AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257960 MtrunA17_Chr4g0056691 97.326 561 14 1 1 560 1 561 0.0 1129
Msa1257960 MtrunA17_Chr6g0462891 57.279 419 172 4 101 518 156 568 2.15e-169 494
Msa1257960 MtrunA17_Chr6g0462881 53.030 462 204 5 101 555 146 601 2.34e-167 488
Msa1257960 MtrunA17_Chr4g0024991 43.949 314 163 7 188 491 51 361 1.96e-66 220
Msa1257960 MtrunA17_Chr3g0142181 42.249 329 177 6 188 507 53 377 1.17e-63 213
Msa1257960 MtrunA17_Chr4g0075171 37.231 325 194 5 176 491 33 356 1.66e-56 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257960 AT1G12480.1 69.455 550 157 7 1 542 1 547 0.0 735
Msa1257960 AT5G24030.1 48.807 461 220 5 105 556 182 635 2.45e-153 454
Msa1257960 AT4G27970.1 46.457 508 232 10 53 553 15 489 5.04e-146 431
Msa1257960 AT4G27970.6 46.457 508 232 10 53 553 15 489 5.04e-146 431
Msa1257960 AT5G24030.2 52.853 333 149 3 105 436 182 507 6.90e-121 366
Msa1257960 AT4G27970.3 51.381 362 154 4 192 553 1 340 1.22e-120 360
Msa1257960 AT4G27970.5 51.381 362 154 4 192 553 1 340 1.22e-120 360
Msa1257960 AT4G27970.4 48.556 381 178 6 53 427 15 383 1.92e-116 350
Msa1257960 AT4G27970.2 48.556 381 178 6 53 427 15 383 1.92e-116 350
Msa1257960 AT1G62280.1 39.863 291 168 5 188 472 44 333 1.23e-69 229
Msa1257960 AT1G62262.1 39.677 310 168 5 188 491 44 340 7.73e-69 226

Find 149 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATATGGCCAGTGGCTTTC+TGG 0.152773 8_2:+59025760 Msa1257960:CDS
ATCTTTGTTCTCTGAATTCT+TGG 0.193283 8_2:-59026572 None:intergenic
CTCTTCTGCATGCCTTCTAT+TGG 0.231596 8_2:+59026434 Msa1257960:CDS
AAGAACCTGCTAAGTTCTTT+TGG 0.232128 8_2:+59025881 Msa1257960:CDS
GGCAATGAAGTAGCAATTTC+TGG 0.234340 8_2:-59026073 None:intergenic
ATAATTAAGCTGGCTCAATT+TGG 0.235609 8_2:-59023941 None:intergenic
CTTCTTGAACTCAAAATATA+TGG 0.237976 8_2:+59025745 Msa1257960:CDS
CGGTTTCCTATCGGATGTTT+TGG 0.244309 8_2:+59025391 Msa1257960:CDS
TGCATTTATGTCATCAACTA+TGG 0.263784 8_2:+59026390 Msa1257960:CDS
TTGAGTTCAAGAAGAAAATA+TGG 0.276001 8_2:-59025736 None:intergenic
TCTGTATCTGGTAACTTTGT+TGG 0.292973 8_2:+59025829 Msa1257960:CDS
TCTAACCATCTTTCTGTATC+TGG 0.299392 8_2:+59025817 Msa1257960:CDS
ATTGTCTGTTAATACTTCTA+TGG 0.315205 8_2:-59024156 None:intergenic
CAACTTCTTCTTTGCCCCTT+GGG 0.318312 8_2:+59025624 Msa1257960:CDS
TTATGTCATAGGCCTTCTTC+AGG 0.319730 8_2:-59026525 None:intergenic
GTTTCTCGAGCTCTCGTTGT+TGG 0.325267 8_2:-59024124 None:intergenic
TAGAATAGTAATGGCAATAT+TGG 0.329800 8_2:-59026670 None:intergenic
TTGCCATTACTATTCTAGTC+TGG 0.331001 8_2:+59026676 Msa1257960:three_prime_UTR
ATTGCTTGGCAGAGTATCTA+TGG 0.341867 8_2:+59026033 Msa1257960:CDS
ATAGCAATAGCAAGATCATT+TGG 0.352332 8_2:-59026469 None:intergenic
CCAGCTTAGGAGGGGCAAAT+AGG 0.352435 8_2:+59024260 Msa1257960:CDS
TTGGAGTCTCAGAAGATTAA+TGG 0.354082 8_2:+59024382 Msa1257960:CDS
TGTCCAACGCTTTATGTCAT+AGG 0.357125 8_2:-59026536 None:intergenic
GTATGTCCATAAAATGAGTT+TGG 0.360089 8_2:-59024024 None:intergenic
AAAAGTGGCCCTTTCTCCTT+CGG 0.363919 8_2:+59025371 Msa1257960:CDS
TCAACTTCTTCTTTGCCCCT+TGG 0.380335 8_2:+59025623 Msa1257960:CDS
GCAGGGTGAAGGGTTTGTTT+TGG 0.383255 8_2:-59025691 None:intergenic
AGGGGCAAATAGGTTTGGTT+TGG 0.395826 8_2:+59024270 Msa1257960:CDS
AGATACTTTGCTGCTCTTAG+AGG 0.398399 8_2:+59024451 Msa1257960:CDS
AAAGATAATAGTAAGAATAA+TGG 0.401905 8_2:+59026589 Msa1257960:CDS
TTAGGCAATGCCTCACTTGT+TGG 0.406256 8_2:-59025958 None:intergenic
CGTCCCTTCTTCGTCTCCTT+CGG 0.406854 8_2:-59024062 None:intergenic
TACACAGGATGCAATTCTTT+AGG 0.410807 8_2:-59025976 None:intergenic
TTGTGGCAGGGCTTGTTGCC+AGG 0.411906 8_2:-59025456 None:intergenic
AAACCCTTCACCCTGCCATT+TGG 0.412401 8_2:+59025698 Msa1257960:CDS
ACAAGAAGTGGAACCAGCTT+AGG 0.416763 8_2:+59024247 Msa1257960:CDS
TCTACATTTCCCTTGTCGTC+CGG 0.420486 8_2:+59026103 Msa1257960:CDS
CTTCTGCGGCTTGTATTGCT+TGG 0.429704 8_2:+59026019 Msa1257960:CDS
TTAGGAGGGGCAAATAGGTT+TGG 0.431758 8_2:+59024265 Msa1257960:CDS
AGGCAAACGACGTCTGTCTA+AGG 0.434372 8_2:+59025783 Msa1257960:CDS
