Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747340 | XP_003617915.2 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747340 | sp|F4HQM3|NCER1_ARATH | 74.131 | 777 | 196 | 4 | 6 | 777 | 3 | 779 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747340 | G7K4V4 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035250 | Msa0747340 | 0.803910 | 2.781965e-49 | -8.615850e-47 |
Msa0747340 | Msa0788300 | 0.882279 | 1.190612e-70 | -8.615850e-47 |
Msa0747340 | Msa0825540 | 0.998640 | 2.222123e-271 | -8.615850e-47 |
Msa0747340 | Msa0864580 | 0.993434 | 1.034697e-199 | -8.615850e-47 |
Msa0747340 | Msa1384660 | 0.998650 | 1.018478e-271 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747340 | MtrunA17_Chr5g0447261 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Msa0747340 | MtrunA17_Chr3g0103491 | 75.679 | 810 | 161 | 4 | 1 | 776 | 1 | 808 | 0.0 | 1260 |
Msa0747340 | MtrunA17_Chr3g0118451 | 58.155 | 748 | 248 | 11 | 37 | 776 | 23 | 713 | 0.0 | 849 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747340 | AT1G07380.2 | 74.103 | 780 | 194 | 5 | 6 | 777 | 1 | 780 | 0.0 | 1193 |
Msa0747340 | AT1G07380.1 | 74.131 | 777 | 196 | 4 | 6 | 777 | 3 | 779 | 0.0 | 1192 |
Msa0747340 | AT2G38010.3 | 73.919 | 740 | 181 | 5 | 40 | 776 | 26 | 756 | 0.0 | 1141 |
Msa0747340 | AT2G38010.1 | 73.919 | 740 | 181 | 5 | 40 | 776 | 26 | 756 | 0.0 | 1140 |
Msa0747340 | AT2G38010.2 | 70.581 | 775 | 181 | 6 | 40 | 776 | 26 | 791 | 0.0 | 1122 |
Msa0747340 | AT5G58980.1 | 71.930 | 741 | 169 | 8 | 39 | 776 | 28 | 732 | 0.0 | 1102 |
Find 240 sgRNAs with CRISPR-Local
Find 489 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATTATTAATATATAATT+TGG | 0.069131 | 5_1:-71056407 | Msa0747340:three_prime_UTR |
TGAATGAAGGTTCCTAATTT+TGG | 0.113917 | 5_1:+71062926 | None:intergenic |
TGTATCAGGGGAACCCTTTC+TGG | 0.155421 | 5_1:-71058685 | Msa0747340:intron |
GGAGCTGCAAAGGGTTTATT+AGG | 0.162179 | 5_1:-71056533 | Msa0747340:CDS |
ACCCCTCTTGGTGCAAGTTT+TGG | 0.167335 | 5_1:-71056845 | Msa0747340:CDS |
GGGTGCTGCTGCACGATTTA+TGG | 0.180402 | 5_1:-71060143 | Msa0747340:CDS |
ATTAATTAGTGGGGATAATA+AGG | 0.182190 | 5_1:-71060164 | Msa0747340:CDS |
TAGGGTGCTTCCACACTTTA+TGG | 0.192040 | 5_1:-71057013 | Msa0747340:CDS |
CTTGGAAAATTGGTCTTTCT+TGG | 0.231444 | 5_1:-71061985 | Msa0747340:five_prime_UTR |
AACCGTATCACCTCTCTTAA+AGG | 0.249905 | 5_1:+71056790 | None:intergenic |
ACTGCCCAATTCGGAGGATT+TGG | 0.253488 | 5_1:+71058128 | None:intergenic |
TTGCATCTGGGGTTCACTTT+AGG | 0.253795 | 5_1:-71061735 | Msa0747340:CDS |
