Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741280 | XP_024638930.2 | 88.515 | 1010 | 53 | 12 | 1 | 982 | 29 | 1003 | 0.0 | 1712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741280 | sp|Q9SJQ6|ROS1_ARATH | 44.375 | 640 | 292 | 15 | 365 | 973 | 773 | 1379 | 5.54e-153 | 491 |
| Msa0741280 | sp|Q9SJQ6|ROS1_ARATH | 58.182 | 110 | 41 | 2 | 274 | 379 | 522 | 630 | 4.18e-22 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741280 | G7KEG3 | 87.166 | 748 | 44 | 8 | 253 | 982 | 1 | 714 | 0.0 | 1274 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0741280 | Msa0864320 | 0.847730 | 9.609323e-60 | -8.615850e-47 |
| Msa0741280 | Msa1089130 | 0.802445 | 5.592386e-49 | -8.615850e-47 |
| Msa0741280 | Msa1207710 | 0.824384 | 8.310665e-54 | -8.615850e-47 |
| Msa0741280 | Msa1207760 | 0.828849 | 7.151030e-55 | -8.615850e-47 |
| Msa0741280 | Msa1257960 | 0.813686 | 2.257765e-51 | -8.615850e-47 |
| Msa0741280 | Msa1298980 | 0.817378 | 3.402480e-52 | -8.615850e-47 |
| Msa0166580 | Msa0741280 | 0.801214 | 1.000510e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741280 | MtrunA17_Chr5g0446571 | 89.194 | 509 | 29 | 3 | 167 | 674 | 1 | 484 | 0.0 | 857 |
| Msa0741280 | MtrunA17_Chr2g0279191 | 71.669 | 593 | 132 | 5 | 39 | 629 | 2 | 560 | 0.0 | 819 |
| Msa0741280 | MtrunA17_Chr1g0198151 | 47.505 | 541 | 234 | 11 | 464 | 973 | 1251 | 1772 | 4.15e-156 | 504 |
| Msa0741280 | MtrunA17_Chr1g0198151 | 50.000 | 140 | 57 | 4 | 264 | 392 | 745 | 882 | 9.54e-26 | 115 |
| Msa0741280 | MtrunA17_Chr1g0179341 | 46.223 | 556 | 242 | 12 | 463 | 973 | 1606 | 2149 | 3.02e-149 | 489 |
| Msa0741280 | MtrunA17_Chr1g0179341 | 60.748 | 107 | 37 | 2 | 274 | 377 | 1162 | 1266 | 8.43e-20 | 95.9 |
| Msa0741280 | MtrunA17_Chr7g0265771 | 43.523 | 579 | 248 | 10 | 468 | 973 | 1180 | 1752 | 1.86e-145 | 475 |
| Msa0741280 | MtrunA17_Chr7g0265771 | 53.125 | 128 | 50 | 4 | 274 | 393 | 703 | 828 | 1.12e-22 | 105 |
| Msa0741280 | MtrunA17_Chr5g0446581 | 78.531 | 177 | 12 | 5 | 689 | 848 | 1 | 168 | 1.52e-78 | 253 |
| Msa0741280 | MtrunA17_Chr5g0446591 | 91.803 | 61 | 5 | 0 | 878 | 938 | 4 | 64 | 8.20e-34 | 124 |
| Msa0741280 | MtrunA17_Chr2g0279201 | 81.967 | 61 | 11 | 0 | 878 | 938 | 4 | 64 | 9.69e-31 | 115 |
| Msa0741280 | MtrunA17_Chr2g0320931 | 56.881 | 109 | 46 | 1 | 337 | 444 | 2 | 110 | 2.33e-28 | 110 |
| Msa0741280 | MtrunA17_Chr4g0059441 | 31.707 | 123 | 84 | 0 | 491 | 613 | 115 | 237 | 1.06e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741280 | AT2G36490.1 | 44.375 | 640 | 292 | 15 | 365 | 973 | 773 | 1379 | 5.63e-154 | 491 |
| Msa0741280 | AT2G36490.1 | 58.182 | 110 | 41 | 2 | 274 | 379 | 522 | 630 | 4.25e-23 | 107 |
| Msa0741280 | AT5G04560.1 | 46.801 | 547 | 241 | 10 | 463 | 973 | 1186 | 1718 | 3.09e-151 | 490 |
| Msa0741280 | AT5G04560.1 | 49.359 | 156 | 65 | 5 | 251 | 394 | 666 | 819 | 1.11e-27 | 122 |
| Msa0741280 | AT5G04560.3 | 46.801 | 547 | 241 | 10 | 463 | 973 | 1186 | 1718 | 3.09e-151 | 490 |
| Msa0741280 | AT5G04560.3 | 49.359 | 156 | 65 | 5 | 251 | 394 | 666 | 819 | 1.11e-27 | 122 |
| Msa0741280 | AT5G04560.2 | 46.801 | 547 | 241 | 10 | 463 | 973 | 1444 | 1976 | 1.24e-149 | 489 |
| Msa0741280 | AT5G04560.2 | 49.359 | 156 | 65 | 5 | 251 | 394 | 924 | 1077 | 1.27e-27 | 122 |
| Msa0741280 | AT4G34060.5 | 36.876 | 781 | 400 | 19 | 231 | 973 | 107 | 832 | 4.81e-136 | 430 |
| Msa0741280 | AT4G34060.4 | 36.876 | 781 | 400 | 19 | 231 | 973 | 244 | 969 | 3.36e-135 | 431 |
| Msa0741280 | AT4G34060.1 | 36.876 | 781 | 400 | 19 | 231 | 973 | 303 | 1028 | 1.43e-134 | 431 |
| Msa0741280 | AT4G34060.3 | 36.876 | 781 | 400 | 19 | 231 | 973 | 364 | 1089 | 3.58e-134 | 432 |
| Msa0741280 | AT3G10010.1 | 42.909 | 550 | 259 | 8 | 463 | 973 | 785 | 1318 | 2.86e-132 | 432 |
| Msa0741280 | AT3G10010.1 | 54.369 | 103 | 44 | 1 | 278 | 377 | 495 | 597 | 1.25e-13 | 76.3 |
| Msa0741280 | AT3G10010.2 | 42.909 | 550 | 259 | 8 | 463 | 973 | 785 | 1318 | 2.86e-132 | 432 |
| Msa0741280 | AT3G10010.2 | 54.369 | 103 | 44 | 1 | 278 | 377 | 495 | 597 | 1.25e-13 | 76.3 |
| Msa0741280 | AT4G34060.2 | 37.199 | 707 | 351 | 19 | 231 | 899 | 303 | 954 | 3.00e-119 | 388 |
| Msa0741280 | AT3G47830.1 | 31.707 | 123 | 84 | 0 | 491 | 613 | 128 | 250 | 3.55e-12 | 68.9 |
Find 149 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATGTTGGACACAATTT+TGG | 0.108422 | 5_1:+60868235 | Msa0741280:CDS |
| TTCTTTAATTTCTCTGGATA+TGG | 0.171730 | 5_1:-60867733 | None:intergenic |
| CAAAGATTCAAAGGTTTATC+AGG | 0.181892 | 5_1:+60867978 | Msa0741280:CDS |
| ATCGGACAAGCATTGCAATT+TGG | 0.190300 | 5_1:-60870617 | None:intergenic |
| GCTGATCATTAACATCATTT+TGG | 0.207758 | 5_1:-60867663 | None:intergenic |
| TACACTTACTTTGCTTCATT+TGG | 0.238782 | 5_1:-60869821 | None:intergenic |
| CAATTAATGTTCCTAGAAAA+TGG | 0.251519 | 5_1:+60873047 | Msa0741280:CDS |
| CACTAGGGTCTTTAAATAAA+AGG | 0.254650 | 5_1:+60867632 | Msa0741280:intron |
| AAGAAACAGATAGCATATTT+TGG | 0.258696 | 5_1:+60873082 | Msa0741280:CDS |
| TGCTTCGGAGTTGAAGGTTT+TGG | 0.258889 | 5_1:-60867781 | None:intergenic |
| TGCTTCGGAGTTGAAGGTTT+TGG | 0.258889 | 5_1:-60867853 | None:intergenic |
| TCAAAATTCAACAATATCTT+TGG | 0.264764 | 5_1:+60870346 | Msa0741280:CDS |
| TTATGTATTTGAATTGATTC+TGG | 0.265653 | 5_1:-60870203 | None:intergenic |
| CATAATTGCTTATAAAATTC+AGG | 0.270783 | 5_1:+60869643 | Msa0741280:CDS |
| TGGAATTTCTTTAATTTCTC+TGG | 0.287645 | 5_1:-60867739 | None:intergenic |
| TCGGACAAGCATTGCAATTT+GGG | 0.288104 | 5_1:-60870616 | None:intergenic |
| TTGCTCCAACAATCAGAGTA+TGG | 0.298154 | 5_1:-60871141 | None:intergenic |
| CCCCTTATCTTCTGGTTGTA+TGG | 0.300773 | 5_1:+60872453 | Msa0741280:CDS |
| ATCTCTGGCCCTTTGCAAAC+GGG | 0.302398 | 5_1:-60868191 | None:intergenic |
| GCGTGCACTGAAGGGATTTA+TGG | 0.307586 | 5_1:+60869754 | Msa0741280:intron |
| GATTGATCTGTGGTTGGTTT+TGG | 0.308599 | 5_1:-60871075 | None:intergenic |
| TAGAAGAGAAAGAATAAGTT+TGG | 0.312327 | 5_1:+60868155 | Msa0741280:CDS |
| AAGAAAACTCTACCATAAAA+TGG | 0.317142 | 5_1:+60868515 | Msa0741280:CDS |
| GTTTCCCATACTCTGATTGT+TGG | 0.320980 | 5_1:+60871136 | Msa0741280:CDS |
| CATTATCAGTTGATAACCTT+TGG | 0.322958 | 5_1:+60870492 | Msa0741280:CDS |
| GGATATGGAGACACCACTTT+AGG | 0.331042 | 5_1:-60867718 | None:intergenic |
| AAATGACTGTTTGTAGCATT+TGG | 0.331522 | 5_1:-60871429 | None:intergenic |
| ATGCATTGGCATGATCCATT+TGG | 0.338385 | 5_1:-60871110 | None:intergenic |
| TCTCCATCATCGACGAATAA+TGG | 0.350818 | 5_1:-60867925 | None:intergenic |
| AACAGTTCTTGGAACACTTC+TGG | 0.355090 | 5_1:+60872751 | Msa0741280:CDS |
| TATACTTGAAAAGAAAATAT+TGG | 0.355229 | 5_1:+60869469 | Msa0741280:CDS |
| GATGCGGGCATCTCAATTAT+AGG | 0.369192 | 5_1:-60871207 | None:intergenic |
| ATGTTCCTAGAAAATGGATA+TGG | 0.370059 | 5_1:+60873053 | Msa0741280:CDS |
| GATCTCTGGCCCTTTGCAAA+CGG | 0.370152 | 5_1:-60868192 | None:intergenic |
| TAAATCACTTATAACTCATT+TGG | 0.376332 | 5_1:-60874498 | None:intergenic |
| CAATGATGTGCTTTCATGTT+CGG | 0.379965 | 5_1:-60871232 | None:intergenic |
| AGAATCTGAGTTCCTCTCTA+TGG | 0.380275 | 5_1:-60869387 | None:intergenic |
| TTCCTCTGCTTCGGAGTTGA+AGG | 0.382168 | 5_1:-60867787 | None:intergenic |
| TTCCTCTGCTTCGGAGTTGA+AGG | 0.382168 | 5_1:-60867859 | None:intergenic |
| TGATCCATCCCCTTATCTTC+TGG | 0.382226 | 5_1:+60872445 | Msa0741280:CDS |
| AATTTCTTTGTCATCAACTT+TGG | 0.390007 | 5_1:-60869348 | None:intergenic |
| TTTGGAGTGTCGTTGCTTCC+GGG | 0.390139 | 5_1:-60867763 | None:intergenic |
| ACTTACTTTGCTTCATTTGG+TGG | 0.393936 | 5_1:-60869818 | None:intergenic |
| ACCATGGAAAGGCTCAGTTT+TGG | 0.397302 | 5_1:+60869046 | Msa0741280:CDS |
| AGTCAGACTGAAACAGTTCT+TGG | 0.399032 | 5_1:+60872740 | Msa0741280:CDS |
| ACGAAGAGACATTACGAGTA+TGG | 0.400107 | 5_1:+60868424 | Msa0741280:CDS |
| CTTCTGGTTGTATGGCTACC+AGG | 0.409521 | 5_1:+60872461 | Msa0741280:CDS |
| TTTAACTTTACCTTGACAAA+TGG | 0.410634 | 5_1:-60869109 | None:intergenic |
| CAGAAAATGACTTCATTGTC+AGG | 0.411077 | 5_1:+60868066 | Msa0741280:CDS |
| GGAAAAGAAAATGCAACATT+GGG | 0.412481 | 5_1:+60869490 | Msa0741280:CDS |
| GATCAAGTGCATACTGTTCA+AGG | 0.418609 | 5_1:+60868552 | Msa0741280:CDS |
| TGCATTGGCATGATCCATTT+GGG | 0.421828 | 5_1:-60871109 | None:intergenic |
| CTAGTTGAGAGTAGGAGAAT+TGG | 0.424923 | 5_1:+60868096 | Msa0741280:CDS |
