Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864320 | XP_024638930.2 | 88.427 | 1011 | 53 | 13 | 1 | 983 | 29 | 1003 | 0.0 | 1710 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864320 | sp|Q9SJQ6|ROS1_ARATH | 44.462 | 641 | 291 | 15 | 365 | 974 | 773 | 1379 | 1.59e-153 | 493 |
Msa0864320 | sp|Q9SJQ6|ROS1_ARATH | 58.182 | 110 | 41 | 2 | 274 | 379 | 522 | 630 | 4.19e-22 | 107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864320 | G7KEG3 | 87.183 | 749 | 43 | 9 | 253 | 983 | 1 | 714 | 0.0 | 1274 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0713530 | Msa0864320 | 0.816781 | 4.632385e-52 | -8.615850e-47 |
Msa0741280 | Msa0864320 | 0.847730 | 9.609323e-60 | -8.615850e-47 |
Msa0747660 | Msa0864320 | 0.802713 | 4.924396e-49 | -8.615850e-47 |
Msa0755590 | Msa0864320 | 0.800710 | 1.268744e-48 | -8.615850e-47 |
Msa0797240 | Msa0864320 | 0.822002 | 2.990582e-53 | -8.615850e-47 |
Msa0829770 | Msa0864320 | 0.800556 | 1.363363e-48 | -8.615850e-47 |
Msa0835010 | Msa0864320 | 0.814308 | 1.645819e-51 | -8.615850e-47 |
Msa0190470 | Msa0864320 | 0.807908 | 4.016399e-50 | -8.615850e-47 |
Msa0232660 | Msa0864320 | 0.800516 | 1.389340e-48 | -8.615850e-47 |
Msa0526520 | Msa0864320 | 0.800290 | 1.544902e-48 | -8.615850e-47 |
Msa0571900 | Msa0864320 | 0.800692 | 1.278941e-48 | -8.615850e-47 |
Msa0864320 | Msa1089130 | 0.811465 | 6.906610e-51 | -8.615850e-47 |
Msa0864320 | Msa1207710 | 0.819478 | 1.137227e-52 | -8.615850e-47 |
Msa0864320 | Msa1257960 | 0.815696 | 8.099152e-52 | -8.615850e-47 |
Msa0864320 | Msa1298980 | 0.817277 | 3.584975e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864320 | MtrunA17_Chr5g0446571 | 89.391 | 509 | 28 | 3 | 167 | 674 | 1 | 484 | 0.0 | 860 |
Msa0864320 | MtrunA17_Chr2g0279191 | 71.838 | 593 | 131 | 5 | 39 | 629 | 2 | 560 | 0.0 | 820 |
Msa0864320 | MtrunA17_Chr1g0198151 | 47.417 | 542 | 234 | 11 | 464 | 974 | 1251 | 1772 | 4.58e-156 | 504 |
Msa0864320 | MtrunA17_Chr1g0198151 | 43.529 | 170 | 78 | 3 | 241 | 392 | 713 | 882 | 5.69e-26 | 115 |
Msa0864320 | MtrunA17_Chr1g0179341 | 46.377 | 552 | 248 | 10 | 463 | 974 | 1606 | 2149 | 5.52e-150 | 492 |
Msa0864320 | MtrunA17_Chr1g0179341 | 60.748 | 107 | 37 | 2 | 274 | 377 | 1162 | 1266 | 8.52e-20 | 95.9 |
Msa0864320 | MtrunA17_Chr7g0265771 | 43.696 | 579 | 248 | 10 | 468 | 974 | 1180 | 1752 | 1.70e-145 | 475 |
Msa0864320 | MtrunA17_Chr7g0265771 | 46.835 | 158 | 64 | 6 | 254 | 393 | 673 | 828 | 1.03e-22 | 105 |
Msa0864320 | MtrunA17_Chr5g0446581 | 78.090 | 178 | 12 | 6 | 689 | 849 | 1 | 168 | 8.26e-77 | 249 |
Msa0864320 | MtrunA17_Chr5g0446591 | 91.803 | 61 | 5 | 0 | 879 | 939 | 4 | 64 | 8.45e-34 | 124 |
Msa0864320 | MtrunA17_Chr2g0279201 | 81.967 | 61 | 11 | 0 | 879 | 939 | 4 | 64 | 9.24e-31 | 115 |
Msa0864320 | MtrunA17_Chr2g0320931 | 60.606 | 99 | 39 | 0 | 337 | 435 | 2 | 100 | 2.45e-28 | 110 |
Msa0864320 | MtrunA17_Chr4g0059441 | 31.707 | 123 | 84 | 0 | 491 | 613 | 115 | 237 | 1.07e-13 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864320 | AT2G36490.1 | 44.462 | 641 | 291 | 15 | 365 | 974 | 773 | 1379 | 1.62e-154 | 493 |
Msa0864320 | AT2G36490.1 | 58.182 | 110 | 41 | 2 | 274 | 379 | 522 | 630 | 4.26e-23 | 107 |
Msa0864320 | AT5G04560.1 | 46.898 | 548 | 240 | 10 | 463 | 974 | 1186 | 1718 | 5.61e-152 | 492 |
Msa0864320 | AT5G04560.1 | 49.359 | 156 | 65 | 5 | 251 | 394 | 666 | 819 | 9.01e-28 | 122 |
Msa0864320 | AT5G04560.3 | 46.898 | 548 | 240 | 10 | 463 | 974 | 1186 | 1718 | 5.61e-152 | 492 |
Msa0864320 | AT5G04560.3 | 49.359 | 156 | 65 | 5 | 251 | 394 | 666 | 819 | 9.01e-28 | 122 |
Msa0864320 | AT5G04560.2 | 46.898 | 548 | 240 | 10 | 463 | 974 | 1444 | 1976 | 2.81e-150 | 491 |
Msa0864320 | AT5G04560.2 | 49.359 | 156 | 65 | 5 | 251 | 394 | 924 | 1077 | 1.19e-27 | 122 |
Msa0864320 | AT4G34060.5 | 36.748 | 781 | 402 | 18 | 231 | 974 | 107 | 832 | 2.81e-137 | 433 |
Msa0864320 | AT4G34060.4 | 36.748 | 781 | 402 | 18 | 231 | 974 | 244 | 969 | 1.98e-136 | 435 |
Msa0864320 | AT4G34060.1 | 36.748 | 781 | 402 | 18 | 231 | 974 | 303 | 1028 | 6.40e-136 | 435 |
Msa0864320 | AT4G34060.3 | 36.748 | 781 | 402 | 18 | 231 | 974 | 364 | 1089 | 2.57e-135 | 435 |
Msa0864320 | AT3G10010.1 | 42.831 | 551 | 259 | 8 | 463 | 974 | 785 | 1318 | 4.32e-132 | 431 |
Msa0864320 | AT3G10010.1 | 54.369 | 103 | 44 | 1 | 278 | 377 | 495 | 597 | 1.21e-13 | 76.3 |
Msa0864320 | AT3G10010.2 | 42.831 | 551 | 259 | 8 | 463 | 974 | 785 | 1318 | 4.32e-132 | 431 |
Msa0864320 | AT3G10010.2 | 54.369 | 103 | 44 | 1 | 278 | 377 | 495 | 597 | 1.21e-13 | 76.3 |
Msa0864320 | AT4G34060.2 | 37.058 | 707 | 353 | 18 | 231 | 900 | 303 | 954 | 1.32e-120 | 392 |
Msa0864320 | AT3G47830.1 | 31.707 | 123 | 84 | 0 | 491 | 613 | 128 | 250 | 3.59e-12 | 68.9 |
Find 150 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAATGTTGGACACAATTT+TGG | 0.108422 | 5_4:+64649455 | Msa0864320:CDS |
TTCTTTAATTTCTCTGGATA+TGG | 0.171730 | 5_4:-64648953 | None:intergenic |
CAAAGATTCAAAGGTTTATC+AGG | 0.181892 | 5_4:+64649198 | Msa0864320:CDS |
ATCGGACAAGCATTGCAATT+TGG | 0.190300 | 5_4:-64651847 | None:intergenic |
GCTGATCATTAACATCATTT+TGG | 0.207758 | 5_4:-64648883 | None:intergenic |
TACACTTACTTTGCTTCATT+TGG | 0.238782 | 5_4:-64651042 | None:intergenic |
CTCCAACAATTATCAGAGTA+TGG | 0.241689 | 5_4:-64652371 | None:intergenic |
CAATTAATGTTCCTAGAAAA+TGG | 0.251519 | 5_4:+64654281 | Msa0864320:CDS |
AAGAAACAGATAGCATATTT+TGG | 0.258696 | 5_4:+64654316 | Msa0864320:CDS |
TGCTTCGGAGTTGAAGGTTT+TGG | 0.258889 | 5_4:-64649001 | None:intergenic |
TGCTTCGGAGTTGAAGGTTT+TGG | 0.258889 | 5_4:-64649073 | None:intergenic |
TCAAAATTCAACAATATCTT+TGG | 0.264764 | 5_4:+64651576 | Msa0864320:CDS |
CACTAGGGTCATTAAATAAA+AGG | 0.265368 | 5_4:+64648852 | Msa0864320:intron |
TTATGTATTTGAATTGATTC+TGG | 0.265653 | 5_4:-64651424 | None:intergenic |
CATAATTGCTTATAAAATTC+AGG | 0.270783 | 5_4:+64650864 | Msa0864320:CDS |
TGGAATTTCTTTAATTTCTC+TGG | 0.287645 | 5_4:-64648959 | None:intergenic |
TCGGACAAGCATTGCAATTT+GGG | 0.288104 | 5_4:-64651846 | None:intergenic |
CCCCTTATCTTCTGGTTGTA+TGG | 0.291113 | 5_4:+64653686 | Msa0864320:CDS |
ATCTCTGGCCCTTTGCAAAC+GGG | 0.302398 | 5_4:-64649411 | None:intergenic |
GCGTGCACTGAAGGGATTTA+TGG | 0.307586 | 5_4:+64650975 | Msa0864320:intron |
GATTGATCTGTGGTTGGTTT+TGG | 0.308599 | 5_4:-64652305 | None:intergenic |
TAGAAGAGAAAGAATAAGTT+TGG | 0.312327 | 5_4:+64649375 | Msa0864320:CDS |
AAGAAAACTCTACCATAAAA+TGG | 0.317142 | 5_4:+64649735 | Msa0864320:CDS |
CATTATCAGTTGATAACCTT+TGG | 0.322958 | 5_4:+64651722 | Msa0864320:CDS |
GGATATGGAGACACCACTTT+AGG | 0.331042 | 5_4:-64648938 | None:intergenic |
AAATGACTGTTTGTAGCATT+TGG | 0.331522 | 5_4:-64652662 | None:intergenic |
ATGCATTGGCATGATCCATT+TGG | 0.338385 | 5_4:-64652340 | None:intergenic |
TCTCCATCATCGACGAATAA+TGG | 0.350818 | 5_4:-64649145 | None:intergenic |
AACAGTTCTTGGAACACTTC+TGG | 0.355090 | 5_4:+64653985 | Msa0864320:CDS |
TATACTTGAAAAGAAAATAT+TGG | 0.355229 | 5_4:+64650690 | Msa0864320:CDS |
TCCCATACTCTGATAATTGT+TGG | 0.366920 | 5_4:+64652369 | Msa0864320:CDS |
GATGCGGGCATCTCAATTAT+AGG | 0.369192 | 5_4:-64652440 | None:intergenic |
ATGTTCCTAGAAAATGGATA+TGG | 0.370059 | 5_4:+64654287 | Msa0864320:CDS |
GATCTCTGGCCCTTTGCAAA+CGG | 0.370152 | 5_4:-64649412 | None:intergenic |
TAAATCACTTATAACTCATT+TGG | 0.376332 | 5_4:-64655733 | None:intergenic |
CAATGATGTGCTTTCATGTT+CGG | 0.379965 | 5_4:-64652465 | None:intergenic |
AGAATCTGAGTTCCTCTCTA+TGG | 0.380275 | 5_4:-64650608 | None:intergenic |
TTCCTCTGCTTCGGAGTTGA+AGG | 0.382168 | 5_4:-64649007 | None:intergenic |
TTCCTCTGCTTCGGAGTTGA+AGG | 0.382168 | 5_4:-64649079 | None:intergenic |
TGATCCATCCCCTTATCTTC+TGG | 0.382226 | 5_4:+64653678 | Msa0864320:CDS |