AGGATCAATATTTGTCAATA+AGG | 0.253952 | 5_1:-71060947 | Msa0747340:CDS |
AAGCATGCAATTCCAAAATT+AGG | 0.262551 | 5_1:-71062938 | None:intergenic |
TCACCAGTATCAAGCAAAAT+AGG | 0.268049 | 5_1:+71058599 | None:intergenic |
GGGTCAATTCGTCACTTTAC+AGG | 0.270731 | 5_1:-71056512 | Msa0747340:CDS |
TTTGAAAGTACACGTATTAT+AGG | 0.273468 | 5_1:-71059015 | Msa0747340:CDS |
TGCCCTGCTGCAATGGGATT+TGG | 0.283733 | 5_1:-71058844 | Msa0747340:CDS |
GTATACAGAATAAAACATTT+TGG | 0.293949 | 5_1:-71056554 | Msa0747340:CDS |
TTGAAAGTACACGTATTATA+GGG | 0.295150 | 5_1:-71059014 | Msa0747340:CDS |
AATACGATAAATAAATAAAT+AGG | 0.312744 | 5_1:-71062903 | Msa0747340:five_prime_UTR |
CACTCTCTAACTTGAATGTT+TGG | 0.315163 | 5_1:-71061921 | Msa0747340:CDS |
ATTCACACCCATGCTGGTCC+TGG | 0.316768 | 5_1:-71061090 | Msa0747340:CDS |
CCAGGAGGTCTGGTGGTTGC+GGG | 0.317859 | 5_1:+71056909 | None:intergenic |
TTCTAGCAGTGGAGCTTCTA+AGG | 0.320178 | 5_1:-71058878 | Msa0747340:CDS |
ACCGGCTAAGCTTGGAAAAT+TGG | 0.327940 | 5_1:-71061995 | Msa0747340:five_prime_UTR |
AACATTCATGTTGTTATAGC+AGG | 0.333161 | 5_1:-71057513 | Msa0747340:CDS |
CGTGTACTTTCAAATTCATC+TGG | 0.337017 | 5_1:+71059024 | None:intergenic |
TAGGTTTGTTAACCTGTCTA+AGG | 0.340793 | 5_1:+71059299 | None:intergenic |
TCTAGCAACACTTGAAGTTT+TGG | 0.340869 | 5_1:+71059336 | None:intergenic |
GGAGCATCTGAACAGATTAA+AGG | 0.342606 | 5_1:-71058955 | Msa0747340:CDS |
CCAATCCAAATCCTCCGAAT+TGG | 0.345676 | 5_1:-71058133 | Msa0747340:CDS |
CCCACACTTGCTGCAAGCTT+TGG | 0.346712 | 5_1:-71062739 | Msa0747340:five_prime_UTR |
TTCACACCCATGCTGGTCCT+GGG | 0.349429 | 5_1:-71061089 | Msa0747340:CDS |
AACACAGAGCAGATTGCATC+TGG | 0.359080 | 5_1:-71061748 | Msa0747340:CDS |
TCATTTGATGCCCTTGTTGA+TGG | 0.361338 | 5_1:-71061012 | Msa0747340:CDS |
GAAAATAATGTAGCGATTAG+TGG | 0.362437 | 5_1:-71061114 | Msa0747340:CDS |
GTCCTTCGGGAAGCTTCAAC+TGG | 0.364059 | 5_1:-71060225 | Msa0747340:CDS |
TTATGCTATGGCCGGGGACC+TGG | 0.366600 | 5_1:-71059151 | Msa0747340:CDS |
GATTCATTCTACACGTTCAA+TGG | 0.367273 | 5_1:-71056441 | Msa0747340:three_prime_UTR |
TCCAGGAGGTCTGGTGGTTG+CGG | 0.375652 | 5_1:+71056908 | None:intergenic |
ATCTCCAAGGGAAGGATACT+TGG | 0.377460 | 5_1:-71056697 | Msa0747340:CDS |
TTATTATTAATATATAATTT+GGG | 0.377477 | 5_1:-71056406 | Msa0747340:three_prime_UTR |
ATTTGGATTGGAAGTATAGT+AGG | 0.379596 | 5_1:+71058145 | None:intergenic |
TGTAACTACTTGATTGGTCT+TGG | 0.380743 | 5_1:-71061823 | Msa0747340:CDS |
AAATGAAGCTTCCATATGAT+TGG | 0.381567 | 5_1:-71058577 | Msa0747340:CDS |
TTGCCGAGCCTAAGGGTAAT+AGG | 0.383793 | 5_1:-71061690 | Msa0747340:CDS |