TAGCAATAGCAAGATCATTT+GGG 0.435954 8_2:-59026468 None:intergenic
GAACAAAGTGCGCCAATAGA+AGG 0.436176 8_2:-59026446 None:intergenic
TGAGTTTGGAAAGAATTAGT+AGG 0.438354 8_2:-59024010 None:intergenic
AAAAGGTAAAGATGAGAGAA+AGG 0.438653 8_2:+59024219 Msa1257960:CDS
AAGAAGAAGTTGATTCGAAC+TGG 0.442195 8_2:-59025613 None:intergenic
TTTCTCCTTCGGTTTCCTAT+CGG 0.455467 8_2:+59025382 Msa1257960:CDS
CCTATTTGCCCCTCCTAAGC+TGG 0.455968 8_2:-59024260 None:intergenic
AACTCCTTCTCTACTTTCCT+CGG 0.459619 8_2:-59024361 None:intergenic
TGCCATTACTATTCTAGTCT+GGG 0.459645 8_2:+59026677 Msa1257960:three_prime_UTR
AGATACAGAAAGATGGTTAG+AGG 0.459783 8_2:-59025815 None:intergenic
AGTATCTATGGAGAGTTTGA+TGG 0.468765 8_2:+59026045 Msa1257960:CDS
AAGGTTTCTCCATGTTTCTC+CGG 0.469656 8_2:+59025477 Msa1257960:CDS
GTCCGGATCAAATTCTTCAC+TGG 0.473943 8_2:+59026120 Msa1257960:CDS
ATGAAAGTGCACCAAATGGC+AGG 0.479531 8_2:-59025709 None:intergenic
TAATAGCAGTGTCATGGCCT+AGG 0.484926 8_2:+59026630 Msa1257960:CDS
TTCTAGCTTCAAAAGTGGGT+TGG 0.487202 8_2:+59025857 Msa1257960:CDS
ACATGGAGAAACCTTGTGGC+AGG 0.489481 8_2:-59025469 None:intergenic
CCGTGTCAGTGGCAACGATC+AGG 0.489887 8_2:+59026317 Msa1257960:CDS
AGCAATTCTAGCTTCAAAAG+TGG 0.493707 8_2:+59025852 Msa1257960:CDS
ATAACTAAGGGTCTTGCTCT+TGG 0.494461 8_2:+59026364 Msa1257960:CDS
GATAGGAAACCGAAGGAGAA+AGG 0.496633 8_2:-59025380 None:intergenic
GCAAATAGGTTTGGTTTGGA+AGG 0.497212 8_2:+59024274 Msa1257960:CDS
AGCGGTTCTGTGGCTTAACC+TGG 0.503667 8_2:+59025438 Msa1257960:CDS
AACCAGTGAAGAATTTGATC+CGG 0.506305 8_2:-59026122 None:intergenic
TATGTCATAGGCCTTCTTCA+GGG 0.506836 8_2:-59026524 None:intergenic
AGACCCTTAGTTATGTAGGC+AGG 0.515905 8_2:-59026355 None:intergenic
AGAAGTGGAACCAGCTTAGG+AGG 0.520012 8_2:+59024250 Msa1257960:CDS
GCAATTCTAGCTTCAAAAGT+GGG 0.523003 8_2:+59025853 Msa1257960:CDS
GCTTAGCAAAATAATTAAGC+TGG 0.524144 8_2:-59023951 None:intergenic
AGCAAGACCCTTAGTTATGT+AGG 0.525942 8_2:-59026359 None:intergenic
TGCACCAAATGGCAGGGTGA+AGG 0.528166 8_2:-59025702 None:intergenic
AGTATTGTGCTACTCATCCT+AGG 0.528655 8_2:-59026647 None:intergenic
TATCCGAAGGAGACGAAGAA+GGG 0.529235 8_2:+59024059 Msa1257960:CDS
GCACCAAATGGCAGGGTGAA+GGG 0.530402 8_2:-59025701 None:intergenic
GGTCCCTGCCTACATAACTA+AGG 0.530961 8_2:+59026351 Msa1257960:CDS
TTATCCGAAGGAGACGAAGA+AGG 0.533864 8_2:+59024058 Msa1257960:CDS
ACAGCCCAAAAGAACTTAGC+AGG 0.540870 8_2:-59025886 None:intergenic
ATAGGAAACCGAAGGAGAAA+GGG 0.541950 8_2:-59025379 None:intergenic
TACTATGAAAGTGCACCAAA+TGG 0.542959 8_2:-59025713 None:intergenic
GCTATAACGAAGAGGAAGAA+AGG 0.545782 8_2:+59026487 Msa1257960:CDS
TTCTCCCTACCGATGAAAAG+TGG 0.545837 8_2:+59025356 Msa1257960:CDS
TCTCAGAAGATTAATGGTGC+TGG 0.546334 8_2:+59024388 Msa1257960:CDS
GCCACTGACACGGTTGTCAT+CGG 0.548925 8_2:-59026307 None:intergenic
AGAAGTTGATTCGAACTGGA+TGG 0.549353 8_2:-59025609 None:intergenic
ACATTTGATACAGGACTATG+AGG 0.550649 8_2:+59025327 Msa1257960:intron
AACTGCTATTAGCACTGCTA+AGG 0.550771 8_2:-59025527 None:intergenic
GTTCTCAACAGAGAAAGAAA+AGG 0.550811 8_2:+59024202 Msa1257960:CDS
ATGTCATAGGCCTTCTTCAG+GGG 0.550868 8_2:-59026523 None:intergenic
GTTAATGCAAGTGTTCCTGC+TGG 0.556711 8_2:+59024427 Msa1257960:CDS
GCAGCAAAGTATCTACCAGC+AGG 0.560339 8_2:-59024442 None:intergenic
GAATATGCATTTGAGAATGT+AGG 0.560627 8_2:-59025557 None:intergenic
GAGGAAAGTAGAGAAGGAGT+TGG 0.561770 8_2:+59024363 Msa1257960:CDS
AGAATTTGATCCGGACGACA+AGG 0.563249 8_2:-59026113 None:intergenic
GTATCTATGGAGAGTTTGAT+GGG 0.563934 8_2:+59026046 Msa1257960:CDS
ACCTGAGTTAGATGAAGTCA+AGG 0.566073 8_2:+59024474 Msa1257960:CDS
GTTTGCCTCCAGAAAGCCAC+TGG 0.566123 8_2:-59025768 None:intergenic
ATCCCAGACTAGAATAGTAA+TGG 0.567690 8_2:-59026679 None:intergenic
AGCAGAATTCTTTGTTGCCG+AGG 0.570215 8_2:+59024344 Msa1257960:CDS
TGACACTGCTATTATCGCAT+TGG 0.573678 8_2:-59026621 None:intergenic
AATACAAGCCGCAGAAGGAG+CGG 0.575570 8_2:-59026013 None:intergenic
CAAGCAATACAAGCCGCAGA+AGG 0.576215 8_2:-59026018 None:intergenic
