AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0255550


Find 311 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr2_2 gene 49650211 49659886 49650211 ID=Msa0255550;Name=Msa0255550
chr2_2 mRNA 49650211 49659886 49650211 ID=Msa0255550-mRNA-1;Parent=Msa0255550;Name=Msa0255550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=889|0.5|0.45|1|0.7|0.63|11|0|1263
chr2_2 exon 49650211 49650725 49650211 ID=Msa0255550-mRNA-1:exon:14958;Parent=Msa0255550-mRNA-1
chr2_2 exon 49651109 49651198 49651109 ID=Msa0255550-mRNA-1:exon:14957;Parent=Msa0255550-mRNA-1
chr2_2 exon 49651616 49651737 49651616 ID=Msa0255550-mRNA-1:exon:14956;Parent=Msa0255550-mRNA-1
chr2_2 exon 49651999 49652085 49651999 ID=Msa0255550-mRNA-1:exon:14955;Parent=Msa0255550-mRNA-1
chr2_2 exon 49652244 49652485 49652244 ID=Msa0255550-mRNA-1:exon:14954;Parent=Msa0255550-mRNA-1
chr2_2 exon 49654189 49654271 49654189 ID=Msa0255550-mRNA-1:exon:14953;Parent=Msa0255550-mRNA-1
chr2_2 exon 49654723 49654846 49654723 ID=Msa0255550-mRNA-1:exon:14952;Parent=Msa0255550-mRNA-1
chr2_2 exon 49655547 49657145 49655547 ID=Msa0255550-mRNA-1:exon:14951;Parent=Msa0255550-mRNA-1
chr2_2 exon 49657387 49658247 49657387 ID=Msa0255550-mRNA-1:exon:14950;Parent=Msa0255550-mRNA-1
chr2_2 exon 49658431 49658495 49658431 ID=Msa0255550-mRNA-1:exon:14949;Parent=Msa0255550-mRNA-1
chr2_2 exon 49658994 49659886 49658994 ID=Msa0255550-mRNA-1:exon:14948;Parent=Msa0255550-mRNA-1
chr2_2 five_prime_UTR 49658998 49659886 49658998 ID=Msa0255550-mRNA-1:five_prime_utr;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49658994 49658997 49658994 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49658431 49658495 49658431 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49657387 49658247 49657387 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49655547 49657145 49655547 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49654723 49654846 49654723 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49654189 49654271 49654189 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49652244 49652485 49652244 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49651999 49652085 49651999 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49651616 49651737 49651616 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49651109 49651198 49651109 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
chr2_2 CDS 49650211 49650725 49650211 ID=Msa0255550-mRNA-1:cds;Parent=Msa0255550-mRNA-1
Gene Sequence

