AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0864320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864320 MtrunA17_Chr5g0446571 89.391 509 28 3 167 674 1 484 0.0 860
Msa0864320 MtrunA17_Chr2g0279191 71.838 593 131 5 39 629 2 560 0.0 820
Msa0864320 MtrunA17_Chr1g0198151 47.417 542 234 11 464 974 1251 1772 4.58e-156 504
Msa0864320 MtrunA17_Chr1g0198151 43.529 170 78 3 241 392 713 882 5.69e-26 115
Msa0864320 MtrunA17_Chr1g0179341 46.377 552 248 10 463 974 1606 2149 5.52e-150 492
Msa0864320 MtrunA17_Chr1g0179341 60.748 107 37 2 274 377 1162 1266 8.52e-20 95.9
Msa0864320 MtrunA17_Chr7g0265771 43.696 579 248 10 468 974 1180 1752 1.70e-145 475
Msa0864320 MtrunA17_Chr7g0265771 46.835 158 64 6 254 393 673 828 1.03e-22 105
Msa0864320 MtrunA17_Chr5g0446581 78.090 178 12 6 689 849 1 168 8.26e-77 249
Msa0864320 MtrunA17_Chr5g0446591 91.803 61 5 0 879 939 4 64 8.45e-34 124
Msa0864320 MtrunA17_Chr2g0279201 81.967 61 11 0 879 939 4 64 9.24e-31 115
Msa0864320 MtrunA17_Chr2g0320931 60.606 99 39 0 337 435 2 100 2.45e-28 110
Msa0864320 MtrunA17_Chr4g0059441 31.707 123 84 0 491 613 115 237 1.07e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864320 AT2G36490.1 44.462 641 291 15 365 974 773 1379 1.62e-154 493
Msa0864320 AT2G36490.1 58.182 110 41 2 274 379 522 630 4.26e-23 107
Msa0864320 AT5G04560.1 46.898 548 240 10 463 974 1186 1718 5.61e-152 492
Msa0864320 AT5G04560.1 49.359 156 65 5 251 394 666 819 9.01e-28 122
Msa0864320 AT5G04560.3 46.898 548 240 10 463 974 1186 1718 5.61e-152 492
Msa0864320 AT5G04560.3 49.359 156 65 5 251 394 666 819 9.01e-28 122
Msa0864320 AT5G04560.2 46.898 548 240 10 463 974 1444 1976 2.81e-150 491
Msa0864320 AT5G04560.2 49.359 156 65 5 251 394 924 1077 1.19e-27 122
Msa0864320 AT4G34060.5 36.748 781 402 18 231 974 107 832 2.81e-137 433
Msa0864320 AT4G34060.4 36.748 781 402 18 231 974 244 969 1.98e-136 435
Msa0864320 AT4G34060.1 36.748 781 402 18 231 974 303 1028 6.40e-136 435
Msa0864320 AT4G34060.3 36.748 781 402 18 231 974 364 1089 2.57e-135 435
Msa0864320 AT3G10010.1 42.831 551 259 8 463 974 785 1318 4.32e-132 431
Msa0864320 AT3G10010.1 54.369 103 44 1 278 377 495 597 1.21e-13 76.3
Msa0864320 AT3G10010.2 42.831 551 259 8 463 974 785 1318 4.32e-132 431
Msa0864320 AT3G10010.2 54.369 103 44 1 278 377 495 597 1.21e-13 76.3
Msa0864320 AT4G34060.2 37.058 707 353 18 231 900 303 954 1.32e-120 392
Msa0864320 AT3G47830.1 31.707 123 84 0 491 613 128 250 3.59e-12 68.9

Find 150 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATGTTGGACACAATTT+TGG 0.108422 5_4:+64649455 Msa0864320:CDS
TTCTTTAATTTCTCTGGATA+TGG 0.171730 5_4:-64648953 None:intergenic
CAAAGATTCAAAGGTTTATC+AGG 0.181892 5_4:+64649198 Msa0864320:CDS
ATCGGACAAGCATTGCAATT+TGG 0.190300 5_4:-64651847 None:intergenic
GCTGATCATTAACATCATTT+TGG 0.207758 5_4:-64648883 None:intergenic
TACACTTACTTTGCTTCATT+TGG 0.238782 5_4:-64651042 None:intergenic
CTCCAACAATTATCAGAGTA+TGG 0.241689 5_4:-64652371 None:intergenic
CAATTAATGTTCCTAGAAAA+TGG 0.251519 5_4:+64654281 Msa0864320:CDS
AAGAAACAGATAGCATATTT+TGG 0.258696 5_4:+64654316 Msa0864320:CDS
TGCTTCGGAGTTGAAGGTTT+TGG 0.258889 5_4:-64649001 None:intergenic
TGCTTCGGAGTTGAAGGTTT+TGG 0.258889 5_4:-64649073 None:intergenic
TCAAAATTCAACAATATCTT+TGG 0.264764 5_4:+64651576 Msa0864320:CDS
CACTAGGGTCATTAAATAAA+AGG 0.265368 5_4:+64648852 Msa0864320:intron
TTATGTATTTGAATTGATTC+TGG 0.265653 5_4:-64651424 None:intergenic
CATAATTGCTTATAAAATTC+AGG 0.270783 5_4:+64650864 Msa0864320:CDS
TGGAATTTCTTTAATTTCTC+TGG 0.287645 5_4:-64648959 None:intergenic
TCGGACAAGCATTGCAATTT+GGG 0.288104 5_4:-64651846 None:intergenic
CCCCTTATCTTCTGGTTGTA+TGG 0.291113 5_4:+64653686 Msa0864320:CDS
ATCTCTGGCCCTTTGCAAAC+GGG 0.302398 5_4:-64649411 None:intergenic
GCGTGCACTGAAGGGATTTA+TGG 0.307586 5_4:+64650975 Msa0864320:intron
GATTGATCTGTGGTTGGTTT+TGG 0.308599 5_4:-64652305 None:intergenic
TAGAAGAGAAAGAATAAGTT+TGG 0.312327 5_4:+64649375 Msa0864320:CDS
AAGAAAACTCTACCATAAAA+TGG 0.317142 5_4:+64649735 Msa0864320:CDS
CATTATCAGTTGATAACCTT+TGG 0.322958 5_4:+64651722 Msa0864320:CDS
GGATATGGAGACACCACTTT+AGG 0.331042 5_4:-64648938 None:intergenic
AAATGACTGTTTGTAGCATT+TGG 0.331522 5_4:-64652662 None:intergenic
ATGCATTGGCATGATCCATT+TGG 0.338385 5_4:-64652340 None:intergenic
TCTCCATCATCGACGAATAA+TGG 0.350818 5_4:-64649145 None:intergenic
AACAGTTCTTGGAACACTTC+TGG 0.355090 5_4:+64653985 Msa0864320:CDS
TATACTTGAAAAGAAAATAT+TGG 0.355229 5_4:+64650690 Msa0864320:CDS
TCCCATACTCTGATAATTGT+TGG 0.366920 5_4:+64652369 Msa0864320:CDS
GATGCGGGCATCTCAATTAT+AGG 0.369192 5_4:-64652440 None:intergenic
ATGTTCCTAGAAAATGGATA+TGG 0.370059 5_4:+64654287 Msa0864320:CDS
GATCTCTGGCCCTTTGCAAA+CGG 0.370152 5_4:-64649412 None:intergenic
TAAATCACTTATAACTCATT+TGG 0.376332 5_4:-64655733 None:intergenic
CAATGATGTGCTTTCATGTT+CGG 0.379965 5_4:-64652465 None:intergenic
AGAATCTGAGTTCCTCTCTA+TGG 0.380275 5_4:-64650608 None:intergenic
TTCCTCTGCTTCGGAGTTGA+AGG 0.382168 5_4:-64649007 None:intergenic
TTCCTCTGCTTCGGAGTTGA+AGG 0.382168 5_4:-64649079 None:intergenic
TGATCCATCCCCTTATCTTC+TGG 0.382226 5_4:+64653678 Msa0864320:CDS
AATTTCTTTGTCATCAACTT+TGG 0.390007 5_4:-64650569 None:intergenic
TTTGGAGTGTCGTTGCTTCC+GGG 0.390139 5_4:-64648983 None:intergenic
ACTTACTTTGCTTCATTTGG+TGG 0.393936 5_4:-64651039 None:intergenic
ACCATGGAAAGGCTCAGTTT+TGG 0.397302 5_4:+64650267 Msa0864320:CDS
AGTCAGACTGAAACAGTTCT+TGG 0.399032 5_4:+64653974 Msa0864320:CDS
ACGAAGAGACATTACGAGTA+TGG 0.400107 5_4:+64649644 Msa0864320:CDS
CTTCTGGTTGTATGGCTGCC+AGG 0.401721 5_4:+64653694 Msa0864320:CDS
TTTAACTTTACCTTGACAAA+TGG 0.410634 5_4:-64650330 None:intergenic
CAGAAAATGACTTCATTGTC+AGG 0.411077 5_4:+64649286 Msa0864320:CDS
GGAAAAGAAAATGCAACATT+GGG 0.412481 5_4:+64650711 Msa0864320:CDS
GATCAAGTGCATACTGTTCA+AGG 0.418609 5_4:+64649772 Msa0864320:CDS
TGCATTGGCATGATCCATTT+GGG 0.421828 5_4:-64652339 None:intergenic
CTAGTTGAGAGTAGGAGAAT+TGG 0.424923 5_4:+64649316 Msa0864320:CDS
ATCATGCGAACTCTGTTGAT+TGG 0.437720 5_4:+64650776 Msa0864320:CDS
GATTCTGGTAATGGTTGTAA+AGG 0.445716 5_4:-64651409 None:intergenic
ATTTGAATTGATTCTGGTAA+TGG 0.446941 5_4:-64651418 None:intergenic
ATTCTGGTAATGGTTGTAAA+GGG 0.447281 5_4:-64651408 None:intergenic
TGAACATAAGAGGAGGTATT+GGG 0.450907 5_4:+64649705 Msa0864320:CDS
ATGAACATAAGAGGAGGTAT+TGG 0.451692 5_4:+64649704 Msa0864320:CDS
GCCATACAACCAGAAGATAA+GGG 0.455483 5_4:-64653687 None:intergenic
TCATCATGCCTGCCGATGTA+TGG 0.460052 5_4:+64652578 Msa0864320:CDS
ATGTTCCATTCAAAGGAAAA+CGG 0.464971 5_4:-64654120 None:intergenic
AAAATAGATGATATAGGTCT+TGG 0.465467 5_4:-64655669 None:intergenic
ATCAATTGTAGCAACCCAAA+TGG 0.468364 5_4:+64652325 Msa0864320:CDS
TGGAAAAGAAAATGCAACAT+TGG 0.470264 5_4:+64650710 Msa0864320:CDS
ATTCTAAATTCATGCTTCCA+TGG 0.470972 5_4:-64651002 None:intergenic
TCATCGCTAACTAATTTGAC+AGG 0.475212 5_4:-64650448 None:intergenic
GGAACTCAGATTCTCGTAGT+AGG 0.476062 5_4:+64650617 Msa0864320:CDS
ATCTGCCATCGTATACAATT+CGG 0.478217 5_4:+64649252 Msa0864320:CDS