TAACGAAGAGGAAGAAAGGT+GGG 0.579532 8_2:+59026491 Msa1257960:CDS
GGAGAAGAAACCCCTGAAGA+AGG 0.580629 8_2:+59026513 Msa1257960:CDS
TCCGATGACAACCGTGTCAG+TGG 0.581671 8_2:+59026306 Msa1257960:CDS
TTCTAGTCTGGGATCAGCCG+TGG 0.582412 8_2:+59026688 Msa1257960:three_prime_UTR
AACGATCAGGTATGCAGAGG+CGG 0.584532 8_2:+59026330 Msa1257960:CDS
TAAGCAGCCAAGCGGTTCTG+TGG 0.586235 8_2:+59025428 Msa1257960:CDS
GATACAGAAAGATGGTTAGA+GGG 0.587581 8_2:-59025814 None:intergenic
GGTTAAGCCACAGAACCGCT+TGG 0.587725 8_2:-59025435 None:intergenic
GTTGCCGAGGAAAGTAGAGA+AGG 0.589628 8_2:+59024357 Msa1257960:CDS
GAAGATTAATGGTGCTGGTG+TGG 0.591990 8_2:+59024393 Msa1257960:CDS
AACTTATATCCGGAGAAACA+TGG 0.594407 8_2:-59025486 None:intergenic
GACCCTTAGTTATGTAGGCA+GGG 0.595065 8_2:-59026354 None:intergenic
GAAGTGGAACCAGCTTAGGA+GGG 0.599091 8_2:+59024251 Msa1257960:CDS
AGTTACCAGATACAGAAAGA+TGG 0.605209 8_2:-59025822 None:intergenic
AGAAGGAGCGGCAATAAACA+TGG 0.605752 8_2:-59026001 None:intergenic
ATGCGATAATAGCAGTGTCA+TGG 0.608757 8_2:+59026624 Msa1257960:CDS
GTTTATTGCCGCTCCTTCTG+CGG 0.609540 8_2:+59026005 Msa1257960:CDS
CCTGATCGTTGCCACTGACA+CGG 0.609620 8_2:-59026317 None:intergenic
CTCAAGATAATATAAAGCCA+CGG 0.613530 8_2:-59026705 None:intergenic
ATAGAAGGCATGCAGAAGAG+TGG 0.613902 8_2:-59026431 None:intergenic
ACCTTGACTTCATCTAACTC+AGG 0.616118 8_2:-59024475 None:intergenic
AACTCAAAATATATGGCCAG+TGG 0.618958 8_2:+59025752 Msa1257960:CDS
GAATTTGATCCGGACGACAA+GGG 0.623042 8_2:-59026112 None:intergenic
TTGCTATTGCTATAACGAAG+AGG 0.625499 8_2:+59026479 Msa1257960:CDS
CAGATACCAAAACATCCGAT+AGG 0.625516 8_2:-59025397 None:intergenic
TGGCAACAAGCCCTGCCACA+AGG 0.626584 8_2:+59025458 Msa1257960:CDS
TATTCTGGAGGGTACAGAGA+TGG 0.626926 8_2:-59025665 None:intergenic
AGGCCTATGACATAAAGCGT+TGG 0.628157 8_2:+59026533 Msa1257960:CDS
GTCCCTGCCTACATAACTAA+GGG 0.630274 8_2:+59026352 Msa1257960:CDS
CATGGAGAAACCTTGTGGCA+GGG 0.642484 8_2:-59025468 None:intergenic
TGGCTTTGCACATTACCTTG+TGG 0.643611 8_2:+59025909 Msa1257960:CDS
TGAAAGTGCACCAAATGGCA+GGG 0.645337 8_2:-59025708 None:intergenic
AACGAAGAGGAAGAAAGGTG+GGG 0.649385 8_2:+59026492 Msa1257960:CDS
AACATCCGATAGGAAACCGA+AGG 0.651583 8_2:-59025387 None:intergenic
TATGGCCAGTGGCTTTCTGG+AGG 0.651720 8_2:+59025763 Msa1257960:CDS
AAAACATGCATACAACCCAA+GGG 0.655414 8_2:-59025639 None:intergenic
GGCAACGATCAGGTATGCAG+AGG 0.658848 8_2:+59026327 Msa1257960:CDS
TCAGAGATTACCAACAAGTG+AGG 0.667013 8_2:+59025948 Msa1257960:CDS
GCAATAAACATGGAGTACAC+AGG 0.680934 8_2:-59025991 None:intergenic
AAGTGGAACCAGCTTAGGAG+GGG 0.682019 8_2:+59024252 Msa1257960:CDS
TAGTTGATGACATAAATGCA+AGG 0.687210 8_2:-59026387 None:intergenic
TGACACGGTTGTCATCGGAA+AGG 0.690469 8_2:-59026302 None:intergenic
AAGGGAAATGTAGAGAAACA+AGG 0.693364 8_2:-59026094 None:intergenic
ATAACGAAGAGGAAGAAAGG+TGG 0.695504 8_2:+59026490 Msa1257960:CDS
AGAAACATGGAGAAACCTTG+TGG 0.707078 8_2:-59025473 None:intergenic
AAACATGCATACAACCCAAG+GGG 0.716501 8_2:-59025638 None:intergenic
ACAATGTAACAAATACCACA+AGG 0.740335 8_2:-59025924 None:intergenic
TCTAGGACTAAGCAGCCAAG+CGG 0.748005 8_2:+59025420 Msa1257960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTAGTTTTAATAAATAGT+TGG - chr8_2:59023919-59023938 None:intergenic 15.0%
!!! AATTTAGCTTCTAAAATTAT+AGG - chr8_2:59024697-59024716 None:intergenic 15.0%
!! ACAATTCATTGATATAAATT+TGG + chr8_2:59024856-59024875 Msa1257960:intron 15.0%
!! CAATTCATTGATATAAATTT+GGG + chr8_2:59024857-59024876 Msa1257960:intron 15.0%
!! AATTCATTGATATAAATTTG+GGG + chr8_2:59024858-59024877 Msa1257960:intron 15.0%
!! CATATTAAAAAACTTATATC+CGG - chr8_2:59025499-59025518 None:intergenic 15.0%
!! AAAGATAATAGTAAGAATAA+TGG + chr8_2:59026589-59026608 Msa1257960:CDS 15.0%
!!! TTAATTATTTTGCTAAGCAT+AGG + chr8_2:59023956-59023975 Msa1257960:five_prime_UTR 20.0%
!! TTATAGCCAGAAAAAAAAAA+TGG + chr8_2:59023979-59023998 Msa1257960:exon 20.0%
!!! ACACACGTTTATATTTTTTT+TGG - chr8_2:59025078-59025097 None:intergenic 20.0%