AAAGATCACAACTTTACATC+TGG | 0.384903 | 5_1:-71062688 | Msa0747340:five_prime_UTR |
GGGGAACCCTTTCTGGAAAC+TGG | 0.385318 | 5_1:-71058678 | Msa0747340:CDS |
TGGTACAGATCATGAATTAC+TGG | 0.387161 | 5_1:-71059401 | Msa0747340:intron |
TCTGTAAAGAATTTGTGATA+TGG | 0.389696 | 5_1:+71056288 | None:intergenic |
ATTTGCTTGTCCAGGAGGTC+TGG | 0.390871 | 5_1:+71056899 | None:intergenic |
TTTCTTGGTTGATTTGAACT+TGG | 0.391219 | 5_1:-71061970 | Msa0747340:five_prime_UTR |
CACATTGAGTGCATACATTC+AGG | 0.395769 | 5_1:-71056984 | Msa0747340:CDS |
TGTTAATCTCGATGCTTGTA+TGG | 0.396574 | 5_1:-71061659 | Msa0747340:CDS |
CAAAATGCAGATACAAATCT+AGG | 0.397406 | 5_1:+71059280 | None:intergenic |
CTTACGATTATTATGAAGAC+TGG | 0.397476 | 5_1:+71060030 | None:intergenic |
CAGGCTATTTGTTCCTTGTC+AGG | 0.400770 | 5_1:+71058635 | None:intergenic |
CCCGCAACCACCAGACCTCC+TGG | 0.403471 | 5_1:-71056909 | Msa0747340:CDS |
TGAAGTTTGTTGATGATGAA+TGG | 0.409322 | 5_1:-71060249 | Msa0747340:CDS |
AGGGAAAGAGGAGTGGAGGA+AGG | 0.409423 | 5_1:+71062825 | None:intergenic |
GGGAAAGAGGAGTGGAGGAA+GGG | 0.410269 | 5_1:+71062826 | None:intergenic |
AACGGCCAGCCTGTAGAATC+AGG | 0.412830 | 5_1:-71056932 | Msa0747340:CDS |
CATTGAGAAAAGCATTGTTC+AGG | 0.415604 | 5_1:-71060989 | Msa0747340:CDS |
TTCTTGGTTGATTTGAACTT+GGG | 0.415988 | 5_1:-71061969 | Msa0747340:five_prime_UTR |
GCATATTGTAACTACTTGAT+TGG | 0.417734 | 5_1:-71061829 | Msa0747340:CDS |
TGTGTATATTGTAACATCTC+TGG | 0.423896 | 5_1:-71061049 | Msa0747340:CDS |
CAATCCAAATCCTCCGAATT+GGG | 0.426759 | 5_1:-71058132 | Msa0747340:CDS |
CTGGTCTACCGGGAGGAGAT+TGG | 0.427326 | 5_1:+71059362 | None:intergenic |
TATTTATCGTATTTGAATGA+AGG | 0.427474 | 5_1:+71062913 | None:intergenic |
GAAGTTTGTTGATGATGAAT+GGG | 0.427897 | 5_1:-71060248 | Msa0747340:CDS |
GATGATGAATGGGGTCCTTC+GGG | 0.429393 | 5_1:-71060238 | Msa0747340:CDS |
TGATGATGAATGGGGTCCTT+CGG | 0.430776 | 5_1:-71060239 | Msa0747340:CDS |
TTTCTGCAACTATGACAGTT+TGG | 0.431693 | 5_1:-71061894 | Msa0747340:CDS |
ATGGGATTTGGATTTGCTGC+TGG | 0.434763 | 5_1:-71058832 | Msa0747340:CDS |
GACCTCCTGGACAAGCAAAT+AGG | 0.436248 | 5_1:-71056896 | Msa0747340:CDS |
CTTGGAAGCTATGACATTAC+CGG | 0.440574 | 5_1:-71061805 | Msa0747340:CDS |
TCTGTAAGAAAGGATTCTGT+TGG | 0.442056 | 5_1:-71060097 | Msa0747340:CDS |
GAGCTGCAAAGGGTTTATTA+GGG | 0.442673 | 5_1:-71056532 | Msa0747340:CDS |
TAACTTACAGCCCAATCATA+TGG | 0.442820 | 5_1:+71058566 | None:intergenic |
CAGTGAAGACAGTGCTAAGC+GGG | 0.445447 | 5_1:-71057554 | Msa0747340:CDS |
TTATTGACAAATATTGATCC+TGG | 0.451580 | 5_1:+71060949 | None:intergenic |