TGAAAGTATGTTCCATTCAA+AGG 0.479284 5_4:-64654127 None:intergenic
TGTTCCATTCAAAGGAAAAC+GGG 0.480045 5_4:-64654119 None:intergenic
ATGGAAGCATGAATTTAGAA+TGG 0.481227 5_4:+64651004 Msa0864320:CDS
CACTCTCATAAGTATAATCA+TGG 0.482577 5_4:-64652508 None:intergenic
AACGGGCTCTCATTGCAGTT+CGG 0.484773 5_4:-64654102 None:intergenic
GCAACACAACGGACAGACTT+AGG 0.485288 5_4:+64655697 Msa0864320:CDS
TACCAATGTAGGTTTGTCAA+TGG 0.485334 5_4:+64655495 Msa0864320:intron
CTTTCATGTTCGGGTGATGC+GGG 0.485777 5_4:-64652455 None:intergenic
TATTTACATTCGTCCTTCAT+CGG 0.488396 5_4:-64651865 None:intergenic
AGCCATACAACCAGAAGATA+AGG 0.488404 5_4:-64653688 None:intergenic
GGAATATTTCAAAGATTCAA+AGG 0.489974 5_4:+64649189 Msa0864320:CDS
TGATCAAGTTTGCATAGTCT+TGG 0.495087 5_4:-64651599 None:intergenic
ATATTTGTAGCGTGCACTGA+AGG 0.495187 5_4:+64650966 Msa0864320:intron
AATGATGTGCTTTCATGTTC+GGG 0.496888 5_4:-64652464 None:intergenic
AAGCCATTATTCGTCGATGA+TGG 0.498412 5_4:+64649142 Msa0864320:CDS
GGACGAATTGTTGTACGATT+GGG 0.499702 5_4:+64651379 Msa0864320:CDS
AAGAGAATGATGAACATAAG+AGG 0.503284 5_4:+64649695 Msa0864320:CDS
TTCGCCCGAGCTTTCTAGAT+CGG 0.507119 5_4:-64653918 None:intergenic
CGAGCTGATGTTTCGTCTCA+AGG 0.507196 5_4:+64646779 Msa0864320:CDS
TCTCTGGCCCTTTGCAAACG+GGG 0.511909 5_4:-64649410 None:intergenic
GAGTGTCGTTGCTTCCGGGA+TGG 0.513703 5_4:-64648979 None:intergenic
TCATGCGAACTCTGTTGATT+GGG 0.517031 5_4:+64650777 Msa0864320:CDS
TTGCAATGCTTGTCCGATGA+AGG 0.517404 5_4:+64651852 Msa0864320:CDS
GCTCTCATTGCAGTTCGGAC+TGG 0.517673 5_4:-64654097 None:intergenic
AACATACTTTCAAGTTAATG+AGG 0.517883 5_4:+64654138 Msa0864320:CDS
AGTGTTGTTGTCATGAGTGT+TGG 0.520884 5_4:-64649050 None:intergenic
ACAATTGATTGATCTGTGGT+TGG 0.524864 5_4:-64652311 None:intergenic
GTTAATATGTACCTTTCCAA+AGG 0.526832 5_4:-64651738 None:intergenic
AAAGATTCAAAGGTTTATCA+GGG 0.528203 5_4:+64649199 Msa0864320:CDS
GAAGAAATATCAACCTAAAG+TGG 0.530064 5_4:+64648925 Msa0864320:CDS
TGACTGCTGAAGTTAAATGT+TGG 0.536681 5_4:-64652551 None:intergenic
TGGACGAATTGTTGTACGAT+TGG 0.537128 5_4:+64651378 Msa0864320:CDS
TAAAGCCGATCTAGAAAGCT+CGG 0.538043 5_4:+64653913 Msa0864320:intron
GTTTATGTCTAGTTGAGAGT+AGG 0.548399 5_4:+64649308 Msa0864320:CDS
TGGACTGGGTTTGAAAAGTG+TGG 0.550538 5_4:+64651194 Msa0864320:CDS
TGAAAGGTGGATGTAAATGT+TGG 0.551551 5_4:+64651358 Msa0864320:intron
TGAGAGTGACGAAGATATTG+AGG 0.552359 5_4:+64652523 Msa0864320:CDS
TCAGTTGATAACCTTTGGAA+AGG 0.560599 5_4:+64651727 Msa0864320:CDS
AATTGTTGTACGATTGGGAT+GGG 0.560991 5_4:+64651384 Msa0864320:CDS
TATTTGTAGCGTGCACTGAA+GGG 0.561768 5_4:+64650967 Msa0864320:intron
TGCTACAATTGATTGATCTG+TGG 0.563076 5_4:-64652315 None:intergenic
TCCAACAATTATCAGAGTAT+GGG 0.563545 5_4:-64652370 None:intergenic
CTCTGGCCCTTTGCAAACGG+GGG 0.566090 5_4:-64649409 None:intergenic
ATTATGCAAGTTCTCTTGCA+AGG 0.566239 5_4:+64651887 Msa0864320:CDS
CGATGCAAAATAGATGATAT+AGG 0.570163 5_4:-64655675 None:intergenic
GTTGTTGTCATGAGTGTTGG+CGG 0.571107 5_4:-64649047 None:intergenic
TCCAAAACTGAGCCTTTCCA+TGG 0.572193 5_4:-64650268 None:intergenic
AACCTTCAACTCCGAAGCAG+AGG 0.576298 5_4:+64649005 Msa0864320:CDS
AACCTTCAACTCCGAAGCAG+AGG 0.576298 5_4:+64649077 Msa0864320:CDS
TCTCGTCATTGATGATGTCC+CGG 0.576823 5_4:-64654341 None:intergenic
GATTCAAAGGTTTATCAGGG+TGG 0.578189 5_4:+64649202 Msa0864320:CDS
GTATGGGAAACAATATGCAT+TGG 0.583379 5_4:-64652354 None:intergenic
TCTGTTCAGTTATGTCCTCA+CGG 0.583444 5_4:+64653525 Msa0864320:intron
GCTTTCATGTTCGGGTGATG+CGG 0.584502 5_4:-64652456 None:intergenic
TTGTTACGAAGAGAAAATGT+TGG 0.591213 5_4:+64649443 Msa0864320:CDS
AAAGCCGATCTAGAAAGCTC+GGG 0.593461 5_4:+64653914 Msa0864320:intron
AGACGATTCTTACCATGGAA+AGG 0.600387 5_4:+64650256 Msa0864320:CDS
GAATTGTTGTACGATTGGGA+TGG 0.601169 5_4:+64651383 Msa0864320:CDS
AAAGAAGAGTAAGAAACAGG+AGG 0.611848 5_4:+64650660 Msa0864320:CDS
ACACCTACCTCTGCTAGAAG+AGG 0.613665 5_4:-64653556 None:intergenic
ACTCAGATTCTCGTAGTAGG+AGG 0.613815 5_4:+64650620 Msa0864320:CDS
CATTTATGTCACTTGCTGCG+AGG 0.615123 5_4:+64650422 Msa0864320:CDS
GTGATAGACGATTCTTACCA+TGG 0.616260 5_4:+64650251 Msa0864320:CDS
GATGGATCATCATGTTCTCG+TGG 0.618593 5_4:-64653664 None:intergenic
ATAGTTCGTGTTCCATAGAG+AGG 0.620282 5_4:+64650596 Msa0864320:CDS
CCATACAACCAGAAGATAAG+GGG 0.626627 5_4:-64653686 None:intergenic
CACCTACCTCTGCTAGAAGA+GGG 0.628524 5_4:-64653555 None:intergenic
ATGTGTCTGACCATTTGTCA+AGG 0.628731 5_4:+64650320 Msa0864320:CDS
ATTGTGAAGCATTAACGCCA+TGG 0.630733 5_4:-64652622 None:intergenic
ACAACCAGAAGATAAGGGGA+TGG 0.637113 5_4:-64653682 None:intergenic
TAATCACCCTCTTCTAGCAG+AGG 0.639180 5_4:+64653549 Msa0864320:CDS
AGAATGATGAACATAAGAGG+AGG 0.639662 5_4:+64649698 Msa0864320:CDS
CATCGCTAACTAATTTGACA+GGG 0.643527 5_4:-64650447 None:intergenic
AAGGGATTTATGGATAACCA+TGG 0.651198 5_4:+64650985 Msa0864320:CDS
AAATTAAAGAAATTCCATCC+CGG 0.652333 5_4:+64648965 Msa0864320:CDS
TTGTACCGAATTGTATACGA+TGG 0.665470 5_4:-64649257 None:intergenic
AAGCAAGACTGACTTGCATG+AGG 0.668168 5_4:+64653943 Msa0864320:CDS
GCTGAAGCTATTGAAAAGCG+TGG 0.671675 5_4:+64650832 Msa0864320:CDS
GGATCATCATGTTCTCGTGG+AGG 0.683144 5_4:-64653661 None:intergenic
GAAGAGGGTGATTATCCGTG+AGG 0.707601 5_4:-64653540 None:intergenic
GGGACATCATCAATGACGAG+AGG 0.729610 5_4:+64654343 Msa0864320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTAGAAAATACTT+TGG + chr5_4:64649954-64649973 Msa0864320:intron 10.0%
!! AAAAAAAAAAAAAACTTTAC+GGG - chr5_4:64651467-64651486 None:intergenic 10.0%
!! TTGCATTTATTTATTAAATT+TGG + chr5_4:64651916-64651935 Msa0864320:intron 10.0%
!!! CTTTTATTTGTAAAAAAAAT+TGG - chr5_4:64654044-64654063 None:intergenic 10.0%
!!! CAATTTTTTTTACAAATAAA+AGG + chr5_4:64654042-64654061 Msa0864320:intron 10.0%
!!! ATATTTAAACTATTTTTGAG+AGG - chr5_4:64647479-64647498 None:intergenic 15.0%
!! AACACTTAATTGTAAATTTA+GGG - chr5_4:64647612-64647631 None:intergenic 15.0%
!! AAACACTTAATTGTAAATTT+AGG - chr5_4:64647613-64647632 None:intergenic 15.0%
!!! TTGAGTTTTATTAAGAATTT+TGG + chr5_4:64647922-64647941 Msa0864320:intron 15.0%
!!! TGAGTTTTATTAAGAATTTT+GGG + chr5_4:64647923-64647942 Msa0864320:intron 15.0%
!! ATTAAAGATAATTCAACTTA+TGG - chr5_4:64649850-64649869 None:intergenic 15.0%
!!! GTGTCAAAATATTTTTAAAA+TGG + chr5_4:64650158-64650177 Msa0864320:intron 15.0%
!! AACAACAATGAATTTATAAT+TGG - chr5_4:64650189-64650208 None:intergenic 15.0%
!! ATTAGATTAATAAACTTTGT+AGG + chr5_4:64650229-64650248 Msa0864320:intron 15.0%
!!! TTCATTTTATTATCAGATTT+AGG - chr5_4:64650502-64650521 None:intergenic 15.0%
!! TATACTTGAAAAGAAAATAT+TGG + chr5_4:64650690-64650709 Msa0864320:CDS 15.0%
!!! TGATATAATTTGTCTATATT+AGG + chr5_4:64651105-64651124 Msa0864320:intron 15.0%
!!! GATAATTTTGATTTTCTTAA+TGG - chr5_4:64651790-64651809 None:intergenic 15.0%
!! ATTACATATTACAATTAACA+AGG - chr5_4:64652019-64652038 None:intergenic 15.0%
!! TTATCTCCATAAAAATATAA+TGG - chr5_4:64652134-64652153 None:intergenic 15.0%
!! AAAGAATAACATAAGAATAT+AGG - chr5_4:64652749-64652768 None:intergenic 15.0%
!!! AATTAGGAAAAGAAATTTTA+AGG - chr5_4:64653250-64653269 None:intergenic 15.0%