!!! CGGATATAAGTTTTTTAATA+TGG + chr8_2:59025497-59025516 Msa1257960:CDS 20.0%
!!! AATTTCAACAATCTAGATTT+TGG + chr8_2:59026190-59026209 Msa1257960:intron 20.0%
!!! ATTTCAACAATCTAGATTTT+GGG + chr8_2:59026191-59026210 Msa1257960:intron 20.0%
!!! CTATGTATTTTTTAATTGAC+AGG + chr8_2:59026254-59026273 Msa1257960:intron 20.0%
!!! TCTTGTCCATTTTTTTTTTC+TGG - chr8_2:59023988-59024007 None:intergenic 25.0%
!! TTCTTTCCAAACTCATTTTA+TGG + chr8_2:59024018-59024037 Msa1257960:CDS 25.0%
! ATTGTCTGTTAATACTTCTA+TGG - chr8_2:59024159-59024178 None:intergenic 25.0%
!!! ATCTCTTTAGAGTTAATTTC+AGG - chr8_2:59024599-59024618 None:intergenic 25.0%
! TCTAAAGAGATTAACATGAT+CGG + chr8_2:59024608-59024627 Msa1257960:intron 25.0%
! GTATGAAAAACATTTAGAAG+AGG + chr8_2:59024977-59024996 Msa1257960:intron 25.0%
!!! ATATTTTTTTTGGCAAACCA+AGG - chr8_2:59025068-59025087 None:intergenic 25.0%
!! CATATTTAAGGATTTTGTCT+CGG - chr8_2:59025156-59025175 None:intergenic 25.0%
! ACAAAATCCTTAAATATGCT+TGG + chr8_2:59025158-59025177 Msa1257960:intron 25.0%
! TTGAGTTCAAGAAGAAAATA+TGG - chr8_2:59025739-59025758 None:intergenic 25.0%
! CTTCTTGAACTCAAAATATA+TGG + chr8_2:59025745-59025764 Msa1257960:CDS 25.0%
!!! CAAAGTTGAATGTATTTTGA+TGG - chr8_2:59026166-59026185 None:intergenic 25.0%
! CATCAAAATACATTCAACTT+TGG + chr8_2:59026164-59026183 Msa1257960:intron 25.0%
! TAGAATAGTAATGGCAATAT+TGG - chr8_2:59026673-59026692 None:intergenic 25.0%
! ATAATTAAGCTGGCTCAATT+TGG - chr8_2:59023944-59023963 None:intergenic 30.0%
GCTTAGCAAAATAATTAAGC+TGG - chr8_2:59023954-59023973 None:intergenic 30.0%
TGAGTTTGGAAAGAATTAGT+AGG - chr8_2:59024013-59024032 None:intergenic 30.0%
GTATGTCCATAAAATGAGTT+TGG - chr8_2:59024027-59024046 None:intergenic 30.0%
AAAAGGTAAAGATGAGAGAA+AGG + chr8_2:59024219-59024238 Msa1257960:CDS 30.0%
TTCACAAGGTTATAGGAAAA+TGG - chr8_2:59024764-59024783 None:intergenic 30.0%
TACAACTTTCACAAGGTTAT+AGG - chr8_2:59024771-59024790 None:intergenic 30.0%
! CATTGATTACAACTTTCACA+AGG - chr8_2:59024778-59024797 None:intergenic 30.0%
! ATAAATTTGGGGCTAAAAAC+AGG + chr8_2:59024869-59024888 Msa1257960:intron 30.0%
AGCACAAGTAATAGATACTT+CGG + chr8_2:59024916-59024935 Msa1257960:intron 30.0%
ACTTAGACCAAGCATATTTA+AGG - chr8_2:59025168-59025187 None:intergenic 30.0%
GAATATGCATTTGAGAATGT+AGG - chr8_2:59025560-59025579 None:intergenic 30.0%
ACAATGTAACAAATACCACA+AGG - chr8_2:59025927-59025946 None:intergenic 30.0%
!!! TCAAATTCTTCACTGGTTTT+AGG + chr8_2:59026127-59026146 Msa1257960:CDS 30.0%
AACAGAGTTTACATGATTGA+AGG + chr8_2:59026216-59026235 Msa1257960:intron 30.0%
ACAGAGTTTACATGATTGAA+GGG + chr8_2:59026217-59026236 Msa1257960:intron 30.0%
! TTTAATTGACAGGTTTTCAG+TGG + chr8_2:59026264-59026283 Msa1257960:intron 30.0%
!! TAGTTGATGACATAAATGCA+AGG - chr8_2:59026390-59026409 None:intergenic 30.0%
TGCATTTATGTCATCAACTA+TGG + chr8_2:59026390-59026409 Msa1257960:CDS 30.0%
TAGCAATAGCAAGATCATTT+GGG - chr8_2:59026471-59026490 None:intergenic 30.0%
ATAGCAATAGCAAGATCATT+TGG - chr8_2:59026472-59026491 None:intergenic 30.0%
ATCTTTGTTCTCTGAATTCT+TGG - chr8_2:59026575-59026594 None:intergenic 30.0%
CTCAAGATAATATAAAGCCA+CGG - chr8_2:59026708-59026727 None:intergenic 30.0%
!! CATGATGAAGTTTTATCCGA+AGG + chr8_2:59024046-59024065 Msa1257960:CDS 35.0%
! AGACAATTTTCACTTGAGAC+AGG + chr8_2:59024172-59024191 Msa1257960:CDS 35.0%
GTTCTCAACAGAGAAAGAAA+AGG + chr8_2:59024202-59024221 Msa1257960:CDS 35.0%
!! AGAAAGGTTTTGACAAGAAG+TGG + chr8_2:59024235-59024254 Msa1257960:CDS 35.0%
TTGGAGTCTCAGAAGATTAA+TGG + chr8_2:59024382-59024401 Msa1257960:CDS 35.0%
! TTTTTCATACGCGCTAATCA+AGG - chr8_2:59024967-59024986 None:intergenic 35.0%
TCTTAAGAACCTAGTGTACA+TGG + chr8_2:59025027-59025046 Msa1257960:intron 35.0%
!! TAGCTTGGTAGTTTTCCTTT+CGG - chr8_2:59025205-59025224 None:intergenic 35.0%
AGGAAAACTACCAAGCTAAA+AGG + chr8_2:59025207-59025226 Msa1257960:intron 35.0%
!! TGTAAGCTATCCTTTTAGCT+TGG - chr8_2:59025220-59025239 None:intergenic 35.0%