>Msa0255550

ATGGAAATGAAGTTCGTCAACCAGGGCATTTTGGCTGAAGAAACATGTTACTTCATGAATTTGTTTACATCTAGTCAGAGGCGTGTAATTTCTGGAGCCATCAACCTTGAACATGAATCCACGAAAAACACATTGAAGTCATTTGGCTCTAGTAATGAAAACTCGGTCATATGGCGTCCCTCGTCTTCAAGATTTACCCATCCCGAGGAGGACATTAATGCAATTCAGCATTCCAATGAGACTGCTCTGGGGTGTTTGCCAGAGAGTTTAACTTGTGAAAATCAGAATGATGAAATTGTAAATGTCAAACGTATGAAATTTTCTCTGCACGAACTTCCTTGTAGTAGATCTAATTCAGATGTTTTGGGTTCATCTGGAATTCCAAAAGTAGTAATTTCCAACCTGACTTGTGCTACTACAGACTGTGATAGTGACTCGATTGCATTTCGTACAGTTGAATCATCTAAACACGGTGTGATATCTAGTTGCTATCTATTGAAGCATAACTTGGTACAGAAAATTCATGCTTCTAATGATGATGCAGATGTTACAGATTGTAAATCTAAAACAGAAAATGGGAACATCCCGAAAGAGGTGTCTGTAAGTAAGGCAGTTGCTTCTCCTGTATCCCAGGAGAGCTCGGCAAACAGGCTAGTAGTGACGAGTCCATCAATCACTGTTGTGAAGAAGTCCGAGTCTCCCTTAAGAACTGAGGAAATGCCTGAAGGGTTTCAATCTTCTAATATGGTTATCTCAAATTCATTGTCCCAGCTGGACCAAGAGGATCCCCGTCCCTTACTGCAGTTTCATATCGTGCAGTTGCTTACGATGTCAGGATGGTCTATTGGGAAGCATCAACGGCCTTCTAGGCGGTGGATGGAGTCATTCTACAAGACACCAAAGGGAAAAATTATGCGGGAATTTACAAAACCAGAGACCGCTGCTATGTTGGCTTATCAATGGTGGATTATGGATCCTTTTGTAGTAGTTATACATTTTGATAGAAAGGTCGGTGCTCTGAAAAGGGGAGAAGAGGTTATAAAAGCAAGTTGTAGTTTAGTTTCTAGTAAGGGTAAAATGGCATATTCTTCAAAAAAAAAGGGTAAAATGGCATATGCTCCAGTTGATTCAGCCTTGGAGAATACGTCTCACACTCTTTCTGAACAAAAGCACGACCAAGCCATTTTCTGCGACTCTTCAACAGCCACCAGAACCACAGAAATATCTGCTTTTATGATAAACAGTCATGCTTGTAAACAGACATCTGACAGTAACCAAGAAGATATGTATGTCGAAGAACATAAACCAAACATCATAGAAAACCGATTAATGGAAATGTCAGTGAGCAAAAGTAGTATGGATCTAGCCTCTTTACCTGCTTGTGCATTGGGTAGCACTGTTACCCATTCAAGTGCTTCCCCTTTTGATGTTCTTACAAGCTCTGGAAATTTGGACTTGGAATCTAAAGTGAATGCTGTTCATCAAGCTAAACTTAGAAATTCTAAAAGCTTTGATAAGCACGCATCAGAAAATCGGTCCGAATGCAGTGAGGAAGAGGGGAGGAAAATCTCAATGGCTTCTGTTTTTGGGAAAGATAGTACATGGTCTTCCTCTAATGGTATGCTTAAAAAGAAAATGCGGAAGAAGTGCAAAAGGATATCTCAAATCAAACCGAGTATGTTATACCACAGTGACATACTGGGATCAACTATTACTGATCAGGTGCAGTCACTGAATGGTGATGTATGTGGCACTCAGACTGTGTTGGAAGAAGTTCAAGATTATGTAGTTGACAGTGTGGGAAAAAAAAGGAACAAGAAGAAGTTATCAGGCAGTGCAAACCAGCGACATATTAACAAAACAAACTACTCTATTACTAAAACAAATAAGTCCAATAGATGCCATATTGAAGATGACGATCTATTAGTGTCAGCAATACTCAAGAATAAGGACTTCAACCCAAAGATAATCCGAGGTAAATCTAGAGCTAAATCCGGCAAATCAAGGGGTTTGAGAAAGCTTAAAAGCTATAAAGGCCGTTGCAGGTTGCTGCCAAGGAATCCTTGTAATGGAGGGAAGCACAATATGGATGGGAAGAAGTATTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGAGAATGAGGTCATATGTTTAAATGATATCATTCAATACCGAAACCCTAAAGATAATTCTGTCACTAAGGATGGCAAGATCACCAAAGACGGTATTGTTTGTAAGTGTTGCGGTAAGGTGCTTACATTATCAGAGTTCAAGATTCATGCTGGGTTTACACTTAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGGTGAGCCCTTTACACTTTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGTCAAAATCAAGCTGGGAACATTGTTGATAATGACAGAAATGATGATTCGTGCGGGATGTGTGGTGAGGGAGGTGAGCTGATATGTTGTGATAACTGCCCCTCTACTTTTCACCTGGCTTGTTTGTCCGCTCAGGAGATCCCCGACGGCAACTGGTACTGCATAAACTGCACTTGTCGGATTTGTGGAAATTTGGTCATTGATAAAGAGGTTTCAGATGCACATGATTCATCGCAATGTTCACAATGCGAACATAAATATCACAAGAAATGCCTCGGAGAAAGAGATAAACTAGAAGGAGCTGTTTCAGACACTTGGTTTTGTAGTCAAAGTTGTCGGGAGGTATACTGTACTCTCCAATCTCAGGTTGGGCTAGTTAATCAAATTGCTGATGGCTTCGCCTGGACGCTTCTTAGATGCATACATGATGACCAAAAGGTTCATTCTGCTCAGTGGTTTGCCCTAAAGGCAGTATGCAATACAAAATTAGCTGTTGCCCTTACCATCATGGAGGAGTGTTTCGTGTCAATGCTAGATCTAAGAACAGGCATCCACATGATACCCCAAGTTTTATTCAATTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACAGTGGTGTTGGAAAAACAGGATGTGTTAATATCTGTAGCATCTATCAGAGTGCACGGGACTACCGTTGCAGAGATGCCTCTGATTGCAACTTGCAGTCGGTATCGTCGCCAAGGAATGTGCCGACGCCTCGTGAGCTCAATCGAAGAGGTAAATCTGACTGTAATTTCATATGTTAATATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCGGATTTGGTGGAGACTTGGACCAAGGGCTTTGGATTCATACCTCAACAGATGAATCATTCAAAGTAGGTACCTGCTCTGAAGGAATGGACATAGCTGGATCATTGCCGCTAGATGTTGGGAACGCAGCTACCAACGAAGTTGGTGCTAAGTCAGAGTGTGAGCCTGTGGACTGCAAAAATCAACCAGACAATAGGGCCGACAGTGAAATCAGCAGAGATGATAATATTCTAGCCGTTGAAATTGCATTAGGAGATGAAGAATCAACAGAGACAAGTAGGTCTTTCGGTGAAGAGAAAATCACCCCTTTTGAAGGAAACAATGTGGAGGAACCAAGAACAAGTGCCAACAAAGATGGCACTGAATCTGGTGGAAGAGTTTTTGAGGACAAGCATATCAATATAGGTGAAGTAAAGGAAAATGATTTGCATGAACATGTTTCAAATGTGTCGTGCAAGACATTTTCAGGCAACAATTTTGACACAGTATCTAATTTTGAATGCTCAGCGATGTATGATGAAACCGTTATTTTTGGTTCACTAGCAAACTCTGCAAATTAG