!! TATAAGAATACACAAAAAAT+AGG - chr5_4:64653895-64653914 None:intergenic 15.0%
!! TTTCATAAAATGTTAAATCT+TGG - chr5_4:64654071-64654090 None:intergenic 15.0%
!! TACATAAAGAAAATGAATTA+AGG + chr5_4:64654396-64654415 Msa0864320:intron 15.0%
!!! ATAAATAAATAACGGATTTA+TGG + chr5_4:64654502-64654521 Msa0864320:intron 15.0%
!! AAAATAACAAAGTTCATTAA+TGG - chr5_4:64654584-64654603 None:intergenic 15.0%
!!! CTTTTTAATATTAGTCTTTT+AGG - chr5_4:64655419-64655438 None:intergenic 15.0%
!! AGACTAATATTAAAAAGAAA+CGG + chr5_4:64655422-64655441 Msa0864320:intron 15.0%
!!! AATGTTCATTTATGTTTTAT+AGG + chr5_4:64655606-64655625 Msa0864320:intron 15.0%
!!! ATGTTCATTTATGTTTTATA+GGG + chr5_4:64655607-64655626 Msa0864320:intron 15.0%
!!! TTTTGCTCTTTAATTTTGAA+GGG + chr5_4:64647107-64647126 Msa0864320:intron 20.0%
!! ACTTCCATTAATTTATTGTT+CGG - chr5_4:64647409-64647428 None:intergenic 20.0%
!! AATATACCTTTACTATCTTT+AGG + chr5_4:64647494-64647513 Msa0864320:intron 20.0%
!!! TTTTTTCCTAAAGATAGTAA+AGG - chr5_4:64647503-64647522 None:intergenic 20.0%
!!! TTAACTAGTTTTATATGCTT+CGG - chr5_4:64647702-64647721 None:intergenic 20.0%
!!! AATTTTCACAAAAGTTTTTG+TGG + chr5_4:64647756-64647775 Msa0864320:intron 20.0%
!!! CCTTTTCATTATTTAGTTTT+TGG - chr5_4:64647813-64647832 None:intergenic 20.0%
!! CCAAAAACTAAATAATGAAA+AGG + chr5_4:64647810-64647829 Msa0864320:intron 20.0%
!! TCTTAATAAAACTCAAACTT+AGG - chr5_4:64647918-64647937 None:intergenic 20.0%
!!! AGGATTTTACTATATGTATT+AGG + chr5_4:64648078-64648097 Msa0864320:intron 20.0%
!! AATGTGTATGGAAAAATATA+TGG + chr5_4:64648152-64648171 Msa0864320:intron 20.0%
!! TATGTTATGTTATCTCAAAT+AGG - chr5_4:64648357-64648376 None:intergenic 20.0%
!!! CTTTGAAATATTCCAAAAAT+GGG - chr5_4:64649183-64649202 None:intergenic 20.0%
!!! TCTTTGAAATATTCCAAAAA+TGG - chr5_4:64649184-64649203 None:intergenic 20.0%
!!! ATTTTCCAATAATGTGTAAA+AGG + chr5_4:64649344-64649363 Msa0864320:CDS 20.0%
!!! TTATCAAAGATCTCATTTTT+TGG - chr5_4:64649504-64649523 None:intergenic 20.0%
!! TCATATTCTATTATTAGCAT+CGG + chr5_4:64649817-64649836 Msa0864320:intron 20.0%
!! TTACAGTTGATTAAAAGATA+TGG - chr5_4:64650041-64650060 None:intergenic 20.0%
!!! CTTAATTTACCCAATTTTTT+TGG + chr5_4:64650360-64650379 Msa0864320:intron 20.0%
!! TATTCAACACCAAAAAAATT+GGG - chr5_4:64650372-64650391 None:intergenic 20.0%
!! ATATTCAACACCAAAAAAAT+TGG - chr5_4:64650373-64650392 None:intergenic 20.0%
!! CATAATTGCTTATAAAATTC+AGG + chr5_4:64650864-64650883 Msa0864320:CDS 20.0%
!! CTTGATTAAAAAAATTCATC+TGG - chr5_4:64651134-64651153 None:intergenic 20.0%
!!! GAATATTTTTTGAGCATATA+TGG + chr5_4:64651174-64651193 Msa0864320:CDS 20.0%
!!! TTATGTATTTGAATTGATTC+TGG - chr5_4:64651427-64651446 None:intergenic 20.0%
!!! AGATATTGTTGAATTTTGAT+TGG - chr5_4:64651575-64651594 None:intergenic 20.0%
!! TCAAAATTCAACAATATCTT+TGG + chr5_4:64651576-64651595 Msa0864320:CDS 20.0%
!!! GCAATGACTTTATTTATTAA+TGG + chr5_4:64651946-64651965 Msa0864320:intron 20.0%
!!! ACTTTATTTATTAATGGAAG+AGG + chr5_4:64651952-64651971 Msa0864320:intron 20.0%
!!! CTTTATTTATTAATGGAAGA+GGG + chr5_4:64651953-64651972 Msa0864320:intron 20.0%
!!! TTGTGTCCATTATATTTTTA+TGG + chr5_4:64652125-64652144 Msa0864320:intron 20.0%
!! GTAACAATAATCTTACAATT+AGG - chr5_4:64652170-64652189 None:intergenic 20.0%
!! TTATACCAAAGTCAATATTA+GGG - chr5_4:64652224-64652243 None:intergenic 20.0%
!! ATTATACCAAAGTCAATATT+AGG - chr5_4:64652225-64652244 None:intergenic 20.0%
!! TCAAAAAAATTACCATACAT+CGG - chr5_4:64652593-64652612 None:intergenic 20.0%
!! AACATGCATAACATTAAATT+AGG - chr5_4:64653266-64653285 None:intergenic 20.0%
!! TTAATGATTATAAACACAGA+AGG - chr5_4:64653724-64653743 None:intergenic 20.0%
!!! TTTCTTAGGTGTTTTTTATA+TGG - chr5_4:64654544-64654563 None:intergenic 20.0%
!!! TGTCAATTGTTTTACAATTC+AGG - chr5_4:64646843-64646862 None:intergenic 25.0%
! TTGACAATTTACTATCTCTA+CGG + chr5_4:64646857-64646876 Msa0864320:intron 25.0%
! ATCAAGTGATGATAAATCTA+TGG - chr5_4:64647035-64647054 None:intergenic 25.0%
! TTAGGAAATTATGTAGAAAG+AGG - chr5_4:64647079-64647098 None:intergenic 25.0%
!!! CTTTTGCTCTTTAATTTTGA+AGG + chr5_4:64647106-64647125 Msa0864320:intron 25.0%
! TGAGCTAATCAAATTCATTA+AGG - chr5_4:64647239-64647258 None:intergenic 25.0%
! TATTGCAATTACCATATATC+AGG + chr5_4:64647293-64647312 Msa0864320:intron 25.0%
! GAATCCGAACAATAAATTAA+TGG + chr5_4:64647402-64647421 Msa0864320:intron 25.0%
! GCAAAATTAATATTCTCAGT+TGG + chr5_4:64647565-64647584 Msa0864320:intron 25.0%
! ATTAATATTCTCAGTTGGAT+CGG + chr5_4:64647570-64647589 Msa0864320:intron 25.0%
! AAACTAGTTAAGTTTGATTC+AGG + chr5_4:64647711-64647730 Msa0864320:intron 25.0%
! GTGACTTATGATTATGATTA+AGG + chr5_4:64647844-64647863 Msa0864320:intron 25.0%
!!! AACCTTTTTTTGACAACTTT+TGG + chr5_4:64648402-64648421 Msa0864320:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr5_4:64648487-64648506 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr5_4:64648500-64648519 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr5_4:64648499-64648518 Msa0864320:intron 25.0%
! ATCTTCAGTATAGTCATAAA+AGG - chr5_4:64648819-64648838 None:intergenic 25.0%
!!! TTCCTTTTAACTGTTTTTTG+CGG - chr5_4:64648908-64648927 None:intergenic 25.0%
!! TTCTTTAATTTCTCTGGATA+TGG - chr5_4:64648956-64648975 None:intergenic 25.0%
!! TGGAATTTCTTTAATTTCTC+TGG - chr5_4:64648962-64648981 None:intergenic 25.0%
! AAATTAAAGAAATTCCATCC+CGG + chr5_4:64648965-64648984 Msa0864320:CDS 25.0%
! GGAATATTTCAAAGATTCAA+AGG + chr5_4:64649189-64649208 Msa0864320:CDS 25.0%
! AAAGATTCAAAGGTTTATCA+GGG + chr5_4:64649199-64649218 Msa0864320:CDS 25.0%
!! CTTTTCCTTTTACACATTAT+TGG - chr5_4:64649352-64649371 None:intergenic 25.0%
! TAGAAGAGAAAGAATAAGTT+TGG + chr5_4:64649375-64649394 Msa0864320:CDS 25.0%
!! TAACAAAACTTTTTGATCTC+TGG - chr5_4:64649429-64649448 None:intergenic 25.0%
!! AAAATGTTGGACACAATTTT+GGG + chr5_4:64649456-64649475 Msa0864320:CDS 25.0%
!! ATTACTTCAACTTTTGATGA+TGG - chr5_4:64649619-64649638 None:intergenic 25.0%
! AAGAAAACTCTACCATAAAA+TGG + chr5_4:64649735-64649754 Msa0864320:CDS 25.0%
!! AGAATGATATCACCATTTTA+TGG - chr5_4:64649750-64649769 None:intergenic 25.0%
! CATATTCTATTATTAGCATC+GGG + chr5_4:64649818-64649837 Msa0864320:intron 25.0%
! CTGAGCAAAAATTTACTATT+AGG - chr5_4:64650082-64650101 None:intergenic 25.0%
!! TTTAACTTTACCTTGACAAA+TGG - chr5_4:64650333-64650352 None:intergenic 25.0%
! AATTTCTTTGTCATCAACTT+TGG - chr5_4:64650572-64650591 None:intergenic 25.0%
! TAAAAAGAAGAGTAAGAAAC+AGG + chr5_4:64650657-64650676 Msa0864320:CDS 25.0%
! AAGCAAAATGTTCATGTTAT+AGG + chr5_4:64651151-64651170 Msa0864320:intron 25.0%
! AGCAAAATGTTCATGTTATA+GGG + chr5_4:64651152-64651171 Msa0864320:intron 25.0%
!! TCTTCAACATATTTCTTTTC+CGG + chr5_4:64651236-64651255 Msa0864320:CDS 25.0%
!!! TGAAATATGTCACTTTTGAA+AGG + chr5_4:64651342-64651361 Msa0864320:intron 25.0%
!! ATTTGAATTGATTCTGGTAA+TGG - chr5_4:64651421-64651440 None:intergenic 25.0%
! AAATAAATTAAGAAGATGCC+AGG - chr5_4:64651641-64651660 None:intergenic 25.0%