TCATACACATGCATATCTAG+TGG - chr8_2:59025289-59025308 None:intergenic 35.0%
GTTGTGCATACATTTGATAC+AGG + chr8_2:59025318-59025337 Msa1257960:intron 35.0%
ACATTTGATACAGGACTATG+AGG + chr8_2:59025327-59025346 Msa1257960:intron 35.0%
AACTTATATCCGGAGAAACA+TGG - chr8_2:59025489-59025508 None:intergenic 35.0%
!! AAGAAGAAGTTGATTCGAAC+TGG - chr8_2:59025616-59025635 None:intergenic 35.0%
AAAACATGCATACAACCCAA+GGG - chr8_2:59025642-59025661 None:intergenic 35.0%
AAAAACATGCATACAACCCA+AGG - chr8_2:59025643-59025662 None:intergenic 35.0%
!! TTGGGTTGTATGCATGTTTT+TGG + chr8_2:59025642-59025661 Msa1257960:CDS 35.0%
! TACTATGAAAGTGCACCAAA+TGG - chr8_2:59025716-59025735 None:intergenic 35.0%
AACTCAAAATATATGGCCAG+TGG + chr8_2:59025752-59025771 Msa1257960:CDS 35.0%
GATACAGAAAGATGGTTAGA+GGG - chr8_2:59025817-59025836 None:intergenic 35.0%
AGATACAGAAAGATGGTTAG+AGG - chr8_2:59025818-59025837 None:intergenic 35.0%
TCTAACCATCTTTCTGTATC+TGG + chr8_2:59025817-59025836 Msa1257960:CDS 35.0%
AGTTACCAGATACAGAAAGA+TGG - chr8_2:59025825-59025844 None:intergenic 35.0%
TCTGTATCTGGTAACTTTGT+TGG + chr8_2:59025829-59025848 Msa1257960:CDS 35.0%
!! AGCAATTCTAGCTTCAAAAG+TGG + chr8_2:59025852-59025871 Msa1257960:CDS 35.0%
!! GCAATTCTAGCTTCAAAAGT+GGG + chr8_2:59025853-59025872 Msa1257960:CDS 35.0%
! AAGAACCTGCTAAGTTCTTT+TGG + chr8_2:59025881-59025900 Msa1257960:CDS 35.0%
! AGAACCTGCTAAGTTCTTTT+GGG + chr8_2:59025882-59025901 Msa1257960:CDS 35.0%
TACACAGGATGCAATTCTTT+AGG - chr8_2:59025979-59025998 None:intergenic 35.0%
AGTATCTATGGAGAGTTTGA+TGG + chr8_2:59026045-59026064 Msa1257960:CDS 35.0%
GTATCTATGGAGAGTTTGAT+GGG + chr8_2:59026046-59026065 Msa1257960:CDS 35.0%
AAGGGAAATGTAGAGAAACA+AGG - chr8_2:59026097-59026116 None:intergenic 35.0%
AACCAGTGAAGAATTTGATC+CGG - chr8_2:59026125-59026144 None:intergenic 35.0%
CAGAGTTTACATGATTGAAG+GGG + chr8_2:59026218-59026237 Msa1257960:intron 35.0%
! TTGCTATTGCTATAACGAAG+AGG + chr8_2:59026479-59026498 Msa1257960:CDS 35.0%
TTGCCATTACTATTCTAGTC+TGG + chr8_2:59026676-59026695 Msa1257960:three_prime_UTR 35.0%
TGCCATTACTATTCTAGTCT+GGG + chr8_2:59026677-59026696 Msa1257960:three_prime_UTR 35.0%
ATCCCAGACTAGAATAGTAA+TGG - chr8_2:59026682-59026701 None:intergenic 35.0%
AGAAGGGACGATAAAAAACG+AGG + chr8_2:59024075-59024094 Msa1257960:CDS 40.0%
!! GCAAATAGGTTTGGTTTGGA+AGG + chr8_2:59024274-59024293 Msa1257960:CDS 40.0%
AACTCCTTCTCTACTTTCCT+CGG - chr8_2:59024364-59024383 None:intergenic 40.0%
TCTCAGAAGATTAATGGTGC+TGG + chr8_2:59024388-59024407 Msa1257960:CDS 40.0%
AGATACTTTGCTGCTCTTAG+AGG + chr8_2:59024451-59024470 Msa1257960:CDS 40.0%
ACCTGAGTTAGATGAAGTCA+AGG + chr8_2:59024474-59024493 Msa1257960:CDS 40.0%
ACCTTGACTTCATCTAACTC+AGG - chr8_2:59024478-59024497 None:intergenic 40.0%
TTACTTGTGCTACACGATGT+TGG - chr8_2:59024907-59024926 None:intergenic 40.0%
!! TTATTGATTCCACACCCGAA+AGG + chr8_2:59025187-59025206 Msa1257960:intron 40.0%
!! AGCTTGGTAGTTTTCCTTTC+GGG - chr8_2:59025204-59025223 None:intergenic 40.0%
TACACATGCATATCTAGTGG+TGG - chr8_2:59025286-59025305 None:intergenic 40.0%
ATAGGAAACCGAAGGAGAAA+GGG - chr8_2:59025382-59025401 None:intergenic 40.0%
TTTCTCCTTCGGTTTCCTAT+CGG + chr8_2:59025382-59025401 Msa1257960:CDS 40.0%
CAGATACCAAAACATCCGAT+AGG - chr8_2:59025400-59025419 None:intergenic 40.0%
!!! GGATGTTTTGGTATCTGTCT+AGG + chr8_2:59025403-59025422 Msa1257960:CDS 40.0%
AGAAACATGGAGAAACCTTG+TGG - chr8_2:59025476-59025495 None:intergenic 40.0%
AAGGTTTCTCCATGTTTCTC+CGG + chr8_2:59025477-59025496 Msa1257960:CDS 40.0%
AACTGCTATTAGCACTGCTA+AGG - chr8_2:59025530-59025549 None:intergenic 40.0%
!! AGAAGTTGATTCGAACTGGA+TGG - chr8_2:59025612-59025631 None:intergenic 40.0%
AAACATGCATACAACCCAAG+GGG - chr8_2:59025641-59025660 None:intergenic 40.0%
!!! TGTTTTGGGACTATTCTGGA+GGG - chr8_2:59025679-59025698 None:intergenic 40.0%
!!! TTGTTTTGGGACTATTCTGG+AGG - chr8_2:59025680-59025699 None:intergenic 40.0%
!!! GGTTTGTTTTGGGACTATTC+TGG - chr8_2:59025683-59025702 None:intergenic 40.0%