AAAATGTACCTTCGGTCATA+AGG | 0.452052 | 5_1:+71056732 | None:intergenic |
GGATCAATATTTGTCAATAA+GGG | 0.454815 | 5_1:-71060946 | Msa0747340:intron |
GGAAAGAGGAGTGGAGGAAG+GGG | 0.456676 | 5_1:+71062827 | None:intergenic |
AGTGATGATGAAAGGGAAAG+AGG | 0.460705 | 5_1:+71062813 | None:intergenic |
CTGGGGTTCACTTTAGGTTG+CGG | 0.461071 | 5_1:-71061729 | Msa0747340:CDS |
TAATCCAGTGTCTGTACAAA+AGG | 0.461471 | 5_1:+71059216 | None:intergenic |
TGAAGGGAAATGAGAAGAAC+CGG | 0.462467 | 5_1:-71062013 | Msa0747340:intron |
ACAGAATTCACAACAATGGC+TGG | 0.467317 | 5_1:-71057594 | Msa0747340:intron |
TTGCTTAAAATCAAATGCTC+CGG | 0.467520 | 5_1:+71058795 | None:intergenic |
TCTGTTGGATTTGAAGATGA+TGG | 0.467803 | 5_1:-71060082 | Msa0747340:CDS |
GTATCAAGCAAAATAGGCTT+TGG | 0.468390 | 5_1:+71058605 | None:intergenic |
GGTTGCGGGCCTGATTCTAC+AGG | 0.469785 | 5_1:+71056923 | None:intergenic |
AGAAACATTTACCTCGAGCT+TGG | 0.469793 | 5_1:+71058897 | None:intergenic |
TTAATTAGTGGGGATAATAA+GGG | 0.471161 | 5_1:-71060163 | Msa0747340:CDS |
TACGGACCAGTTTCCAGAAA+GGG | 0.471355 | 5_1:+71058672 | None:intergenic |
AAAGACATGCCCTGCTGCAA+TGG | 0.471735 | 5_1:-71058851 | Msa0747340:CDS |
GATGTTAGTCCGAATGTACT+TGG | 0.472336 | 5_1:-71059241 | Msa0747340:CDS |
AGAATACATAAATTAAATCA+AGG | 0.472911 | 5_1:-71056361 | Msa0747340:three_prime_UTR |
GTAAGCCTATTTGCTTGTCC+AGG | 0.474340 | 5_1:+71056891 | None:intergenic |
TAAATAAATAAATAGGAGGA+AGG | 0.475977 | 5_1:-71062896 | Msa0747340:five_prime_UTR |
TGGTATTCTCCATTCTATTG+TGG | 0.476390 | 5_1:+71056595 | None:intergenic |
CACCTTTAAGAGAGGTGATA+CGG | 0.479332 | 5_1:-71056792 | Msa0747340:CDS |
GTACAAATTCATTAATTAGT+GGG | 0.481029 | 5_1:-71060174 | Msa0747340:CDS |
AATCCAAATCCCATTGCAGC+AGG | 0.482843 | 5_1:+71058841 | None:intergenic |
AAGACATGCCCTGCTGCAAT+GGG | 0.483175 | 5_1:-71058850 | Msa0747340:CDS |
TAGAGAAAGTGATGATGAAA+GGG | 0.490877 | 5_1:+71062806 | None:intergenic |
ATAGTAAAGCCACAATAGAA+TGG | 0.492162 | 5_1:-71056604 | Msa0747340:CDS |
CTGCACGATTTATGGAAGAC+TGG | 0.492992 | 5_1:-71060135 | Msa0747340:CDS |
TGAGAAGAACCGGCTAAGCT+TGG | 0.493720 | 5_1:-71062003 | Msa0747340:five_prime_UTR |
CTAGAGAAAGTGATGATGAA+AGG | 0.493970 | 5_1:+71062805 | None:intergenic |
CGGATTGTTGAGGTAAGCGC+TGG | 0.494389 | 5_1:+71060324 | None:intergenic |
CTCTAACTTGAATGTTTGGA+GGG | 0.494796 | 5_1:-71061917 | Msa0747340:CDS |
TCACACCCATGCTGGTCCTG+GGG | 0.495121 | 5_1:-71061088 | Msa0747340:CDS |
CAAAAGGCTCCAAGTACATT+CGG | 0.495399 | 5_1:+71059232 | None:intergenic |
AATAGGCTTTGGCTGCTGAC+AGG | 0.497624 | 5_1:+71058616 | None:intergenic |