AATTTCTTTGTCATCAACTT+TGG | 0.390007 | 5_4:-64650569 | None:intergenic |
TTTGGAGTGTCGTTGCTTCC+GGG | 0.390139 | 5_4:-64648983 | None:intergenic |
ACTTACTTTGCTTCATTTGG+TGG | 0.393936 | 5_4:-64651039 | None:intergenic |
ACCATGGAAAGGCTCAGTTT+TGG | 0.397302 | 5_4:+64650267 | Msa0864320:CDS |
AGTCAGACTGAAACAGTTCT+TGG | 0.399032 | 5_4:+64653974 | Msa0864320:CDS |
ACGAAGAGACATTACGAGTA+TGG | 0.400107 | 5_4:+64649644 | Msa0864320:CDS |
CTTCTGGTTGTATGGCTGCC+AGG | 0.401721 | 5_4:+64653694 | Msa0864320:CDS |
TTTAACTTTACCTTGACAAA+TGG | 0.410634 | 5_4:-64650330 | None:intergenic |
CAGAAAATGACTTCATTGTC+AGG | 0.411077 | 5_4:+64649286 | Msa0864320:CDS |
GGAAAAGAAAATGCAACATT+GGG | 0.412481 | 5_4:+64650711 | Msa0864320:CDS |
GATCAAGTGCATACTGTTCA+AGG | 0.418609 | 5_4:+64649772 | Msa0864320:CDS |
TGCATTGGCATGATCCATTT+GGG | 0.421828 | 5_4:-64652339 | None:intergenic |
CTAGTTGAGAGTAGGAGAAT+TGG | 0.424923 | 5_4:+64649316 | Msa0864320:CDS |
ATCATGCGAACTCTGTTGAT+TGG | 0.437720 | 5_4:+64650776 | Msa0864320:CDS |
GATTCTGGTAATGGTTGTAA+AGG | 0.445716 | 5_4:-64651409 | None:intergenic |
ATTTGAATTGATTCTGGTAA+TGG | 0.446941 | 5_4:-64651418 | None:intergenic |
ATTCTGGTAATGGTTGTAAA+GGG | 0.447281 | 5_4:-64651408 | None:intergenic |
TGAACATAAGAGGAGGTATT+GGG | 0.450907 | 5_4:+64649705 | Msa0864320:CDS |
ATGAACATAAGAGGAGGTAT+TGG | 0.451692 | 5_4:+64649704 | Msa0864320:CDS |
GCCATACAACCAGAAGATAA+GGG | 0.455483 | 5_4:-64653687 | None:intergenic |
TCATCATGCCTGCCGATGTA+TGG | 0.460052 | 5_4:+64652578 | Msa0864320:CDS |
ATGTTCCATTCAAAGGAAAA+CGG | 0.464971 | 5_4:-64654120 | None:intergenic |
AAAATAGATGATATAGGTCT+TGG | 0.465467 | 5_4:-64655669 | None:intergenic |
ATCAATTGTAGCAACCCAAA+TGG | 0.468364 | 5_4:+64652325 | Msa0864320:CDS |
TGGAAAAGAAAATGCAACAT+TGG | 0.470264 | 5_4:+64650710 | Msa0864320:CDS |
ATTCTAAATTCATGCTTCCA+TGG | 0.470972 | 5_4:-64651002 | None:intergenic |
TCATCGCTAACTAATTTGAC+AGG | 0.475212 | 5_4:-64650448 | None:intergenic |
GGAACTCAGATTCTCGTAGT+AGG | 0.476062 | 5_4:+64650617 | Msa0864320:CDS |
ATCTGCCATCGTATACAATT+CGG | 0.478217 | 5_4:+64649252 | Msa0864320:CDS |
TGAAAGTATGTTCCATTCAA+AGG | 0.479284 | 5_4:-64654127 | None:intergenic |
TGTTCCATTCAAAGGAAAAC+GGG | 0.480045 | 5_4:-64654119 | None:intergenic |
ATGGAAGCATGAATTTAGAA+TGG | 0.481227 | 5_4:+64651004 | Msa0864320:CDS |
CACTCTCATAAGTATAATCA+TGG | 0.482577 | 5_4:-64652508 | None:intergenic |
AACGGGCTCTCATTGCAGTT+CGG | 0.484773 | 5_4:-64654102 | None:intergenic |
GCAACACAACGGACAGACTT+AGG | 0.485288 | 5_4:+64655697 | Msa0864320:CDS |
TACCAATGTAGGTTTGTCAA+TGG | 0.485334 | 5_4:+64655495 | Msa0864320:intron |
CTTTCATGTTCGGGTGATGC+GGG | 0.485777 | 5_4:-64652455 | None:intergenic |
TATTTACATTCGTCCTTCAT+CGG | 0.488396 | 5_4:-64651865 | None:intergenic |
AGCCATACAACCAGAAGATA+AGG | 0.488404 | 5_4:-64653688 | None:intergenic |
GGAATATTTCAAAGATTCAA+AGG | 0.489974 | 5_4:+64649189 | Msa0864320:CDS |
TGATCAAGTTTGCATAGTCT+TGG | 0.495087 | 5_4:-64651599 | None:intergenic |
ATATTTGTAGCGTGCACTGA+AGG | 0.495187 | 5_4:+64650966 | Msa0864320:intron |
AATGATGTGCTTTCATGTTC+GGG | 0.496888 | 5_4:-64652464 | None:intergenic |
AAGCCATTATTCGTCGATGA+TGG | 0.498412 | 5_4:+64649142 | Msa0864320:CDS |
GGACGAATTGTTGTACGATT+GGG | 0.499702 | 5_4:+64651379 | Msa0864320:CDS |
AAGAGAATGATGAACATAAG+AGG | 0.503284 | 5_4:+64649695 | Msa0864320:CDS |
TTCGCCCGAGCTTTCTAGAT+CGG | 0.507119 | 5_4:-64653918 | None:intergenic |
CGAGCTGATGTTTCGTCTCA+AGG | 0.507196 | 5_4:+64646779 | Msa0864320:CDS |
TCTCTGGCCCTTTGCAAACG+GGG | 0.511909 | 5_4:-64649410 | None:intergenic |
GAGTGTCGTTGCTTCCGGGA+TGG | 0.513703 | 5_4:-64648979 | None:intergenic |
TCATGCGAACTCTGTTGATT+GGG | 0.517031 | 5_4:+64650777 | Msa0864320:CDS |
TTGCAATGCTTGTCCGATGA+AGG | 0.517404 | 5_4:+64651852 | Msa0864320:CDS |
GCTCTCATTGCAGTTCGGAC+TGG | 0.517673 | 5_4:-64654097 | None:intergenic |
AACATACTTTCAAGTTAATG+AGG | 0.517883 | 5_4:+64654138 | Msa0864320:CDS |
AGTGTTGTTGTCATGAGTGT+TGG | 0.520884 | 5_4:-64649050 | None:intergenic |
ACAATTGATTGATCTGTGGT+TGG | 0.524864 | 5_4:-64652311 | None:intergenic |
GTTAATATGTACCTTTCCAA+AGG | 0.526832 | 5_4:-64651738 | None:intergenic |
AAAGATTCAAAGGTTTATCA+GGG | 0.528203 | 5_4:+64649199 | Msa0864320:CDS |
GAAGAAATATCAACCTAAAG+TGG | 0.530064 | 5_4:+64648925 | Msa0864320:CDS |
TGACTGCTGAAGTTAAATGT+TGG | 0.536681 | 5_4:-64652551 | None:intergenic |
TGGACGAATTGTTGTACGAT+TGG | 0.537128 | 5_4:+64651378 | Msa0864320:CDS |
TAAAGCCGATCTAGAAAGCT+CGG | 0.538043 | 5_4:+64653913 | Msa0864320:intron |
GTTTATGTCTAGTTGAGAGT+AGG | 0.548399 | 5_4:+64649308 | Msa0864320:CDS |
TGGACTGGGTTTGAAAAGTG+TGG | 0.550538 | 5_4:+64651194 | Msa0864320:CDS |
TGAAAGGTGGATGTAAATGT+TGG | 0.551551 | 5_4:+64651358 | Msa0864320:intron |
TGAGAGTGACGAAGATATTG+AGG | 0.552359 | 5_4:+64652523 | Msa0864320:CDS |
TCAGTTGATAACCTTTGGAA+AGG | 0.560599 | 5_4:+64651727 | Msa0864320:CDS |
AATTGTTGTACGATTGGGAT+GGG | 0.560991 | 5_4:+64651384 | Msa0864320:CDS |
TATTTGTAGCGTGCACTGAA+GGG | 0.561768 | 5_4:+64650967 | Msa0864320:intron |
TGCTACAATTGATTGATCTG+TGG | 0.563076 | 5_4:-64652315 | None:intergenic |
TCCAACAATTATCAGAGTAT+GGG | 0.563545 | 5_4:-64652370 | None:intergenic |
CTCTGGCCCTTTGCAAACGG+GGG | 0.566090 | 5_4:-64649409 | None:intergenic |
ATTATGCAAGTTCTCTTGCA+AGG | 0.566239 | 5_4:+64651887 | Msa0864320:CDS |
CGATGCAAAATAGATGATAT+AGG | 0.570163 | 5_4:-64655675 | None:intergenic |
GTTGTTGTCATGAGTGTTGG+CGG | 0.571107 | 5_4:-64649047 | None:intergenic |
TCCAAAACTGAGCCTTTCCA+TGG | 0.572193 | 5_4:-64650268 | None:intergenic |
AACCTTCAACTCCGAAGCAG+AGG | 0.576298 | 5_4:+64649005 | Msa0864320:CDS |
AACCTTCAACTCCGAAGCAG+AGG | 0.576298 | 5_4:+64649077 | Msa0864320:CDS |
TCTCGTCATTGATGATGTCC+CGG | 0.576823 | 5_4:-64654341 | None:intergenic |
GATTCAAAGGTTTATCAGGG+TGG | 0.578189 | 5_4:+64649202 | Msa0864320:CDS |
GTATGGGAAACAATATGCAT+TGG | 0.583379 | 5_4:-64652354 | None:intergenic |
TCTGTTCAGTTATGTCCTCA+CGG | 0.583444 | 5_4:+64653525 | Msa0864320:intron |
GCTTTCATGTTCGGGTGATG+CGG | 0.584502 | 5_4:-64652456 | None:intergenic |
TTGTTACGAAGAGAAAATGT+TGG | 0.591213 | 5_4:+64649443 | Msa0864320:CDS |
AAAGCCGATCTAGAAAGCTC+GGG | 0.593461 | 5_4:+64653914 | Msa0864320:intron |
AGACGATTCTTACCATGGAA+AGG | 0.600387 | 5_4:+64650256 | Msa0864320:CDS |
GAATTGTTGTACGATTGGGA+TGG | 0.601169 | 5_4:+64651383 | Msa0864320:CDS |
AAAGAAGAGTAAGAAACAGG+AGG | 0.611848 | 5_4:+64650660 | Msa0864320:CDS |
ACACCTACCTCTGCTAGAAG+AGG | 0.613665 | 5_4:-64653556 | None:intergenic |
ACTCAGATTCTCGTAGTAGG+AGG | 0.613815 | 5_4:+64650620 | Msa0864320:CDS |
CATTTATGTCACTTGCTGCG+AGG | 0.615123 | 5_4:+64650422 | Msa0864320:CDS |
GTGATAGACGATTCTTACCA+TGG | 0.616260 | 5_4:+64650251 | Msa0864320:CDS |
GATGGATCATCATGTTCTCG+TGG | 0.618593 | 5_4:-64653664 | None:intergenic |
ATAGTTCGTGTTCCATAGAG+AGG | 0.620282 | 5_4:+64650596 | Msa0864320:CDS |
CCATACAACCAGAAGATAAG+GGG | 0.626627 | 5_4:-64653686 | None:intergenic |
CACCTACCTCTGCTAGAAGA+GGG | 0.628524 | 5_4:-64653555 | None:intergenic |
ATGTGTCTGACCATTTGTCA+AGG | 0.628731 | 5_4:+64650320 | Msa0864320:CDS |
ATTGTGAAGCATTAACGCCA+TGG | 0.630733 | 5_4:-64652622 | None:intergenic |
ACAACCAGAAGATAAGGGGA+TGG | 0.637113 | 5_4:-64653682 | None:intergenic |
TAATCACCCTCTTCTAGCAG+AGG | 0.639180 | 5_4:+64653549 | Msa0864320:CDS |
AGAATGATGAACATAAGAGG+AGG | 0.639662 | 5_4:+64649698 | Msa0864320:CDS |
CATCGCTAACTAATTTGACA+GGG | 0.643527 | 5_4:-64650447 | None:intergenic |
AAGGGATTTATGGATAACCA+TGG | 0.651198 | 5_4:+64650985 | Msa0864320:CDS |
AAATTAAAGAAATTCCATCC+CGG | 0.652333 | 5_4:+64648965 | Msa0864320:CDS |
TTGTACCGAATTGTATACGA+TGG | 0.665470 | 5_4:-64649257 | None:intergenic |