!! TTCTAGCTTCAAAAGTGGGT+TGG + chr8_2:59025857-59025876 Msa1257960:CDS 40.0%
TCAGAGATTACCAACAAGTG+AGG + chr8_2:59025948-59025967 Msa1257960:CDS 40.0%
GCAATAAACATGGAGTACAC+AGG - chr8_2:59025994-59026013 None:intergenic 40.0%
! ATTGCTTGGCAGAGTATCTA+TGG + chr8_2:59026033-59026052 Msa1257960:CDS 40.0%
GGCAATGAAGTAGCAATTTC+TGG - chr8_2:59026076-59026095 None:intergenic 40.0%
AGCAAGACCCTTAGTTATGT+AGG - chr8_2:59026362-59026381 None:intergenic 40.0%
ATAACTAAGGGTCTTGCTCT+TGG + chr8_2:59026364-59026383 Msa1257960:CDS 40.0%
GCTATAACGAAGAGGAAGAA+AGG + chr8_2:59026487-59026506 Msa1257960:CDS 40.0%
ATAACGAAGAGGAAGAAAGG+TGG + chr8_2:59026490-59026509 Msa1257960:CDS 40.0%
TAACGAAGAGGAAGAAAGGT+GGG + chr8_2:59026491-59026510 Msa1257960:CDS 40.0%
TATGTCATAGGCCTTCTTCA+GGG - chr8_2:59026527-59026546 None:intergenic 40.0%
TTATGTCATAGGCCTTCTTC+AGG - chr8_2:59026528-59026547 None:intergenic 40.0%
TGTCCAACGCTTTATGTCAT+AGG - chr8_2:59026539-59026558 None:intergenic 40.0%
TGACACTGCTATTATCGCAT+TGG - chr8_2:59026624-59026643 None:intergenic 40.0%
ATGCGATAATAGCAGTGTCA+TGG + chr8_2:59026624-59026643 Msa1257960:CDS 40.0%
! AGTATTGTGCTACTCATCCT+AGG - chr8_2:59026650-59026669 None:intergenic 40.0%
TTATCCGAAGGAGACGAAGA+AGG + chr8_2:59024058-59024077 Msa1257960:CDS 45.0%
TATCCGAAGGAGACGAAGAA+GGG + chr8_2:59024059-59024078 Msa1257960:CDS 45.0%
ACAAGAAGTGGAACCAGCTT+AGG + chr8_2:59024247-59024266 Msa1257960:CDS 45.0%
TTAGGAGGGGCAAATAGGTT+TGG + chr8_2:59024265-59024284 Msa1257960:CDS 45.0%
! AGGGGCAAATAGGTTTGGTT+TGG + chr8_2:59024270-59024289 Msa1257960:CDS 45.0%
AGCAGAATTCTTTGTTGCCG+AGG + chr8_2:59024344-59024363 Msa1257960:CDS 45.0%
GAGGAAAGTAGAGAAGGAGT+TGG + chr8_2:59024363-59024382 Msa1257960:CDS 45.0%
!! GAAGATTAATGGTGCTGGTG+TGG + chr8_2:59024393-59024412 Msa1257960:CDS 45.0%
GTTAATGCAAGTGTTCCTGC+TGG + chr8_2:59024427-59024446 Msa1257960:CDS 45.0%
ACATGCATGCATGCAAGTTG+AGG - chr8_2:59024532-59024551 None:intergenic 45.0%
! GATACTTCGGCTCGTTAATG+TGG + chr8_2:59024929-59024948 Msa1257960:intron 45.0%
! ACTTTTCATCGGTAGGGAGA+AGG - chr8_2:59025357-59025376 None:intergenic 45.0%
TTCTCCCTACCGATGAAAAG+TGG + chr8_2:59025356-59025375 Msa1257960:CDS 45.0%
!!! GAGAAAGGGCCACTTTTCAT+CGG - chr8_2:59025368-59025387 None:intergenic 45.0%
AAAAGTGGCCCTTTCTCCTT+CGG + chr8_2:59025371-59025390 Msa1257960:CDS 45.0%
GATAGGAAACCGAAGGAGAA+AGG - chr8_2:59025383-59025402 None:intergenic 45.0%
AACATCCGATAGGAAACCGA+AGG - chr8_2:59025390-59025409 None:intergenic 45.0%
! CGGTTTCCTATCGGATGTTT+TGG + chr8_2:59025391-59025410 Msa1257960:CDS 45.0%
TCAACTTCTTCTTTGCCCCT+TGG + chr8_2:59025623-59025642 Msa1257960:CDS 45.0%
CAACTTCTTCTTTGCCCCTT+GGG + chr8_2:59025624-59025643 Msa1257960:CDS 45.0%
! TATTCTGGAGGGTACAGAGA+TGG - chr8_2:59025668-59025687 None:intergenic 45.0%
!! CAGGGTGAAGGGTTTGTTTT+GGG - chr8_2:59025693-59025712 None:intergenic 45.0%
! TGAAAGTGCACCAAATGGCA+GGG - chr8_2:59025711-59025730 None:intergenic 45.0%
! ATGAAAGTGCACCAAATGGC+AGG - chr8_2:59025712-59025731 None:intergenic 45.0%
ATATATGGCCAGTGGCTTTC+TGG + chr8_2:59025760-59025779 Msa1257960:CDS 45.0%
ACAGCCCAAAAGAACTTAGC+AGG - chr8_2:59025889-59025908 None:intergenic 45.0%
! GCTAAGTTCTTTTGGGCTGT+TGG + chr8_2:59025889-59025908 Msa1257960:CDS 45.0%
! TGGCTTTGCACATTACCTTG+TGG + chr8_2:59025909-59025928 Msa1257960:CDS 45.0%
TTAGGCAATGCCTCACTTGT+TGG - chr8_2:59025961-59025980 None:intergenic 45.0%
AGAAGGAGCGGCAATAAACA+TGG - chr8_2:59026004-59026023 None:intergenic 45.0%
TCTACATTTCCCTTGTCGTC+CGG + chr8_2:59026103-59026122 Msa1257960:CDS 45.0%
GAATTTGATCCGGACGACAA+GGG - chr8_2:59026115-59026134 None:intergenic 45.0%
AGAATTTGATCCGGACGACA+AGG - chr8_2:59026116-59026135 None:intergenic 45.0%
GTCCGGATCAAATTCTTCAC+TGG + chr8_2:59026120-59026139 Msa1257960:CDS 45.0%
! ACATGATTGAAGGGGTGCAA+AGG + chr8_2:59026226-59026245 Msa1257960:intron 45.0%
GTCCCTGCCTACATAACTAA+GGG + chr8_2:59026352-59026371 Msa1257960:CDS 45.0%
GACCCTTAGTTATGTAGGCA+GGG - chr8_2:59026357-59026376 None:intergenic 45.0%