| ATCATGCGAACTCTGTTGAT+TGG | 0.437720 | 5_1:+60869555 | Msa0741280:CDS |
| TGACTACTGAAGTTAAATGT+TGG | 0.443967 | 5_1:-60871318 | None:intergenic |
| GATTCTGGTAATGGTTGTAA+AGG | 0.445716 | 5_1:-60870188 | None:intergenic |
| ATTTGAATTGATTCTGGTAA+TGG | 0.446941 | 5_1:-60870197 | None:intergenic |
| ATTCTGGTAATGGTTGTAAA+GGG | 0.447281 | 5_1:-60870187 | None:intergenic |
| TGAACATAAGAGGAGGTATT+GGG | 0.450907 | 5_1:+60868485 | Msa0741280:CDS |
| ATGAACATAAGAGGAGGTAT+TGG | 0.451692 | 5_1:+60868484 | Msa0741280:CDS |
| GCCATACAACCAGAAGATAA+GGG | 0.455893 | 5_1:-60872454 | None:intergenic |
| TCATCATGCCTGCCGATGTA+TGG | 0.460052 | 5_1:+60871345 | Msa0741280:CDS |
| ATGTTCCATTCAAAGGAAAA+CGG | 0.464971 | 5_1:-60872886 | None:intergenic |
| AAAATAGATGATATAGGTCT+TGG | 0.465467 | 5_1:-60874434 | None:intergenic |
| ATCAATTGTAGCAACCCAAA+TGG | 0.468364 | 5_1:+60871095 | Msa0741280:CDS |
| TGGAAAAGAAAATGCAACAT+TGG | 0.470264 | 5_1:+60869489 | Msa0741280:CDS |
| ATTCTAAATTCATGCTTCCA+TGG | 0.470972 | 5_1:-60869781 | None:intergenic |
| TCATCGCTAACTAATTTGAC+AGG | 0.475212 | 5_1:-60869227 | None:intergenic |
| GGAACTCAGATTCTCGTAGT+AGG | 0.476062 | 5_1:+60869396 | Msa0741280:CDS |
| ATCTGCCATCGTATACAATT+CGG | 0.478217 | 5_1:+60868032 | Msa0741280:CDS |
| TGAAAGTATGTTCCATTCAA+AGG | 0.479284 | 5_1:-60872893 | None:intergenic |
| TGTTCCATTCAAAGGAAAAC+GGG | 0.480045 | 5_1:-60872885 | None:intergenic |
| ATGGAAGCATGAATTTAGAA+TGG | 0.481227 | 5_1:+60869783 | Msa0741280:CDS |
| CACTCTCATAAGTATAATCA+TGG | 0.482577 | 5_1:-60871275 | None:intergenic |
| AACGGGCTCTCATTGCAGTT+CGG | 0.484773 | 5_1:-60872868 | None:intergenic |
| GCAACACAACGGACAGACTT+AGG | 0.485288 | 5_1:+60874462 | Msa0741280:CDS |
| TACCAATGTAGGTTTGTCAA+TGG | 0.485334 | 5_1:+60874260 | Msa0741280:intron |
| CTTTCATGTTCGGGTGATGC+GGG | 0.485777 | 5_1:-60871222 | None:intergenic |
| AGCCATACAACCAGAAGATA+AGG | 0.488814 | 5_1:-60872455 | None:intergenic |
| GGAATATTTCAAAGATTCAA+AGG | 0.489974 | 5_1:+60867969 | Msa0741280:CDS |
| TGATCAAGTTTGCATAGTCT+TGG | 0.495087 | 5_1:-60870369 | None:intergenic |
| ATATTTGTAGCGTGCACTGA+AGG | 0.495187 | 5_1:+60869745 | Msa0741280:intron |
| AATGATGTGCTTTCATGTTC+GGG | 0.496888 | 5_1:-60871231 | None:intergenic |
| AAGCCATTATTCGTCGATGA+TGG | 0.498412 | 5_1:+60867922 | Msa0741280:CDS |
| GGACGAATTGTTGTACGATT+GGG | 0.499702 | 5_1:+60870158 | Msa0741280:CDS |
| AAGAGAATGATGAACATAAG+AGG | 0.503284 | 5_1:+60868475 | Msa0741280:CDS |
| TATTTACACTCGTCCTTCAT+CGG | 0.505196 | 5_1:-60870635 | None:intergenic |
| TTCGCCCGAGCTTTCTAGAT+CGG | 0.507119 | 5_1:-60872684 | None:intergenic |
| CGAGCTGATGTTTCGTCTCA+AGG | 0.507196 | 5_1:+60865304 | Msa0741280:CDS |
| TCTCTGGCCCTTTGCAAACG+GGG | 0.511909 | 5_1:-60868190 | None:intergenic |
| GAGTGTCGTTGCTTCCGGGA+TGG | 0.513703 | 5_1:-60867759 | None:intergenic |
| TCATGCGAACTCTGTTGATT+GGG | 0.517031 | 5_1:+60869556 | Msa0741280:CDS |
| TTGCAATGCTTGTCCGATGA+AGG | 0.517404 | 5_1:+60870622 | Msa0741280:CDS |
| GCTCTCATTGCAGTTCGGAC+TGG | 0.517673 | 5_1:-60872863 | None:intergenic |
| AACATACTTTCAAGTTAATG+AGG | 0.517883 | 5_1:+60872904 | Msa0741280:CDS |
| AGTGTTGTTGTCATGAGTGT+TGG | 0.520884 | 5_1:-60867830 | None:intergenic |
| ACAATTGATTGATCTGTGGT+TGG | 0.524864 | 5_1:-60871081 | None:intergenic |
| GTTAATATGTACCTTTCCAA+AGG | 0.526832 | 5_1:-60870508 | None:intergenic |
| AAAGATTCAAAGGTTTATCA+GGG | 0.528203 | 5_1:+60867979 | Msa0741280:CDS |
| TGCTCCAACAATCAGAGTAT+GGG | 0.528817 | 5_1:-60871140 | None:intergenic |
| GAAGAAATATCAACCTAAAG+TGG | 0.530064 | 5_1:+60867705 | Msa0741280:CDS |
| TGGACGAATTGTTGTACGAT+TGG | 0.537128 | 5_1:+60870157 | Msa0741280:CDS |
| TAAAGCCGATCTAGAAAGCT+CGG | 0.538043 | 5_1:+60872679 | Msa0741280:intron |
| GTTTATGTCTAGTTGAGAGT+AGG | 0.548399 | 5_1:+60868088 | Msa0741280:CDS |
| TGGACTGGGTTTGAAAAGTG+TGG | 0.550538 | 5_1:+60869973 | Msa0741280:CDS |
| TGAGAGTGACGAAGATATTG+AGG | 0.552359 | 5_1:+60871290 | Msa0741280:CDS |
| TCAGTTGATAACCTTTGGAA+AGG | 0.560599 | 5_1:+60870497 | Msa0741280:CDS |
| AATTGTTGTACGATTGGGAT+GGG | 0.560991 | 5_1:+60870163 | Msa0741280:CDS |
| TATTTGTAGCGTGCACTGAA+GGG | 0.561768 | 5_1:+60869746 | Msa0741280:intron |
| TGCTACAATTGATTGATCTG+TGG | 0.563076 | 5_1:-60871085 | None:intergenic |
| CTCTGGCCCTTTGCAAACGG+GGG | 0.566090 | 5_1:-60868189 | None:intergenic |
| ATTATGCAAGTTCTCTTGCA+AGG | 0.566239 | 5_1:+60870657 | Msa0741280:CDS |
| CGATGCAAAATAGATGATAT+AGG | 0.570163 | 5_1:-60874440 | None:intergenic |
| GTTGTTGTCATGAGTGTTGG+CGG | 0.571107 | 5_1:-60867827 | None:intergenic |
| TCCAAAACTGAGCCTTTCCA+TGG | 0.572193 | 5_1:-60869047 | None:intergenic |
| AACCTTCAACTCCGAAGCAG+AGG | 0.576298 | 5_1:+60867785 | Msa0741280:CDS |
| AACCTTCAACTCCGAAGCAG+AGG | 0.576298 | 5_1:+60867857 | Msa0741280:CDS |
| GATTCAAAGGTTTATCAGGG+TGG | 0.578189 | 5_1:+60867982 | Msa0741280:CDS |
| TGAAAGGTGGATGTAAATGT+TGG | 0.583214 | 5_1:+60870137 | Msa0741280:intron |
| GTATGGGAAACAATATGCAT+TGG | 0.583379 | 5_1:-60871124 | None:intergenic |
| TCTGTTCAGTTATGTCCTCA+CGG | 0.583444 | 5_1:+60872292 | Msa0741280:intron |
| GCTTTCATGTTCGGGTGATG+CGG | 0.584502 | 5_1:-60871223 | None:intergenic |
| TTGTTACGAAGAGAAAATGT+TGG | 0.591213 | 5_1:+60868223 | Msa0741280:CDS |
| AAAGCCGATCTAGAAAGCTC+GGG | 0.593461 | 5_1:+60872680 | Msa0741280:intron |
| AGACGATTCTTACCATGGAA+AGG | 0.600387 | 5_1:+60869035 | Msa0741280:CDS |
| GAATTGTTGTACGATTGGGA+TGG | 0.601169 | 5_1:+60870162 | Msa0741280:CDS |
| AAAGAAGAGTAAGAAACAGG+AGG | 0.611848 | 5_1:+60869439 | Msa0741280:CDS |
| ACTCAGATTCTCGTAGTAGG+AGG | 0.613815 | 5_1:+60869399 | Msa0741280:CDS |
| CATTTATGTCACTTGCTGCG+AGG | 0.615123 | 5_1:+60869201 | Msa0741280:CDS |
| ACACCTACCTCAGCTAGAAG+AGG | 0.616104 | 5_1:-60872323 | None:intergenic |
| GTGATAGACGATTCTTACCA+TGG | 0.616260 | 5_1:+60869030 | Msa0741280:CDS |
| GATGGATCATCATGTTCTCG+TGG | 0.618593 | 5_1:-60872431 | None:intergenic |
| CCATACAACCAGAAGATAAG+GGG | 0.618701 | 5_1:-60872453 | None:intergenic |
| ATAGTTCGTGTTCCATAGAG+AGG | 0.620282 | 5_1:+60869375 | Msa0741280:CDS |
| ATGTGTCTGACCATTTGTCA+AGG | 0.628731 | 5_1:+60869099 | Msa0741280:CDS |
| ATTGTGAAGCATTAACGCCA+TGG | 0.630733 | 5_1:-60871389 | None:intergenic |
| CACCTACCTCAGCTAGAAGA+GGG | 0.630964 | 5_1:-60872322 | None:intergenic |
| ACAACCAGAAGATAAGGGGA+TGG | 0.637113 | 5_1:-60872449 | None:intergenic |
| TAATCACCCTCTTCTAGCTG+AGG | 0.639180 | 5_1:+60872316 | Msa0741280:CDS |
| AGAATGATGAACATAAGAGG+AGG | 0.639662 | 5_1:+60868478 | Msa0741280:CDS |
| CATCGCTAACTAATTTGACA+GGG | 0.643527 | 5_1:-60869226 | None:intergenic |
| AAGGGATTTATGGATAACCA+TGG | 0.651198 | 5_1:+60869764 | Msa0741280:CDS |
| AAATTAAAGAAATTCCATCC+CGG | 0.652333 | 5_1:+60867745 | Msa0741280:CDS |
| TTGTACCGAATTGTATACGA+TGG | 0.665470 | 5_1:-60868037 | None:intergenic |
| AAGCAAGACTGACTTGCATG+AGG | 0.668168 | 5_1:+60872709 | Msa0741280:CDS |
| GCTGAAGCTATTGAAAAGCG+TGG | 0.671675 | 5_1:+60869611 | Msa0741280:CDS |
| GGATCATCATGTTCTCGTGG+AGG | 0.683144 | 5_1:-60872428 | None:intergenic |
| GAAGAGGGTGATTATCCGTG+AGG | 0.707601 | 5_1:-60872307 | None:intergenic |
| GGGACATCATCAATGACGAG+AGG | 0.721595 | 5_1:+60873109 | Msa0741280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTAGAAAATACTT+TGG | + | chr5_1:60868733-60868752 | Msa0741280:intron | 10.0% |
| !! | AAAAAAAAAAAAAACTTTAC+GGG | - | chr5_1:60870246-60870265 | None:intergenic | 10.0% |
| !! | TTGCATTTATTTATTAAATT+TGG | + | chr5_1:60870686-60870705 | Msa0741280:intron | 10.0% |
| !!! | CTTTTATTTGTAAAAAAAAT+TGG | - | chr5_1:60872810-60872829 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTACAAATAAA+AGG | + | chr5_1:60872808-60872827 | Msa0741280:intron | 10.0% |
| !!! | AATACTTTTGATTTTATCAT+TGG | - | chr5_1:60866048-60866067 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTATTGCTTTTT+AGG | - | chr5_1:60866430-60866449 | None:intergenic | 15.0% |
| !!! | AAGCAATACTATTTTTTTAT+TGG | + | chr5_1:60866433-60866452 | Msa0741280:intron | 15.0% |
| !! | AACACTTAATTGTAAATTTA+GGG | - | chr5_1:60866671-60866690 | None:intergenic | 15.0% |
| !! | AAACACTTAATTGTAAATTT+AGG | - | chr5_1:60866672-60866691 | None:intergenic | 15.0% |
| !!! | TTGAGTTTTATTAAGAATTT+TGG | + | chr5_1:60866966-60866985 | Msa0741280:intron | 15.0% |