!! ATTTATTTGAGCCTTGTATT+TGG + chr5_4:64651653-64651672 Msa0864320:intron 25.0%
! AGATATATTAGCCAAATACA+AGG - chr5_4:64651667-64651686 None:intergenic 25.0%
! ACATATATGTTGTCTTGTAT+AGG + chr5_4:64651690-64651709 Msa0864320:intron 25.0%
! ATTATCTTAAAATGTTCTGC+AGG + chr5_4:64651804-64651823 Msa0864320:intron 25.0%
! GACAATGCATATATATAATG+TGG + chr5_4:64651990-64652009 Msa0864320:intron 25.0%
! ATATGCTAATATGTATATGC+AGG + chr5_4:64652264-64652283 Msa0864320:intron 25.0%
! TGAGAGTCTTAACAATATTA+AGG - chr5_4:64652838-64652857 None:intergenic 25.0%
! GAACATGCGTTTATAATTTA+CGG + chr5_4:64652878-64652897 Msa0864320:intron 25.0%
!! TCATACAAAACTAGTTTGTA+AGG - chr5_4:64652913-64652932 None:intergenic 25.0%
!!! GAAATGAAGTTTTAGCTTTT+AGG + chr5_4:64653188-64653207 Msa0864320:intron 25.0%
! TACTTTGTACATTTCATCAA+GGG - chr5_4:64653301-64653320 None:intergenic 25.0%
! TTACTTTGTACATTTCATCA+AGG - chr5_4:64653302-64653321 None:intergenic 25.0%
!!! GACACATTTTTTCTTCTAAA+AGG + chr5_4:64653822-64653841 Msa0864320:intron 25.0%
!!! AACATACTTTCAAGTTAATG+AGG + chr5_4:64654138-64654157 Msa0864320:CDS 25.0%
! TAAAGCTTCTATTGCATATT+TGG + chr5_4:64654169-64654188 Msa0864320:intron 25.0%
!! GCAATATCTTTTTCTTTTGT+AGG + chr5_4:64654228-64654247 Msa0864320:intron 25.0%
!!! CATTTTCTAGGAACATTAAT+TGG - chr5_4:64654283-64654302 None:intergenic 25.0%
! CAATTAATGTTCCTAGAAAA+TGG + chr5_4:64654281-64654300 Msa0864320:CDS 25.0%
!! AAGAAACAGATAGCATATTT+TGG + chr5_4:64654316-64654335 Msa0864320:CDS 25.0%
! GAATATCATACACTATACTT+TGG + chr5_4:64654371-64654390 Msa0864320:intron 25.0%
! AAAACTTAGTTCATTTCCTT+AGG + chr5_4:64654422-64654441 Msa0864320:intron 25.0%
!!! AAACTTTGGTGTATTTTCTT+AGG - chr5_4:64654558-64654577 None:intergenic 25.0%
!! TTCATTAATGGACAAAACTT+TGG - chr5_4:64654572-64654591 None:intergenic 25.0%
! AAAGTTAGCACAAATACAAT+CGG - chr5_4:64654832-64654851 None:intergenic 25.0%
!!! TCAAAAATAGATTGGTCTAA+TGG - chr5_4:64654896-64654915 None:intergenic 25.0%
! TAGAACTGTCAAAAATAGAT+TGG - chr5_4:64654904-64654923 None:intergenic 25.0%
! TTGTTAAGGAAACTTAAAAG+AGG + chr5_4:64654945-64654964 Msa0864320:intron 25.0%
!!! TATTAGAAGAGAGTTTTGAA+AGG + chr5_4:64655174-64655193 Msa0864320:intron 25.0%
! ATTCTATCAAATACCAATGT+AGG + chr5_4:64655484-64655503 Msa0864320:intron 25.0%
!! ATTAAAGACTTCTTTTGCAA+AGG + chr5_4:64655523-64655542 Msa0864320:CDS 25.0%
! AAAATAGATGATATAGGTCT+TGG - chr5_4:64655672-64655691 None:intergenic 25.0%
AATTTACTATCTCTACGGTT+TGG + chr5_4:64646862-64646881 Msa0864320:intron 30.0%
AGAAACATATGAACATGCTA+TGG + chr5_4:64646997-64647016 Msa0864320:intron 30.0%
! TAGCATGAGCTTTTACATTT+GGG - chr5_4:64647275-64647294 None:intergenic 30.0%
! ATAGCATGAGCTTTTACATT+TGG - chr5_4:64647276-64647295 None:intergenic 30.0%
!! TTCTAAGGTCATAGATTTGT+TGG + chr5_4:64647437-64647456 Msa0864320:intron 30.0%
! TCTAAGGTCATAGATTTGTT+GGG + chr5_4:64647438-64647457 Msa0864320:intron 30.0%
CAGGTGAAAAAATTGCAATT+TGG + chr5_4:64647730-64647749 Msa0864320:intron 30.0%
TAAACCAATGCAAATTGAAC+AGG - chr5_4:64647783-64647802 None:intergenic 30.0%
ACAAAGTCATAAATGTCACA+TGG - chr5_4:64647870-64647889 None:intergenic 30.0%
GTGTATGGAAAAATATATGG+TGG + chr5_4:64648155-64648174 Msa0864320:intron 30.0%
GTCCAAAAGTTGTCAAAAAA+AGG - chr5_4:64648407-64648426 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr5_4:64648474-64648493 None:intergenic 30.0%
! GAGAATTTTTCACTTGTCTA+TGG + chr5_4:64648732-64648751 Msa0864320:intron 30.0%
ATGTTGAATTATGTCCACTA+GGG + chr5_4:64648837-64648856 Msa0864320:intron 30.0%
!! CTTTTATTTAATGACCCTAG+TGG - chr5_4:64648854-64648873 None:intergenic 30.0%
CACTAGGGTCATTAAATAAA+AGG + chr5_4:64648852-64648871 Msa0864320:intron 30.0%
! GCTGATCATTAACATCATTT+TGG - chr5_4:64648886-64648905 None:intergenic 30.0%
GAAGAAATATCAACCTAAAG+TGG + chr5_4:64648925-64648944 Msa0864320:CDS 30.0%
CAAAGATTCAAAGGTTTATC+AGG + chr5_4:64649198-64649217 Msa0864320:CDS 30.0%
TTGTTACGAAGAGAAAATGT+TGG + chr5_4:64649443-64649462 Msa0864320:CDS 30.0%
! GAAAATGTTGGACACAATTT+TGG + chr5_4:64649455-64649474 Msa0864320:CDS 30.0%
!!! TCGATGCATTTTTTTCTTCA+AGG - chr5_4:64649539-64649558 None:intergenic 30.0%
AAGAGAATGATGAACATAAG+AGG + chr5_4:64649695-64649714 Msa0864320:CDS 30.0%
!!! AACCAACCTTTTTTTTTAGC+AGG + chr5_4:64649890-64649909 Msa0864320:intron 30.0%
ATTTCCTGAAATTTGTCCAT+GGG - chr5_4:64649917-64649936 None:intergenic 30.0%
TGGAAAAGAAAATGCAACAT+TGG + chr5_4:64650710-64650729 Msa0864320:CDS 30.0%
GGAAAAGAAAATGCAACATT+GGG + chr5_4:64650711-64650730 Msa0864320:CDS 30.0%
ATTCTAAATTCATGCTTCCA+TGG - chr5_4:64651005-64651024 None:intergenic 30.0%
! ATGGAAGCATGAATTTAGAA+TGG + chr5_4:64651004-64651023 Msa0864320:CDS 30.0%
TACACTTACTTTGCTTCATT+TGG - chr5_4:64651045-64651064 None:intergenic 30.0%
!!! TTTTTTGAGCATATATGGAC+TGG + chr5_4:64651179-64651198 Msa0864320:CDS 30.0%
!! TTTTTGAGCATATATGGACT+GGG + chr5_4:64651180-64651199 Msa0864320:CDS 30.0%
GTGTCTACTTATATTCTTAC+CGG - chr5_4:64651258-64651277 None:intergenic 30.0%
!!! AATATGTCACTTTTGAAAGG+TGG + chr5_4:64651345-64651364 Msa0864320:intron 30.0%
!! ATTCTGGTAATGGTTGTAAA+GGG - chr5_4:64651411-64651430 None:intergenic 30.0%
!!! TAACCATGTTGTTTTGAAAC+AGG + chr5_4:64651540-64651559 Msa0864320:intron 30.0%
AAACCTGTTTCAAAACAACA+TGG - chr5_4:64651546-64651565 None:intergenic 30.0%
!!! TGTTGAATTTTGATTGGATC+CGG - chr5_4:64651569-64651588 None:intergenic 30.0%
CATCATACATTGTAATTACC+TGG + chr5_4:64651620-64651639 Msa0864320:intron 30.0%
!! CATTATCAGTTGATAACCTT+TGG + chr5_4:64651722-64651741 Msa0864320:CDS 30.0%
GTTAATATGTACCTTTCCAA+AGG - chr5_4:64651741-64651760 None:intergenic 30.0%
TATTTACATTCGTCCTTCAT+CGG - chr5_4:64651868-64651887 None:intergenic 30.0%
AAACAATGCATATGTGTATG+TGG - chr5_4:64652192-64652211 None:intergenic 30.0%
AGTCAATATTAGGGAGTAAA+TGG - chr5_4:64652215-64652234 None:intergenic 30.0%
!! TTACTCCCTAATATTGACTT+TGG + chr5_4:64652216-64652235 Msa0864320:intron 30.0%
TCCAACAATTATCAGAGTAT+GGG - chr5_4:64652373-64652392 None:intergenic 30.0%
CACTCTCATAAGTATAATCA+TGG - chr5_4:64652511-64652530 None:intergenic 30.0%
!!! TTTTTTGAAGAGTTTGACCA+TGG + chr5_4:64652605-64652624 Msa0864320:CDS 30.0%
AAATGACTGTTTGTAGCATT+TGG - chr5_4:64652665-64652684 None:intergenic 30.0%
CTCTCATATTAGATGAGATA+TGG + chr5_4:64652852-64652871 Msa0864320:intron 30.0%
AAAGATGATGATAACACTCT+TGG - chr5_4:64652959-64652978 None:intergenic 30.0%
! GTAAATAGTTGATATGCATG+TGG + chr5_4:64653318-64653337 Msa0864320:intron 30.0%
ATGTTCCATTCAAAGGAAAA+CGG - chr5_4:64654123-64654142 None:intergenic 30.0%
! TGAAAGTATGTTCCATTCAA+AGG - chr5_4:64654130-64654149 None:intergenic 30.0%
ATGTTCCTAGAAAATGGATA+TGG + chr5_4:64654287-64654306 Msa0864320:CDS 30.0%
! AGATTCCATATCCATTTTCT+AGG - chr5_4:64654295-64654314 None:intergenic 30.0%
ACTCTTGTTAATAAGTAGAG+CGG + chr5_4:64654781-64654800 Msa0864320:intron 30.0%
! TTCTATTATCGAAGTTCTGA+AGG + chr5_4:64654919-64654938 Msa0864320:intron 30.0%
TTAAGGAAACTTAAAAGAGG+AGG + chr5_4:64654948-64654967 Msa0864320:intron 30.0%