CACATACTGTGAATAAGTAT+TGG | 0.499983 | 5_1:+71057485 | None:intergenic |
GAATGAGTTATGCTATGGCC+GGG | 0.500547 | 5_1:-71059158 | Msa0747340:CDS |
CACCAGAGAAAATGTACCTT+CGG | 0.503106 | 5_1:+71056724 | None:intergenic |
GTTAACATCAGCTGCAGGAC+CGG | 0.503541 | 5_1:+71061786 | None:intergenic |
TCTCTAACTTGAATGTTTGG+AGG | 0.504431 | 5_1:-71061918 | Msa0747340:CDS |
CGTACAAATTCATTAATTAG+TGG | 0.509704 | 5_1:-71060175 | Msa0747340:CDS |
ACCAAAGCTTGCAGCAAGTG+TGG | 0.510651 | 5_1:+71062738 | None:intergenic |
TGCAGCTGATGTTAACATGA+TGG | 0.511060 | 5_1:-71061779 | Msa0747340:CDS |
GAACCCAAGTATCCTTCCCT+TGG | 0.511188 | 5_1:+71056693 | None:intergenic |
TTTGCTGCTGGAACAACTGA+TGG | 0.511314 | 5_1:-71058820 | Msa0747340:CDS |
CTATGAGTACTGAGTTTGAA+AGG | 0.511908 | 5_1:+71056623 | None:intergenic |
AGAATGAGTTATGCTATGGC+CGG | 0.513372 | 5_1:-71059159 | Msa0747340:CDS |
TATTTGCTTCTCTCTGCAGC+CGG | 0.515049 | 5_1:+71060304 | None:intergenic |
TGTAAGAGGTGCCCTTAGAC+AGG | 0.516528 | 5_1:-71059311 | Msa0747340:CDS |
TTCAACTGGTTTGCTACTCA+TGG | 0.520824 | 5_1:-71060211 | Msa0747340:CDS |
AAAGCAGTGGAGCTATTCAA+TGG | 0.522635 | 5_1:-71058976 | Msa0747340:CDS |
GCGGGCCTGATTCTACAGGC+TGG | 0.526732 | 5_1:+71056927 | None:intergenic |
CCAATTCGGAGGATTTGGAT+TGG | 0.527785 | 5_1:+71058133 | None:intergenic |
GGGGTTCCATCCATCACTAC+TGG | 0.531201 | 5_1:+71056863 | None:intergenic |
TGCTTAAAATCAAATGCTCC+GGG | 0.533187 | 5_1:+71058796 | None:intergenic |
CTAAGCGGGGACAAAAGCTT+AGG | 0.537641 | 5_1:-71057540 | Msa0747340:CDS |
TGAAAGGGAAAGAGGAGTGG+AGG | 0.539343 | 5_1:+71062821 | None:intergenic |
AAATCATCATCGTCATAAGC+AGG | 0.542582 | 5_1:+71056671 | None:intergenic |
ATTATGTTTGAAATTCTTCG+AGG | 0.543415 | 5_1:+71060055 | None:intergenic |
GTACGAGGTGCAAAGATATG+AGG | 0.544022 | 5_1:-71057448 | Msa0747340:intron |
TAAATAATTACCCAGGTCCC+CGG | 0.546403 | 5_1:+71059140 | None:intergenic |
CATTCAAGTTAGAGAGTGAA+GGG | 0.548327 | 5_1:+71061926 | None:intergenic |
CCCCAAAACTTGCACCAAGA+GGG | 0.548804 | 5_1:+71056843 | None:intergenic |
GTTAATCTCGATGCTTGTAT+GGG | 0.551831 | 5_1:-71061658 | Msa0747340:CDS |
TTACGGACCAGTTTCCAGAA+AGG | 0.552216 | 5_1:+71058671 | None:intergenic |
ACATTCATGTTGTTATAGCA+GGG | 0.552414 | 5_1:-71057512 | Msa0747340:CDS |
TACAAATTCATTAATTAGTG+GGG | 0.552625 | 5_1:-71060173 | Msa0747340:CDS |
AGTGGAATTCACACCCATGC+TGG | 0.553562 | 5_1:-71061096 | Msa0747340:CDS |
ATACCACAGGATGTAGCTCC+TGG | 0.555371 | 5_1:-71056578 | Msa0747340:CDS |
TTACTATCAAAGTACTTGAG+AGG | 0.555403 | 5_1:-71061624 | Msa0747340:CDS |