AAGCAAGACTGACTTGCATG+AGG | 0.668168 | 5_4:+64653943 | Msa0864320:CDS |
GCTGAAGCTATTGAAAAGCG+TGG | 0.671675 | 5_4:+64650832 | Msa0864320:CDS |
GGATCATCATGTTCTCGTGG+AGG | 0.683144 | 5_4:-64653661 | None:intergenic |
GAAGAGGGTGATTATCCGTG+AGG | 0.707601 | 5_4:-64653540 | None:intergenic |
GGGACATCATCAATGACGAG+AGG | 0.729610 | 5_4:+64654343 | Msa0864320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTTAGAAAATACTT+TGG | + | chr5_4:64649954-64649973 | Msa0864320:intron | 10.0% |
!! | AAAAAAAAAAAAAACTTTAC+GGG | - | chr5_4:64651467-64651486 | None:intergenic | 10.0% |
!! | TTGCATTTATTTATTAAATT+TGG | + | chr5_4:64651916-64651935 | Msa0864320:intron | 10.0% |
!!! | CTTTTATTTGTAAAAAAAAT+TGG | - | chr5_4:64654044-64654063 | None:intergenic | 10.0% |
!!! | CAATTTTTTTTACAAATAAA+AGG | + | chr5_4:64654042-64654061 | Msa0864320:intron | 10.0% |
!!! | ATATTTAAACTATTTTTGAG+AGG | - | chr5_4:64647479-64647498 | None:intergenic | 15.0% |
!! | AACACTTAATTGTAAATTTA+GGG | - | chr5_4:64647612-64647631 | None:intergenic | 15.0% |
!! | AAACACTTAATTGTAAATTT+AGG | - | chr5_4:64647613-64647632 | None:intergenic | 15.0% |
!!! | TTGAGTTTTATTAAGAATTT+TGG | + | chr5_4:64647922-64647941 | Msa0864320:intron | 15.0% |
!!! | TGAGTTTTATTAAGAATTTT+GGG | + | chr5_4:64647923-64647942 | Msa0864320:intron | 15.0% |
!! | ATTAAAGATAATTCAACTTA+TGG | - | chr5_4:64649850-64649869 | None:intergenic | 15.0% |
!!! | GTGTCAAAATATTTTTAAAA+TGG | + | chr5_4:64650158-64650177 | Msa0864320:intron | 15.0% |
!! | AACAACAATGAATTTATAAT+TGG | - | chr5_4:64650189-64650208 | None:intergenic | 15.0% |
!! | ATTAGATTAATAAACTTTGT+AGG | + | chr5_4:64650229-64650248 | Msa0864320:intron | 15.0% |
!!! | TTCATTTTATTATCAGATTT+AGG | - | chr5_4:64650502-64650521 | None:intergenic | 15.0% |
!! | TATACTTGAAAAGAAAATAT+TGG | + | chr5_4:64650690-64650709 | Msa0864320:CDS | 15.0% |
!!! | TGATATAATTTGTCTATATT+AGG | + | chr5_4:64651105-64651124 | Msa0864320:intron | 15.0% |
!!! | GATAATTTTGATTTTCTTAA+TGG | - | chr5_4:64651790-64651809 | None:intergenic | 15.0% |
!! | ATTACATATTACAATTAACA+AGG | - | chr5_4:64652019-64652038 | None:intergenic | 15.0% |
!! | TTATCTCCATAAAAATATAA+TGG | - | chr5_4:64652134-64652153 | None:intergenic | 15.0% |
!! | AAAGAATAACATAAGAATAT+AGG | - | chr5_4:64652749-64652768 | None:intergenic | 15.0% |
!!! | AATTAGGAAAAGAAATTTTA+AGG | - | chr5_4:64653250-64653269 | None:intergenic | 15.0% |
!! | TATAAGAATACACAAAAAAT+AGG | - | chr5_4:64653895-64653914 | None:intergenic | 15.0% |
!! | TTTCATAAAATGTTAAATCT+TGG | - | chr5_4:64654071-64654090 | None:intergenic | 15.0% |
!! | TACATAAAGAAAATGAATTA+AGG | + | chr5_4:64654396-64654415 | Msa0864320:intron | 15.0% |
!!! | ATAAATAAATAACGGATTTA+TGG | + | chr5_4:64654502-64654521 | Msa0864320:intron | 15.0% |
!! | AAAATAACAAAGTTCATTAA+TGG | - | chr5_4:64654584-64654603 | None:intergenic | 15.0% |
!!! | CTTTTTAATATTAGTCTTTT+AGG | - | chr5_4:64655419-64655438 | None:intergenic | 15.0% |
!! | AGACTAATATTAAAAAGAAA+CGG | + | chr5_4:64655422-64655441 | Msa0864320:intron | 15.0% |
!!! | AATGTTCATTTATGTTTTAT+AGG | + | chr5_4:64655606-64655625 | Msa0864320:intron | 15.0% |
!!! | ATGTTCATTTATGTTTTATA+GGG | + | chr5_4:64655607-64655626 | Msa0864320:intron | 15.0% |
!!! | TTTTGCTCTTTAATTTTGAA+GGG | + | chr5_4:64647107-64647126 | Msa0864320:intron | 20.0% |
!! | ACTTCCATTAATTTATTGTT+CGG | - | chr5_4:64647409-64647428 | None:intergenic | 20.0% |
!! | AATATACCTTTACTATCTTT+AGG | + | chr5_4:64647494-64647513 | Msa0864320:intron | 20.0% |
!!! | TTTTTTCCTAAAGATAGTAA+AGG | - | chr5_4:64647503-64647522 | None:intergenic | 20.0% |
!!! | TTAACTAGTTTTATATGCTT+CGG | - | chr5_4:64647702-64647721 | None:intergenic | 20.0% |
!!! | AATTTTCACAAAAGTTTTTG+TGG | + | chr5_4:64647756-64647775 | Msa0864320:intron | 20.0% |
!!! | CCTTTTCATTATTTAGTTTT+TGG | - | chr5_4:64647813-64647832 | None:intergenic | 20.0% |
!! | CCAAAAACTAAATAATGAAA+AGG | + | chr5_4:64647810-64647829 | Msa0864320:intron | 20.0% |
!! | TCTTAATAAAACTCAAACTT+AGG | - | chr5_4:64647918-64647937 | None:intergenic | 20.0% |
!!! | AGGATTTTACTATATGTATT+AGG | + | chr5_4:64648078-64648097 | Msa0864320:intron | 20.0% |
!! | AATGTGTATGGAAAAATATA+TGG | + | chr5_4:64648152-64648171 | Msa0864320:intron | 20.0% |
!! | TATGTTATGTTATCTCAAAT+AGG | - | chr5_4:64648357-64648376 | None:intergenic | 20.0% |
!!! | CTTTGAAATATTCCAAAAAT+GGG | - | chr5_4:64649183-64649202 | None:intergenic | 20.0% |
!!! | TCTTTGAAATATTCCAAAAA+TGG | - | chr5_4:64649184-64649203 | None:intergenic | 20.0% |
!!! | ATTTTCCAATAATGTGTAAA+AGG | + | chr5_4:64649344-64649363 | Msa0864320:CDS | 20.0% |
!!! | TTATCAAAGATCTCATTTTT+TGG | - | chr5_4:64649504-64649523 | None:intergenic | 20.0% |
!! | TCATATTCTATTATTAGCAT+CGG | + | chr5_4:64649817-64649836 | Msa0864320:intron | 20.0% |
!! | TTACAGTTGATTAAAAGATA+TGG | - | chr5_4:64650041-64650060 | None:intergenic | 20.0% |
!!! | CTTAATTTACCCAATTTTTT+TGG | + | chr5_4:64650360-64650379 | Msa0864320:intron | 20.0% |
!! | TATTCAACACCAAAAAAATT+GGG | - | chr5_4:64650372-64650391 | None:intergenic | 20.0% |
!! | ATATTCAACACCAAAAAAAT+TGG | - | chr5_4:64650373-64650392 | None:intergenic | 20.0% |
!! | CATAATTGCTTATAAAATTC+AGG | + | chr5_4:64650864-64650883 | Msa0864320:CDS | 20.0% |
!! | CTTGATTAAAAAAATTCATC+TGG | - | chr5_4:64651134-64651153 | None:intergenic | 20.0% |
!!! | GAATATTTTTTGAGCATATA+TGG | + | chr5_4:64651174-64651193 | Msa0864320:CDS | 20.0% |
!!! | TTATGTATTTGAATTGATTC+TGG | - | chr5_4:64651427-64651446 | None:intergenic | 20.0% |
!!! | AGATATTGTTGAATTTTGAT+TGG | - | chr5_4:64651575-64651594 | None:intergenic | 20.0% |
!! | TCAAAATTCAACAATATCTT+TGG | + | chr5_4:64651576-64651595 | Msa0864320:CDS | 20.0% |
!!! | GCAATGACTTTATTTATTAA+TGG | + | chr5_4:64651946-64651965 | Msa0864320:intron | 20.0% |
!!! | ACTTTATTTATTAATGGAAG+AGG | + | chr5_4:64651952-64651971 | Msa0864320:intron | 20.0% |
!!! | CTTTATTTATTAATGGAAGA+GGG | + | chr5_4:64651953-64651972 | Msa0864320:intron | 20.0% |
!!! | TTGTGTCCATTATATTTTTA+TGG | + | chr5_4:64652125-64652144 | Msa0864320:intron | 20.0% |
!! | GTAACAATAATCTTACAATT+AGG | - | chr5_4:64652170-64652189 | None:intergenic | 20.0% |
!! | TTATACCAAAGTCAATATTA+GGG | - | chr5_4:64652224-64652243 | None:intergenic | 20.0% |
!! | ATTATACCAAAGTCAATATT+AGG | - | chr5_4:64652225-64652244 | None:intergenic | 20.0% |
!! | TCAAAAAAATTACCATACAT+CGG | - | chr5_4:64652593-64652612 | None:intergenic | 20.0% |
!! | AACATGCATAACATTAAATT+AGG | - | chr5_4:64653266-64653285 | None:intergenic | 20.0% |
!! | TTAATGATTATAAACACAGA+AGG | - | chr5_4:64653724-64653743 | None:intergenic | 20.0% |
!!! | TTTCTTAGGTGTTTTTTATA+TGG | - | chr5_4:64654544-64654563 | None:intergenic | 20.0% |
!!! | TGTCAATTGTTTTACAATTC+AGG | - | chr5_4:64646843-64646862 | None:intergenic | 25.0% |
! | TTGACAATTTACTATCTCTA+CGG | + | chr5_4:64646857-64646876 | Msa0864320:intron | 25.0% |
! | ATCAAGTGATGATAAATCTA+TGG | - | chr5_4:64647035-64647054 | None:intergenic | 25.0% |
! | TTAGGAAATTATGTAGAAAG+AGG | - | chr5_4:64647079-64647098 | None:intergenic | 25.0% |
!!! | CTTTTGCTCTTTAATTTTGA+AGG | + | chr5_4:64647106-64647125 | Msa0864320:intron | 25.0% |
! | TGAGCTAATCAAATTCATTA+AGG | - | chr5_4:64647239-64647258 | None:intergenic | 25.0% |
! | TATTGCAATTACCATATATC+AGG | + | chr5_4:64647293-64647312 | Msa0864320:intron | 25.0% |
! | GAATCCGAACAATAAATTAA+TGG | + | chr5_4:64647402-64647421 | Msa0864320:intron | 25.0% |
! | GCAAAATTAATATTCTCAGT+TGG | + | chr5_4:64647565-64647584 | Msa0864320:intron | 25.0% |
! | ATTAATATTCTCAGTTGGAT+CGG | + | chr5_4:64647570-64647589 | Msa0864320:intron | 25.0% |
! | AAACTAGTTAAGTTTGATTC+AGG | + | chr5_4:64647711-64647730 | Msa0864320:intron | 25.0% |