AGACCCTTAGTTATGTAGGC+AGG - chr8_2:59026358-59026377 None:intergenic 45.0%
! ATAGAAGGCATGCAGAAGAG+TGG - chr8_2:59026434-59026453 None:intergenic 45.0%
CTCTTCTGCATGCCTTCTAT+TGG + chr8_2:59026434-59026453 Msa1257960:CDS 45.0%
GAACAAAGTGCGCCAATAGA+AGG - chr8_2:59026449-59026468 None:intergenic 45.0%
AACGAAGAGGAAGAAAGGTG+GGG + chr8_2:59026492-59026511 Msa1257960:CDS 45.0%
ATGTCATAGGCCTTCTTCAG+GGG - chr8_2:59026526-59026545 None:intergenic 45.0%
AGGCCTATGACATAAAGCGT+TGG + chr8_2:59026533-59026552 Msa1257960:CDS 45.0%
TAATAGCAGTGTCATGGCCT+AGG + chr8_2:59026630-59026649 Msa1257960:CDS 45.0%
!!! TAAAAATAATTATGTTATTT+CGG - chr8_2:59024830-59024849 None:intergenic 5.0%
GTTTCTCGAGCTCTCGTTGT+TGG - chr8_2:59024127-59024146 None:intergenic 50.0%
AGAAGTGGAACCAGCTTAGG+AGG + chr8_2:59024250-59024269 Msa1257960:CDS 50.0%
GAAGTGGAACCAGCTTAGGA+GGG + chr8_2:59024251-59024270 Msa1257960:CDS 50.0%
AAGTGGAACCAGCTTAGGAG+GGG + chr8_2:59024252-59024271 Msa1257960:CDS 50.0%
GTTGCCGAGGAAAGTAGAGA+AGG + chr8_2:59024357-59024376 Msa1257960:CDS 50.0%
! GCAGCAAAGTATCTACCAGC+AGG - chr8_2:59024445-59024464 None:intergenic 50.0%
! TGCTACACGATGTTGGTGAG+TGG - chr8_2:59024900-59024919 None:intergenic 50.0%
! CTTCGGCTCGTTAATGTGGT+TGG + chr8_2:59024933-59024952 Msa1257960:intron 50.0%
CGTGCACAACCATGTACACT+AGG - chr8_2:59025039-59025058 None:intergenic 50.0%
AGTGTACATGGTTGTGCACG+AGG + chr8_2:59025039-59025058 Msa1257960:intron 50.0%
!! GGTAGTTTTCCTTTCGGGTG+TGG - chr8_2:59025199-59025218 None:intergenic 50.0%
!!! AGGGCCACTTTTCATCGGTA+GGG - chr8_2:59025363-59025382 None:intergenic 50.0%
!!! AAGGGCCACTTTTCATCGGT+AGG - chr8_2:59025364-59025383 None:intergenic 50.0%
! TCTAGGACTAAGCAGCCAAG+CGG + chr8_2:59025420-59025439 Msa1257960:CDS 50.0%
CATGGAGAAACCTTGTGGCA+GGG - chr8_2:59025471-59025490 None:intergenic 50.0%
ACATGGAGAAACCTTGTGGC+AGG - chr8_2:59025472-59025491 None:intergenic 50.0%
!! GCAGGGTGAAGGGTTTGTTT+TGG - chr8_2:59025694-59025713 None:intergenic 50.0%
AAACCCTTCACCCTGCCATT+TGG + chr8_2:59025698-59025717 Msa1257960:CDS 50.0%
AGGCAAACGACGTCTGTCTA+AGG + chr8_2:59025783-59025802 Msa1257960:CDS 50.0%
GTTTATTGCCGCTCCTTCTG+CGG + chr8_2:59026005-59026024 Msa1257960:CDS 50.0%
AATACAAGCCGCAGAAGGAG+CGG - chr8_2:59026016-59026035 None:intergenic 50.0%
CAAGCAATACAAGCCGCAGA+AGG - chr8_2:59026021-59026040 None:intergenic 50.0%
CTTCTGCGGCTTGTATTGCT+TGG + chr8_2:59026019-59026038 Msa1257960:CDS 50.0%
! TTGACAGGTTTTCAGTGGCG+TGG + chr8_2:59026269-59026288 Msa1257960:intron 50.0%
TGACACGGTTGTCATCGGAA+AGG - chr8_2:59026305-59026324 None:intergenic 50.0%
AACGATCAGGTATGCAGAGG+CGG + chr8_2:59026330-59026349 Msa1257960:CDS 50.0%
GGTCCCTGCCTACATAACTA+AGG + chr8_2:59026351-59026370 Msa1257960:CDS 50.0%
GGAGAAGAAACCCCTGAAGA+AGG + chr8_2:59026513-59026532 Msa1257960:CDS 50.0%
CGTCCCTTCTTCGTCTCCTT+CGG - chr8_2:59024065-59024084 None:intergenic 55.0%
CCTATTTGCCCCTCCTAAGC+TGG - chr8_2:59024263-59024282 None:intergenic 55.0%
CCAGCTTAGGAGGGGCAAAT+AGG + chr8_2:59024260-59024279 Msa1257960:CDS 55.0%
CGGCTCGTTAATGTGGTTGG+AGG + chr8_2:59024936-59024955 Msa1257960:intron 55.0%
GGTTGTGCACGAGGATACCT+TGG + chr8_2:59025048-59025067 Msa1257960:intron 55.0%
TAAGCAGCCAAGCGGTTCTG+TGG + chr8_2:59025428-59025447 Msa1257960:CDS 55.0%
GGTTAAGCCACAGAACCGCT+TGG - chr8_2:59025438-59025457 None:intergenic 55.0%
AGCGGTTCTGTGGCTTAACC+TGG + chr8_2:59025438-59025457 Msa1257960:CDS 55.0%
GCACCAAATGGCAGGGTGAA+GGG - chr8_2:59025704-59025723 None:intergenic 55.0%
TGCACCAAATGGCAGGGTGA+AGG - chr8_2:59025705-59025724 None:intergenic 55.0%
TATGGCCAGTGGCTTTCTGG+AGG + chr8_2:59025763-59025782 Msa1257960:CDS 55.0%
GTTTGCCTCCAGAAAGCCAC+TGG - chr8_2:59025771-59025790 None:intergenic 55.0%
! ACAGGTTTTCAGTGGCGTGG+TGG + chr8_2:59026272-59026291 Msa1257960:intron 55.0%
! CAGGTTTTCAGTGGCGTGGT+GGG + chr8_2:59026273-59026292 Msa1257960:intron 55.0%
TCCGATGACAACCGTGTCAG+TGG + chr8_2:59026306-59026325 Msa1257960:CDS 55.0%