!!! TGGGTTTTGAAAAAAAAGGA+AGG + chr5_4:64655048-64655067 Msa0864320:intron 30.0%
GGAAGAAATAGAAGAACATT+AGG + chr5_4:64655078-64655097 Msa0864320:intron 30.0%
AGAAATAGAAGAACATTAGG+AGG + chr5_4:64655081-64655100 Msa0864320:intron 30.0%
! TTGTTTAGTTCCTCAAAATG+AGG - chr5_4:64655151-64655170 None:intergenic 30.0%
! CTTTGTTTGGATGTTTAGAA+GGG - chr5_4:64655372-64655391 None:intergenic 30.0%
AAATGTTAACAAGTGTCCTA+AGG - chr5_4:64655395-64655414 None:intergenic 30.0%
TAAAAAGAAACGGCTAGAAT+TGG + chr5_4:64655432-64655451 Msa0864320:intron 30.0%
AGAGCAATTGATACAAAAAC+AGG + chr5_4:64655642-64655661 Msa0864320:CDS 30.0%
CGATGCAAAATAGATGATAT+AGG - chr5_4:64655678-64655697 None:intergenic 30.0%
AACAAACATTTCACAGCGAA+AGG - chr5_4:64646932-64646951 None:intergenic 35.0%
!! CTTGATGATGTTGTTTCAAG+TGG + chr5_4:64647049-64647068 Msa0864320:intron 35.0%
AAGAGCAAAAGCTTCAACTT+AGG - chr5_4:64647097-64647116 None:intergenic 35.0%
GTGTCTAGTAACCTGATATA+TGG - chr5_4:64647307-64647326 None:intergenic 35.0%
ACTAGACACTAATCACTTGA+TGG + chr5_4:64647318-64647337 Msa0864320:intron 35.0%
CTAGACACTAATCACTTGAT+GGG + chr5_4:64647319-64647338 Msa0864320:intron 35.0%
TAGACACTAATCACTTGATG+GGG + chr5_4:64647320-64647339 Msa0864320:intron 35.0%
GCAATTACTATGTGATAGAG+TGG + chr5_4:64647356-64647375 Msa0864320:intron 35.0%
!! TGGCGTTACAAGTTATTTCT+AGG + chr5_4:64647376-64647395 Msa0864320:intron 35.0%
!! GGCGTTACAAGTTATTTCTA+GGG + chr5_4:64647377-64647396 Msa0864320:intron 35.0%
!! GCGTTACAAGTTATTTCTAG+GGG + chr5_4:64647378-64647397 Msa0864320:intron 35.0%
! TGGAAGTGAATCGATTTCTA+AGG + chr5_4:64647422-64647441 Msa0864320:intron 35.0%
TTGGATCGGATTCATATTAG+AGG + chr5_4:64647584-64647603 Msa0864320:intron 35.0%
ATCATAAGTCACTCAAGTCT+AGG - chr5_4:64647836-64647855 None:intergenic 35.0%
!!! GAATTTTGGGTGCTATTTGA+AGG + chr5_4:64647936-64647955 Msa0864320:intron 35.0%
TGTAGTCATAGTCGAGAAAT+AGG - chr5_4:64648107-64648126 None:intergenic 35.0%
TTTCTCGACTATGACTACAT+TGG + chr5_4:64648108-64648127 Msa0864320:intron 35.0%
!! ACTATGACTACATTGGTTCA+AGG + chr5_4:64648115-64648134 Msa0864320:intron 35.0%
TGGTATCTAGTCAATGTGTA+TGG + chr5_4:64648140-64648159 Msa0864320:intron 35.0%
TCTCAAATAGGAAGCTCAAT+TGG - chr5_4:64648345-64648364 None:intergenic 35.0%
TTTCTTATCCATGCAAGGAT+TGG + chr5_4:64648625-64648644 Msa0864320:intron 35.0%
AAATTGTACCAATCCTTGCA+TGG - chr5_4:64648636-64648655 None:intergenic 35.0%
GATGTTGAATTATGTCCACT+AGG + chr5_4:64648836-64648855 Msa0864320:intron 35.0%
AGCCGCAAAAAACAGTTAAA+AGG + chr5_4:64648903-64648922 Msa0864320:CDS 35.0%
! ACATAACTTTTCCTCTGCTT+CGG - chr5_4:64649019-64649038 None:intergenic 35.0%
! ACATAACTTTTCCTCTGCTT+CGG - chr5_4:64649019-64649038 None:intergenic 35.0%
! AATAATGGCTTTTGACACTC+AGG - chr5_4:64649133-64649152 None:intergenic 35.0%
! TTCCATCTCTTTCCCATTTT+TGG + chr5_4:64649168-64649187 Msa0864320:CDS 35.0%
TTCCAAAAATGGGAAAGAGA+TGG - chr5_4:64649173-64649192 None:intergenic 35.0%
ATCTGCCATCGTATACAATT+CGG + chr5_4:64649252-64649271 Msa0864320:CDS 35.0%
TTGTACCGAATTGTATACGA+TGG - chr5_4:64649260-64649279 None:intergenic 35.0%
CAGAAAATGACTTCATTGTC+AGG + chr5_4:64649286-64649305 Msa0864320:CDS 35.0%
GTTTATGTCTAGTTGAGAGT+AGG + chr5_4:64649308-64649327 Msa0864320:CDS 35.0%
!!! CAAAGATCTCATTTTTTGGC+TGG - chr5_4:64649500-64649519 None:intergenic 35.0%
AGAATGATGAACATAAGAGG+AGG + chr5_4:64649698-64649717 Msa0864320:CDS 35.0%
! ATGAACATAAGAGGAGGTAT+TGG + chr5_4:64649704-64649723 Msa0864320:CDS 35.0%
!! TGAACATAAGAGGAGGTATT+GGG + chr5_4:64649705-64649724 Msa0864320:CDS 35.0%
GTCCTGCTAAAAAAAAAGGT+TGG - chr5_4:64649895-64649914 None:intergenic 35.0%
ATGGGTCCTGCTAAAAAAAA+AGG - chr5_4:64649899-64649918 None:intergenic 35.0%
!!! TTTTTTTTTAGCAGGACCCA+TGG + chr5_4:64649898-64649917 Msa0864320:intron 35.0%
CATTTCCTGAAATTTGTCCA+TGG - chr5_4:64649918-64649937 None:intergenic 35.0%
TTGCTCAGCATAGATATCAA+TGG + chr5_4:64650094-64650113 Msa0864320:intron 35.0%
TGCTCAGCATAGATATCAAT+GGG + chr5_4:64650095-64650114 Msa0864320:intron 35.0%
CATCGCTAACTAATTTGACA+GGG - chr5_4:64650450-64650469 None:intergenic 35.0%
TCATCGCTAACTAATTTGAC+AGG - chr5_4:64650451-64650470 None:intergenic 35.0%
CGATGAGCAAAACAAAAACA+TGG + chr5_4:64650465-64650484 Msa0864320:CDS 35.0%
AAAGAAGAGTAAGAAACAGG+AGG + chr5_4:64650660-64650679 Msa0864320:CDS 35.0%
!! TGTGTTGATCACTTTTAGAG+TGG - chr5_4:64650753-64650772 None:intergenic 35.0%
AAGGGATTTATGGATAACCA+TGG + chr5_4:64650985-64651004 Msa0864320:CDS 35.0%
ACTTACTTTGCTTCATTTGG+TGG - chr5_4:64651042-64651061 None:intergenic 35.0%
TGAAAGGTGGATGTAAATGT+TGG + chr5_4:64651358-64651377 Msa0864320:intron 35.0%
AATTGTTGTACGATTGGGAT+GGG + chr5_4:64651384-64651403 Msa0864320:CDS 35.0%
!! GATTCTGGTAATGGTTGTAA+AGG - chr5_4:64651412-64651431 None:intergenic 35.0%
!!! GTTGTTTTGAAACAGGTTTC+CGG + chr5_4:64651547-64651566 Msa0864320:intron 35.0%
TGATCAAGTTTGCATAGTCT+TGG - chr5_4:64651602-64651621 None:intergenic 35.0%
!! TCAGTTGATAACCTTTGGAA+AGG + chr5_4:64651727-64651746 Msa0864320:CDS 35.0%
ATTATGCAAGTTCTCTTGCA+AGG + chr5_4:64651887-64651906 Msa0864320:CDS 35.0%
TCTTACAATTAGGTGTGAAG+AGG - chr5_4:64652160-64652179 None:intergenic 35.0%
ACAATTGATTGATCTGTGGT+TGG - chr5_4:64652314-64652333 None:intergenic 35.0%
TGCTACAATTGATTGATCTG+TGG - chr5_4:64652318-64652337 None:intergenic 35.0%
ATCAATTGTAGCAACCCAAA+TGG + chr5_4:64652325-64652344 Msa0864320:CDS 35.0%
GTATGGGAAACAATATGCAT+TGG - chr5_4:64652357-64652376 None:intergenic 35.0%
TCCCATACTCTGATAATTGT+TGG + chr5_4:64652369-64652388 Msa0864320:CDS 35.0%
CTCCAACAATTATCAGAGTA+TGG - chr5_4:64652374-64652393 None:intergenic 35.0%
AATGATGTGCTTTCATGTTC+GGG - chr5_4:64652467-64652486 None:intergenic 35.0%
CAATGATGTGCTTTCATGTT+CGG - chr5_4:64652468-64652487 None:intergenic 35.0%
TGACTGCTGAAGTTAAATGT+TGG - chr5_4:64652554-64652573 None:intergenic 35.0%
AAAAATTACCATACATCGGC+AGG - chr5_4:64652589-64652608 None:intergenic 35.0%
AAAGAATAGCATGCATTGTC+AGG - chr5_4:64653076-64653095 None:intergenic 35.0%
! ACTACTTCAAGTGCTTTAAG+TGG + chr5_4:64653156-64653175 Msa0864320:intron 35.0%
GGACATAACTGAACAGATAA+AGG - chr5_4:64653522-64653541 None:intergenic 35.0%
TTGAAAGAGAGCTTGTCTTT+AGG + chr5_4:64653799-64653818 Msa0864320:intron 35.0%
TGAAAGAGAGCTTGTCTTTA+GGG + chr5_4:64653800-64653819 Msa0864320:intron 35.0%
TGTTCCATTCAAAGGAAAAC+GGG - chr5_4:64654122-64654141 None:intergenic 35.0%
!!! CAGATAGCATATTTTGGTAC+CGG + chr5_4:64654322-64654341 Msa0864320:CDS 35.0%
!!! AGATAGCATATTTTGGTACC+GGG + chr5_4:64654323-64654342 Msa0864320:CDS 35.0%
!! AATCATATGAAGAGCACCTA+AGG - chr5_4:64654441-64654460 None:intergenic 35.0%
TAATAAGTAGAGCGGTCAAA+TGG + chr5_4:64654789-64654808 Msa0864320:intron 35.0%
ACATGATCCAACCAAAAGTA+TGG + chr5_4:64654857-64654876 Msa0864320:intron 35.0%
! CATGATCCAACCAAAAGTAT+GGG + chr5_4:64654858-64654877 Msa0864320:intron 35.0%
! CATTATCCCATACTTTTGGT+TGG - chr5_4:64654867-64654886 None:intergenic 35.0%
! CAACCAAAAGTATGGGATAA+TGG + chr5_4:64654865-64654884 Msa0864320:intron 35.0%
!! AAAAGTATGGGATAATGGAC+CGG + chr5_4:64654870-64654889 Msa0864320:intron 35.0%