! | GTGACTTATGATTATGATTA+AGG | + | chr5_4:64647844-64647863 | Msa0864320:intron | 25.0% |
!!! | AACCTTTTTTTGACAACTTT+TGG | + | chr5_4:64648402-64648421 | Msa0864320:intron | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr5_4:64648487-64648506 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr5_4:64648500-64648519 | None:intergenic | 25.0% |
! | AATAAGAAGTGAGAAAAACA+AGG | + | chr5_4:64648499-64648518 | Msa0864320:intron | 25.0% |
! | ATCTTCAGTATAGTCATAAA+AGG | - | chr5_4:64648819-64648838 | None:intergenic | 25.0% |
!!! | TTCCTTTTAACTGTTTTTTG+CGG | - | chr5_4:64648908-64648927 | None:intergenic | 25.0% |
!! | TTCTTTAATTTCTCTGGATA+TGG | - | chr5_4:64648956-64648975 | None:intergenic | 25.0% |
!! | TGGAATTTCTTTAATTTCTC+TGG | - | chr5_4:64648962-64648981 | None:intergenic | 25.0% |
! | AAATTAAAGAAATTCCATCC+CGG | + | chr5_4:64648965-64648984 | Msa0864320:CDS | 25.0% |
! | GGAATATTTCAAAGATTCAA+AGG | + | chr5_4:64649189-64649208 | Msa0864320:CDS | 25.0% |
! | AAAGATTCAAAGGTTTATCA+GGG | + | chr5_4:64649199-64649218 | Msa0864320:CDS | 25.0% |
!! | CTTTTCCTTTTACACATTAT+TGG | - | chr5_4:64649352-64649371 | None:intergenic | 25.0% |
! | TAGAAGAGAAAGAATAAGTT+TGG | + | chr5_4:64649375-64649394 | Msa0864320:CDS | 25.0% |
!! | TAACAAAACTTTTTGATCTC+TGG | - | chr5_4:64649429-64649448 | None:intergenic | 25.0% |
!! | AAAATGTTGGACACAATTTT+GGG | + | chr5_4:64649456-64649475 | Msa0864320:CDS | 25.0% |
!! | ATTACTTCAACTTTTGATGA+TGG | - | chr5_4:64649619-64649638 | None:intergenic | 25.0% |
! | AAGAAAACTCTACCATAAAA+TGG | + | chr5_4:64649735-64649754 | Msa0864320:CDS | 25.0% |
!! | AGAATGATATCACCATTTTA+TGG | - | chr5_4:64649750-64649769 | None:intergenic | 25.0% |
! | CATATTCTATTATTAGCATC+GGG | + | chr5_4:64649818-64649837 | Msa0864320:intron | 25.0% |
! | CTGAGCAAAAATTTACTATT+AGG | - | chr5_4:64650082-64650101 | None:intergenic | 25.0% |
!! | TTTAACTTTACCTTGACAAA+TGG | - | chr5_4:64650333-64650352 | None:intergenic | 25.0% |
! | AATTTCTTTGTCATCAACTT+TGG | - | chr5_4:64650572-64650591 | None:intergenic | 25.0% |
! | TAAAAAGAAGAGTAAGAAAC+AGG | + | chr5_4:64650657-64650676 | Msa0864320:CDS | 25.0% |
! | AAGCAAAATGTTCATGTTAT+AGG | + | chr5_4:64651151-64651170 | Msa0864320:intron | 25.0% |
! | AGCAAAATGTTCATGTTATA+GGG | + | chr5_4:64651152-64651171 | Msa0864320:intron | 25.0% |
!! | TCTTCAACATATTTCTTTTC+CGG | + | chr5_4:64651236-64651255 | Msa0864320:CDS | 25.0% |
!!! | TGAAATATGTCACTTTTGAA+AGG | + | chr5_4:64651342-64651361 | Msa0864320:intron | 25.0% |
!! | ATTTGAATTGATTCTGGTAA+TGG | - | chr5_4:64651421-64651440 | None:intergenic | 25.0% |
! | AAATAAATTAAGAAGATGCC+AGG | - | chr5_4:64651641-64651660 | None:intergenic | 25.0% |
!! | ATTTATTTGAGCCTTGTATT+TGG | + | chr5_4:64651653-64651672 | Msa0864320:intron | 25.0% |
! | AGATATATTAGCCAAATACA+AGG | - | chr5_4:64651667-64651686 | None:intergenic | 25.0% |
! | ACATATATGTTGTCTTGTAT+AGG | + | chr5_4:64651690-64651709 | Msa0864320:intron | 25.0% |
! | ATTATCTTAAAATGTTCTGC+AGG | + | chr5_4:64651804-64651823 | Msa0864320:intron | 25.0% |
! | GACAATGCATATATATAATG+TGG | + | chr5_4:64651990-64652009 | Msa0864320:intron | 25.0% |
! | ATATGCTAATATGTATATGC+AGG | + | chr5_4:64652264-64652283 | Msa0864320:intron | 25.0% |
! | TGAGAGTCTTAACAATATTA+AGG | - | chr5_4:64652838-64652857 | None:intergenic | 25.0% |
! | GAACATGCGTTTATAATTTA+CGG | + | chr5_4:64652878-64652897 | Msa0864320:intron | 25.0% |
!! | TCATACAAAACTAGTTTGTA+AGG | - | chr5_4:64652913-64652932 | None:intergenic | 25.0% |
!!! | GAAATGAAGTTTTAGCTTTT+AGG | + | chr5_4:64653188-64653207 | Msa0864320:intron | 25.0% |
! | TACTTTGTACATTTCATCAA+GGG | - | chr5_4:64653301-64653320 | None:intergenic | 25.0% |
! | TTACTTTGTACATTTCATCA+AGG | - | chr5_4:64653302-64653321 | None:intergenic | 25.0% |
!!! | GACACATTTTTTCTTCTAAA+AGG | + | chr5_4:64653822-64653841 | Msa0864320:intron | 25.0% |
!!! | AACATACTTTCAAGTTAATG+AGG | + | chr5_4:64654138-64654157 | Msa0864320:CDS | 25.0% |
! | TAAAGCTTCTATTGCATATT+TGG | + | chr5_4:64654169-64654188 | Msa0864320:intron | 25.0% |
!! | GCAATATCTTTTTCTTTTGT+AGG | + | chr5_4:64654228-64654247 | Msa0864320:intron | 25.0% |
!!! | CATTTTCTAGGAACATTAAT+TGG | - | chr5_4:64654283-64654302 | None:intergenic | 25.0% |
! | CAATTAATGTTCCTAGAAAA+TGG | + | chr5_4:64654281-64654300 | Msa0864320:CDS | 25.0% |
!! | AAGAAACAGATAGCATATTT+TGG | + | chr5_4:64654316-64654335 | Msa0864320:CDS | 25.0% |
! | GAATATCATACACTATACTT+TGG | + | chr5_4:64654371-64654390 | Msa0864320:intron | 25.0% |
! | AAAACTTAGTTCATTTCCTT+AGG | + | chr5_4:64654422-64654441 | Msa0864320:intron | 25.0% |
!!! | AAACTTTGGTGTATTTTCTT+AGG | - | chr5_4:64654558-64654577 | None:intergenic | 25.0% |
!! | TTCATTAATGGACAAAACTT+TGG | - | chr5_4:64654572-64654591 | None:intergenic | 25.0% |
! | AAAGTTAGCACAAATACAAT+CGG | - | chr5_4:64654832-64654851 | None:intergenic | 25.0% |
!!! | TCAAAAATAGATTGGTCTAA+TGG | - | chr5_4:64654896-64654915 | None:intergenic | 25.0% |
! | TAGAACTGTCAAAAATAGAT+TGG | - | chr5_4:64654904-64654923 | None:intergenic | 25.0% |
! | TTGTTAAGGAAACTTAAAAG+AGG | + | chr5_4:64654945-64654964 | Msa0864320:intron | 25.0% |
!!! | TATTAGAAGAGAGTTTTGAA+AGG | + | chr5_4:64655174-64655193 | Msa0864320:intron | 25.0% |
! | ATTCTATCAAATACCAATGT+AGG | + | chr5_4:64655484-64655503 | Msa0864320:intron | 25.0% |
!! | ATTAAAGACTTCTTTTGCAA+AGG | + | chr5_4:64655523-64655542 | Msa0864320:CDS | 25.0% |
! | AAAATAGATGATATAGGTCT+TGG | - | chr5_4:64655672-64655691 | None:intergenic | 25.0% |
AATTTACTATCTCTACGGTT+TGG | + | chr5_4:64646862-64646881 | Msa0864320:intron | 30.0% | |
AGAAACATATGAACATGCTA+TGG | + | chr5_4:64646997-64647016 | Msa0864320:intron | 30.0% | |
! | TAGCATGAGCTTTTACATTT+GGG | - | chr5_4:64647275-64647294 | None:intergenic | 30.0% |
! | ATAGCATGAGCTTTTACATT+TGG | - | chr5_4:64647276-64647295 | None:intergenic | 30.0% |
!! | TTCTAAGGTCATAGATTTGT+TGG | + | chr5_4:64647437-64647456 | Msa0864320:intron | 30.0% |
! | TCTAAGGTCATAGATTTGTT+GGG | + | chr5_4:64647438-64647457 | Msa0864320:intron | 30.0% |
CAGGTGAAAAAATTGCAATT+TGG | + | chr5_4:64647730-64647749 | Msa0864320:intron | 30.0% | |
TAAACCAATGCAAATTGAAC+AGG | - | chr5_4:64647783-64647802 | None:intergenic | 30.0% | |
ACAAAGTCATAAATGTCACA+TGG | - | chr5_4:64647870-64647889 | None:intergenic | 30.0% | |
GTGTATGGAAAAATATATGG+TGG | + | chr5_4:64648155-64648174 | Msa0864320:intron | 30.0% | |
GTCCAAAAGTTGTCAAAAAA+AGG | - | chr5_4:64648407-64648426 | None:intergenic | 30.0% | |
AAAACAATGGAGAGAGAAAA+AGG | - | chr5_4:64648474-64648493 | None:intergenic | 30.0% | |
! | GAGAATTTTTCACTTGTCTA+TGG | + | chr5_4:64648732-64648751 | Msa0864320:intron | 30.0% |
ATGTTGAATTATGTCCACTA+GGG | + | chr5_4:64648837-64648856 | Msa0864320:intron | 30.0% | |
!! | CTTTTATTTAATGACCCTAG+TGG | - | chr5_4:64648854-64648873 | None:intergenic | 30.0% |
CACTAGGGTCATTAAATAAA+AGG | + | chr5_4:64648852-64648871 | Msa0864320:intron | 30.0% | |
! | GCTGATCATTAACATCATTT+TGG | - | chr5_4:64648886-64648905 | None:intergenic | 30.0% |
GAAGAAATATCAACCTAAAG+TGG | + | chr5_4:64648925-64648944 | Msa0864320:CDS | 30.0% | |
CAAAGATTCAAAGGTTTATC+AGG | + | chr5_4:64649198-64649217 | Msa0864320:CDS | 30.0% | |
TTGTTACGAAGAGAAAATGT+TGG | + | chr5_4:64649443-64649462 | Msa0864320:CDS | 30.0% | |
! | GAAAATGTTGGACACAATTT+TGG | + | chr5_4:64649455-64649474 | Msa0864320:CDS | 30.0% |
!!! | TCGATGCATTTTTTTCTTCA+AGG | - | chr5_4:64649539-64649558 | None:intergenic | 30.0% |
AAGAGAATGATGAACATAAG+AGG | + | chr5_4:64649695-64649714 | Msa0864320:CDS | 30.0% | |
!!! | AACCAACCTTTTTTTTTAGC+AGG | + | chr5_4:64649890-64649909 | Msa0864320:intron | 30.0% |