| !!! | TGAGTTTTATTAAGAATTTT+GGG | + | chr5_1:60866967-60866986 | Msa0741280:intron | 15.0% |
| !!! | ATGAATATTTTATAATTGGT+AGG | + | chr5_1:60867033-60867052 | Msa0741280:intron | 15.0% |
| !! | ATTAAAGATAATTCAACTTA+TGG | - | chr5_1:60868630-60868649 | None:intergenic | 15.0% |
| !!! | GTGTCAAAATATTTTTAAAA+TGG | + | chr5_1:60868937-60868956 | Msa0741280:intron | 15.0% |
| !! | AACAACAATGAATTTATAAT+TGG | - | chr5_1:60868968-60868987 | None:intergenic | 15.0% |
| !! | ATTAGATTAATAAACTTTGT+AGG | + | chr5_1:60869008-60869027 | Msa0741280:intron | 15.0% |
| !!! | TTCATTTTATTATCAGATTT+AGG | - | chr5_1:60869281-60869300 | None:intergenic | 15.0% |
| !! | TATACTTGAAAAGAAAATAT+TGG | + | chr5_1:60869469-60869488 | Msa0741280:CDS | 15.0% |
| !!! | TGATATAATTTGTCTATATT+AGG | + | chr5_1:60869884-60869903 | Msa0741280:intron | 15.0% |
| !!! | GATAATTTTGATTTTCTTAA+TGG | - | chr5_1:60870560-60870579 | None:intergenic | 15.0% |
| !! | ATTACATATTACAATTAACA+AGG | - | chr5_1:60870789-60870808 | None:intergenic | 15.0% |
| !! | TTATCTCCATAAAAATATAA+TGG | - | chr5_1:60870904-60870923 | None:intergenic | 15.0% |
| !! | AAAGAATAACATAAGAATAT+AGG | - | chr5_1:60871516-60871535 | None:intergenic | 15.0% |
| !!! | AATTAGGAAAAGAAATTTTA+AGG | - | chr5_1:60872017-60872036 | None:intergenic | 15.0% |
| !! | TATAAGAATACACAAAAAAT+AGG | - | chr5_1:60872661-60872680 | None:intergenic | 15.0% |
| !! | TTTCATAAAATGTTAAATCT+TGG | - | chr5_1:60872837-60872856 | None:intergenic | 15.0% |
| !!! | ATAAATAAATAACGGATTTA+TGG | + | chr5_1:60873268-60873287 | Msa0741280:intron | 15.0% |
| !! | AAAATAACAAAGTTCATTAA+TGG | - | chr5_1:60873350-60873369 | None:intergenic | 15.0% |
| !! | AGACTAATATTAAAAAGAAA+CGG | + | chr5_1:60874187-60874206 | Msa0741280:intron | 15.0% |
| !!! | AATGTTCATTTATGTTTTAT+AGG | + | chr5_1:60874371-60874390 | Msa0741280:intron | 15.0% |
| !!! | ATGTTCATTTATGTTTTATA+GGG | + | chr5_1:60874372-60874391 | Msa0741280:intron | 15.0% |
| !!! | ATAATTTCCTAAGTTTTGAA+GGG | + | chr5_1:60865609-60865628 | Msa0741280:intron | 20.0% |
| !! | ACTTCCATTAATTTATTGTT+CGG | - | chr5_1:60865911-60865930 | None:intergenic | 20.0% |
| !!! | GTATTTAAACTATTTTTGAG+AGG | - | chr5_1:60865981-60866000 | None:intergenic | 20.0% |
| !! | AGATAATATAAAACGAGTTT+AGG | + | chr5_1:60866086-60866105 | Msa0741280:intron | 20.0% |
| !! | GTAAAATTAATATTCTCAGT+TGG | + | chr5_1:60866624-60866643 | Msa0741280:intron | 20.0% |
| !!! | TTAACTAGTTTTATATGCTT+CGG | - | chr5_1:60866761-60866780 | None:intergenic | 20.0% |
| !!! | AATTTTCACAAAAGTTTTTG+TGG | + | chr5_1:60866815-60866834 | Msa0741280:intron | 20.0% |
| !!! | CCTTTTCATTATTTAGTTTT+TGG | - | chr5_1:60866872-60866891 | None:intergenic | 20.0% |
| !! | CCAAAAACTAAATAATGAAA+AGG | + | chr5_1:60866869-60866888 | Msa0741280:intron | 20.0% |
| !! | TCTTAATAAAACTCAAACTT+AGG | - | chr5_1:60866962-60866981 | None:intergenic | 20.0% |
| !! | AATGTGTATGGAAAAATATA+TGG | + | chr5_1:60867127-60867146 | Msa0741280:intron | 20.0% |
| !! | TATGTTATGTTATCTCAAAT+AGG | - | chr5_1:60867329-60867348 | None:intergenic | 20.0% |
| !!! | CTTTGAAATATTCCAAAAAT+GGG | - | chr5_1:60867963-60867982 | None:intergenic | 20.0% |
| !!! | TCTTTGAAATATTCCAAAAA+TGG | - | chr5_1:60867964-60867983 | None:intergenic | 20.0% |
| !!! | ATTTTCCAATAATGTGTAAA+AGG | + | chr5_1:60868124-60868143 | Msa0741280:CDS | 20.0% |
| !!! | TTATCAAAGATCTCATTTTT+TGG | - | chr5_1:60868284-60868303 | None:intergenic | 20.0% |
| !!! | TCATTTTCTATTATTAGCAT+CGG | + | chr5_1:60868597-60868616 | Msa0741280:intron | 20.0% |
| !! | TTACAGTTGATTAAAAGATA+TGG | - | chr5_1:60868820-60868839 | None:intergenic | 20.0% |
| !!! | CTTAATTTACCCAATTTTTT+TGG | + | chr5_1:60869139-60869158 | Msa0741280:intron | 20.0% |
| !! | TATTCAACACCAAAAAAATT+GGG | - | chr5_1:60869151-60869170 | None:intergenic | 20.0% |
| !! | ATATTCAACACCAAAAAAAT+TGG | - | chr5_1:60869152-60869171 | None:intergenic | 20.0% |
| !!! | AAACAAAAACATGGTTTTAT+CGG | + | chr5_1:60869253-60869272 | Msa0741280:CDS | 20.0% |
| !! | CATAATTGCTTATAAAATTC+AGG | + | chr5_1:60869643-60869662 | Msa0741280:CDS | 20.0% |
| !! | CTTGATTAAAAAAATTCATC+TGG | - | chr5_1:60869913-60869932 | None:intergenic | 20.0% |
| !!! | TTATGTATTTGAATTGATTC+TGG | - | chr5_1:60870206-60870225 | None:intergenic | 20.0% |
| !!! | AGATATTGTTGAATTTTGAT+TGG | - | chr5_1:60870345-60870364 | None:intergenic | 20.0% |
| !! | TCAAAATTCAACAATATCTT+TGG | + | chr5_1:60870346-60870365 | Msa0741280:CDS | 20.0% |
| !!! | GCAATGACTTTATTTATTAA+TGG | + | chr5_1:60870716-60870735 | Msa0741280:intron | 20.0% |
| !!! | ACTTTATTTATTAATGGAAG+AGG | + | chr5_1:60870722-60870741 | Msa0741280:intron | 20.0% |
| !!! | CTTTATTTATTAATGGAAGA+GGG | + | chr5_1:60870723-60870742 | Msa0741280:intron | 20.0% |
| !!! | TTGTGTCCATTATATTTTTA+TGG | + | chr5_1:60870895-60870914 | Msa0741280:intron | 20.0% |
| !! | GTAACAATAATCTTACAATT+AGG | - | chr5_1:60870940-60870959 | None:intergenic | 20.0% |
| !! | TTATACCAAAGTCAATATTA+GGG | - | chr5_1:60870994-60871013 | None:intergenic | 20.0% |
| !! | ATTATACCAAAGTCAATATT+AGG | - | chr5_1:60870995-60871014 | None:intergenic | 20.0% |
| !! | TCAAAAAAATTACCATACAT+CGG | - | chr5_1:60871360-60871379 | None:intergenic | 20.0% |
| !! | AACATGCATAACATTAAATT+AGG | - | chr5_1:60872033-60872052 | None:intergenic | 20.0% |
| !! | TTAATGATTATAAACACAGA+AGG | - | chr5_1:60872491-60872510 | None:intergenic | 20.0% |
| !!! | TTTCTTAGGTGTTTTTTATA+TGG | - | chr5_1:60873310-60873329 | None:intergenic | 20.0% |
| !!! | TGTCAATTGTTTTACAATTC+AGG | - | chr5_1:60865368-60865387 | None:intergenic | 25.0% |
| ! | TTGACAATTTACTATCTCTA+CGG | + | chr5_1:60865382-60865401 | Msa0741280:intron | 25.0% |
| ! | ATCAAGTGATGATAAATCTA+TGG | - | chr5_1:60865557-60865576 | None:intergenic | 25.0% |
| ! | TTAGGAAATTATGTAGAAAG+AGG | - | chr5_1:60865601-60865620 | None:intergenic | 25.0% |
| !!! | CATAATTTCCTAAGTTTTGA+AGG | + | chr5_1:60865608-60865627 | Msa0741280:intron | 25.0% |
| ! | TGAGCTAATCAAATTCATTA+AGG | - | chr5_1:60865741-60865760 | None:intergenic | 25.0% |
| ! | TATTGCAATTACCATATATC+AGG | + | chr5_1:60865795-60865814 | Msa0741280:intron | 25.0% |
| ! | GAATCCGAACAATAAATTAA+TGG | + | chr5_1:60865904-60865923 | Msa0741280:intron | 25.0% |
| ! | AAAATAGTTTAAATACACCC+AGG | + | chr5_1:60865985-60866004 | Msa0741280:intron | 25.0% |
| ! | AAATAGTTTAAATACACCCA+GGG | + | chr5_1:60865986-60866005 | Msa0741280:intron | 25.0% |
| ! | AACTCTTCGTATTGTATATT+TGG | + | chr5_1:60866188-60866207 | Msa0741280:intron | 25.0% |
| ! | AGACATGTAAGATTATTAAG+AGG | + | chr5_1:60866218-60866237 | Msa0741280:intron | 25.0% |
| ! | AGATTATTAAGAGGTCAATT+TGG | + | chr5_1:60866227-60866246 | Msa0741280:intron | 25.0% |
| ! | ATTATCTTGAGTAGATAATG+TGG | + | chr5_1:60866255-60866274 | Msa0741280:intron | 25.0% |
| ! | AAAAACTATGAACTTCCTAA+TGG | + | chr5_1:60866301-60866320 | Msa0741280:intron | 25.0% |
| !! | ATTATGATAACTTGTCCATT+AGG | - | chr5_1:60866319-60866338 | None:intergenic | 25.0% |
| ! | AATGGACAAGTTATCATAAT+TGG | + | chr5_1:60866319-60866338 | Msa0741280:intron | 25.0% |
| ! | ATGGACAAGTTATCATAATT+GGG | + | chr5_1:60866320-60866339 | Msa0741280:intron | 25.0% |
| ! | ACTGGGTATAAAAAAAATTG+AGG | + | chr5_1:60866469-60866488 | Msa0741280:intron | 25.0% |
| ! | AATACACCTTTACTATCTTT+AGG | + | chr5_1:60866553-60866572 | Msa0741280:intron | 25.0% |
| !! | TTTTGTCCTAAAGATAGTAA+AGG | - | chr5_1:60866562-60866581 | None:intergenic | 25.0% |
| ! | ATTAATATTCTCAGTTGGAT+CGG | + | chr5_1:60866629-60866648 | Msa0741280:intron | 25.0% |
| ! | AAACTAGTTAAGTTTGATTC+AGG | + | chr5_1:60866770-60866789 | Msa0741280:intron | 25.0% |
| ! | GTGACTTATGATTATGATTA+AGG | + | chr5_1:60866903-60866922 | Msa0741280:intron | 25.0% |
| ! | ATAACATTATGAATGTCACA+TGG | - | chr5_1:60866929-60866948 | None:intergenic | 25.0% |
| ! | CAAATATAGAACACAATAAG+AGG | + | chr5_1:60867353-60867372 | Msa0741280:intron | 25.0% |
| ! | ATCTTCAGTATAGTCATAAA+AGG | - | chr5_1:60867599-60867618 | None:intergenic | 25.0% |
| !!! | TTCCTTTTAACTGTTTTTTG+CGG | - | chr5_1:60867688-60867707 | None:intergenic | 25.0% |
| !! | TTCTTTAATTTCTCTGGATA+TGG | - | chr5_1:60867736-60867755 | None:intergenic | 25.0% |
| !! | TGGAATTTCTTTAATTTCTC+TGG | - | chr5_1:60867742-60867761 | None:intergenic | 25.0% |