!! AAATAGATTGGTCTAATGGC+CGG - chr5_4:64654892-64654911 None:intergenic 35.0%
!! AGAGGAGGTTTTGTATTGAA+AGG + chr5_4:64654963-64654982 Msa0864320:intron 35.0%
AAAAAAAAGGAAGGAGCAAG+TGG + chr5_4:64655057-64655076 Msa0864320:intron 35.0%
! ACATTAGGAGGAGAAGATTT+TGG + chr5_4:64655093-64655112 Msa0864320:intron 35.0%
TTAGTTCCTCAAAATGAGGA+GGG - chr5_4:64655147-64655166 None:intergenic 35.0%
! TTTAGTTCCTCAAAATGAGG+AGG - chr5_4:64655148-64655167 None:intergenic 35.0%
TTTGGATGTTTAGAAGGGAA+GGG - chr5_4:64655367-64655386 None:intergenic 35.0%
!! GCTTTGTTTGGATGTTTAGA+AGG - chr5_4:64655373-64655392 None:intergenic 35.0%
AAACATCCAAACAAAGCCTT+AGG + chr5_4:64655376-64655395 Msa0864320:intron 35.0%
TACCAATGTAGGTTTGTCAA+TGG + chr5_4:64655495-64655514 Msa0864320:intron 35.0%
TTCCATTGACAAACCTACAT+TGG - chr5_4:64655500-64655519 None:intergenic 35.0%
! TATTTTGCATCGCAACACAA+CGG + chr5_4:64655686-64655705 Msa0864320:CDS 35.0%
ACAATTCAGGCATAGATGTG+AGG - chr5_4:64646830-64646849 None:intergenic 40.0%
!! CGAAAGGTTCACAGTTTTGT+GGG - chr5_4:64646916-64646935 None:intergenic 40.0%
!! TTGATGGGGCAGGTTTTATA+TGG + chr5_4:64647334-64647353 Msa0864320:intron 40.0%
TGGTCCTGTTCAATTTGCAT+TGG + chr5_4:64647776-64647795 Msa0864320:intron 40.0%
TGTGTGTGTGTGTGTGAAAT+TGG + chr5_4:64648054-64648073 Msa0864320:intron 40.0%
TGTGTGTGTGTGAAATTGGT+AGG + chr5_4:64648058-64648077 Msa0864320:intron 40.0%
!! GACTACATTGGTTCAAGGTT+TGG + chr5_4:64648120-64648139 Msa0864320:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr5_4:64648464-64648483 None:intergenic 40.0%
! AGTGTTGTTGTCATGAGTGT+TGG - chr5_4:64649053-64649072 None:intergenic 40.0%
! CTTTTGACACTCAGGAAACT+TGG - chr5_4:64649125-64649144 None:intergenic 40.0%
AAGCCATTATTCGTCGATGA+TGG + chr5_4:64649142-64649161 Msa0864320:CDS 40.0%
TCTCCATCATCGACGAATAA+TGG - chr5_4:64649148-64649167 None:intergenic 40.0%
GATTCAAAGGTTTATCAGGG+TGG + chr5_4:64649202-64649221 Msa0864320:CDS 40.0%
CTAGTTGAGAGTAGGAGAAT+TGG + chr5_4:64649316-64649335 Msa0864320:CDS 40.0%
! CTAATTCCCCTGACTTTTTG+CGG - chr5_4:64649582-64649601 None:intergenic 40.0%
ACGAAGAGACATTACGAGTA+TGG + chr5_4:64649644-64649663 Msa0864320:CDS 40.0%
GATCAAGTGCATACTGTTCA+AGG + chr5_4:64649772-64649791 Msa0864320:CDS 40.0%
ACAGAGCATAGCATACAATG+TGG - chr5_4:64649992-64650011 None:intergenic 40.0%
GTGATAGACGATTCTTACCA+TGG + chr5_4:64650251-64650270 Msa0864320:CDS 40.0%
AGACGATTCTTACCATGGAA+AGG + chr5_4:64650256-64650275 Msa0864320:CDS 40.0%
ATGTGTCTGACCATTTGTCA+AGG + chr5_4:64650320-64650339 Msa0864320:CDS 40.0%
GTGACATAAATGCAGAGCTT+TGG - chr5_4:64650414-64650433 None:intergenic 40.0%
ATAGTTCGTGTTCCATAGAG+AGG + chr5_4:64650596-64650615 Msa0864320:CDS 40.0%
AGAATCTGAGTTCCTCTCTA+TGG - chr5_4:64650611-64650630 None:intergenic 40.0%
ATCATGCGAACTCTGTTGAT+TGG + chr5_4:64650776-64650795 Msa0864320:CDS 40.0%
! TCATGCGAACTCTGTTGATT+GGG + chr5_4:64650777-64650796 Msa0864320:CDS 40.0%
ATATTTGTAGCGTGCACTGA+AGG + chr5_4:64650966-64650985 Msa0864320:intron 40.0%
TATTTGTAGCGTGCACTGAA+GGG + chr5_4:64650967-64650986 Msa0864320:intron 40.0%
TGGACGAATTGTTGTACGAT+TGG + chr5_4:64651378-64651397 Msa0864320:CDS 40.0%
GGACGAATTGTTGTACGATT+GGG + chr5_4:64651379-64651398 Msa0864320:CDS 40.0%
GAATTGTTGTACGATTGGGA+TGG + chr5_4:64651383-64651402 Msa0864320:CDS 40.0%
! TCGGACAAGCATTGCAATTT+GGG - chr5_4:64651849-64651868 None:intergenic 40.0%
! ATCGGACAAGCATTGCAATT+TGG - chr5_4:64651850-64651869 None:intergenic 40.0%
!!! GATTGATCTGTGGTTGGTTT+TGG - chr5_4:64652308-64652327 None:intergenic 40.0%
! TGCATTGGCATGATCCATTT+GGG - chr5_4:64652342-64652361 None:intergenic 40.0%
! ATGCATTGGCATGATCCATT+TGG - chr5_4:64652343-64652362 None:intergenic 40.0%
TGAGAGTGACGAAGATATTG+AGG + chr5_4:64652523-64652542 Msa0864320:CDS 40.0%
! ATTGTGAAGCATTAACGCCA+TGG - chr5_4:64652625-64652644 None:intergenic 40.0%
! GTGCTTTAAGTGGATGTGTT+TGG + chr5_4:64653166-64653185 Msa0864320:intron 40.0%
!!! GCCTGAAAACTGTTGCTTTT+TGG + chr5_4:64653224-64653243 Msa0864320:intron 40.0%
! GCCAAAAAGCAACAGTTTTC+AGG - chr5_4:64653228-64653247 None:intergenic 40.0%
TCTGTTCAGTTATGTCCTCA+CGG + chr5_4:64653525-64653544 Msa0864320:intron 40.0%
CCATACAACCAGAAGATAAG+GGG - chr5_4:64653689-64653708 None:intergenic 40.0%
GCCATACAACCAGAAGATAA+GGG - chr5_4:64653690-64653709 None:intergenic 40.0%
AGCCATACAACCAGAAGATA+AGG - chr5_4:64653691-64653710 None:intergenic 40.0%
!! ATAAACACAGAAGGAGTACC+TGG - chr5_4:64653715-64653734 None:intergenic 40.0%
TAAAGCCGATCTAGAAAGCT+CGG + chr5_4:64653913-64653932 Msa0864320:intron 40.0%
AGTCAGACTGAAACAGTTCT+TGG + chr5_4:64653974-64653993 Msa0864320:CDS 40.0%
AACAGTTCTTGGAACACTTC+TGG + chr5_4:64653985-64654004 Msa0864320:CDS 40.0%
! GGTCCATTATCCCATACTTT+TGG - chr5_4:64654871-64654890 None:intergenic 40.0%
!! AGTTCTGAAGGCACTTGTTA+AGG + chr5_4:64654931-64654950 Msa0864320:intron 40.0%
!!! GGGGTGGGTTTTGAAAAAAA+AGG + chr5_4:64655044-64655063 Msa0864320:intron 40.0%
! TTAGGAGGAGAAGATTTTGG+AGG + chr5_4:64655096-64655115 Msa0864320:intron 40.0%
! TAGGAGGAGAAGATTTTGGA+GGG + chr5_4:64655097-64655116 Msa0864320:intron 40.0%
GTTTGGATGTTTAGAAGGGA+AGG - chr5_4:64655368-64655387 None:intergenic 40.0%
!! AAGTGTCCTAAGGCTTTGTT+TGG - chr5_4:64655385-64655404 None:intergenic 40.0%
! GCGAAAGGTTCACAGTTTTG+TGG - chr5_4:64646917-64646936 None:intergenic 45.0%
! GCTGCGGTGAGTATTTCTTT+TGG - chr5_4:64648214-64648233 None:intergenic 45.0%
GAAGCTCAATTGGTGAGTTG+AGG - chr5_4:64648335-64648354 None:intergenic 45.0%
CGCTCTTTCTTATCCATGCA+AGG + chr5_4:64648620-64648639 Msa0864320:intron 45.0%
GGATATGGAGACACCACTTT+AGG - chr5_4:64648941-64648960 None:intergenic 45.0%
!!! TTTTGGAGTGTCGTTGCTTC+CGG - chr5_4:64648987-64649006 None:intergenic 45.0%
! TGCTTCGGAGTTGAAGGTTT+TGG - chr5_4:64649004-64649023 None:intergenic 45.0%
!! GTTGTTGTCATGAGTGTTGG+CGG - chr5_4:64649050-64649069 None:intergenic 45.0%
! TGCTTCGGAGTTGAAGGTTT+TGG - chr5_4:64649004-64649023 None:intergenic 45.0%
! TGGACACAATTTTGGGCAGA+AGG + chr5_4:64649463-64649482 Msa0864320:CDS 45.0%
AGAGATGTCCGCAAAAAGTC+AGG + chr5_4:64649571-64649590 Msa0864320:CDS 45.0%
GAGATGTCCGCAAAAAGTCA+GGG + chr5_4:64649572-64649591 Msa0864320:CDS 45.0%
AGATGTCCGCAAAAAGTCAG+GGG + chr5_4:64649573-64649592 Msa0864320:CDS 45.0%
AGGACCCATGGACAAATTTC+AGG + chr5_4:64649910-64649929 Msa0864320:intron 45.0%
TATGCTATGCTCTGTTCGAC+TGG + chr5_4:64649997-64650016 Msa0864320:intron 45.0%
! ACCATGGAAAGGCTCAGTTT+TGG + chr5_4:64650267-64650286 Msa0864320:CDS 45.0%
TCCAAAACTGAGCCTTTCCA+TGG - chr5_4:64650271-64650290 None:intergenic 45.0%
!!! AGGCTCAGTTTTGGATTCTG+TGG + chr5_4:64650276-64650295 Msa0864320:CDS 45.0%
!!! GGCTCAGTTTTGGATTCTGT+GGG + chr5_4:64650277-64650296 Msa0864320:CDS 45.0%
!!! TCAGTTTTGGATTCTGTGGG+TGG + chr5_4:64650280-64650299 Msa0864320:CDS 45.0%
! CATTTATGTCACTTGCTGCG+AGG + chr5_4:64650422-64650441 Msa0864320:CDS 45.0%
GGAACTCAGATTCTCGTAGT+AGG + chr5_4:64650617-64650636 Msa0864320:CDS 45.0%
ACTCAGATTCTCGTAGTAGG+AGG + chr5_4:64650620-64650639 Msa0864320:CDS 45.0%