ATTTCCTGAAATTTGTCCAT+GGG | - | chr5_4:64649917-64649936 | None:intergenic | 30.0% | |
TGGAAAAGAAAATGCAACAT+TGG | + | chr5_4:64650710-64650729 | Msa0864320:CDS | 30.0% | |
GGAAAAGAAAATGCAACATT+GGG | + | chr5_4:64650711-64650730 | Msa0864320:CDS | 30.0% | |
ATTCTAAATTCATGCTTCCA+TGG | - | chr5_4:64651005-64651024 | None:intergenic | 30.0% | |
! | ATGGAAGCATGAATTTAGAA+TGG | + | chr5_4:64651004-64651023 | Msa0864320:CDS | 30.0% |
TACACTTACTTTGCTTCATT+TGG | - | chr5_4:64651045-64651064 | None:intergenic | 30.0% | |
!!! | TTTTTTGAGCATATATGGAC+TGG | + | chr5_4:64651179-64651198 | Msa0864320:CDS | 30.0% |
!! | TTTTTGAGCATATATGGACT+GGG | + | chr5_4:64651180-64651199 | Msa0864320:CDS | 30.0% |
GTGTCTACTTATATTCTTAC+CGG | - | chr5_4:64651258-64651277 | None:intergenic | 30.0% | |
!!! | AATATGTCACTTTTGAAAGG+TGG | + | chr5_4:64651345-64651364 | Msa0864320:intron | 30.0% |
!! | ATTCTGGTAATGGTTGTAAA+GGG | - | chr5_4:64651411-64651430 | None:intergenic | 30.0% |
!!! | TAACCATGTTGTTTTGAAAC+AGG | + | chr5_4:64651540-64651559 | Msa0864320:intron | 30.0% |
AAACCTGTTTCAAAACAACA+TGG | - | chr5_4:64651546-64651565 | None:intergenic | 30.0% | |
!!! | TGTTGAATTTTGATTGGATC+CGG | - | chr5_4:64651569-64651588 | None:intergenic | 30.0% |
CATCATACATTGTAATTACC+TGG | + | chr5_4:64651620-64651639 | Msa0864320:intron | 30.0% | |
!! | CATTATCAGTTGATAACCTT+TGG | + | chr5_4:64651722-64651741 | Msa0864320:CDS | 30.0% |
GTTAATATGTACCTTTCCAA+AGG | - | chr5_4:64651741-64651760 | None:intergenic | 30.0% | |
TATTTACATTCGTCCTTCAT+CGG | - | chr5_4:64651868-64651887 | None:intergenic | 30.0% | |
AAACAATGCATATGTGTATG+TGG | - | chr5_4:64652192-64652211 | None:intergenic | 30.0% | |
AGTCAATATTAGGGAGTAAA+TGG | - | chr5_4:64652215-64652234 | None:intergenic | 30.0% | |
!! | TTACTCCCTAATATTGACTT+TGG | + | chr5_4:64652216-64652235 | Msa0864320:intron | 30.0% |
TCCAACAATTATCAGAGTAT+GGG | - | chr5_4:64652373-64652392 | None:intergenic | 30.0% | |
CACTCTCATAAGTATAATCA+TGG | - | chr5_4:64652511-64652530 | None:intergenic | 30.0% | |
!!! | TTTTTTGAAGAGTTTGACCA+TGG | + | chr5_4:64652605-64652624 | Msa0864320:CDS | 30.0% |
AAATGACTGTTTGTAGCATT+TGG | - | chr5_4:64652665-64652684 | None:intergenic | 30.0% | |
CTCTCATATTAGATGAGATA+TGG | + | chr5_4:64652852-64652871 | Msa0864320:intron | 30.0% | |
AAAGATGATGATAACACTCT+TGG | - | chr5_4:64652959-64652978 | None:intergenic | 30.0% | |
! | GTAAATAGTTGATATGCATG+TGG | + | chr5_4:64653318-64653337 | Msa0864320:intron | 30.0% |
ATGTTCCATTCAAAGGAAAA+CGG | - | chr5_4:64654123-64654142 | None:intergenic | 30.0% | |
! | TGAAAGTATGTTCCATTCAA+AGG | - | chr5_4:64654130-64654149 | None:intergenic | 30.0% |
ATGTTCCTAGAAAATGGATA+TGG | + | chr5_4:64654287-64654306 | Msa0864320:CDS | 30.0% | |
! | AGATTCCATATCCATTTTCT+AGG | - | chr5_4:64654295-64654314 | None:intergenic | 30.0% |
ACTCTTGTTAATAAGTAGAG+CGG | + | chr5_4:64654781-64654800 | Msa0864320:intron | 30.0% | |
! | TTCTATTATCGAAGTTCTGA+AGG | + | chr5_4:64654919-64654938 | Msa0864320:intron | 30.0% |
TTAAGGAAACTTAAAAGAGG+AGG | + | chr5_4:64654948-64654967 | Msa0864320:intron | 30.0% | |
!!! | TGGGTTTTGAAAAAAAAGGA+AGG | + | chr5_4:64655048-64655067 | Msa0864320:intron | 30.0% |
GGAAGAAATAGAAGAACATT+AGG | + | chr5_4:64655078-64655097 | Msa0864320:intron | 30.0% | |
AGAAATAGAAGAACATTAGG+AGG | + | chr5_4:64655081-64655100 | Msa0864320:intron | 30.0% | |
! | TTGTTTAGTTCCTCAAAATG+AGG | - | chr5_4:64655151-64655170 | None:intergenic | 30.0% |
! | CTTTGTTTGGATGTTTAGAA+GGG | - | chr5_4:64655372-64655391 | None:intergenic | 30.0% |
AAATGTTAACAAGTGTCCTA+AGG | - | chr5_4:64655395-64655414 | None:intergenic | 30.0% | |
TAAAAAGAAACGGCTAGAAT+TGG | + | chr5_4:64655432-64655451 | Msa0864320:intron | 30.0% | |
AGAGCAATTGATACAAAAAC+AGG | + | chr5_4:64655642-64655661 | Msa0864320:CDS | 30.0% | |
CGATGCAAAATAGATGATAT+AGG | - | chr5_4:64655678-64655697 | None:intergenic | 30.0% | |
AACAAACATTTCACAGCGAA+AGG | - | chr5_4:64646932-64646951 | None:intergenic | 35.0% | |
!! | CTTGATGATGTTGTTTCAAG+TGG | + | chr5_4:64647049-64647068 | Msa0864320:intron | 35.0% |
AAGAGCAAAAGCTTCAACTT+AGG | - | chr5_4:64647097-64647116 | None:intergenic | 35.0% | |
GTGTCTAGTAACCTGATATA+TGG | - | chr5_4:64647307-64647326 | None:intergenic | 35.0% | |
ACTAGACACTAATCACTTGA+TGG | + | chr5_4:64647318-64647337 | Msa0864320:intron | 35.0% | |
CTAGACACTAATCACTTGAT+GGG | + | chr5_4:64647319-64647338 | Msa0864320:intron | 35.0% | |
TAGACACTAATCACTTGATG+GGG | + | chr5_4:64647320-64647339 | Msa0864320:intron | 35.0% | |
GCAATTACTATGTGATAGAG+TGG | + | chr5_4:64647356-64647375 | Msa0864320:intron | 35.0% | |
!! | TGGCGTTACAAGTTATTTCT+AGG | + | chr5_4:64647376-64647395 | Msa0864320:intron | 35.0% |
!! | GGCGTTACAAGTTATTTCTA+GGG | + | chr5_4:64647377-64647396 | Msa0864320:intron | 35.0% |
!! | GCGTTACAAGTTATTTCTAG+GGG | + | chr5_4:64647378-64647397 | Msa0864320:intron | 35.0% |
! | TGGAAGTGAATCGATTTCTA+AGG | + | chr5_4:64647422-64647441 | Msa0864320:intron | 35.0% |
TTGGATCGGATTCATATTAG+AGG | + | chr5_4:64647584-64647603 | Msa0864320:intron | 35.0% | |
ATCATAAGTCACTCAAGTCT+AGG | - | chr5_4:64647836-64647855 | None:intergenic | 35.0% | |
!!! | GAATTTTGGGTGCTATTTGA+AGG | + | chr5_4:64647936-64647955 | Msa0864320:intron | 35.0% |
TGTAGTCATAGTCGAGAAAT+AGG | - | chr5_4:64648107-64648126 | None:intergenic | 35.0% | |
TTTCTCGACTATGACTACAT+TGG | + | chr5_4:64648108-64648127 | Msa0864320:intron | 35.0% | |
!! | ACTATGACTACATTGGTTCA+AGG | + | chr5_4:64648115-64648134 | Msa0864320:intron | 35.0% |
TGGTATCTAGTCAATGTGTA+TGG | + | chr5_4:64648140-64648159 | Msa0864320:intron | 35.0% | |
TCTCAAATAGGAAGCTCAAT+TGG | - | chr5_4:64648345-64648364 | None:intergenic | 35.0% | |
TTTCTTATCCATGCAAGGAT+TGG | + | chr5_4:64648625-64648644 | Msa0864320:intron | 35.0% | |
AAATTGTACCAATCCTTGCA+TGG | - | chr5_4:64648636-64648655 | None:intergenic | 35.0% | |
GATGTTGAATTATGTCCACT+AGG | + | chr5_4:64648836-64648855 | Msa0864320:intron | 35.0% | |
AGCCGCAAAAAACAGTTAAA+AGG | + | chr5_4:64648903-64648922 | Msa0864320:CDS | 35.0% | |
! | ACATAACTTTTCCTCTGCTT+CGG | - | chr5_4:64649019-64649038 | None:intergenic | 35.0% |
! | ACATAACTTTTCCTCTGCTT+CGG | - | chr5_4:64649019-64649038 | None:intergenic | 35.0% |
! | AATAATGGCTTTTGACACTC+AGG | - | chr5_4:64649133-64649152 | None:intergenic | 35.0% |
! | TTCCATCTCTTTCCCATTTT+TGG | + | chr5_4:64649168-64649187 | Msa0864320:CDS | 35.0% |
TTCCAAAAATGGGAAAGAGA+TGG | - | chr5_4:64649173-64649192 | None:intergenic | 35.0% | |
ATCTGCCATCGTATACAATT+CGG | + | chr5_4:64649252-64649271 | Msa0864320:CDS | 35.0% | |
TTGTACCGAATTGTATACGA+TGG | - | chr5_4:64649260-64649279 | None:intergenic | 35.0% | |
CAGAAAATGACTTCATTGTC+AGG | + | chr5_4:64649286-64649305 | Msa0864320:CDS | 35.0% | |
GTTTATGTCTAGTTGAGAGT+AGG | + | chr5_4:64649308-64649327 | Msa0864320:CDS | 35.0% | |
!!! | CAAAGATCTCATTTTTTGGC+TGG | - | chr5_4:64649500-64649519 | None:intergenic | 35.0% |
AGAATGATGAACATAAGAGG+AGG | + | chr5_4:64649698-64649717 | Msa0864320:CDS | 35.0% | |
! | ATGAACATAAGAGGAGGTAT+TGG | + | chr5_4:64649704-64649723 | Msa0864320:CDS | 35.0% |
!! | TGAACATAAGAGGAGGTATT+GGG | + | chr5_4:64649705-64649724 | Msa0864320:CDS | 35.0% |
GTCCTGCTAAAAAAAAAGGT+TGG | - | chr5_4:64649895-64649914 | None:intergenic | 35.0% | |
ATGGGTCCTGCTAAAAAAAA+AGG | - | chr5_4:64649899-64649918 | None:intergenic | 35.0% | |
!!! | TTTTTTTTTAGCAGGACCCA+TGG | + | chr5_4:64649898-64649917 | Msa0864320:intron | 35.0% |
CATTTCCTGAAATTTGTCCA+TGG | - | chr5_4:64649918-64649937 | None:intergenic | 35.0% | |
TTGCTCAGCATAGATATCAA+TGG | + | chr5_4:64650094-64650113 | Msa0864320:intron | 35.0% | |
TGCTCAGCATAGATATCAAT+GGG | + | chr5_4:64650095-64650114 | Msa0864320:intron | 35.0% | |
CATCGCTAACTAATTTGACA+GGG | - | chr5_4:64650450-64650469 | None:intergenic | 35.0% | |
TCATCGCTAACTAATTTGAC+AGG | - | chr5_4:64650451-64650470 | None:intergenic | 35.0% | |
CGATGAGCAAAACAAAAACA+TGG | + | chr5_4:64650465-64650484 | Msa0864320:CDS | 35.0% | |
AAAGAAGAGTAAGAAACAGG+AGG | + | chr5_4:64650660-64650679 | Msa0864320:CDS | 35.0% | |
!! | TGTGTTGATCACTTTTAGAG+TGG | - | chr5_4:64650753-64650772 | None:intergenic | 35.0% |
AAGGGATTTATGGATAACCA+TGG | + | chr5_4:64650985-64651004 | Msa0864320:CDS | 35.0% | |
ACTTACTTTGCTTCATTTGG+TGG | - | chr5_4:64651042-64651061 | None:intergenic | 35.0% | |
TGAAAGGTGGATGTAAATGT+TGG | + | chr5_4:64651358-64651377 | Msa0864320:intron | 35.0% | |
AATTGTTGTACGATTGGGAT+GGG | + | chr5_4:64651384-64651403 | Msa0864320:CDS | 35.0% | |
!! | GATTCTGGTAATGGTTGTAA+AGG | - | chr5_4:64651412-64651431 | None:intergenic | 35.0% |
!!! | GTTGTTTTGAAACAGGTTTC+CGG | + | chr5_4:64651547-64651566 | Msa0864320:intron | 35.0% |
TGATCAAGTTTGCATAGTCT+TGG | - | chr5_4:64651602-64651621 | None:intergenic | 35.0% | |
!! | TCAGTTGATAACCTTTGGAA+AGG | + | chr5_4:64651727-64651746 | Msa0864320:CDS | 35.0% |
ATTATGCAAGTTCTCTTGCA+AGG | + | chr5_4:64651887-64651906 | Msa0864320:CDS | 35.0% | |
TCTTACAATTAGGTGTGAAG+AGG | - | chr5_4:64652160-64652179 | None:intergenic | 35.0% | |
ACAATTGATTGATCTGTGGT+TGG | - | chr5_4:64652314-64652333 | None:intergenic | 35.0% | |
TGCTACAATTGATTGATCTG+TGG | - | chr5_4:64652318-64652337 | None:intergenic | 35.0% | |
ATCAATTGTAGCAACCCAAA+TGG | + | chr5_4:64652325-64652344 | Msa0864320:CDS | 35.0% | |
GTATGGGAAACAATATGCAT+TGG | - | chr5_4:64652357-64652376 | None:intergenic | 35.0% | |
TCCCATACTCTGATAATTGT+TGG | + | chr5_4:64652369-64652388 | Msa0864320:CDS | 35.0% | |
CTCCAACAATTATCAGAGTA+TGG | - | chr5_4:64652374-64652393 | None:intergenic | 35.0% | |
AATGATGTGCTTTCATGTTC+GGG | - | chr5_4:64652467-64652486 | None:intergenic | 35.0% | |
CAATGATGTGCTTTCATGTT+CGG | - | chr5_4:64652468-64652487 | None:intergenic | 35.0% | |
TGACTGCTGAAGTTAAATGT+TGG | - | chr5_4:64652554-64652573 | None:intergenic | 35.0% | |
AAAAATTACCATACATCGGC+AGG | - | chr5_4:64652589-64652608 | None:intergenic | 35.0% | |
AAAGAATAGCATGCATTGTC+AGG | - | chr5_4:64653076-64653095 | None:intergenic | 35.0% | |
! | ACTACTTCAAGTGCTTTAAG+TGG | + | chr5_4:64653156-64653175 | Msa0864320:intron | 35.0% |
GGACATAACTGAACAGATAA+AGG | - | chr5_4:64653522-64653541 | None:intergenic | 35.0% | |
TTGAAAGAGAGCTTGTCTTT+AGG | + | chr5_4:64653799-64653818 | Msa0864320:intron | 35.0% | |
TGAAAGAGAGCTTGTCTTTA+GGG | + | chr5_4:64653800-64653819 | Msa0864320:intron | 35.0% | |
TGTTCCATTCAAAGGAAAAC+GGG | - | chr5_4:64654122-64654141 | None:intergenic | 35.0% | |
!!! | CAGATAGCATATTTTGGTAC+CGG | + | chr5_4:64654322-64654341 | Msa0864320:CDS | 35.0% |
!!! | AGATAGCATATTTTGGTACC+GGG | + | chr5_4:64654323-64654342 | Msa0864320:CDS | 35.0% |
!! | AATCATATGAAGAGCACCTA+AGG | - | chr5_4:64654441-64654460 | None:intergenic | 35.0% |
TAATAAGTAGAGCGGTCAAA+TGG | + | chr5_4:64654789-64654808 | Msa0864320:intron | 35.0% | |
ACATGATCCAACCAAAAGTA+TGG | + | chr5_4:64654857-64654876 | Msa0864320:intron | 35.0% | |
! | CATGATCCAACCAAAAGTAT+GGG | + | chr5_4:64654858-64654877 | Msa0864320:intron | 35.0% |
! | CATTATCCCATACTTTTGGT+TGG | - | chr5_4:64654867-64654886 | None:intergenic | 35.0% |
! | CAACCAAAAGTATGGGATAA+TGG | + | chr5_4:64654865-64654884 | Msa0864320:intron | 35.0% |
!! | AAAAGTATGGGATAATGGAC+CGG | + | chr5_4:64654870-64654889 | Msa0864320:intron | 35.0% |
!! | AAATAGATTGGTCTAATGGC+CGG | - | chr5_4:64654892-64654911 | None:intergenic | 35.0% |
!! | AGAGGAGGTTTTGTATTGAA+AGG | + | chr5_4:64654963-64654982 | Msa0864320:intron | 35.0% |
AAAAAAAAGGAAGGAGCAAG+TGG | + | chr5_4:64655057-64655076 | Msa0864320:intron | 35.0% | |
! | ACATTAGGAGGAGAAGATTT+TGG | + | chr5_4:64655093-64655112 | Msa0864320:intron | 35.0% |
TTAGTTCCTCAAAATGAGGA+GGG | - | chr5_4:64655147-64655166 | None:intergenic | 35.0% | |
! | TTTAGTTCCTCAAAATGAGG+AGG | - | chr5_4:64655148-64655167 | None:intergenic | 35.0% |
TTTGGATGTTTAGAAGGGAA+GGG | - | chr5_4:64655367-64655386 | None:intergenic | 35.0% | |
!! | GCTTTGTTTGGATGTTTAGA+AGG | - | chr5_4:64655373-64655392 | None:intergenic | 35.0% |
AAACATCCAAACAAAGCCTT+AGG | + | chr5_4:64655376-64655395 | Msa0864320:intron | 35.0% | |
TACCAATGTAGGTTTGTCAA+TGG | + | chr5_4:64655495-64655514 | Msa0864320:intron | 35.0% | |
TTCCATTGACAAACCTACAT+TGG | - | chr5_4:64655500-64655519 | None:intergenic | 35.0% | |
! | TATTTTGCATCGCAACACAA+CGG | + | chr5_4:64655686-64655705 | Msa0864320:CDS | 35.0% |
ACAATTCAGGCATAGATGTG+AGG | - | chr5_4:64646830-64646849 | None:intergenic | 40.0% | |
!! | CGAAAGGTTCACAGTTTTGT+GGG | - | chr5_4:64646916-64646935 | None:intergenic | 40.0% |
!! | TTGATGGGGCAGGTTTTATA+TGG | + | chr5_4:64647334-64647353 | Msa0864320:intron | 40.0% |
TGGTCCTGTTCAATTTGCAT+TGG | + | chr5_4:64647776-64647795 | Msa0864320:intron | 40.0% | |
TGTGTGTGTGTGTGTGAAAT+TGG | + | chr5_4:64648054-64648073 | Msa0864320:intron | 40.0% | |
TGTGTGTGTGTGAAATTGGT+AGG | + | chr5_4:64648058-64648077 | Msa0864320:intron | 40.0% | |
!! | GACTACATTGGTTCAAGGTT+TGG | + | chr5_4:64648120-64648139 | Msa0864320:intron | 40.0% |
AGAGAGAAAAAGGAAGAGAG+AGG | - | chr5_4:64648464-64648483 | None:intergenic | 40.0% | |
! | AGTGTTGTTGTCATGAGTGT+TGG | - | chr5_4:64649053-64649072 | None:intergenic | 40.0% |
! | CTTTTGACACTCAGGAAACT+TGG | - | chr5_4:64649125-64649144 | None:intergenic | 40.0% |
AAGCCATTATTCGTCGATGA+TGG | + | chr5_4:64649142-64649161 | Msa0864320:CDS | 40.0% | |
TCTCCATCATCGACGAATAA+TGG | - | chr5_4:64649148-64649167 | None:intergenic | 40.0% | |
GATTCAAAGGTTTATCAGGG+TGG | + | chr5_4:64649202-64649221 | Msa0864320:CDS | 40.0% | |
CTAGTTGAGAGTAGGAGAAT+TGG | + | chr5_4:64649316-64649335 | Msa0864320:CDS | 40.0% | |
! | CTAATTCCCCTGACTTTTTG+CGG | - | chr5_4:64649582-64649601 | None:intergenic | 40.0% |
ACGAAGAGACATTACGAGTA+TGG | + | chr5_4:64649644-64649663 | Msa0864320:CDS | 40.0% | |
GATCAAGTGCATACTGTTCA+AGG | + | chr5_4:64649772-64649791 | Msa0864320:CDS | 40.0% | |
ACAGAGCATAGCATACAATG+TGG | - | chr5_4:64649992-64650011 | None:intergenic | 40.0% | |
GTGATAGACGATTCTTACCA+TGG | + | chr5_4:64650251-64650270 | Msa0864320:CDS | 40.0% | |
AGACGATTCTTACCATGGAA+AGG | + | chr5_4:64650256-64650275 | Msa0864320:CDS | 40.0% | |
ATGTGTCTGACCATTTGTCA+AGG | + | chr5_4:64650320-64650339 | Msa0864320:CDS | 40.0% | |
GTGACATAAATGCAGAGCTT+TGG | - | chr5_4:64650414-64650433 | None:intergenic | 40.0% | |
ATAGTTCGTGTTCCATAGAG+AGG | + | chr5_4:64650596-64650615 | Msa0864320:CDS | 40.0% | |
AGAATCTGAGTTCCTCTCTA+TGG | - | chr5_4:64650611-64650630 | None:intergenic | 40.0% | |
ATCATGCGAACTCTGTTGAT+TGG | + | chr5_4:64650776-64650795 | Msa0864320:CDS | 40.0% | |
! | TCATGCGAACTCTGTTGATT+GGG | + | chr5_4:64650777-64650796 | Msa0864320:CDS | 40.0% |
ATATTTGTAGCGTGCACTGA+AGG | + | chr5_4:64650966-64650985 | Msa0864320:intron | 40.0% | |
TATTTGTAGCGTGCACTGAA+GGG | + | chr5_4:64650967-64650986 | Msa0864320:intron | 40.0% | |
TGGACGAATTGTTGTACGAT+TGG | + | chr5_4:64651378-64651397 | Msa0864320:CDS | 40.0% | |
GGACGAATTGTTGTACGATT+GGG | + | chr5_4:64651379-64651398 | Msa0864320:CDS | 40.0% | |
GAATTGTTGTACGATTGGGA+TGG | + | chr5_4:64651383-64651402 | Msa0864320:CDS | 40.0% | |
! | TCGGACAAGCATTGCAATTT+GGG | - | chr5_4:64651849-64651868 | None:intergenic | 40.0% |
! | ATCGGACAAGCATTGCAATT+TGG | - | chr5_4:64651850-64651869 | None:intergenic | 40.0% |
!!! | GATTGATCTGTGGTTGGTTT+TGG | - | chr5_4:64652308-64652327 | None:intergenic | 40.0% |