| ! | AAATTAAAGAAATTCCATCC+CGG | + | chr5_1:60867745-60867764 | Msa0741280:CDS | 25.0% |
| ! | GGAATATTTCAAAGATTCAA+AGG | + | chr5_1:60867969-60867988 | Msa0741280:CDS | 25.0% |
| ! | AAAGATTCAAAGGTTTATCA+GGG | + | chr5_1:60867979-60867998 | Msa0741280:CDS | 25.0% |
| !! | CTTTTCCTTTTACACATTAT+TGG | - | chr5_1:60868132-60868151 | None:intergenic | 25.0% |
| ! | TAGAAGAGAAAGAATAAGTT+TGG | + | chr5_1:60868155-60868174 | Msa0741280:CDS | 25.0% |
| !! | TAACAAAACTTTTTGATCTC+TGG | - | chr5_1:60868209-60868228 | None:intergenic | 25.0% |
| !! | AAAATGTTGGACACAATTTT+GGG | + | chr5_1:60868236-60868255 | Msa0741280:CDS | 25.0% |
| !! | ATTACTTCAACTTTTGATGA+TGG | - | chr5_1:60868399-60868418 | None:intergenic | 25.0% |
| ! | AAGAAAACTCTACCATAAAA+TGG | + | chr5_1:60868515-60868534 | Msa0741280:CDS | 25.0% |
| !! | AGAATGATATCACCATTTTA+TGG | - | chr5_1:60868530-60868549 | None:intergenic | 25.0% |
| !! | CATTTTCTATTATTAGCATC+GGG | + | chr5_1:60868598-60868617 | Msa0741280:intron | 25.0% |
| ! | CTGAGCAAAAATTTACTATT+AGG | - | chr5_1:60868861-60868880 | None:intergenic | 25.0% |
| !! | TTTAACTTTACCTTGACAAA+TGG | - | chr5_1:60869112-60869131 | None:intergenic | 25.0% |
| ! | AATTTCTTTGTCATCAACTT+TGG | - | chr5_1:60869351-60869370 | None:intergenic | 25.0% |
| ! | TAAAAAGAAGAGTAAGAAAC+AGG | + | chr5_1:60869436-60869455 | Msa0741280:CDS | 25.0% |
| ! | AAGCAAAATGTTCATGTTAT+AGG | + | chr5_1:60869930-60869949 | Msa0741280:intron | 25.0% |
| ! | AGCAAAATGTTCATGTTATA+GGG | + | chr5_1:60869931-60869950 | Msa0741280:intron | 25.0% |
| !! | TCTTCAACATATTTCTTTTC+CGG | + | chr5_1:60870015-60870034 | Msa0741280:CDS | 25.0% |
| !! | ATTTGAATTGATTCTGGTAA+TGG | - | chr5_1:60870200-60870219 | None:intergenic | 25.0% |
| ! | AAATAAATTAAGAAGATGCC+AGG | - | chr5_1:60870411-60870430 | None:intergenic | 25.0% |
| !! | ATTTATTTGAGCCTTGTATT+TGG | + | chr5_1:60870423-60870442 | Msa0741280:intron | 25.0% |
| ! | AGATATATTAGCCAAATACA+AGG | - | chr5_1:60870437-60870456 | None:intergenic | 25.0% |
| ! | ACATATATGTTGTCTTGTAT+AGG | + | chr5_1:60870460-60870479 | Msa0741280:intron | 25.0% |
| ! | ATTATCTTAAAATGTTCTGC+AGG | + | chr5_1:60870574-60870593 | Msa0741280:intron | 25.0% |
| ! | ATATGCTAATATGTATATGC+AGG | + | chr5_1:60871034-60871053 | Msa0741280:intron | 25.0% |
| ! | TGAGAGTCTTAACAATATTA+AGG | - | chr5_1:60871605-60871624 | None:intergenic | 25.0% |
| ! | GAACATGCGTTTATAATTTA+CGG | + | chr5_1:60871645-60871664 | Msa0741280:intron | 25.0% |
| !! | TCATACAAAACTAGTTTGTA+AGG | - | chr5_1:60871680-60871699 | None:intergenic | 25.0% |
| !!! | GAAATGAAGTTTTAGCTTTT+AGG | + | chr5_1:60871955-60871974 | Msa0741280:intron | 25.0% |
| ! | TACTTAGTACATTTCATCAA+GGG | - | chr5_1:60872068-60872087 | None:intergenic | 25.0% |
| ! | TTACTTAGTACATTTCATCA+AGG | - | chr5_1:60872069-60872088 | None:intergenic | 25.0% |
| !!! | GACACATTTTTTCTTCTAAA+AGG | + | chr5_1:60872588-60872607 | Msa0741280:intron | 25.0% |
| !!! | AACATACTTTCAAGTTAATG+AGG | + | chr5_1:60872904-60872923 | Msa0741280:CDS | 25.0% |
| ! | TAAAGCTTCTATTGCATATT+TGG | + | chr5_1:60872935-60872954 | Msa0741280:intron | 25.0% |
| !! | GCAATATCTTTTTCTTTTGT+AGG | + | chr5_1:60872994-60873013 | Msa0741280:intron | 25.0% |
| !!! | CATTTTCTAGGAACATTAAT+TGG | - | chr5_1:60873049-60873068 | None:intergenic | 25.0% |
| ! | CAATTAATGTTCCTAGAAAA+TGG | + | chr5_1:60873047-60873066 | Msa0741280:CDS | 25.0% |
| !! | AAGAAACAGATAGCATATTT+TGG | + | chr5_1:60873082-60873101 | Msa0741280:CDS | 25.0% |
| ! | GAATATCATACACTATACTT+TGG | + | chr5_1:60873137-60873156 | Msa0741280:intron | 25.0% |
| ! | AAAACTTAGTTCATTTCCTT+AGG | + | chr5_1:60873188-60873207 | Msa0741280:intron | 25.0% |
| !!! | AAACTTTGGTGTATTTTCTT+AGG | - | chr5_1:60873324-60873343 | None:intergenic | 25.0% |
| !! | TTCATTAATGGACAAAACTT+TGG | - | chr5_1:60873338-60873357 | None:intergenic | 25.0% |
| ! | AAAGTTAGCACAAATACAAT+CGG | - | chr5_1:60873598-60873617 | None:intergenic | 25.0% |
| !!! | TCAAAAATAGATTGGTCTAA+TGG | - | chr5_1:60873662-60873681 | None:intergenic | 25.0% |
| ! | TAGAACTGTCAAAAATAGAT+TGG | - | chr5_1:60873670-60873689 | None:intergenic | 25.0% |
| ! | TTGTTAAGGAAACTTAAAAG+AGG | + | chr5_1:60873711-60873730 | Msa0741280:intron | 25.0% |
| ! | ATTCTATCAAATACCAATGT+AGG | + | chr5_1:60874249-60874268 | Msa0741280:intron | 25.0% |
| !! | ATTAAAGACTTCTTTTGCAA+AGG | + | chr5_1:60874288-60874307 | Msa0741280:CDS | 25.0% |
| ! | AAAATAGATGATATAGGTCT+TGG | - | chr5_1:60874437-60874456 | None:intergenic | 25.0% |
| AATTTACTATCTCTACGGTT+TGG | + | chr5_1:60865387-60865406 | Msa0741280:intron | 30.0% | |
| AGAAACATATGAACATGCTA+TGG | + | chr5_1:60865519-60865538 | Msa0741280:intron | 30.0% | |
| TTCATTACCCTTCAAAACTT+AGG | - | chr5_1:60865619-60865638 | None:intergenic | 30.0% | |
| ! | TAGCATGAGCTTTTACATTT+GGG | - | chr5_1:60865777-60865796 | None:intergenic | 30.0% |
| ! | ATAGCATGAGCTTTTACATT+TGG | - | chr5_1:60865778-60865797 | None:intergenic | 30.0% |
| !! | TTCTAAGGTCATAGATTTGT+TGG | + | chr5_1:60865939-60865958 | Msa0741280:intron | 30.0% |
| ! | TCTAAGGTCATAGATTTGTT+GGG | + | chr5_1:60865940-60865959 | Msa0741280:intron | 30.0% |
| ! | TTCGTATTGTATATTTGGTG+AGG | + | chr5_1:60866193-60866212 | Msa0741280:intron | 30.0% |
| TGGACAAGTTATCATAATTG+GGG | + | chr5_1:60866321-60866340 | Msa0741280:intron | 30.0% | |
| ATTGGAGATACTATTACTAC+TGG | + | chr5_1:60866451-60866470 | Msa0741280:intron | 30.0% | |
| TTGGAGATACTATTACTACT+GGG | + | chr5_1:60866452-60866471 | Msa0741280:intron | 30.0% | |
| ! | AGATAGTAAAGGTGTATTCA+GGG | - | chr5_1:60866551-60866570 | None:intergenic | 30.0% |
| ! | AAGATAGTAAAGGTGTATTC+AGG | - | chr5_1:60866552-60866571 | None:intergenic | 30.0% |
| CAGGTGAAAAAATTGCAATT+TGG | + | chr5_1:60866789-60866808 | Msa0741280:intron | 30.0% | |
| TAAACCAATGCAAATTGAAC+AGG | - | chr5_1:60866842-60866861 | None:intergenic | 30.0% | |
| GTGTATGGAAAAATATATGG+TGG | + | chr5_1:60867130-60867149 | Msa0741280:intron | 30.0% | |
| TTTCTTATCTATGCAAGGAT+TGG | + | chr5_1:60867404-60867423 | Msa0741280:intron | 30.0% | |
| ATGTTGAATTATGTCCACTA+GGG | + | chr5_1:60867617-60867636 | Msa0741280:intron | 30.0% | |
| !! | CTTTTATTTAAAGACCCTAG+TGG | - | chr5_1:60867634-60867653 | None:intergenic | 30.0% |
| CACTAGGGTCTTTAAATAAA+AGG | + | chr5_1:60867632-60867651 | Msa0741280:intron | 30.0% | |
| ! | GCTGATCATTAACATCATTT+TGG | - | chr5_1:60867666-60867685 | None:intergenic | 30.0% |
| GAAGAAATATCAACCTAAAG+TGG | + | chr5_1:60867705-60867724 | Msa0741280:CDS | 30.0% | |
| CAAAGATTCAAAGGTTTATC+AGG | + | chr5_1:60867978-60867997 | Msa0741280:CDS | 30.0% | |
| TTGTTACGAAGAGAAAATGT+TGG | + | chr5_1:60868223-60868242 | Msa0741280:CDS | 30.0% | |
| ! | GAAAATGTTGGACACAATTT+TGG | + | chr5_1:60868235-60868254 | Msa0741280:CDS | 30.0% |
| !!! | TCGATGCATTTTTTTCTTCA+AGG | - | chr5_1:60868319-60868338 | None:intergenic | 30.0% |
| AAGAGAATGATGAACATAAG+AGG | + | chr5_1:60868475-60868494 | Msa0741280:CDS | 30.0% | |
| !!! | AAACCAACCTTTTTTTTAGC+AGG | + | chr5_1:60868669-60868688 | Msa0741280:intron | 30.0% |
| ATTTCCTGAAATTTGTCCAT+GGG | - | chr5_1:60868696-60868715 | None:intergenic | 30.0% | |
| TGGAAAAGAAAATGCAACAT+TGG | + | chr5_1:60869489-60869508 | Msa0741280:CDS | 30.0% | |
| GGAAAAGAAAATGCAACATT+GGG | + | chr5_1:60869490-60869509 | Msa0741280:CDS | 30.0% | |
| ATTCTAAATTCATGCTTCCA+TGG | - | chr5_1:60869784-60869803 | None:intergenic | 30.0% | |
| ! | ATGGAAGCATGAATTTAGAA+TGG | + | chr5_1:60869783-60869802 | Msa0741280:CDS | 30.0% |
| TACACTTACTTTGCTTCATT+TGG | - | chr5_1:60869824-60869843 | None:intergenic | 30.0% | |
| GTGTCTACTTATATTCTTAC+CGG | - | chr5_1:60870037-60870056 | None:intergenic | 30.0% | |
| ! | TGAAATATGTCACTTCTGAA+AGG | + | chr5_1:60870121-60870140 | Msa0741280:intron | 30.0% |
| !! | ATTCTGGTAATGGTTGTAAA+GGG | - | chr5_1:60870190-60870209 | None:intergenic | 30.0% |
| !!! | TAACCATGTTGTTTTGAAAC+AGG | + | chr5_1:60870310-60870329 | Msa0741280:intron | 30.0% |
| AAACCTGTTTCAAAACAACA+TGG | - | chr5_1:60870316-60870335 | None:intergenic | 30.0% | |
| !!! | TGTTGAATTTTGATTGGATC+CGG | - | chr5_1:60870339-60870358 | None:intergenic | 30.0% |
| !! | CATTATCAGTTGATAACCTT+TGG | + | chr5_1:60870492-60870511 | Msa0741280:CDS | 30.0% |
