:exon:14518;Parent=Msa0294590-mRNA-1
chr2_3 five_prime_UTR 46586357 46587248 46586357 ID=Msa0294590-mRNA-1:five_prime_utr;Parent=Msa0294590-mRNA-1
chr2_3 five_prime_UTR 46585701 46585958 46585701 ID=Msa0294590-mRNA-1:five_prime_utr;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46583010 46585700 46583010 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46582186 46582309 46582186 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46581652 46581734 46581652 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46579708 46579949 46579708 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46579463 46579549 46579463 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46579102 46579201 46579102 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46578470 46578662 46578470 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 CDS 46577675 46578213 46577675 ID=Msa0294590-mRNA-1:cds;Parent=Msa0294590-mRNA-1
chr2_3 three_prime_UTR 46577463 46577674 46577463 ID=Msa0294590-mRNA-1:three_prime_utr;Parent=Msa0294590-mRNA-1
Gene Sequence

>Msa0294590

ATGGAACATTTATGCGATGATAACTTTGAAGGATCTAATGAAGAAAGACAGATTTTTACAGAGGTCTTTTTTGGTGATGACACTTTTCAGTCTAGTCAGAGGCGTGTAATTTCTGGAGCCATCAACCTTGAACATGAATCCACGAAAAACACATTGAAGTCATTTGGCTCTAGTAATGAAAACTCGGTCATATGGCGTCCCTCGTCTTCAAGATTTACCCATCCCGAGGAGGACATTAATGCAATTCAGCATTCCAATGAGACTGCTCTGGGGTGTTTGCCAGAGAGTTTAACTTGTGAAGATCAGAATGATGAAATTGTAAATGTCAAACGTATGAAATTTTCTCTGCACGAACTTCCTTGTAGTAGATCTAATTCAGATGTTTTGGGTTCATCTGGAATTCCAAAAGTAGTAATTTCCAACCTGACTTGTGCTACTACAGACTGTGATAGTGACTCGATTGCATTTCGTACAGTTGAATCATCTAAACACGGTGTGATATCTAGTTGCTATCTATTGAAGCATAACTTGGTACAGAAAATTCATGCTTCTAATGATGATGCAGATGTTACAGATTGTAAATCTAAAACAGAAAATGGGAACATCCCGAAAGAGGTGTCTGTAAGTAAGGCAGTTGCTTCTCCTGTATCCCAGGAGAGCTCGGCAAACAGGCTAGTAGTGACGAGTCCATCAATCACTGTTGTGAAGAAGTCTGAGTCTCCCTTAAGAACTGAGGAAATGCCTGAAGGGTTTCAATCTTCTAATATGGTTATCTCAAATTCATTGTCCCAGCTGGACCAAGAGGATCCCCGTCCCTTACTGCAGTTTCATATCGTGCAGTTGCTTACGATGTCAGGATGGTCTATTGGGAAGCATCAACGGCCTTCTAGGCGGTGGATGGAGTCATTCTACAAGACACCAAAGGGAAAAATTATGCGGGAATTTACAAAAGTTTGGAGATTATGTGGCCAACTTTTGTCTGTTGAAAAGTGCAATGTAACATATGGAGGCCGTAAGGAATGGACCAATATTAGCGATTTTTGGTCCGATCTATCGAGTGCACTGAAAAATGTTGAAAAATTAAAAAACCAGCCAGAGACCGCTGCTATGTTGGCTTATCAATGGTGGATTATGGATCCTTTTGTAGTAGTTATACATTTTGATAGAAAGGTCGGTGCTCTGAAAAGGGGAGAAGAGGTTATAAAAGCAAGTTGTAGTTTAGTTTCTAGTAAGGGTAAAATGGCATATTCTTCAAAAAAAAAGGGTAAAATGGCATATGCTCCAGTTGATTCAGCCTTGGAGAATACGTCTCACACTCTTTCTGAACAAAAGCACGACCAAGCCATTTTCTGCGACTCTTCAACAGCCACCAGAACCACAGAAATATCTGCTTTTATGATAAACAGTCATGCTTGTAAACAGACATCTGACAGTAACCAAGAAGATATGTATGTCGAAGAACATAAACCAAACATCATAGAAAACCGATTAATGGAAATGTCAGTGAGCAAAAGTAGTATGGATCTAGCCTCTTTACCTGCTTGTGCATTGGGTAGCACTGTTACCCATTCAAGTGCTTCCTCTTTTGATGTTCTTACAAGCTCTGGAAATTTGGACTTGGAATCTAAAGTGAATGCTGTTCATCAAGCTAAACTTAGAAATTCTAAAAGCTTTGATAAGCACGCATCAGAAAATCGGTCCGAATGCAGTGAGGAAGAGGGGAGGAAAATCTCAATGGCTTCTGTTTTTGGGAAAGATAGTACATGGTCTTCCTCTAATGGTATGCTTAAAAAGAAAATGCGGAAGAAGTGCAAAAGGATATCTCAAATCAAACCGAGTATGTTATACCACAGTGACATACTGGGATCAACTATTACTGATCAGGTGCAGTCACTGAATGGTGATGTATGTGGCACTCAGACTGTGTTGGAAGAAGTTCAAGATTATGTAGTTGACAGTGTGGGAAAAAAAAGGAACAAGAAGAAGTTATCAGGCAGTGCAAACCAGCGACATATTAACAAAACAAACTACTCTATTACTAAAACAAATAAGTCCAATAGATGCCATATTGAAGATGACGATCTATTAGTGTCAGCAATACTCAAGAATAAGGACTTCAACCCAAAGATAATCCGAGGTAAATCTAGAGCTAAATCCGGCAAATCAAGGGGTTTGAGAAAGCTTAAAAGCTATAAAGGCCGTTGCAGGTTGCTGCCAAGGAATCCTTGTAATGGAGGGAAGCACAATATGGATGGGAAGAAGTATTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGAGAATGAGGTCATATGTTTAAATGATATCATTCAATACCGAAACCCTAAAGATAATTCTGTCACTAAGGATGGCAAGATCACCAAAGACGGTATTGTTTGTAAGTGTTGCGGTAAGGTGCTTACATTATCAGAGTTCAAGATTCATGCTGGGTTTACACTGAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGGTGAGCCCTTTACACTTTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGTCAAAATCAAGCTGGGAACATTGTTGATAATGACAGAAATGATGATTCGTGCGGGATGTGTGGTGAGGGAGGTGAGCTGATATGTTGTGATAACTGCCCCTCTACTTTTCACCTGGCTTGTTTGTCCGCTCAGGAGATCCCCGACGGCAACTGGTACTGCATAAACTGCACTTGTCGGATTTGTGGAAATTTGGTCATTGATAAAGAGGTTTCAGATGCACATGATTCATCGCAATGTTCACAATGCGAACATAAATATCACAAGAAATGCCTCGGAGAAAGAGATAAACTAGAAGGAGCTGTTTCAGACACTTGGTTTTGTAGTCAAAGTTGTCGGGAGGTATACTGTACTCTCCAATCTCAGGTTGGGCTAGTTAATCAAATTGCTGATGGCTTCGCCTGGACGCTTCTTAGATGCATACATGATGACCAAAAGGTTCATTCTGCTCAGTGGTTTGCCCTAAAGGCAGTATGCAATACAAAATTAGCTGTTGCCCTTACCATCATGGAGGAGTGTTTCGTGTCAATGCTAGATCTAAGAACAGGCATCCACATGATACCCCAAGTTTTATTCAATTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACAGTGGTGTTGGAAAAACAGGATGTGTTAATATCTGTAGCATCTATCAGAGTGCACGGGACTACCGTTGCAGAGATGCCTCTGATTGCAACTTGCAGTCGGTATCGTCGCCAAGGAATGTGCCGACGCCTCGTGAGCTCAATCGAAGAGATGTTAATATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCGGATTTGGTGGAGACTTGGACCAAGGGCTTTGGATTCATACCTGTAGGCGACATTGAAAAACGAAGGTTAAAGAAAAACAACTTAATGGTTTTTCCTGGAACAGTGTTACTTGAAAAATCCTTGTATGGCAAGAAGAAAGATGAAGAATTGTGTGATCAATCAACTTTAGCAACAGATGAATCATTCAAAGTAGGTACCTGCTCTGAAGGAATGGACATAGCTGAATCATTGCCGCTAGATGTTGGGAACGCAGCTACCAACGAAGTTGGTGCTAAGTCAGAGTGTGAGCCTGTGGACTGCAAAAATCAACCAGACAATAGGGCCGACAGTGAAATCAGCAGAGATGATAATATTCTAGCCGTTGAAATTGCATTAGGAGATGAAGAATCAACAGAGACAAGTAGGTCTTTCGGTGAAGAGAAAATCACCCCTTTTGAAGGAAACAATGTGGAGGAACCAAGAACAAGTGCCAACAAAGATGGCACTGAATCTGGTGGAAGAGTTTTTGAGGACAAGCATATCAATATAGGTGAAGTAAAGGAAAATGATTTGCATGAACATGTTTCAAATGTGTCGTGCAAGACATTTTCAGGCAACAATTTTGACACAGTATCTAATTTTGAATGCTCAGCGATGTATGATGAAACCGTTATTTTTGGTTCACTAGCAAACTCTGCAAATTAG
Protein sequence

>Msa0294590

MEHLCDDNFEGSNEERQIFTEVFFGDDTFQSSQRRVISGAINLEHESTKNTLKSFGSSNENSVIWRPSSSRFTHPEEDINAIQHSNETALGCLPESLTCEDQNDEIVNVKRMKFSLHELPCSRSNSDVLGSSGIPKVVISNLTCATTDCDSDSIAFRTVESSKHGVISSCYLLKHNLVQKIHASNDDADVTDCKSKTENGNIPKEVSVSKAVASPVSQESSANRLVVTSPSITVVKKSESPLRTEEMPEGFQSSNMVISNSLSQLDQEDPRPLLQFHIVQLLTMSGWSIGKHQRPSRRWMESFYKTPKGKIMREFTKVWRLCGQLLSVEKCNVTYGGRKEWTNISDFWSDLSSALKNVEKLKNQPETAAMLAYQWWIMDPFVVVIHFDRKVGALKRGEEVIKASCSLVSSKGKMAYSSKKKGKMAYAPVDSALENTSHTLSEQKHDQAIFCDSSTATRTTEISAFMINSHACKQTSDSNQEDMYVEEHKPNIIENRLMEMSVSKSSMDLASLPACALGSTVTHSSASSFDVLTSSGNLDLESKVNAVHQAKLRNSKSFDKHASENRSECSEEEGRKISMASVFGKDSTWSSSNGMLKKKMRKKCKRISQIKPSMLYHSDILGSTITDQVQSLNGDVCGTQTVLEEVQDYVVDSVGKKRNKKKLSGSANQRHINKTNYSITKTNKSNRCHIEDDDLLVSAILKNKDFNPKIIRGKSRAKSGKSRGLRKLKSYKGRCRLLPRNPCNGGKHNMDGKKYYLGERTLLSWLIENEVICLNDIIQYRNPKDNSVTKDGKITKDGIVCKCCGKVLTLSEFKIHAGFTLSRPCLNLFMKSGEPFTLCLLQAWSAEYKARKSQNQAGNIVDNDRNDDSCGMCGEGGELICCDNCPSTFHLACLSAQEIPDGNWYCINCTCRICGNLVIDKEVSDAHDSSQCSQCEHKYHKKCLGERDKLEGAVSDTWFCSQSCREVYCTLQSQVGLVNQIADGFAWTLLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFVSMLDLRTGIHMIPQVLFNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRRLVSSIEEMLISVKVEKLVVSAIPDLVETWTKGFGFIPVGDIEKRRLKKNNLMVFPGTVLLEKSLYGKKKDEELCDQSTLATDESFKVGTCSEGMDIAESLPLDVGNAATNEVGAKSECEPVDCKNQPDNRADSEISRDDNILAVEIALGDEESTETSRSFGEEKITPFEGNNVEEPRTSANKDGTESGGRVFEDKHINIGEVKENDLHEHVSNVSCKTFSGNNFDTVSNFECSAMYDETVIFGSLANSAN*