GCTGAAGCTATTGAAAAGCG+TGG + chr5_4:64650832-64650851 Msa0864320:CDS 45.0%
! TGGACTGGGTTTGAAAAGTG+TGG + chr5_4:64651194-64651213 Msa0864320:CDS 45.0%
TTGCAATGCTTGTCCGATGA+AGG + chr5_4:64651852-64651871 Msa0864320:CDS 45.0%
!!! TGTGGTTGGTTTTGGTGGTA+AGG - chr5_4:64652300-64652319 None:intergenic 45.0%
!!! TGATCTGTGGTTGGTTTTGG+TGG - chr5_4:64652305-64652324 None:intergenic 45.0%
GATGCGGGCATCTCAATTAT+AGG - chr5_4:64652443-64652462 None:intergenic 45.0%
TAATCACCCTCTTCTAGCAG+AGG + chr5_4:64653549-64653568 Msa0864320:CDS 45.0%
GATGGATCATCATGTTCTCG+TGG - chr5_4:64653667-64653686 None:intergenic 45.0%
TGATCCATCCCCTTATCTTC+TGG + chr5_4:64653678-64653697 Msa0864320:CDS 45.0%
ACAACCAGAAGATAAGGGGA+TGG - chr5_4:64653685-64653704 None:intergenic 45.0%
! CCCCTTATCTTCTGGTTGTA+TGG + chr5_4:64653686-64653705 Msa0864320:CDS 45.0%
AAAGCCGATCTAGAAAGCTC+GGG + chr5_4:64653914-64653933 Msa0864320:intron 45.0%
!! AAGCAAGACTGACTTGCATG+AGG + chr5_4:64653943-64653962 Msa0864320:CDS 45.0%
! AGAGCCCGTTTTCCTTTGAA+TGG + chr5_4:64654115-64654134 Msa0864320:CDS 45.0%
!! TCTCGTCATTGATGATGTCC+CGG - chr5_4:64654344-64654363 None:intergenic 45.0%
TAGAGCGGTCAAATGGATCA+AGG + chr5_4:64654796-64654815 Msa0864320:intron 45.0%
!! GATAGCCTTGTTTGCGAGTT+TGG + chr5_4:64655010-64655029 Msa0864320:intron 45.0%
TTTAGAAGGGAAGGGAAGAG+AGG - chr5_4:64655359-64655378 None:intergenic 45.0%
!!! AAATTTTTATAATAATAAAG+TGG + chr5_4:64647524-64647543 Msa0864320:intron 5.0%
!! AAAAAAAAAAAAAAACTTTA+CGG - chr5_4:64651468-64651487 None:intergenic 5.0%
!! TAAATAAATACAATAAAAAA+GGG - chr5_4:64653110-64653129 None:intergenic 5.0%
!! ATAAATAAATACAATAAAAA+AGG - chr5_4:64653111-64653130 None:intergenic 5.0%
!!! TTTTATTTGTAAAAAAAATT+GGG - chr5_4:64654043-64654062 None:intergenic 5.0%
!!! AATTTTTTTTACAAATAAAA+GGG + chr5_4:64654043-64654062 Msa0864320:intron 5.0%
!!! ATTTTAAGATAAATAAATAA+CGG + chr5_4:64654494-64654513 Msa0864320:intron 5.0%
!! AATAAATATTAAATAGTAAA+TGG - chr5_4:64654638-64654657 None:intergenic 5.0%
CGAGCTGATGTTTCGTCTCA+AGG + chr5_4:64646779-64646798 Msa0864320:CDS 50.0%
TAGATGTGAGGCGAGGCATA+GGG - chr5_4:64646818-64646837 None:intergenic 50.0%
ATAGATGTGAGGCGAGGCAT+AGG - chr5_4:64646819-64646838 None:intergenic 50.0%
GAACCACATGCTTCACACGT+TGG + chr5_4:64646973-64646992 Msa0864320:intron 50.0%
CTTCCAACGTGTGAAGCATG+TGG - chr5_4:64646979-64646998 None:intergenic 50.0%
CACTAATCACTTGATGGGGC+AGG + chr5_4:64647324-64647343 Msa0864320:intron 50.0%
!! TTTGGAGTGTCGTTGCTTCC+GGG - chr5_4:64648986-64649005 None:intergenic 50.0%
AACCTTCAACTCCGAAGCAG+AGG + chr5_4:64649005-64649024 Msa0864320:CDS 50.0%
TTCCTCTGCTTCGGAGTTGA+AGG - chr5_4:64649010-64649029 None:intergenic 50.0%
AACCTTCAACTCCGAAGCAG+AGG + chr5_4:64649005-64649024 Msa0864320:CDS 50.0%
TTCCTCTGCTTCGGAGTTGA+AGG - chr5_4:64649010-64649029 None:intergenic 50.0%
ATCTCTGGCCCTTTGCAAAC+GGG - chr5_4:64649414-64649433 None:intergenic 50.0%
GATCTCTGGCCCTTTGCAAA+CGG - chr5_4:64649415-64649434 None:intergenic 50.0%
GCGTGCACTGAAGGGATTTA+TGG + chr5_4:64650975-64650994 Msa0864320:intron 50.0%
CTTTCATGTTCGGGTGATGC+GGG - chr5_4:64652458-64652477 None:intergenic 50.0%
GCTTTCATGTTCGGGTGATG+CGG - chr5_4:64652459-64652478 None:intergenic 50.0%
TCATCATGCCTGCCGATGTA+TGG + chr5_4:64652578-64652597 Msa0864320:CDS 50.0%
GAAGAGGGTGATTATCCGTG+AGG - chr5_4:64653543-64653562 None:intergenic 50.0%
CACCTACCTCTGCTAGAAGA+GGG - chr5_4:64653558-64653577 None:intergenic 50.0%
ACACCTACCTCTGCTAGAAG+AGG - chr5_4:64653559-64653578 None:intergenic 50.0%
GGATCATCATGTTCTCGTGG+AGG - chr5_4:64653664-64653683 None:intergenic 50.0%
TTCGCCCGAGCTTTCTAGAT+CGG - chr5_4:64653921-64653940 None:intergenic 50.0%
! AACGGGCTCTCATTGCAGTT+CGG - chr5_4:64654105-64654124 None:intergenic 50.0%
GGGACATCATCAATGACGAG+AGG + chr5_4:64654343-64654362 Msa0864320:CDS 50.0%
!! AGCCTTGTTTGCGAGTTTGG+AGG + chr5_4:64655013-64655032 Msa0864320:intron 50.0%
!! GCCTTGTTTGCGAGTTTGGA+GGG + chr5_4:64655014-64655033 Msa0864320:intron 50.0%
! CCTTGTTTGCGAGTTTGGAG+GGG + chr5_4:64655015-64655034 Msa0864320:intron 50.0%
! ACACAGCCCTCCTCATTTTG+AGG + chr5_4:64655138-64655157 Msa0864320:intron 50.0%
GCAACACAACGGACAGACTT+AGG + chr5_4:64655697-64655716 Msa0864320:CDS 50.0%
TCAGGCATAGATGTGAGGCG+AGG - chr5_4:64646825-64646844 None:intergenic 55.0%
AAGTTACCCACGCACAGCTG+CGG - chr5_4:64648230-64648249 None:intergenic 55.0%
ACTCTTGCCCCCGTTTGCAA+AGG + chr5_4:64649402-64649421 Msa0864320:CDS 55.0%
CTCTTGCCCCCGTTTGCAAA+GGG + chr5_4:64649403-64649422 Msa0864320:CDS 55.0%
TCTCTGGCCCTTTGCAAACG+GGG - chr5_4:64649413-64649432 None:intergenic 55.0%
GCTATGCTCTGTTCGACTGG+TGG + chr5_4:64650000-64650019 Msa0864320:intron 55.0%
ATGCTCTGTTCGACTGGTGG+TGG + chr5_4:64650003-64650022 Msa0864320:intron 55.0%
CACCCTCTTCTAGCAGAGGT+AGG + chr5_4:64653553-64653572 Msa0864320:intron 55.0%
! CTTCTGGTTGTATGGCTGCC+AGG + chr5_4:64653694-64653713 Msa0864320:CDS 55.0%
GCTCTCATTGCAGTTCGGAC+TGG - chr5_4:64654100-64654119 None:intergenic 55.0%
CCCCTCCAAACTCGCAAACA+AGG - chr5_4:64655018-64655037 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr5_4:64655019-64655038 Msa0864320:intron 55.0%
CGAGTTTGGAGGGGAAGGAA+GGG + chr5_4:64655024-64655043 Msa0864320:intron 55.0%
GAGTTTGGAGGGGAAGGAAG+GGG + chr5_4:64655025-64655044 Msa0864320:intron 55.0%
! GAAGGGAAGAGAGGCTTTGG+GGG - chr5_4:64655350-64655369 None:intergenic 55.0%
GGAAGGGAAGAGAGGCTTTG+GGG - chr5_4:64655351-64655370 None:intergenic 55.0%
GGGAAGGGAAGAGAGGCTTT+GGG - chr5_4:64655352-64655371 None:intergenic 55.0%
AGGGAAGGGAAGAGAGGCTT+TGG - chr5_4:64655353-64655372 None:intergenic 55.0%
TGTGAGGCGAGGCATAGGGA+GGG - chr5_4:64646814-64646833 None:intergenic 60.0%
ATGTGAGGCGAGGCATAGGG+AGG - chr5_4:64646815-64646834 None:intergenic 60.0%
ATACTCACCGCAGCTGTGCG+TGG + chr5_4:64648220-64648239 Msa0864320:intron 60.0%
TACTCACCGCAGCTGTGCGT+GGG + chr5_4:64648221-64648240 Msa0864320:intron 60.0%
! GAGTGTCGTTGCTTCCGGGA+TGG - chr5_4:64648982-64649001 None:intergenic 60.0%
CTCTGGCCCTTTGCAAACGG+GGG - chr5_4:64649412-64649431 None:intergenic 60.0%
GCGAGTTTGGAGGGGAAGGA+AGG + chr5_4:64655023-64655042 Msa0864320:intron 60.0%
TTTGGAGGGGAAGGAAGGGG+TGG + chr5_4:64655028-64655047 Msa0864320:intron 60.0%
TTGGAGGGGAAGGAAGGGGT+GGG + chr5_4:64655029-64655048 Msa0864320:intron 60.0%
!! GGGAAGAGAGGCTTTGGGGG+TGG - chr5_4:64655347-64655366 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 64646737 64655740 64646737 ID=Msa0864320;Name=Msa0864320
chr5_4 mRNA 64646737 64655740 64646737 ID=Msa0864320-mRNA-1;Parent=Msa0864320;Name=Msa0864320-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|0.29|0.16|0.94|1|1|18|0|988
chr5_4 exon 64646737 64646800 64646737 ID=Msa0864320-mRNA-1:exon:20335;Parent=Msa0864320-mRNA-1
chr5_4 exon 64648858 64649793 64648858 ID=Msa0864320-mRNA-1:exon:20336;Parent=Msa0864320-mRNA-1
chr5_4 exon 64650251 64650341 64650251 ID=Msa0864320-mRNA-1:exon:20337;Parent=Msa0864320-mRNA-1
chr5_4 exon 64650417 64650885 64650417 ID=Msa0864320-mRNA-1:exon:20338;Parent=Msa0864320-mRNA-1