| GTTAATATGTACCTTTCCAA+AGG | - | chr5_1:60870511-60870530 | None:intergenic | 30.0% | |
| GACAATGCATATATATAACG+TGG | + | chr5_1:60870760-60870779 | Msa0741280:intron | 30.0% | |
| AAACAATGCATATGTGTATG+TGG | - | chr5_1:60870962-60870981 | None:intergenic | 30.0% | |
| AGTCAATATTAGGGAGTAAA+TGG | - | chr5_1:60870985-60871004 | None:intergenic | 30.0% | |
| !! | TTACTCCCTAATATTGACTT+TGG | + | chr5_1:60870986-60871005 | Msa0741280:intron | 30.0% |
| CACTCTCATAAGTATAATCA+TGG | - | chr5_1:60871278-60871297 | None:intergenic | 30.0% | |
| TGACTACTGAAGTTAAATGT+TGG | - | chr5_1:60871321-60871340 | None:intergenic | 30.0% | |
| !!! | TTTTTTGAAGAGTTTGACCA+TGG | + | chr5_1:60871372-60871391 | Msa0741280:CDS | 30.0% |
| AAATGACTGTTTGTAGCATT+TGG | - | chr5_1:60871432-60871451 | None:intergenic | 30.0% | |
| CTCTCATATTAGATGAGATA+TGG | + | chr5_1:60871619-60871638 | Msa0741280:intron | 30.0% | |
| AAAGATGATGATAACACTCT+TGG | - | chr5_1:60871726-60871745 | None:intergenic | 30.0% | |
| ! | GTAAATAGTTGATATGCATG+TGG | + | chr5_1:60872085-60872104 | Msa0741280:intron | 30.0% |
| ATGTTCCATTCAAAGGAAAA+CGG | - | chr5_1:60872889-60872908 | None:intergenic | 30.0% | |
| ! | TGAAAGTATGTTCCATTCAA+AGG | - | chr5_1:60872896-60872915 | None:intergenic | 30.0% |
| ATGTTCCTAGAAAATGGATA+TGG | + | chr5_1:60873053-60873072 | Msa0741280:CDS | 30.0% | |
| ! | AGATTCCATATCCATTTTCT+AGG | - | chr5_1:60873061-60873080 | None:intergenic | 30.0% |
| !!! | AGATAGCATATTTTGGTACT+GGG | + | chr5_1:60873089-60873108 | Msa0741280:CDS | 30.0% |
| ACTCTTGTTAATAAGTAGAG+CGG | + | chr5_1:60873547-60873566 | Msa0741280:intron | 30.0% | |
| ! | TTCTATTATCGAAGTTCTGA+AGG | + | chr5_1:60873685-60873704 | Msa0741280:intron | 30.0% |
| TTAAGGAAACTTAAAAGAGG+AGG | + | chr5_1:60873714-60873733 | Msa0741280:intron | 30.0% | |
| !!! | TGGGTTTTGAAAAAAAAGGA+AGG | + | chr5_1:60873814-60873833 | Msa0741280:intron | 30.0% |
| GGAAGAAATAGAAGAACATT+AGG | + | chr5_1:60873844-60873863 | Msa0741280:intron | 30.0% | |
| AGAAATAGAAGAACATTAGG+AGG | + | chr5_1:60873847-60873866 | Msa0741280:intron | 30.0% | |
| ! | TTGTTTAGTTCCTCAAAATG+AGG | - | chr5_1:60873917-60873936 | None:intergenic | 30.0% |
| TATTAGAAGAGAGTTTCGAA+AGG | + | chr5_1:60873940-60873959 | Msa0741280:intron | 30.0% | |
| ! | CTTTGTTTGGATGTTTAGAA+GGG | - | chr5_1:60874137-60874156 | None:intergenic | 30.0% |
| AAATGTTAACAAGTGTCCTA+AGG | - | chr5_1:60874160-60874179 | None:intergenic | 30.0% | |
| TAAAAAGAAACGGCTAGAAT+TGG | + | chr5_1:60874197-60874216 | Msa0741280:intron | 30.0% | |
| AGAGCAATTGATACAAAAAC+AGG | + | chr5_1:60874407-60874426 | Msa0741280:CDS | 30.0% | |
| CGATGCAAAATAGATGATAT+AGG | - | chr5_1:60874443-60874462 | None:intergenic | 30.0% | |
| AACAAACATTTCACAGCGAA+AGG | - | chr5_1:60865454-60865473 | None:intergenic | 35.0% | |
| !! | CTTGATGATGTTGTTTCAAG+TGG | + | chr5_1:60865571-60865590 | Msa0741280:intron | 35.0% |
| GTGTCTAGTAACCTGATATA+TGG | - | chr5_1:60865809-60865828 | None:intergenic | 35.0% | |
| ACTAGACACTAATCACTTGA+TGG | + | chr5_1:60865820-60865839 | Msa0741280:intron | 35.0% | |
| CTAGACACTAATCACTTGAT+GGG | + | chr5_1:60865821-60865840 | Msa0741280:intron | 35.0% | |
| TAGACACTAATCACTTGATG+GGG | + | chr5_1:60865822-60865841 | Msa0741280:intron | 35.0% | |
| GCAATTACTATGTGATAGAG+TGG | + | chr5_1:60865858-60865877 | Msa0741280:intron | 35.0% | |
| !! | TGGCGTTACAAGTTATTTCT+AGG | + | chr5_1:60865878-60865897 | Msa0741280:intron | 35.0% |
| !! | GGCGTTACAAGTTATTTCTA+GGG | + | chr5_1:60865879-60865898 | Msa0741280:intron | 35.0% |
| !! | GCGTTACAAGTTATTTCTAG+GGG | + | chr5_1:60865880-60865899 | Msa0741280:intron | 35.0% |
| ! | TGGAAGTGAATCGATTTCTA+AGG | + | chr5_1:60865924-60865943 | Msa0741280:intron | 35.0% |
| ! | CGAATGAAGACTCTTTTTGA+AGG | - | chr5_1:60866118-60866137 | None:intergenic | 35.0% |
| TTGCTTCAGTAAATACACGT+AGG | - | chr5_1:60866157-60866176 | None:intergenic | 35.0% | |
| ! | TTTTTCCAGCCATCTATGAT+TGG | + | chr5_1:60866370-60866389 | Msa0741280:intron | 35.0% |
| ACTTCCATTCCAATCATAGA+TGG | - | chr5_1:60866382-60866401 | None:intergenic | 35.0% | |
| TTGCTGGAATGGAGATATTA+AGG | + | chr5_1:60866401-60866420 | Msa0741280:intron | 35.0% | |
| TGCTGGAATGGAGATATTAA+GGG | + | chr5_1:60866402-60866421 | Msa0741280:intron | 35.0% | |
| ! | GATAGTAAAGGTGTATTCAG+GGG | - | chr5_1:60866550-60866569 | None:intergenic | 35.0% |
| TTGGATCGGATTCATATTAG+AGG | + | chr5_1:60866643-60866662 | Msa0741280:intron | 35.0% | |
| ATCATAAGTCACTCAAGTCT+AGG | - | chr5_1:60866895-60866914 | None:intergenic | 35.0% | |
| !!! | GAATTTTGGGTGCTATTTGA+AGG | + | chr5_1:60866980-60866999 | Msa0741280:intron | 35.0% |
| TGTAGTCATAGTCGAGAAAT+AGG | - | chr5_1:60867082-60867101 | None:intergenic | 35.0% | |
| TTTCTCGACTATGACTACAT+TGG | + | chr5_1:60867083-60867102 | Msa0741280:intron | 35.0% | |
| !! | ACTATGACTACATTGGTTCA+AGG | + | chr5_1:60867090-60867109 | Msa0741280:intron | 35.0% |
| TGGTATCAAGTCAATGTGTA+TGG | + | chr5_1:60867115-60867134 | Msa0741280:intron | 35.0% | |
| TCTCAAATAGGAAGCTCAAT+TGG | - | chr5_1:60867317-60867336 | None:intergenic | 35.0% | |
| GATGTTGAATTATGTCCACT+AGG | + | chr5_1:60867616-60867635 | Msa0741280:intron | 35.0% | |
| AGCCGCAAAAAACAGTTAAA+AGG | + | chr5_1:60867683-60867702 | Msa0741280:CDS | 35.0% | |
| ! | ACATAACTTTTCCTCTGCTT+CGG | - | chr5_1:60867799-60867818 | None:intergenic | 35.0% |
| ! | ACATAACTTTTCCTCTGCTT+CGG | - | chr5_1:60867799-60867818 | None:intergenic | 35.0% |
| ! | AATAATGGCTTTTGACACTC+AGG | - | chr5_1:60867913-60867932 | None:intergenic | 35.0% |
| ! | TTCCATCTCTTTCCCATTTT+TGG | + | chr5_1:60867948-60867967 | Msa0741280:CDS | 35.0% |
| TTCCAAAAATGGGAAAGAGA+TGG | - | chr5_1:60867953-60867972 | None:intergenic | 35.0% | |
| ATCTGCCATCGTATACAATT+CGG | + | chr5_1:60868032-60868051 | Msa0741280:CDS | 35.0% | |
| TTGTACCGAATTGTATACGA+TGG | - | chr5_1:60868040-60868059 | None:intergenic | 35.0% | |
| CAGAAAATGACTTCATTGTC+AGG | + | chr5_1:60868066-60868085 | Msa0741280:CDS | 35.0% | |
| GTTTATGTCTAGTTGAGAGT+AGG | + | chr5_1:60868088-60868107 | Msa0741280:CDS | 35.0% | |
| !!! | CAAAGATCTCATTTTTTGGC+TGG | - | chr5_1:60868280-60868299 | None:intergenic | 35.0% |
| AGAATGATGAACATAAGAGG+AGG | + | chr5_1:60868478-60868497 | Msa0741280:CDS | 35.0% | |
| ! | ATGAACATAAGAGGAGGTAT+TGG | + | chr5_1:60868484-60868503 | Msa0741280:CDS | 35.0% |
| !! | TGAACATAAGAGGAGGTATT+GGG | + | chr5_1:60868485-60868504 | Msa0741280:CDS | 35.0% |
| CATTTCCTGAAATTTGTCCA+TGG | - | chr5_1:60868697-60868716 | None:intergenic | 35.0% | |
| TTGCTCAGCATAGATATCAA+TGG | + | chr5_1:60868873-60868892 | Msa0741280:intron | 35.0% | |
| TGCTCAGCATAGATATCAAT+GGG | + | chr5_1:60868874-60868893 | Msa0741280:intron | 35.0% | |
| CATCGCTAACTAATTTGACA+GGG | - | chr5_1:60869229-60869248 | None:intergenic | 35.0% | |
| TCATCGCTAACTAATTTGAC+AGG | - | chr5_1:60869230-60869249 | None:intergenic | 35.0% | |
| CGATGAGCAAAACAAAAACA+TGG | + | chr5_1:60869244-60869263 | Msa0741280:CDS | 35.0% | |
| AAAGAAGAGTAAGAAACAGG+AGG | + | chr5_1:60869439-60869458 | Msa0741280:CDS | 35.0% | |
| !! | TGTGTTGATCACTTTTAGAG+TGG | - | chr5_1:60869532-60869551 | None:intergenic | 35.0% |
| AAGGGATTTATGGATAACCA+TGG | + | chr5_1:60869764-60869783 | Msa0741280:CDS | 35.0% | |
| ACTTACTTTGCTTCATTTGG+TGG | - | chr5_1:60869821-60869840 | None:intergenic | 35.0% | |
| ! | AATATGTCACTTCTGAAAGG+TGG | + | chr5_1:60870124-60870143 | Msa0741280:intron | 35.0% |
| TGAAAGGTGGATGTAAATGT+TGG | + | chr5_1:60870137-60870156 | Msa0741280:intron | 35.0% | |
| AATTGTTGTACGATTGGGAT+GGG | + | chr5_1:60870163-60870182 | Msa0741280:CDS | 35.0% | |
| !! | GATTCTGGTAATGGTTGTAA+AGG | - | chr5_1:60870191-60870210 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGAAACAGGTTTC+CGG | + | chr5_1:60870317-60870336 | Msa0741280:intron | 35.0% |
| TGATCAAGTTTGCATAGTCT+TGG | - | chr5_1:60870372-60870391 | None:intergenic | 35.0% | |
| CATCATACATTGTAACTACC+TGG | + | chr5_1:60870390-60870409 | Msa0741280:intron | 35.0% | |
| !! | TCAGTTGATAACCTTTGGAA+AGG | + | chr5_1:60870497-60870516 | Msa0741280:CDS | 35.0% |
| TATTTACACTCGTCCTTCAT+CGG | - | chr5_1:60870638-60870657 | None:intergenic | 35.0% | |
| ATTATGCAAGTTCTCTTGCA+AGG | + | chr5_1:60870657-60870676 | Msa0741280:CDS | 35.0% | |