CAACAAGGGCATCAAATGAC+TGG | 0.557309 | 5_1:+71061016 | None:intergenic |
GTGTATATTGTAACATCTCT+GGG | 0.558277 | 5_1:-71061048 | Msa0747340:CDS |
ATCTGAACAGATTAAAGGAA+AGG | 0.558373 | 5_1:-71058950 | Msa0747340:CDS |
TATTGACAAATATTGATCCT+GGG | 0.561235 | 5_1:+71060950 | None:intergenic |
CATTTGTAGTAGCACACTAA+AGG | 0.561836 | 5_1:-71056478 | Msa0747340:exon |
CACAGAGCAGATTGCATCTG+GGG | 0.562906 | 5_1:-71061746 | Msa0747340:CDS |
GTGTGCGCTTCAAATGGTCA+AGG | 0.563276 | 5_1:-71056646 | Msa0747340:CDS |
TGTAGTAGCACACTAAAGGA+AGG | 0.563282 | 5_1:-71056474 | Msa0747340:exon |
AAGATCACAACTTTACATCT+GGG | 0.565090 | 5_1:-71062687 | Msa0747340:five_prime_UTR |
CAGCGCTTACCTCAACAATC+CGG | 0.567342 | 5_1:-71060323 | Msa0747340:CDS |
TGATGAAAGGGAAAGAGGAG+TGG | 0.567615 | 5_1:+71062818 | None:intergenic |
GCAGCTGATGTTAACATGAT+GGG | 0.567890 | 5_1:-71061778 | Msa0747340:CDS |
ACGATAAATAAATAAATAGG+AGG | 0.567913 | 5_1:-71062900 | Msa0747340:five_prime_UTR |
TATGCTATGGCCGGGGACCT+GGG | 0.569494 | 5_1:-71059150 | Msa0747340:intron |
TCACAACAATGGCTGGGAGG+CGG | 0.569943 | 5_1:-71057587 | Msa0747340:CDS |
AGTGTTGCTAGACGTGTAAG+AGG | 0.571419 | 5_1:-71059325 | Msa0747340:CDS |
CTTACTAACACCAGTAGTGA+TGG | 0.571782 | 5_1:-71056873 | Msa0747340:CDS |
CGTATCACCTCTCTTAAAGG+TGG | 0.576466 | 5_1:+71056793 | None:intergenic |
ATCATGTTAACATCAGCTGC+AGG | 0.578755 | 5_1:+71061781 | None:intergenic |
GCACATGAAAATCTCCGCCC+AGG | 0.580646 | 5_1:-71060967 | Msa0747340:CDS |
TTTATTGTTGCCGAGCCTAA+GGG | 0.580712 | 5_1:-71061697 | Msa0747340:CDS |
ACACAGAGCAGATTGCATCT+GGG | 0.581328 | 5_1:-71061747 | Msa0747340:CDS |
TTCAATCACAGCACATGTGG+GGG | 0.582383 | 5_1:-71059184 | Msa0747340:CDS |
AGCCTATTTGCTTGTCCAGG+AGG | 0.582673 | 5_1:+71056894 | None:intergenic |
ACATTCAAGTTAGAGAGTGA+AGG | 0.583381 | 5_1:+71061925 | None:intergenic |
GGGAAGAATGAGTTATGCTA+TGG | 0.583650 | 5_1:-71059163 | Msa0747340:CDS |
AACACTAGCCTATTACCCTT+AGG | 0.583889 | 5_1:+71061682 | None:intergenic |
AATGAAGCTTCCATATGATT+GGG | 0.584180 | 5_1:-71058576 | Msa0747340:CDS |
CTAACACCAGTAGTGATGGA+TGG | 0.584666 | 5_1:-71056869 | Msa0747340:CDS |
GTGTACTTTCAAATTCATCT+GGG | 0.585221 | 5_1:+71059025 | None:intergenic |
GACTTCAATCACAGCACATG+TGG | 0.585442 | 5_1:-71059187 | Msa0747340:CDS |
CGGTCATAAGGTCATTTCGA+GGG | 0.585678 | 5_1:+71056744 | None:intergenic |
CCAAAGCTTGCAGCAAGTGT+GGG | 0.588327 | 5_1:+71062739 | None:intergenic |
CACCTCGTACTCCTCGTATG+TGG | 0.589423 | 5_1:+71057461 | None:intergenic |
GCATCATTCCAATCTCCTCC+CGG | 0.589478 | 5_1:-71059370 | Msa0747340:CDS |