! | TGCATTGGCATGATCCATTT+GGG | - | chr5_4:64652342-64652361 | None:intergenic | 40.0% |
! | ATGCATTGGCATGATCCATT+TGG | - | chr5_4:64652343-64652362 | None:intergenic | 40.0% |
TGAGAGTGACGAAGATATTG+AGG | + | chr5_4:64652523-64652542 | Msa0864320:CDS | 40.0% | |
! | ATTGTGAAGCATTAACGCCA+TGG | - | chr5_4:64652625-64652644 | None:intergenic | 40.0% |
! | GTGCTTTAAGTGGATGTGTT+TGG | + | chr5_4:64653166-64653185 | Msa0864320:intron | 40.0% |
!!! | GCCTGAAAACTGTTGCTTTT+TGG | + | chr5_4:64653224-64653243 | Msa0864320:intron | 40.0% |
! | GCCAAAAAGCAACAGTTTTC+AGG | - | chr5_4:64653228-64653247 | None:intergenic | 40.0% |
TCTGTTCAGTTATGTCCTCA+CGG | + | chr5_4:64653525-64653544 | Msa0864320:intron | 40.0% | |
CCATACAACCAGAAGATAAG+GGG | - | chr5_4:64653689-64653708 | None:intergenic | 40.0% | |
GCCATACAACCAGAAGATAA+GGG | - | chr5_4:64653690-64653709 | None:intergenic | 40.0% | |
AGCCATACAACCAGAAGATA+AGG | - | chr5_4:64653691-64653710 | None:intergenic | 40.0% | |
!! | ATAAACACAGAAGGAGTACC+TGG | - | chr5_4:64653715-64653734 | None:intergenic | 40.0% |
TAAAGCCGATCTAGAAAGCT+CGG | + | chr5_4:64653913-64653932 | Msa0864320:intron | 40.0% | |
AGTCAGACTGAAACAGTTCT+TGG | + | chr5_4:64653974-64653993 | Msa0864320:CDS | 40.0% | |
AACAGTTCTTGGAACACTTC+TGG | + | chr5_4:64653985-64654004 | Msa0864320:CDS | 40.0% | |
! | GGTCCATTATCCCATACTTT+TGG | - | chr5_4:64654871-64654890 | None:intergenic | 40.0% |
!! | AGTTCTGAAGGCACTTGTTA+AGG | + | chr5_4:64654931-64654950 | Msa0864320:intron | 40.0% |
!!! | GGGGTGGGTTTTGAAAAAAA+AGG | + | chr5_4:64655044-64655063 | Msa0864320:intron | 40.0% |
! | TTAGGAGGAGAAGATTTTGG+AGG | + | chr5_4:64655096-64655115 | Msa0864320:intron | 40.0% |
! | TAGGAGGAGAAGATTTTGGA+GGG | + | chr5_4:64655097-64655116 | Msa0864320:intron | 40.0% |
GTTTGGATGTTTAGAAGGGA+AGG | - | chr5_4:64655368-64655387 | None:intergenic | 40.0% | |
!! | AAGTGTCCTAAGGCTTTGTT+TGG | - | chr5_4:64655385-64655404 | None:intergenic | 40.0% |
! | GCGAAAGGTTCACAGTTTTG+TGG | - | chr5_4:64646917-64646936 | None:intergenic | 45.0% |
! | GCTGCGGTGAGTATTTCTTT+TGG | - | chr5_4:64648214-64648233 | None:intergenic | 45.0% |
GAAGCTCAATTGGTGAGTTG+AGG | - | chr5_4:64648335-64648354 | None:intergenic | 45.0% | |
CGCTCTTTCTTATCCATGCA+AGG | + | chr5_4:64648620-64648639 | Msa0864320:intron | 45.0% | |
GGATATGGAGACACCACTTT+AGG | - | chr5_4:64648941-64648960 | None:intergenic | 45.0% | |
!!! | TTTTGGAGTGTCGTTGCTTC+CGG | - | chr5_4:64648987-64649006 | None:intergenic | 45.0% |
! | TGCTTCGGAGTTGAAGGTTT+TGG | - | chr5_4:64649004-64649023 | None:intergenic | 45.0% |
!! | GTTGTTGTCATGAGTGTTGG+CGG | - | chr5_4:64649050-64649069 | None:intergenic | 45.0% |
! | TGCTTCGGAGTTGAAGGTTT+TGG | - | chr5_4:64649004-64649023 | None:intergenic | 45.0% |
! | TGGACACAATTTTGGGCAGA+AGG | + | chr5_4:64649463-64649482 | Msa0864320:CDS | 45.0% |
AGAGATGTCCGCAAAAAGTC+AGG | + | chr5_4:64649571-64649590 | Msa0864320:CDS | 45.0% | |
GAGATGTCCGCAAAAAGTCA+GGG | + | chr5_4:64649572-64649591 | Msa0864320:CDS | 45.0% | |
AGATGTCCGCAAAAAGTCAG+GGG | + | chr5_4:64649573-64649592 | Msa0864320:CDS | 45.0% | |
AGGACCCATGGACAAATTTC+AGG | + | chr5_4:64649910-64649929 | Msa0864320:intron | 45.0% | |
TATGCTATGCTCTGTTCGAC+TGG | + | chr5_4:64649997-64650016 | Msa0864320:intron | 45.0% | |
! | ACCATGGAAAGGCTCAGTTT+TGG | + | chr5_4:64650267-64650286 | Msa0864320:CDS | 45.0% |
TCCAAAACTGAGCCTTTCCA+TGG | - | chr5_4:64650271-64650290 | None:intergenic | 45.0% | |
!!! | AGGCTCAGTTTTGGATTCTG+TGG | + | chr5_4:64650276-64650295 | Msa0864320:CDS | 45.0% |
!!! | GGCTCAGTTTTGGATTCTGT+GGG | + | chr5_4:64650277-64650296 | Msa0864320:CDS | 45.0% |
!!! | TCAGTTTTGGATTCTGTGGG+TGG | + | chr5_4:64650280-64650299 | Msa0864320:CDS | 45.0% |
! | CATTTATGTCACTTGCTGCG+AGG | + | chr5_4:64650422-64650441 | Msa0864320:CDS | 45.0% |
GGAACTCAGATTCTCGTAGT+AGG | + | chr5_4:64650617-64650636 | Msa0864320:CDS | 45.0% | |
ACTCAGATTCTCGTAGTAGG+AGG | + | chr5_4:64650620-64650639 | Msa0864320:CDS | 45.0% | |
GCTGAAGCTATTGAAAAGCG+TGG | + | chr5_4:64650832-64650851 | Msa0864320:CDS | 45.0% | |
! | TGGACTGGGTTTGAAAAGTG+TGG | + | chr5_4:64651194-64651213 | Msa0864320:CDS | 45.0% |
TTGCAATGCTTGTCCGATGA+AGG | + | chr5_4:64651852-64651871 | Msa0864320:CDS | 45.0% | |
!!! | TGTGGTTGGTTTTGGTGGTA+AGG | - | chr5_4:64652300-64652319 | None:intergenic | 45.0% |
!!! | TGATCTGTGGTTGGTTTTGG+TGG | - | chr5_4:64652305-64652324 | None:intergenic | 45.0% |
GATGCGGGCATCTCAATTAT+AGG | - | chr5_4:64652443-64652462 | None:intergenic | 45.0% | |
TAATCACCCTCTTCTAGCAG+AGG | + | chr5_4:64653549-64653568 | Msa0864320:CDS | 45.0% | |
GATGGATCATCATGTTCTCG+TGG | - | chr5_4:64653667-64653686 | None:intergenic | 45.0% | |
TGATCCATCCCCTTATCTTC+TGG | + | chr5_4:64653678-64653697 | Msa0864320:CDS | 45.0% | |
ACAACCAGAAGATAAGGGGA+TGG | - | chr5_4:64653685-64653704 | None:intergenic | 45.0% | |
! | CCCCTTATCTTCTGGTTGTA+TGG | + | chr5_4:64653686-64653705 | Msa0864320:CDS | 45.0% |
AAAGCCGATCTAGAAAGCTC+GGG | + | chr5_4:64653914-64653933 | Msa0864320:intron | 45.0% | |
!! | AAGCAAGACTGACTTGCATG+AGG | + | chr5_4:64653943-64653962 | Msa0864320:CDS | 45.0% |
! | AGAGCCCGTTTTCCTTTGAA+TGG | + | chr5_4:64654115-64654134 | Msa0864320:CDS | 45.0% |
!! | TCTCGTCATTGATGATGTCC+CGG | - | chr5_4:64654344-64654363 | None:intergenic | 45.0% |
TAGAGCGGTCAAATGGATCA+AGG | + | chr5_4:64654796-64654815 | Msa0864320:intron | 45.0% | |
!! | GATAGCCTTGTTTGCGAGTT+TGG | + | chr5_4:64655010-64655029 | Msa0864320:intron | 45.0% |
TTTAGAAGGGAAGGGAAGAG+AGG | - | chr5_4:64655359-64655378 | None:intergenic | 45.0% | |
!!! | AAATTTTTATAATAATAAAG+TGG | + | chr5_4:64647524-64647543 | Msa0864320:intron | 5.0% |
!! | AAAAAAAAAAAAAAACTTTA+CGG | - | chr5_4:64651468-64651487 | None:intergenic | 5.0% |
!! | TAAATAAATACAATAAAAAA+GGG | - | chr5_4:64653110-64653129 | None:intergenic | 5.0% |
!! | ATAAATAAATACAATAAAAA+AGG | - | chr5_4:64653111-64653130 | None:intergenic | 5.0% |
!!! | TTTTATTTGTAAAAAAAATT+GGG | - | chr5_4:64654043-64654062 | None:intergenic | 5.0% |
!!! | AATTTTTTTTACAAATAAAA+GGG | + | chr5_4:64654043-64654062 | Msa0864320:intron | 5.0% |
!!! | ATTTTAAGATAAATAAATAA+CGG | + | chr5_4:64654494-64654513 | Msa0864320:intron | 5.0% |
!! | AATAAATATTAAATAGTAAA+TGG | - | chr5_4:64654638-64654657 | None:intergenic | 5.0% |
CGAGCTGATGTTTCGTCTCA+AGG | + | chr5_4:64646779-64646798 | Msa0864320:CDS | 50.0% | |
TAGATGTGAGGCGAGGCATA+GGG | - | chr5_4:64646818-64646837 | None:intergenic | 50.0% | |
ATAGATGTGAGGCGAGGCAT+AGG | - | chr5_4:64646819-64646838 | None:intergenic | 50.0% | |
GAACCACATGCTTCACACGT+TGG | + | chr5_4:64646973-64646992 | Msa0864320:intron | 50.0% | |
CTTCCAACGTGTGAAGCATG+TGG | - | chr5_4:64646979-64646998 | None:intergenic | 50.0% | |
CACTAATCACTTGATGGGGC+AGG | + | chr5_4:64647324-64647343 | Msa0864320:intron | 50.0% | |
!! | TTTGGAGTGTCGTTGCTTCC+GGG | - | chr5_4:64648986-64649005 | None:intergenic | 50.0% |
AACCTTCAACTCCGAAGCAG+AGG | + | chr5_4:64649005-64649024 | Msa0864320:CDS | 50.0% | |
TTCCTCTGCTTCGGAGTTGA+AGG | - | chr5_4:64649010-64649029 | None:intergenic | 50.0% | |
AACCTTCAACTCCGAAGCAG+AGG | + | chr5_4:64649005-64649024 | Msa0864320:CDS | 50.0% | |
TTCCTCTGCTTCGGAGTTGA+AGG | - | chr5_4:64649010-64649029 | None:intergenic | 50.0% | |
ATCTCTGGCCCTTTGCAAAC+GGG | - | chr5_4:64649414-64649433 | None:intergenic | 50.0% | |
GATCTCTGGCCCTTTGCAAA+CGG | - | chr5_4:64649415-64649434 | None:intergenic | 50.0% | |
GCGTGCACTGAAGGGATTTA+TGG | + | chr5_4:64650975-64650994 | Msa0864320:intron | 50.0% | |
CTTTCATGTTCGGGTGATGC+GGG | - | chr5_4:64652458-64652477 | None:intergenic | 50.0% | |
GCTTTCATGTTCGGGTGATG+CGG | - | chr5_4:64652459-64652478 | None:intergenic | 50.0% | |