Protein sequence

>Msa0255550

MEMKFVNQGILAEETCYFMNLFTSSQRRVISGAINLEHESTKNTLKSFGSSNENSVIWRPSSSRFTHPEEDINAIQHSNETALGCLPESLTCENQNDEIVNVKRMKFSLHELPCSRSNSDVLGSSGIPKVVISNLTCATTDCDSDSIAFRTVESSKHGVISSCYLLKHNLVQKIHASNDDADVTDCKSKTENGNIPKEVSVSKAVASPVSQESSANRLVVTSPSITVVKKSESPLRTEEMPEGFQSSNMVISNSLSQLDQEDPRPLLQFHIVQLLTMSGWSIGKHQRPSRRWMESFYKTPKGKIMREFTKPETAAMLAYQWWIMDPFVVVIHFDRKVGALKRGEEVIKASCSLVSSKGKMAYSSKKKGKMAYAPVDSALENTSHTLSEQKHDQAIFCDSSTATRTTEISAFMINSHACKQTSDSNQEDMYVEEHKPNIIENRLMEMSVSKSSMDLASLPACALGSTVTHSSASPFDVLTSSGNLDLESKVNAVHQAKLRNSKSFDKHASENRSECSEEEGRKISMASVFGKDSTWSSSNGMLKKKMRKKCKRISQIKPSMLYHSDILGSTITDQVQSLNGDVCGTQTVLEEVQDYVVDSVGKKRNKKKLSGSANQRHINKTNYSITKTNKSNRCHIEDDDLLVSAILKNKDFNPKIIRGKSRAKSGKSRGLRKLKSYKGRCRLLPRNPCNGGKHNMDGKKYYLGERTLLSWLIENEVICLNDIIQYRNPKDNSVTKDGKITKDGIVCKCCGKVLTLSEFKIHAGFTLSRPCLNLFMKSGEPFTLCLLQAWSAEYKARKSQNQAGNIVDNDRNDDSCGMCGEGGELICCDNCPSTFHLACLSAQEIPDGNWYCINCTCRICGNLVIDKEVSDAHDSSQCSQCEHKYHKKCLGERDKLEGAVSDTWFCSQSCREVYCTLQSQVGLVNQIADGFAWTLLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFVSMLDLRTGIHMIPQVLFNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRRLVSSIEEVNLTVISYVNICQGRKACGISHSGFGGDLDQGLWIHTSTDESFKVGTCSEGMDIAGSLPLDVGNAATNEVGAKSECEPVDCKNQPDNRADSEISRDDNILAVEIALGDEESTETSRSFGEEKITPFEGNNVEEPRTSANKDGTESGGRVFEDKHINIGEVKENDLHEHVSNVSCKTFSGNNFDTVSNFECSAMYDETVIFGSLANSAN*