CTCTGGTGGAATATCTCCAA+GGG | 0.591674 | 5_1:-71056709 | Msa0747340:CDS |
TGAACAGATTAAAGGAAAGG+TGG | 0.591836 | 5_1:-71058947 | Msa0747340:CDS |
AAGACAGACAGACAGAGTTG+TGG | 0.592859 | 5_1:+71062856 | None:intergenic |
TCTCTGGTGGAATATCTCCA+AGG | 0.594118 | 5_1:-71056710 | Msa0747340:CDS |
AGGTTTGTTAACCTGTCTAA+GGG | 0.594837 | 5_1:+71059300 | None:intergenic |
TGCTTGTCCAGGAGGTCTGG+TGG | 0.595380 | 5_1:+71056902 | None:intergenic |
ACTTCAATCACAGCACATGT+GGG | 0.598369 | 5_1:-71059186 | Msa0747340:CDS |
TCTCTGCAGCCGGATTGTTG+AGG | 0.598527 | 5_1:+71060314 | None:intergenic |
GAGGTAAATGTTTCTAGCAG+TGG | 0.603184 | 5_1:-71058889 | Msa0747340:CDS |
CACACCCATGCTGGTCCTGG+GGG | 0.603868 | 5_1:-71061087 | Msa0747340:CDS |
TGAAAGTACACGTATTATAG+GGG | 0.604050 | 5_1:-71059013 | Msa0747340:CDS |
CCCAAAACTTGCACCAAGAG+GGG | 0.604719 | 5_1:+71056844 | None:intergenic |
TCTCCAAGGGAAGGATACTT+GGG | 0.604920 | 5_1:-71056696 | Msa0747340:CDS |
CAGAATTCACAACAATGGCT+GGG | 0.606076 | 5_1:-71057593 | Msa0747340:CDS |
GTGATGGATGGAACCCCTCT+TGG | 0.606165 | 5_1:-71056857 | Msa0747340:CDS |
TTTCTCAATGCCATCAACAA+GGG | 0.607066 | 5_1:+71061002 | None:intergenic |
AATAGAATGGAGAATACCAC+AGG | 0.608925 | 5_1:-71056591 | Msa0747340:CDS |
AAATAAATAAATAGGAGGAA+GGG | 0.609810 | 5_1:-71062895 | Msa0747340:five_prime_UTR |
TCGGTCATAAGGTCATTTCG+AGG | 0.613759 | 5_1:+71056743 | None:intergenic |
TAGCCTATTACCCTTAGGCT+CGG | 0.623029 | 5_1:+71061687 | None:intergenic |
TCTGGATAACAAAGGACATG+TGG | 0.623405 | 5_1:+71056328 | None:intergenic |
GCTGGAACAACTGATGGACC+CGG | 0.623560 | 5_1:-71058814 | Msa0747340:CDS |
TACTTGAGAGGCTTAAAGCA+AGG | 0.625748 | 5_1:-71061612 | Msa0747340:intron |
TTTACTGAAAACGCCTGACA+AGG | 0.625837 | 5_1:-71058648 | Msa0747340:CDS |
AATGAGTTATGCTATGGCCG+GGG | 0.625978 | 5_1:-71059157 | Msa0747340:CDS |
GTAGTAGCACACTAAAGGAA+GGG | 0.627966 | 5_1:-71056473 | Msa0747340:exon |
CTTCAATCACAGCACATGTG+GGG | 0.630784 | 5_1:-71059185 | Msa0747340:CDS |
ACACCCATGCTGGTCCTGGG+GGG | 0.630793 | 5_1:-71061086 | Msa0747340:CDS |
TCCCCAAAACTTGCACCAAG+AGG | 0.631634 | 5_1:+71056842 | None:intergenic |
CGAAATGACCTTATGACCGA+AGG | 0.634937 | 5_1:-71056740 | Msa0747340:CDS |
TCTCTTGTGAATATTAGCCA+AGG | 0.638405 | 5_1:+71056236 | None:intergenic |
AACCAGTTGAAGCTTCCCGA+AGG | 0.641124 | 5_1:+71060223 | None:intergenic |
TTACGATTATTATGAAGACT+GGG | 0.643788 | 5_1:+71060031 | None:intergenic |
TCTGACAGAATTCACAACAA+TGG | 0.655113 | 5_1:-71057598 | Msa0747340:intron |
GGTGGAATATCTCCAAGGGA+AGG | 0.657299 | 5_1:-71056705 | Msa0747340:CDS |
AAGTTTGTTGATGATGAATG+GGG | 0.657872 | 5_1:-71060247 | Msa0747340:CDS |