chr5_4 exon 64650976 64651055 64650976 ID=Msa0864320-mRNA-1:exon:20339;Parent=Msa0864320-mRNA-1
chr5_4 exon 64651173 64651257 64651173 ID=Msa0864320-mRNA-1:exon:20340;Parent=Msa0864320-mRNA-1
chr5_4 exon 64651364 64651455 64651364 ID=Msa0864320-mRNA-1:exon:20341;Parent=Msa0864320-mRNA-1
chr5_4 exon 64651562 64651630 64651562 ID=Msa0864320-mRNA-1:exon:20342;Parent=Msa0864320-mRNA-1
chr5_4 exon 64651712 64651748 64651712 ID=Msa0864320-mRNA-1:exon:20343;Parent=Msa0864320-mRNA-1
chr5_4 exon 64651826 64651908 64651826 ID=Msa0864320-mRNA-1:exon:20344;Parent=Msa0864320-mRNA-1
chr5_4 exon 64652286 64652729 64652286 ID=Msa0864320-mRNA-1:exon:20345;Parent=Msa0864320-mRNA-1
chr5_4 exon 64653534 64653570 64653534 ID=Msa0864320-mRNA-1:exon:20346;Parent=Msa0864320-mRNA-1
chr5_4 exon 64653658 64653715 64653658 ID=Msa0864320-mRNA-1:exon:20347;Parent=Msa0864320-mRNA-1
chr5_4 exon 64653918 64654006 64653918 ID=Msa0864320-mRNA-1:exon:20348;Parent=Msa0864320-mRNA-1
chr5_4 exon 64654094 64654159 64654094 ID=Msa0864320-mRNA-1:exon:20349;Parent=Msa0864320-mRNA-1
chr5_4 exon 64654250 64654364 64654250 ID=Msa0864320-mRNA-1:exon:20350;Parent=Msa0864320-mRNA-1
chr5_4 exon 64655506 64655544 64655506 ID=Msa0864320-mRNA-1:exon:20351;Parent=Msa0864320-mRNA-1
chr5_4 exon 64655628 64655740 64655628 ID=Msa0864320-mRNA-1:exon:20352;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64646737 64646800 64646737 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64648858 64649793 64648858 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64650251 64650341 64650251 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64650417 64650885 64650417 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64650976 64651055 64650976 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64651173 64651257 64651173 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64651364 64651455 64651364 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64651562 64651630 64651562 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64651712 64651748 64651712 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64651826 64651908 64651826 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64652286 64652729 64652286 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64653534 64653570 64653534 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64653658 64653715 64653658 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64653918 64654006 64653918 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64654094 64654159 64654094 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64654250 64654364 64654250 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64655506 64655544 64655506 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
chr5_4 CDS 64655628 64655740 64655628 ID=Msa0864320-mRNA-1:cds;Parent=Msa0864320-mRNA-1
Gene Sequence

>Msa0864320

ATGAGTAGCTCAGACAACTTGTTCAACAATGAAGATCAGATACGAGCTGATGTTTCGTCTCAAGGGTCATTAAATAAAAGGAAGAATAGCCAAAATGATGTTAATGATCAGCCGCAAAAAACAGTTAAAAGGAAGAAATATCAACCTAAAGTGGTGTCTCCATATCCAGAGAAATTAAAGAAATTCCATCCCGGAAGCAACGACACTCCAAAACCTTCAACTCCGAAGCAGAGGAAAAGTTATGTTAGAAAGACCGCCAACACTCATGACAACAACACTCCAAAACCTTCAACTCCGAAGCAGAGGAAAAGTTATGTTAGAAAGATTGCCAAGTTTCCTGAGTGTCAAAAGCCATTATTCGTCGATGATGGAGATTCCATCTCTTTCCCATTTTTGGAATATTTCAAAGATTCAAAGGTTTATCAGGGTGGATTTGAAAATTCAACTATAACTAATGAATCTGCCATCGTATACAATTCGGTACAAAGTTATCAGAAAATGACTTCATTGTCAGGTTTATGTCTAGTTGAGAGTAGGAGAATTGGACAAAATTTTCCAATAATGTGTAAAAGGAAAAGAGTTAGAAGAGAAAGAATAAGTTTGGTAAAACTCTTGCCCCCGTTTGCAAAGGGCCAGAGATCAAAAAGTTTTGTTACGAAGAGAAAATGTTGGACACAATTTTGGGCAGAAGGAAATTCTACAACCAGCCAAAAAATGAGATCTTTGATAAAGAAAATTATTTCCTTGAAGAAAAAAATGCATCGAAAGAAAAATAAGAGAGATGTCCGCAAAAAGTCAGGGGAATTAGTTCTTTATAATCGACCATCATCAAAAGTTGAAGTAATGCTTGACGAAGAGACATTACGAGTATGGAATTTGCTCGTTGTTGAAAACAAACATGAAGAGAATGATGAACATAAGAGGAGGTATTGGGAGATGATAAGAAAACTCTACCATAAAATGGTGATATCATTCTTAGATCAAGTGCATACTGTTCAAGGTGATAGACGATTCTTACCATGGAAAGGCTCAGTTTTGGATTCTGTGGGTGGAGTTTTCTTAACTCAAAATGTGTCTGACCATTTGTCAAGCTCTGCATTTATGTCACTTGCTGCGAGGTTCCCTGTCAAATTAGTTAGCGATGAGCAAAACAAAAACATGGTTTTATCAGATCCTAAATCTGATAATAAAATGAATGATAGAAAATTTGAAGAAACAGAAGCTCAGAAAGCTAACGAATCTTCCAAAGTTGATGACAAAGAAATTGAAAATAGTTCGTGTTCCATAGAGAGGAACTCAGATTCTCGTAGTAGGAGGAAACAAATAGACAATAAAAAGAAGAGTAAGAAACAGGAGGAAAAAGATATACTTGAAAAGAAAATATTGGAAAAGAAAATGCAACATTGGGAAACACTAAGAAAAATCCACTCTAAAAGTGATCAACACATTGATCATGCGAACTCTGTTGATTGGGAAGCAGTAAGAGATGCAGATGTTGATGAAGTTGCTGAAGCTATTGAAAAGCGTGGTCAACAACACATAATTGCTTATAAAATTCAGCGTGCACTGAAGGGATTTATGGATAACCATGGAAGCATGAATTTAGAATGGTTAAAAGATATTCCACCAAATGAAGCAAAGGAATATTTTTTGAGCATATATGGACTGGGTTTGAAAAGTGTGGAATGTTTAAGACTTTTAACTCTTCAACATATTTCTTTTCCGGTGGATGTAAATGTTGGACGAATTGTTGTACGATTGGGATGGGTCCCTTTACAACCATTACCAGAATCAATTCAAATACATAATTTAGAGAAGTTTCCGGATCCAATCAAAATTCAACAATATCTTTGGCCAAGACTATGCAAACTTGATCATCATACATTGTATGAATTGCATTATCAGTTGATAACCTTTGGAAAGGTTTTTTGCACTAAGAGAAACCCAAATTGCAATGCTTGTCCGATGAAGGACGAATGTAAATATTATGCAAGTTCTCTTGCAAGGACAAAACTTGCCTTACCACCAAAACCAACCACAGATCAATCAATTGTAGCAACCCAAATGGATCATGCCAATGCATATTGTTTCCCATACTCTGATAATTGTTGGAGCAATTCTACATCAACATTATTTACTAAAGAAAGTAAAGAATGTGAACCTATAATTGAGATGCCCGCATCACCCGAACATGAAAGCACATCATTGATTGATGATGAAGAGATTTACCATGATTATACTTATGAGAGTGACGAAGATATTGAGGATATTCCAACATTTAACTTCAGCAGTCAAGAATCATCATGCCTGCCGATGTATGGTAATTTTTTTGAAGAGTTTGACCATGGCGTTAATGCTTCACAATCTTTAGTTGCATTTCATCCAAATGCTACAAACAGTCATTTATCAAAAATGAAAAATGCTAGTCGCTTGAAAACTGAGCGCACAGTTTATGTCCTCACGGATAATCACCCTCTTCTAGCAGAGTATCCTCCACGAGAACATGATGATCCATCCCCTTATCTTCTGGTTGTATGGCTGCCAGCCGATCTAGAAAGCTCGGGCGAATCAAGCAAGACTGACTTGCATGAGGAAGAGAGTAGTCAGACTGAAACAGTTCTTGGAACACTTCTGATACCAGTCCGAACTGCAATGAGAGCCCGTTTTCCTTTGAATGGAACATACTTTCAAGTTAATGAGGTTTTTGCTGATTATGCTTCAATGAAACAACCAATTAATGTTCCTAGAAAATGGATATGGAATCTAAAGAAACAGATAGCATATTTTGGTACCGGGACATCATCAATGACGAGAGGTTTGTCAATGGAAGAAATTAAAGACTTCTTTTGCAAAGGGTTCATTTGTGTGAGAGCAATTGATACAAAAACAGGAGCTCCAAGACCTATATCATCTATTTTGCATCGCAACACAACGGACAGACTTAGGAAGAAACAAAATGCCAAATGA

Protein sequence

>Msa0864320

MSSSDNLFNNEDQIRADVSSQGSLNKRKNSQNDVNDQPQKTVKRKKYQPKVVSPYPEKLKKFHPGSNDTPKPSTPKQRKSYVRKTANTHDNNTPKPSTPKQRKSYVRKIAKFPECQKPLFVDDGDSISFPFLEYFKDSKVYQGGFENSTITNESAIVYNSVQSYQKMTSLSGLCLVESRRIGQNFPIMCKRKRVRRERISLVKLLPPFAKGQRSKSFVTKRKCWTQFWAEGNSTTSQKMRSLIKKIISLKKKMHRKKNKRDVRKKSGELVLYNRPSSKVEVMLDEETLRVWNLLVVENKHEENDEHKRRYWEMIRKLYHKMVISFLDQVHTVQGDRRFLPWKGSVLDSVGGVFLTQNVSDHLSSSAFMSLAARFPVKLVSDEQNKNMVLSDPKSDNKMNDRKFEETEAQKANESSKVDDKEIENSSCSIERNSDSRSRRKQIDNKKKSKKQEEKDILEKKILEKKMQHWETLRKIHSKSDQHIDHANSVDWEAVRDADVDEVAEAIEKRGQQHIIAYKIQRALKGFMDNHGSMNLEWLKDIPPNEAKEYFLSIYGLGLKSVECLRLLTLQHISFPVDVNVGRIVVRLGWVPLQPLPESIQIHNLEKFPDPIKIQQYLWPRLCKLDHHTLYELHYQLITFGKVFCTKRNPNCNACPMKDECKYYASSLARTKLALPPKPTTDQSIVATQMDHANAYCFPYSDNCWSNSTSTLFTKESKECEPIIEMPASPEHESTSLIDDEEIYHDYTYESDEDIEDIPTFNFSSQESSCLPMYGNFFEEFDHGVNASQSLVAFHPNATNSHLSKMKNASRLKTERTVYVLTDNHPLLAEYPPREHDDPSPYLLVVWLPADLESSGESSKTDLHEEESSQTETVLGTLLIPVRTAMRARFPLNGTYFQVNEVFADYASMKQPINVPRKWIWNLKKQIAYFGTGTSSMTRGLSMEEIKDFFCKGFICVRAIDTKTGAPRPISSILHRNTTDRLRKKQNAK*