| TCTTACAATTAGGTGTGAAG+AGG | - | chr5_1:60870930-60870949 | None:intergenic | 35.0% | |
| ACAATTGATTGATCTGTGGT+TGG | - | chr5_1:60871084-60871103 | None:intergenic | 35.0% | |
| TGCTACAATTGATTGATCTG+TGG | - | chr5_1:60871088-60871107 | None:intergenic | 35.0% | |
| ATCAATTGTAGCAACCCAAA+TGG | + | chr5_1:60871095-60871114 | Msa0741280:CDS | 35.0% | |
| GTATGGGAAACAATATGCAT+TGG | - | chr5_1:60871127-60871146 | None:intergenic | 35.0% | |
| AATGATGTGCTTTCATGTTC+GGG | - | chr5_1:60871234-60871253 | None:intergenic | 35.0% | |
| CAATGATGTGCTTTCATGTT+CGG | - | chr5_1:60871235-60871254 | None:intergenic | 35.0% | |
| AAAAATTACCATACATCGGC+AGG | - | chr5_1:60871356-60871375 | None:intergenic | 35.0% | |
| AAAGAATAGCATGCATTGTC+AGG | - | chr5_1:60871843-60871862 | None:intergenic | 35.0% | |
| ! | ACTACTTCAAGTGCTTTAAG+TGG | + | chr5_1:60871923-60871942 | Msa0741280:intron | 35.0% |
| GGACATAACTGAACAGATAA+AGG | - | chr5_1:60872289-60872308 | None:intergenic | 35.0% | |
| TTGAAAGAGAGCTTGTCTTT+AGG | + | chr5_1:60872565-60872584 | Msa0741280:intron | 35.0% | |
| TGAAAGAGAGCTTGTCTTTA+GGG | + | chr5_1:60872566-60872585 | Msa0741280:intron | 35.0% | |
| TGTTCCATTCAAAGGAAAAC+GGG | - | chr5_1:60872888-60872907 | None:intergenic | 35.0% | |
| !!! | CAGATAGCATATTTTGGTAC+TGG | + | chr5_1:60873088-60873107 | Msa0741280:CDS | 35.0% |
| !! | AATCATATGAAGAGCACCTA+AGG | - | chr5_1:60873207-60873226 | None:intergenic | 35.0% |
| TAATAAGTAGAGCGGTCAAA+TGG | + | chr5_1:60873555-60873574 | Msa0741280:intron | 35.0% | |
| ACATGATCCAACCAAAAGTA+TGG | + | chr5_1:60873623-60873642 | Msa0741280:intron | 35.0% | |
| ! | CATGATCCAACCAAAAGTAT+GGG | + | chr5_1:60873624-60873643 | Msa0741280:intron | 35.0% |
| ! | CATTATCCCATACTTTTGGT+TGG | - | chr5_1:60873633-60873652 | None:intergenic | 35.0% |
| ! | CAACCAAAAGTATGGGATAA+TGG | + | chr5_1:60873631-60873650 | Msa0741280:intron | 35.0% |
| !! | AAAAGTATGGGATAATGGAC+CGG | + | chr5_1:60873636-60873655 | Msa0741280:intron | 35.0% |
| !! | AAATAGATTGGTCTAATGGC+CGG | - | chr5_1:60873658-60873677 | None:intergenic | 35.0% |
| !! | AGAGGAGGTTTTGTATTGAA+AGG | + | chr5_1:60873729-60873748 | Msa0741280:intron | 35.0% |
| AAAAAAAAGGAAGGAGCAAG+TGG | + | chr5_1:60873823-60873842 | Msa0741280:intron | 35.0% | |
| ! | ACATTAGGAGGAGAAGATTT+TGG | + | chr5_1:60873859-60873878 | Msa0741280:intron | 35.0% |
| TTAGTTCCTCAAAATGAGGA+GGG | - | chr5_1:60873913-60873932 | None:intergenic | 35.0% | |
| ! | TTTAGTTCCTCAAAATGAGG+AGG | - | chr5_1:60873914-60873933 | None:intergenic | 35.0% |
| TTTGGATGTTTAGAAGGGAA+GGG | - | chr5_1:60874132-60874151 | None:intergenic | 35.0% | |
| !! | GCTTTGTTTGGATGTTTAGA+AGG | - | chr5_1:60874138-60874157 | None:intergenic | 35.0% |
| AAACATCCAAACAAAGCCTT+AGG | + | chr5_1:60874141-60874160 | Msa0741280:intron | 35.0% | |
| TACCAATGTAGGTTTGTCAA+TGG | + | chr5_1:60874260-60874279 | Msa0741280:intron | 35.0% | |
| TTCCATTGACAAACCTACAT+TGG | - | chr5_1:60874265-60874284 | None:intergenic | 35.0% | |
| ! | TATTTTGCATCGCAACACAA+CGG | + | chr5_1:60874451-60874470 | Msa0741280:CDS | 35.0% |
| ACAATTCAGGCATAGATGTG+AGG | - | chr5_1:60865355-60865374 | None:intergenic | 40.0% | |
| !! | CGAAAGGTTCACAGTTTTGT+GGG | - | chr5_1:60865438-60865457 | None:intergenic | 40.0% |
| !! | TTGATGGGGCAGGTTTTATA+TGG | + | chr5_1:60865836-60865855 | Msa0741280:intron | 40.0% |
| AAATACACCCAGGGAGAATT+CGG | + | chr5_1:60865995-60866014 | Msa0741280:intron | 40.0% | |
| ! | ACACGTAGGAAGTCTCTTTT+TGG | - | chr5_1:60866143-60866162 | None:intergenic | 40.0% |
| TTATCATAATTGGGGCTGAG+AGG | + | chr5_1:60866329-60866348 | Msa0741280:intron | 40.0% | |
| GGAAAAAGACTTCTAGGCAA+CGG | - | chr5_1:60866357-60866376 | None:intergenic | 40.0% | |
| ATGGCTGGAAAAAGACTTCT+AGG | - | chr5_1:60866363-60866382 | None:intergenic | 40.0% | |
| ATGATTGGAATGGAAGTTGC+TGG | + | chr5_1:60866385-60866404 | Msa0741280:intron | 40.0% | |
| GCTGGAATGGAGATATTAAG+GGG | + | chr5_1:60866403-60866422 | Msa0741280:intron | 40.0% | |
| CTGGAATGGAGATATTAAGG+GGG | + | chr5_1:60866404-60866423 | Msa0741280:intron | 40.0% | |
| TGGTCCTGTTCAATTTGCAT+TGG | + | chr5_1:60866835-60866854 | Msa0741280:intron | 40.0% | |
| !! | GACTACATTGGTTCAAGGTT+TGG | + | chr5_1:60867095-60867114 | Msa0741280:intron | 40.0% |
| CGCTCTTTCTTATCTATGCA+AGG | + | chr5_1:60867399-60867418 | Msa0741280:intron | 40.0% | |
| ! | AGTGTTGTTGTCATGAGTGT+TGG | - | chr5_1:60867833-60867852 | None:intergenic | 40.0% |
| ! | CTTTTGACACTCAGGAAACT+TGG | - | chr5_1:60867905-60867924 | None:intergenic | 40.0% |
| AAGCCATTATTCGTCGATGA+TGG | + | chr5_1:60867922-60867941 | Msa0741280:CDS | 40.0% | |
| TCTCCATCATCGACGAATAA+TGG | - | chr5_1:60867928-60867947 | None:intergenic | 40.0% | |
| GATTCAAAGGTTTATCAGGG+TGG | + | chr5_1:60867982-60868001 | Msa0741280:CDS | 40.0% | |
| CTAGTTGAGAGTAGGAGAAT+TGG | + | chr5_1:60868096-60868115 | Msa0741280:CDS | 40.0% | |
| AGAGATGTCTGCAAAAAGTC+AGG | + | chr5_1:60868351-60868370 | Msa0741280:CDS | 40.0% | |
| GAGATGTCTGCAAAAAGTCA+GGG | + | chr5_1:60868352-60868371 | Msa0741280:CDS | 40.0% | |
| AGATGTCTGCAAAAAGTCAG+GGG | + | chr5_1:60868353-60868372 | Msa0741280:CDS | 40.0% | |
| ACGAAGAGACATTACGAGTA+TGG | + | chr5_1:60868424-60868443 | Msa0741280:CDS | 40.0% | |
| GATCAAGTGCATACTGTTCA+AGG | + | chr5_1:60868552-60868571 | Msa0741280:CDS | 40.0% | |
| GGTCCTGCTAAAAAAAAGGT+TGG | - | chr5_1:60868675-60868694 | None:intergenic | 40.0% | |
| CATGGGTCCTGCTAAAAAAA+AGG | - | chr5_1:60868679-60868698 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTTAGCAGGACCCA+TGG | + | chr5_1:60868677-60868696 | Msa0741280:intron | 40.0% |
| ACAGAGCATAGCATACAATG+TGG | - | chr5_1:60868771-60868790 | None:intergenic | 40.0% | |
| GTGATAGACGATTCTTACCA+TGG | + | chr5_1:60869030-60869049 | Msa0741280:CDS | 40.0% | |
| AGACGATTCTTACCATGGAA+AGG | + | chr5_1:60869035-60869054 | Msa0741280:CDS | 40.0% | |
| ATGTGTCTGACCATTTGTCA+AGG | + | chr5_1:60869099-60869118 | Msa0741280:CDS | 40.0% | |
| GTGACATAAATGCAGAGCTT+TGG | - | chr5_1:60869193-60869212 | None:intergenic | 40.0% | |
| ATAGTTCGTGTTCCATAGAG+AGG | + | chr5_1:60869375-60869394 | Msa0741280:CDS | 40.0% | |
| AGAATCTGAGTTCCTCTCTA+TGG | - | chr5_1:60869390-60869409 | None:intergenic | 40.0% | |
| ATCATGCGAACTCTGTTGAT+TGG | + | chr5_1:60869555-60869574 | Msa0741280:CDS | 40.0% | |
| ! | TCATGCGAACTCTGTTGATT+GGG | + | chr5_1:60869556-60869575 | Msa0741280:CDS | 40.0% |
| ATATTTGTAGCGTGCACTGA+AGG | + | chr5_1:60869745-60869764 | Msa0741280:intron | 40.0% | |
| TATTTGTAGCGTGCACTGAA+GGG | + | chr5_1:60869746-60869765 | Msa0741280:intron | 40.0% | |
| TGGACGAATTGTTGTACGAT+TGG | + | chr5_1:60870157-60870176 | Msa0741280:CDS | 40.0% | |
| GGACGAATTGTTGTACGATT+GGG | + | chr5_1:60870158-60870177 | Msa0741280:CDS | 40.0% | |
| GAATTGTTGTACGATTGGGA+TGG | + | chr5_1:60870162-60870181 | Msa0741280:CDS | 40.0% | |
| ! | TCGGACAAGCATTGCAATTT+GGG | - | chr5_1:60870619-60870638 | None:intergenic | 40.0% |
| ! | ATCGGACAAGCATTGCAATT+TGG | - | chr5_1:60870620-60870639 | None:intergenic | 40.0% |
| !!! | GATTGATCTGTGGTTGGTTT+TGG | - | chr5_1:60871078-60871097 | None:intergenic | 40.0% |
| ! | TGCATTGGCATGATCCATTT+GGG | - | chr5_1:60871112-60871131 | None:intergenic | 40.0% |
| ! | ATGCATTGGCATGATCCATT+TGG | - | chr5_1:60871113-60871132 | None:intergenic | 40.0% |
| GTTTCCCATACTCTGATTGT+TGG | + | chr5_1:60871136-60871155 | Msa0741280:CDS | 40.0% | |
| TGCTCCAACAATCAGAGTAT+GGG | - | chr5_1:60871143-60871162 | None:intergenic | 40.0% | |
| TTGCTCCAACAATCAGAGTA+TGG | - | chr5_1:60871144-60871163 | None:intergenic | 40.0% | |
| TGAGAGTGACGAAGATATTG+AGG | + | chr5_1:60871290-60871309 | Msa0741280:CDS | 40.0% | |
| ! | ATTGTGAAGCATTAACGCCA+TGG | - | chr5_1:60871392-60871411 | None:intergenic | 40.0% |
| ! | GTGCTTTAAGTGGATGTGTT+TGG | + | chr5_1:60871933-60871952 | Msa0741280:intron | 40.0% |
| !!! | GCCTGAAAACTGTTGCTTTT+TGG | + | chr5_1:60871991-60872010 | Msa0741280:intron | 40.0% |
| ! | GCCAAAAAGCAACAGTTTTC+AGG | - | chr5_1:60871995-60872014 | None:intergenic | 40.0% |
| TCTGTTCAGTTATGTCCTCA+CGG | + | chr5_1:60872292-60872311 | Msa0741280:intron | 40.0% | |
| CCATACAACCAGAAGATAAG+GGG | - | chr5_1:60872456-60872475 | None:intergenic | 40.0% | |