GCCACTGACACGGTTGTCAT+CGG - chr8_2:59026310-59026329 None:intergenic 55.0%
CCTGATCGTTGCCACTGACA+CGG - chr8_2:59026320-59026339 None:intergenic 55.0%
GGCAACGATCAGGTATGCAG+AGG + chr8_2:59026327-59026346 Msa1257960:CDS 55.0%
! TTCTAGTCTGGGATCAGCCG+TGG + chr8_2:59026688-59026707 Msa1257960:three_prime_UTR 55.0%
!! TTGTGGCAGGGCTTGTTGCC+AGG - chr8_2:59025459-59025478 None:intergenic 60.0%
TGGCAACAAGCCCTGCCACA+AGG + chr8_2:59025458-59025477 Msa1257960:CDS 60.0%
CCGTGTCAGTGGCAACGATC+AGG + chr8_2:59026317-59026336 Msa1257960:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 59023894 59026752 59023894 ID=Msa1257960;Name=Msa1257960
chr8_2 mRNA 59023894 59026752 59023894 ID=Msa1257960-mRNA-1;Parent=Msa1257960;Name=Msa1257960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=104|1|1|1|1|1|3|101|560
chr8_2 exon 59023894 59024495 59023894 ID=Msa1257960-mRNA-1:exon:18257;Parent=Msa1257960-mRNA-1
chr8_2 exon 59025340 59026148 59025340 ID=Msa1257960-mRNA-1:exon:18258;Parent=Msa1257960-mRNA-1
chr8_2 exon 59026276 59026752 59026276 ID=Msa1257960-mRNA-1:exon:18259;Parent=Msa1257960-mRNA-1
chr8_2 five_prime_UTR 59023894 59023997 59023894 ID=Msa1257960-mRNA-1:five_prime_utr;Parent=Msa1257960-mRNA-1
chr8_2 CDS 59023998 59024495 59023998 ID=Msa1257960-mRNA-1:cds;Parent=Msa1257960-mRNA-1
chr8_2 CDS 59025340 59026148 59025340 ID=Msa1257960-mRNA-1:cds;Parent=Msa1257960-mRNA-1
chr8_2 CDS 59026276 59026651 59026276 ID=Msa1257960-mRNA-1:cds;Parent=Msa1257960-mRNA-1
chr8_2 three_prime_UTR 59026652 59026752 59026652 ID=Msa1257960-mRNA-1:three_prime_utr;Parent=Msa1257960-mRNA-1
Gene Sequence

>Msa1257960

ATGGACAAGAAACCTACTAATTCTTTCCAAACTCATTTTATGGACATACATGATGAAGTTTTATCCGAAGGAGACGAAGAAGGGACGATAAAAAACGAGGAAAATGAAGAGAAGAACTTAAATAAACCAACAACGAGAGCTCGAGAAACGAAGAGAAACCATAGAAGTATTAACAGACAATTTTCACTTGAGACAGGTTTTTCTGTTCTCAACAGAGAAAGAAAAGGTAAAGATGAGAGAAAGGTTTTGACAAGAAGTGGAACCAGCTTAGGAGGGGCAAATAGGTTTGGTTTGGAAGGACAGAAAAGAGATTTCAGTATCTTTAAGACGAAATCTACGCTTAGTAAGCAGAATTCTTTGTTGCCGAGGAAAGTAGAGAAGGAGTTGGAGTCTCAGAAGATTAATGGTGCTGGTGTGGATGATGATTCTGTTAATGCAAGTGTTCCTGCTGGTAGATACTTTGCTGCTCTTAGAGGACCTGAGTTAGATGAAGTCAAGGACTATGAGGACATCCTTCTCCCTACCGATGAAAAGTGGCCCTTTCTCCTTCGGTTTCCTATCGGATGTTTTGGTATCTGTCTAGGACTAAGCAGCCAAGCGGTTCTGTGGCTTAACCTGGCAACAAGCCCTGCCACAAGGTTTCTCCATGTTTCTCCGGATATAAGTTTTTTAATATGGCTGTTATCCTTAGCAGTGCTAATAGCAGTTTCTATTACCTACATTCTCAAATGCATATTCTACTTTGAAGCAGTCAGAAGAGAGTATTTCCATCCAGTTCGAATCAACTTCTTCTTTGCCCCTTGGGTTGTATGCATGTTTTTGGCCATCTCTGTACCCTCCAGAATAGTCCCAAAACAAACCCTTCACCCTGCCATTTGGTGCACTTTCATAGTACCATATTTTCTTCTTGAACTCAAAATATATGGCCAGTGGCTTTCTGGAGGCAAACGACGTCTGTCTAAGGTTGCAAATCCCTCTAACCATCTTTCTGTATCTGGTAACTTTGTTGGAGCAATTCTAGCTTCAAAAGTGGGTTGGAAAGAACCTGCTAAGTTCTTTTGGGCTGTTGGCTTTGCACATTACCTTGTGGTATTTGTTACATTGTATCAGAGATTACCAACAAGTGAGGCATTGCCTAAAGAATTGCATCCTGTGTACTCCATGTTTATTGCCGCTCCTTCTGCGGCTTGTATTGCTTGGCAGAGTATCTATGGAGAGTTTGATGGGATATCCAGAAATTGCTACTTCATTGCCTTGTTTCTCTACATTTCCCTTGTCGTCCGGATCAAATTCTTCACTGGTTTTAGGTTTTCAGTGGCGTGGTGGGCTTACACCTTTCCGATGACAACCGTGTCAGTGGCAACGATCAGGTATGCAGAGGCGGTCCCTGCCTACATAACTAAGGGTCTTGCTCTTGGCCTTGCATTTATGTCATCAACTATGGTTTCTGTTTTGTTTGTGTCCACTCTTCTGCATGCCTTCTATTGGCGCACTTTGTTCCCAAATGATCTTGCTATTGCTATAACGAAGAGGAAGAAAGGTGGGGAGAAGAAACCCCTGAAGAAGGCCTATGACATAAAGCGTTGGACAAAGAAAGCTCTGACCAAGAATTCAGAGAACAAAGATAATAGTAAGAATAATGGCTACAACAGCCAATGCGATAATAGCAGTGTCATGGCCTAG

Protein sequence

>Msa1257960

MDKKPTNSFQTHFMDIHDEVLSEGDEEGTIKNEENEEKNLNKPTTRARETKRNHRSINRQFSLETGFSVLNRERKGKDERKVLTRSGTSLGGANRFGLEGQKRDFSIFKTKSTLSKQNSLLPRKVEKELESQKINGAGVDDDSVNASVPAGRYFAALRGPELDEVKDYEDILLPTDEKWPFLLRFPIGCFGICLGLSSQAVLWLNLATSPATRFLHVSPDISFLIWLLSLAVLIAVSITYILKCIFYFEAVRREYFHPVRINFFFAPWVVCMFLAISVPSRIVPKQTLHPAIWCTFIVPYFLLELKIYGQWLSGGKRRLSKVANPSNHLSVSGNFVGAILASKVGWKEPAKFFWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAACIAWQSIYGEFDGISRNCYFIALFLYISLVVRIKFFTGFRFSVAWWAYTFPMTTVSVATIRYAEAVPAYITKGLALGLAFMSSTMVSVLFVSTLLHAFYWRTLFPNDLAIAITKRKKGGEKKPLKKAYDIKRWTKKALTKNSENKDNSKNNGYNSQCDNSSVMA*