TCATCATGCCTGCCGATGTA+TGG | + | chr5_4:64652578-64652597 | Msa0864320:CDS | 50.0% | |
GAAGAGGGTGATTATCCGTG+AGG | - | chr5_4:64653543-64653562 | None:intergenic | 50.0% | |
CACCTACCTCTGCTAGAAGA+GGG | - | chr5_4:64653558-64653577 | None:intergenic | 50.0% | |
ACACCTACCTCTGCTAGAAG+AGG | - | chr5_4:64653559-64653578 | None:intergenic | 50.0% | |
GGATCATCATGTTCTCGTGG+AGG | - | chr5_4:64653664-64653683 | None:intergenic | 50.0% | |
TTCGCCCGAGCTTTCTAGAT+CGG | - | chr5_4:64653921-64653940 | None:intergenic | 50.0% | |
! | AACGGGCTCTCATTGCAGTT+CGG | - | chr5_4:64654105-64654124 | None:intergenic | 50.0% |
GGGACATCATCAATGACGAG+AGG | + | chr5_4:64654343-64654362 | Msa0864320:CDS | 50.0% | |
!! | AGCCTTGTTTGCGAGTTTGG+AGG | + | chr5_4:64655013-64655032 | Msa0864320:intron | 50.0% |
!! | GCCTTGTTTGCGAGTTTGGA+GGG | + | chr5_4:64655014-64655033 | Msa0864320:intron | 50.0% |
! | CCTTGTTTGCGAGTTTGGAG+GGG | + | chr5_4:64655015-64655034 | Msa0864320:intron | 50.0% |
! | ACACAGCCCTCCTCATTTTG+AGG | + | chr5_4:64655138-64655157 | Msa0864320:intron | 50.0% |
GCAACACAACGGACAGACTT+AGG | + | chr5_4:64655697-64655716 | Msa0864320:CDS | 50.0% | |
TCAGGCATAGATGTGAGGCG+AGG | - | chr5_4:64646825-64646844 | None:intergenic | 55.0% | |
AAGTTACCCACGCACAGCTG+CGG | - | chr5_4:64648230-64648249 | None:intergenic | 55.0% | |
ACTCTTGCCCCCGTTTGCAA+AGG | + | chr5_4:64649402-64649421 | Msa0864320:CDS | 55.0% | |
CTCTTGCCCCCGTTTGCAAA+GGG | + | chr5_4:64649403-64649422 | Msa0864320:CDS | 55.0% | |
TCTCTGGCCCTTTGCAAACG+GGG | - | chr5_4:64649413-64649432 | None:intergenic | 55.0% | |
GCTATGCTCTGTTCGACTGG+TGG | + | chr5_4:64650000-64650019 | Msa0864320:intron | 55.0% | |
ATGCTCTGTTCGACTGGTGG+TGG | + | chr5_4:64650003-64650022 | Msa0864320:intron | 55.0% | |
CACCCTCTTCTAGCAGAGGT+AGG | + | chr5_4:64653553-64653572 | Msa0864320:intron | 55.0% | |
! | CTTCTGGTTGTATGGCTGCC+AGG | + | chr5_4:64653694-64653713 | Msa0864320:CDS | 55.0% |
GCTCTCATTGCAGTTCGGAC+TGG | - | chr5_4:64654100-64654119 | None:intergenic | 55.0% | |
CCCCTCCAAACTCGCAAACA+AGG | - | chr5_4:64655018-64655037 | None:intergenic | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+AGG | + | chr5_4:64655019-64655038 | Msa0864320:intron | 55.0% | |
CGAGTTTGGAGGGGAAGGAA+GGG | + | chr5_4:64655024-64655043 | Msa0864320:intron | 55.0% | |
GAGTTTGGAGGGGAAGGAAG+GGG | + | chr5_4:64655025-64655044 | Msa0864320:intron | 55.0% | |
! | GAAGGGAAGAGAGGCTTTGG+GGG | - | chr5_4:64655350-64655369 | None:intergenic | 55.0% |
GGAAGGGAAGAGAGGCTTTG+GGG | - | chr5_4:64655351-64655370 | None:intergenic | 55.0% | |
GGGAAGGGAAGAGAGGCTTT+GGG | - | chr5_4:64655352-64655371 | None:intergenic | 55.0% | |
AGGGAAGGGAAGAGAGGCTT+TGG | - | chr5_4:64655353-64655372 | None:intergenic | 55.0% | |
TGTGAGGCGAGGCATAGGGA+GGG | - | chr5_4:64646814-64646833 | None:intergenic | 60.0% | |
ATGTGAGGCGAGGCATAGGG+AGG | - | chr5_4:64646815-64646834 | None:intergenic | 60.0% | |
ATACTCACCGCAGCTGTGCG+TGG | + | chr5_4:64648220-64648239 | Msa0864320:intron | 60.0% | |
TACTCACCGCAGCTGTGCGT+GGG | + | chr5_4:64648221-64648240 | Msa0864320:intron | 60.0% | |
! | GAGTGTCGTTGCTTCCGGGA+TGG | - | chr5_4:64648982-64649001 | None:intergenic | 60.0% |
CTCTGGCCCTTTGCAAACGG+GGG | - | chr5_4:64649412-64649431 | None:intergenic | 60.0% | |
GCGAGTTTGGAGGGGAAGGA+AGG | + | chr5_4:64655023-64655042 | Msa0864320:intron | 60.0% | |
TTTGGAGGGGAAGGAAGGGG+TGG | + | chr5_4:64655028-64655047 | Msa0864320:intron | 60.0% | |
TTGGAGGGGAAGGAAGGGGT+GGG | + | chr5_4:64655029-64655048 | Msa0864320:intron | 60.0% | |
!! | GGGAAGAGAGGCTTTGGGGG+TGG | - | chr5_4:64655347-64655366 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 64646737 | 64655740 | 64646737 | ID=Msa0864320;Name=Msa0864320 |
chr5_4 | mRNA | 64646737 | 64655740 | 64646737 | ID=Msa0864320-mRNA-1;Parent=Msa0864320;Name=Msa0864320-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|0.29|0.16|0.94|1|1|18|0|988 |
chr5_4 | exon | 64646737 | 64646800 | 64646737 | ID=Msa0864320-mRNA-1:exon:20335;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64648858 | 64649793 | 64648858 | ID=Msa0864320-mRNA-1:exon:20336;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64650251 | 64650341 | 64650251 | ID=Msa0864320-mRNA-1:exon:20337;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64650417 | 64650885 | 64650417 | ID=Msa0864320-mRNA-1:exon:20338;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64650976 | 64651055 | 64650976 | ID=Msa0864320-mRNA-1:exon:20339;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64651173 | 64651257 | 64651173 | ID=Msa0864320-mRNA-1:exon:20340;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64651364 | 64651455 | 64651364 | ID=Msa0864320-mRNA-1:exon:20341;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64651562 | 64651630 | 64651562 | ID=Msa0864320-mRNA-1:exon:20342;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64651712 | 64651748 | 64651712 | ID=Msa0864320-mRNA-1:exon:20343;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64651826 | 64651908 | 64651826 | ID=Msa0864320-mRNA-1:exon:20344;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64652286 | 64652729 | 64652286 | ID=Msa0864320-mRNA-1:exon:20345;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64653534 | 64653570 | 64653534 | ID=Msa0864320-mRNA-1:exon:20346;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64653658 | 64653715 | 64653658 | ID=Msa0864320-mRNA-1:exon:20347;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64653918 | 64654006 | 64653918 | ID=Msa0864320-mRNA-1:exon:20348;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64654094 | 64654159 | 64654094 | ID=Msa0864320-mRNA-1:exon:20349;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64654250 | 64654364 | 64654250 | ID=Msa0864320-mRNA-1:exon:20350;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64655506 | 64655544 | 64655506 | ID=Msa0864320-mRNA-1:exon:20351;Parent=Msa0864320-mRNA-1 |
chr5_4 | exon | 64655628 | 64655740 | 64655628 | ID=Msa0864320-mRNA-1:exon:20352;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64646737 | 64646800 | 64646737 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64648858 | 64649793 | 64648858 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64650251 | 64650341 | 64650251 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64650417 | 64650885 | 64650417 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64650976 | 64651055 | 64650976 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64651173 | 64651257 | 64651173 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64651364 | 64651455 | 64651364 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64651562 | 64651630 | 64651562 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64651712 | 64651748 | 64651712 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64651826 | 64651908 | 64651826 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64652286 | 64652729 | 64652286 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64653534 | 64653570 | 64653534 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64653658 | 64653715 | 64653658 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64653918 | 64654006 | 64653918 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64654094 | 64654159 | 64654094 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64654250 | 64654364 | 64654250 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64655506 | 64655544 | 64655506 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
chr5_4 | CDS | 64655628 | 64655740 | 64655628 | ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1 |
Gene Sequence |
Protein sequence |