| GCCATACAACCAGAAGATAA+GGG | - | chr5_1:60872457-60872476 | None:intergenic | 40.0% | |
| AGCCATACAACCAGAAGATA+AGG | - | chr5_1:60872458-60872477 | None:intergenic | 40.0% | |
| !! | ATAAACACAGAAGGAGTACC+TGG | - | chr5_1:60872482-60872501 | None:intergenic | 40.0% |
| TAAAGCCGATCTAGAAAGCT+CGG | + | chr5_1:60872679-60872698 | Msa0741280:intron | 40.0% | |
| AGTCAGACTGAAACAGTTCT+TGG | + | chr5_1:60872740-60872759 | Msa0741280:CDS | 40.0% | |
| AACAGTTCTTGGAACACTTC+TGG | + | chr5_1:60872751-60872770 | Msa0741280:CDS | 40.0% | |
| ! | GGTCCATTATCCCATACTTT+TGG | - | chr5_1:60873637-60873656 | None:intergenic | 40.0% |
| !! | AGTTCTGAAGGCACTTGTTA+AGG | + | chr5_1:60873697-60873716 | Msa0741280:intron | 40.0% |
| !!! | GGGGTGGGTTTTGAAAAAAA+AGG | + | chr5_1:60873810-60873829 | Msa0741280:intron | 40.0% |
| ! | TTAGGAGGAGAAGATTTTGG+AGG | + | chr5_1:60873862-60873881 | Msa0741280:intron | 40.0% |
| ! | TAGGAGGAGAAGATTTTGGA+GGG | + | chr5_1:60873863-60873882 | Msa0741280:intron | 40.0% |
| GTTTGGATGTTTAGAAGGGA+AGG | - | chr5_1:60874133-60874152 | None:intergenic | 40.0% | |
| !! | AAGTGTCCTAAGGCTTTGTT+TGG | - | chr5_1:60874150-60874169 | None:intergenic | 40.0% |
| ! | GCGAAAGGTTCACAGTTTTG+TGG | - | chr5_1:60865439-60865458 | None:intergenic | 45.0% |
| CCATTCCAATCATAGATGGC+TGG | - | chr5_1:60866378-60866397 | None:intergenic | 45.0% | |
| CCAGCCATCTATGATTGGAA+TGG | + | chr5_1:60866375-60866394 | Msa0741280:intron | 45.0% | |
| TGGAATGGAAGTTGCTGGAA+TGG | + | chr5_1:60866390-60866409 | Msa0741280:intron | 45.0% | |
| AAAATTGAGGCCCATCCTTG+AGG | + | chr5_1:60866482-60866501 | Msa0741280:intron | 45.0% | |
| AAATTGAGGCCCATCCTTGA+GGG | + | chr5_1:60866483-60866502 | Msa0741280:intron | 45.0% | |
| ! | GCTGCGGTGAGTATTTCTTT+TGG | - | chr5_1:60867189-60867208 | None:intergenic | 45.0% |
| GAAGCTCAATTGGTGAGTTG+AGG | - | chr5_1:60867307-60867326 | None:intergenic | 45.0% | |
| GGATATGGAGACACCACTTT+AGG | - | chr5_1:60867721-60867740 | None:intergenic | 45.0% | |
| !!! | TTTTGGAGTGTCGTTGCTTC+CGG | - | chr5_1:60867767-60867786 | None:intergenic | 45.0% |
| ! | TGCTTCGGAGTTGAAGGTTT+TGG | - | chr5_1:60867784-60867803 | None:intergenic | 45.0% |
| !! | GTTGTTGTCATGAGTGTTGG+CGG | - | chr5_1:60867830-60867849 | None:intergenic | 45.0% |
| ! | TGCTTCGGAGTTGAAGGTTT+TGG | - | chr5_1:60867784-60867803 | None:intergenic | 45.0% |
| ! | TGGACACAATTTTGGGCAGA+AGG | + | chr5_1:60868243-60868262 | Msa0741280:CDS | 45.0% |
| AGGACCCATGGACAAATTTC+AGG | + | chr5_1:60868689-60868708 | Msa0741280:intron | 45.0% | |
| TATGCTATGCTCTGTTCGAC+TGG | + | chr5_1:60868776-60868795 | Msa0741280:intron | 45.0% | |
| ! | ACCATGGAAAGGCTCAGTTT+TGG | + | chr5_1:60869046-60869065 | Msa0741280:CDS | 45.0% |
| TCCAAAACTGAGCCTTTCCA+TGG | - | chr5_1:60869050-60869069 | None:intergenic | 45.0% | |
| !!! | AGGCTCAGTTTTGGATTCTG+TGG | + | chr5_1:60869055-60869074 | Msa0741280:CDS | 45.0% |
| !!! | GGCTCAGTTTTGGATTCTGT+GGG | + | chr5_1:60869056-60869075 | Msa0741280:CDS | 45.0% |
| !!! | TCAGTTTTGGATTCTGTGGG+TGG | + | chr5_1:60869059-60869078 | Msa0741280:CDS | 45.0% |
| ! | CATTTATGTCACTTGCTGCG+AGG | + | chr5_1:60869201-60869220 | Msa0741280:CDS | 45.0% |
| GGAACTCAGATTCTCGTAGT+AGG | + | chr5_1:60869396-60869415 | Msa0741280:CDS | 45.0% | |
| ACTCAGATTCTCGTAGTAGG+AGG | + | chr5_1:60869399-60869418 | Msa0741280:CDS | 45.0% | |
| GCTGAAGCTATTGAAAAGCG+TGG | + | chr5_1:60869611-60869630 | Msa0741280:CDS | 45.0% | |
| ! | TGGACTGGGTTTGAAAAGTG+TGG | + | chr5_1:60869973-60869992 | Msa0741280:CDS | 45.0% |
| TTGCAATGCTTGTCCGATGA+AGG | + | chr5_1:60870622-60870641 | Msa0741280:CDS | 45.0% | |
| !!! | TGTGGTTGGTTTTGGTGGTA+AGG | - | chr5_1:60871070-60871089 | None:intergenic | 45.0% |
| !!! | TGATCTGTGGTTGGTTTTGG+TGG | - | chr5_1:60871075-60871094 | None:intergenic | 45.0% |
| GATGCGGGCATCTCAATTAT+AGG | - | chr5_1:60871210-60871229 | None:intergenic | 45.0% | |
| ! | TAATCACCCTCTTCTAGCTG+AGG | + | chr5_1:60872316-60872335 | Msa0741280:CDS | 45.0% |
| GATGGATCATCATGTTCTCG+TGG | - | chr5_1:60872434-60872453 | None:intergenic | 45.0% | |
| TGATCCATCCCCTTATCTTC+TGG | + | chr5_1:60872445-60872464 | Msa0741280:CDS | 45.0% | |
| ACAACCAGAAGATAAGGGGA+TGG | - | chr5_1:60872452-60872471 | None:intergenic | 45.0% | |
| ! | CCCCTTATCTTCTGGTTGTA+TGG | + | chr5_1:60872453-60872472 | Msa0741280:CDS | 45.0% |
| AAAGCCGATCTAGAAAGCTC+GGG | + | chr5_1:60872680-60872699 | Msa0741280:intron | 45.0% | |
| !! | AAGCAAGACTGACTTGCATG+AGG | + | chr5_1:60872709-60872728 | Msa0741280:CDS | 45.0% |
| ! | AGAGCCCGTTTTCCTTTGAA+TGG | + | chr5_1:60872881-60872900 | Msa0741280:CDS | 45.0% |
| TAGAGCGGTCAAATGGATCA+AGG | + | chr5_1:60873562-60873581 | Msa0741280:intron | 45.0% | |
| !! | GATAGCCTTGTTTGCGAGTT+TGG | + | chr5_1:60873776-60873795 | Msa0741280:intron | 45.0% |
| ! | ACACAACCCTCCTCATTTTG+AGG | + | chr5_1:60873904-60873923 | Msa0741280:intron | 45.0% |
| TTTAGAAGGGAAGGGAAGAG+AGG | - | chr5_1:60874124-60874143 | None:intergenic | 45.0% | |
| !!! | AAATTTTTATAATAATAAAG+TGG | + | chr5_1:60866583-60866602 | Msa0741280:intron | 5.0% |
| !!! | TTATATGAATATTTTATAAT+TGG | + | chr5_1:60867029-60867048 | Msa0741280:intron | 5.0% |
| !! | AAAAAAAAAAAAAAACTTTA+CGG | - | chr5_1:60870247-60870266 | None:intergenic | 5.0% |
| !! | TAAATAAATACAATAAAAAA+GGG | - | chr5_1:60871877-60871896 | None:intergenic | 5.0% |
| !! | ATAAATAAATACAATAAAAA+AGG | - | chr5_1:60871878-60871897 | None:intergenic | 5.0% |
| !!! | TTTTATTTGTAAAAAAAATT+GGG | - | chr5_1:60872809-60872828 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTACAAATAAAA+GGG | + | chr5_1:60872809-60872828 | Msa0741280:intron | 5.0% |
| !!! | ATTTTAAGATAAATAAATAA+CGG | + | chr5_1:60873260-60873279 | Msa0741280:intron | 5.0% |
| !! | AATAAATATTAAATAGTAAA+TGG | - | chr5_1:60873404-60873423 | None:intergenic | 5.0% |
| CGAGCTGATGTTTCGTCTCA+AGG | + | chr5_1:60865304-60865323 | Msa0741280:CDS | 50.0% | |
| TAGATGTGAGGCGAGGCATA+GGG | - | chr5_1:60865343-60865362 | None:intergenic | 50.0% | |
| ATAGATGTGAGGCGAGGCAT+AGG | - | chr5_1:60865344-60865363 | None:intergenic | 50.0% | |
| GAACCACATGCTTCACACGT+TGG | + | chr5_1:60865495-60865514 | Msa0741280:intron | 50.0% | |
| CTTCCAACGTGTGAAGCATG+TGG | - | chr5_1:60865501-60865520 | None:intergenic | 50.0% | |
| CACTAATCACTTGATGGGGC+AGG | + | chr5_1:60865826-60865845 | Msa0741280:intron | 50.0% | |
| TCGGCTCAGGAGATGAAAAG+AGG | + | chr5_1:60866022-60866041 | Msa0741280:intron | 50.0% | |
| AAGTTACCCACGCATAGCTG+CGG | - | chr5_1:60867205-60867224 | None:intergenic | 50.0% | |
| !! | TTTGGAGTGTCGTTGCTTCC+GGG | - | chr5_1:60867766-60867785 | None:intergenic | 50.0% |
| AACCTTCAACTCCGAAGCAG+AGG | + | chr5_1:60867785-60867804 | Msa0741280:CDS | 50.0% | |
| TTCCTCTGCTTCGGAGTTGA+AGG | - | chr5_1:60867790-60867809 | None:intergenic | 50.0% | |
| AACCTTCAACTCCGAAGCAG+AGG | + | chr5_1:60867785-60867804 | Msa0741280:CDS | 50.0% | |
| TTCCTCTGCTTCGGAGTTGA+AGG | - | chr5_1:60867790-60867809 | None:intergenic | 50.0% | |
| ATCTCTGGCCCTTTGCAAAC+GGG | - | chr5_1:60868194-60868213 | None:intergenic | 50.0% | |
| GATCTCTGGCCCTTTGCAAA+CGG | - | chr5_1:60868195-60868214 | None:intergenic | 50.0% | |
| GCGTGCACTGAAGGGATTTA+TGG | + | chr5_1:60869754-60869773 | Msa0741280:intron | 50.0% | |
| CTTTCATGTTCGGGTGATGC+GGG | - | chr5_1:60871225-60871244 | None:intergenic | 50.0% | |
| GCTTTCATGTTCGGGTGATG+CGG | - | chr5_1:60871226-60871245 | None:intergenic | 50.0% | |
| TCATCATGCCTGCCGATGTA+TGG | + | chr5_1:60871345-60871364 | Msa0741280:CDS | 50.0% | |
| GAAGAGGGTGATTATCCGTG+AGG | - | chr5_1:60872310-60872329 | None:intergenic | 50.0% | |
| CACCTACCTCAGCTAGAAGA+GGG | - | chr5_1:60872325-60872344 | None:intergenic | 50.0% | |
| ACACCTACCTCAGCTAGAAG+AGG | - | chr5_1:60872326-60872345 | None:intergenic | 50.0% | |
| GGATCATCATGTTCTCGTGG+AGG | - | chr5_1:60872431-60872450 | None:intergenic | 50.0% | |
| ! | CTTCTGGTTGTATGGCTACC+AGG | + | chr5_1:60872461-60872480 | Msa0741280:CDS | 50.0% |
| TTCGCCCGAGCTTTCTAGAT+CGG | - | chr5_1:60872687-60872706 | None:intergenic | 50.0% | |
| ! | AACGGGCTCTCATTGCAGTT+CGG | - | chr5_1:60872871-60872890 | None:intergenic | 50.0% |
| GGGACATCATCAATGACGAG+AGG | + | chr5_1:60873109-60873128 | Msa0741280:CDS | 50.0% | |
| !! | AGCCTTGTTTGCGAGTTTGG+AGG | + | chr5_1:60873779-60873798 | Msa0741280:intron | 50.0% |
| !! | GCCTTGTTTGCGAGTTTGGA+GGG | + | chr5_1:60873780-60873799 | Msa0741280:intron | 50.0% |
| ! | CCTTGTTTGCGAGTTTGGAG+GGG | + | chr5_1:60873781-60873800 | Msa0741280:intron | 50.0% |
| GCAACACAACGGACAGACTT+AGG | + | chr5_1:60874462-60874481 | Msa0741280:CDS | 50.0% | |
| TCAGGCATAGATGTGAGGCG+AGG | - | chr5_1:60865350-60865369 | None:intergenic | 55.0% | |
| TACACCCAGGGAGAATTCGG+AGG | + | chr5_1:60865998-60866017 | Msa0741280:intron | 55.0% | |
| GCAGACAGCTCAAACGAGCT+GGG | - | chr5_1:60866512-60866531 | None:intergenic | 55.0% | |
| TGCAGACAGCTCAAACGAGC+TGG | - | chr5_1:60866513-60866532 | None:intergenic | 55.0% | |
| ATACTCACCGCAGCTATGCG+TGG | + | chr5_1:60867195-60867214 | Msa0741280:intron | 55.0% | |
| TACTCACCGCAGCTATGCGT+GGG | + | chr5_1:60867196-60867215 | Msa0741280:intron | 55.0% | |
| ACTCTTGCCCCCGTTTGCAA+AGG | + | chr5_1:60868182-60868201 | Msa0741280:CDS | 55.0% | |
| CTCTTGCCCCCGTTTGCAAA+GGG | + | chr5_1:60868183-60868202 | Msa0741280:CDS | 55.0% | |
| TCTCTGGCCCTTTGCAAACG+GGG | - | chr5_1:60868193-60868212 | None:intergenic | 55.0% | |
| GCTATGCTCTGTTCGACTGG+TGG | + | chr5_1:60868779-60868798 | Msa0741280:intron | 55.0% | |
| ATGCTCTGTTCGACTGGTGG+TGG | + | chr5_1:60868782-60868801 | Msa0741280:intron | 55.0% | |
| ! | CACCCTCTTCTAGCTGAGGT+AGG | + | chr5_1:60872320-60872339 | Msa0741280:intron | 55.0% |
| GCTCTCATTGCAGTTCGGAC+TGG | - | chr5_1:60872866-60872885 | None:intergenic | 55.0% | |
| CCCCTCCAAACTCGCAAACA+AGG | - | chr5_1:60873784-60873803 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr5_1:60873785-60873804 | Msa0741280:intron | 55.0% | |
| CGAGTTTGGAGGGGAAGGAA+GGG | + | chr5_1:60873790-60873809 | Msa0741280:intron | 55.0% | |
| GAGTTTGGAGGGGAAGGAAG+GGG | + | chr5_1:60873791-60873810 | Msa0741280:intron | 55.0% | |
| ! | GAAGGGAAGAGAGGCTTTGG+GGG | - | chr5_1:60874115-60874134 | None:intergenic | 55.0% |
| GGAAGGGAAGAGAGGCTTTG+GGG | - | chr5_1:60874116-60874135 | None:intergenic | 55.0% | |
| GGGAAGGGAAGAGAGGCTTT+GGG | - | chr5_1:60874117-60874136 | None:intergenic | 55.0% | |
| AGGGAAGGGAAGAGAGGCTT+TGG | - | chr5_1:60874118-60874137 | None:intergenic | 55.0% | |
| TGTGAGGCGAGGCATAGGGA+GGG | - | chr5_1:60865339-60865358 | None:intergenic | 60.0% | |
| ATGTGAGGCGAGGCATAGGG+AGG | - | chr5_1:60865340-60865359 | None:intergenic | 60.0% | |
| CGAGCCTCCGAATTCTCCCT+GGG | - | chr5_1:60866005-60866024 | None:intergenic | 60.0% | |
| CCAGGGAGAATTCGGAGGCT+CGG | + | chr5_1:60866003-60866022 | Msa0741280:intron | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+AGG | + | chr5_1:60866009-60866028 | Msa0741280:intron | 60.0% | |
| TTGAGGCCCATCCTTGAGGG+AGG | + | chr5_1:60866486-60866505 | Msa0741280:intron | 60.0% | |
| !! | TATTCAGGGGCGTCCCTGAG+GGG | - | chr5_1:60866537-60866556 | None:intergenic | 60.0% |
| !! | GTATTCAGGGGCGTCCCTGA+GGG | - | chr5_1:60866538-60866557 | None:intergenic | 60.0% |
| !! | TGTATTCAGGGGCGTCCCTG+AGG | - | chr5_1:60866539-60866558 | None:intergenic | 60.0% |
| ! | GAGTGTCGTTGCTTCCGGGA+TGG | - | chr5_1:60867762-60867781 | None:intergenic | 60.0% |
| CTCTGGCCCTTTGCAAACGG+GGG | - | chr5_1:60868192-60868211 | None:intergenic | 60.0% | |
| GCGAGTTTGGAGGGGAAGGA+AGG | + | chr5_1:60873789-60873808 | Msa0741280:intron | 60.0% | |
| TTTGGAGGGGAAGGAAGGGG+TGG | + | chr5_1:60873794-60873813 | Msa0741280:intron | 60.0% | |
| TTGGAGGGGAAGGAAGGGGT+GGG | + | chr5_1:60873795-60873814 | Msa0741280:intron | 60.0% | |
| CCGAGCCTCCGAATTCTCCC+TGG | - | chr5_1:60866006-60866025 | None:intergenic | 65.0% | |
| GCTGGGCCTCCCTCAAGGAT+GGG | - | chr5_1:60866495-60866514 | None:intergenic | 65.0% | |
| AGCTGGGCCTCCCTCAAGGA+TGG | - | chr5_1:60866496-60866515 | None:intergenic | 65.0% | |
| AACGAGCTGGGCCTCCCTCA+AGG | - | chr5_1:60866500-60866519 | None:intergenic | 65.0% | |
| TGAGCTGTCTGCACCCCCTC+AGG | + | chr5_1:60866520-60866539 | Msa0741280:intron | 65.0% | |
| GAGCTGTCTGCACCCCCTCA+GGG | + | chr5_1:60866521-60866540 | Msa0741280:intron | 65.0% | |
| !! | ATTCAGGGGCGTCCCTGAGG+GGG | - | chr5_1:60866536-60866555 | None:intergenic | 65.0% |
| !! | GGGAAGAGAGGCTTTGGGGG+TGG | - | chr5_1:60874112-60874131 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 60865262 | 60874505 | 60865262 | ID=Msa0741280;Name=Msa0741280 |
| chr5_1 | mRNA | 60865262 | 60874505 | 60865262 | ID=Msa0741280-mRNA-1;Parent=Msa0741280;Name=Msa0741280-mRNA-1;_AED=0.12;_eAED=0.14;_QI=0|0.29|0.16|0.94|1|1|18|0|987 |
| chr5_1 | exon | 60865262 | 60865325 | 60865262 | ID=Msa0741280-mRNA-1:exon:17595;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60867638 | 60868573 | 60867638 | ID=Msa0741280-mRNA-1:exon:17596;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60869030 | 60869120 | 60869030 | ID=Msa0741280-mRNA-1:exon:17597;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60869196 | 60869664 | 60869196 | ID=Msa0741280-mRNA-1:exon:17598;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60869755 | 60869834 | 60869755 | ID=Msa0741280-mRNA-1:exon:17599;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60869952 | 60870036 | 60869952 | ID=Msa0741280-mRNA-1:exon:17600;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60870143 | 60870234 | 60870143 | ID=Msa0741280-mRNA-1:exon:17601;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60870332 | 60870400 | 60870332 | ID=Msa0741280-mRNA-1:exon:17602;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60870482 | 60870518 | 60870482 | ID=Msa0741280-mRNA-1:exon:17603;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60870596 | 60870678 | 60870596 | ID=Msa0741280-mRNA-1:exon:17604;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60871056 | 60871496 | 60871056 | ID=Msa0741280-mRNA-1:exon:17605;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60872301 | 60872337 | 60872301 | ID=Msa0741280-mRNA-1:exon:17606;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60872425 | 60872482 | 60872425 | ID=Msa0741280-mRNA-1:exon:17607;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60872684 | 60872772 | 60872684 | ID=Msa0741280-mRNA-1:exon:17608;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60872860 | 60872925 | 60872860 | ID=Msa0741280-mRNA-1:exon:17609;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60873016 | 60873130 | 60873016 | ID=Msa0741280-mRNA-1:exon:17610;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60874271 | 60874309 | 60874271 | ID=Msa0741280-mRNA-1:exon:17611;Parent=Msa0741280-mRNA-1 |
| chr5_1 | exon | 60874393 | 60874505 | 60874393 | ID=Msa0741280-mRNA-1:exon:17612;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60865262 | 60865325 | 60865262 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60867638 | 60868573 | 60867638 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60869030 | 60869120 | 60869030 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60869196 | 60869664 | 60869196 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60869755 | 60869834 | 60869755 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60869952 | 60870036 | 60869952 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60870143 | 60870234 | 60870143 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60870332 | 60870400 | 60870332 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60870482 | 60870518 | 60870482 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60870596 | 60870678 | 60870596 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60871056 | 60871496 | 60871056 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60872301 | 60872337 | 60872301 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60872425 | 60872482 | 60872425 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60872684 | 60872772 | 60872684 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60872860 | 60872925 | 60872860 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60873016 | 60873130 | 60873016 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60874271 | 60874309 | 60874271 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| chr5_1 | CDS | 60874393 | 60874505 | 60874393 | ID=Msa0741280-mRNA-1:cds;Parent=Msa0741280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