ATCCAAATCCCATTGCAGCA+GGG | 0.660254 | 5_1:+71058842 | None:intergenic |
CTTGCACACGCTCTCATCAA+CGG | 0.665760 | 5_1:-71056950 | Msa0747340:CDS |
GGATTGTTGAGGTAAGCGCT+GGG | 0.676508 | 5_1:+71060325 | None:intergenic |
GACCACATACGAGGAGTACG+AGG | 0.677175 | 5_1:-71057463 | Msa0747340:CDS |
ACACCAGGAGCTACATCCTG+TGG | 0.687402 | 5_1:+71056575 | None:intergenic |
TTTATTCTTAGTGTACCAGG+AGG | 0.687580 | 5_1:-71058103 | Msa0747340:intron |
TTGGTCGCTGGTCTACCGGG+AGG | 0.688120 | 5_1:+71059355 | None:intergenic |
TCAATCACAGCACATGTGGG+GGG | 0.690919 | 5_1:-71059183 | Msa0747340:CDS |
ATCACAACTTTACATCTGGG+TGG | 0.691314 | 5_1:-71062684 | Msa0747340:intron |
ATGTATGCACTCAATGTGTG+TGG | 0.694548 | 5_1:+71056989 | None:intergenic |
TGACAAATATTGATCCTGGG+CGG | 0.695181 | 5_1:+71060953 | None:intergenic |
ACAGTATGTGACCACATACG+AGG | 0.711222 | 5_1:-71057472 | Msa0747340:CDS |
GCAGTGAAGACAGTGCTAAG+CGG | 0.712901 | 5_1:-71057555 | Msa0747340:CDS |
AGTGAAGACAGTGCTAAGCG+GGG | 0.715425 | 5_1:-71057553 | Msa0747340:CDS |
AATTCACAACAATGGCTGGG+AGG | 0.717802 | 5_1:-71057590 | Msa0747340:CDS |
GTGCTGTGATTGAAGTCACA+AGG | 0.729346 | 5_1:+71059193 | None:intergenic |
TGTGTGTGGACCATAAAGTG+TGG | 0.758656 | 5_1:+71057003 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr5_1:71060854-71060873 | Msa0747340:intron | 0.0% |
!! | TTATTATTAATATATAATTT+GGG | - | chr5_1:71062768-71062787 | Msa0747340:five_prime_UTR | 0.0% |
!! | AATACGATAAATAAATAAAT+AGG | - | chr5_1:71056271-71056290 | Msa0747340:three_prime_UTR | 10.0% |
!! | TGAAATATAAATAGAAATTT+GGG | + | chr5_1:71056687-71056706 | None:intergenic | 10.0% |
!! | ATGAAATATAAATAGAAATT+TGG | + | chr5_1:71056688-71056707 | None:intergenic | 10.0% |
!!! | TTTTTATTTTTGTTCTTTAA+TGG | - | chr5_1:71056710-71056729 | Msa0747340:CDS | 10.0% |
!!! | TTTTATTTTTGTTCTTTAAT+GGG | - | chr5_1:71056711-71056730 | Msa0747340:CDS | 10.0% |
!! | ATTTACCTTGTATTATATAT+GGG | + | chr5_1:71057699-71057718 | None:intergenic | 15.0% |
!!! | TTCAATTATTAATTGATAGT+AGG | - | chr5_1:71059215-71059234 | Msa0747340:CDS | 15.0% |
!! | ATTATCACTTATATAAAGTA+AGG | + | chr5_1:71059662-71059681 | None:intergenic | 15.0% |
!!! | TTTAATGAGTAATATTTTCT+TGG | - | chr5_1:71059683-71059702 | Msa0747340:intron | 15.0% |
!!! | TCATTTTAGTAAATTTGTAA+TGG | - | chr5_1:71060775-71060794 | Msa0747340:intron | 15.0% |
!! | ATTAATTGAATTTACTAAAG+TGG | + | chr5_1:71060835-71060854 | None:intergenic | 15.0% |
!!! | CTTAACATTTTAAAATGTAA+AGG | + | chr5_1:71061142-71061161 | None:intergenic | 15.0% |
!! | TTCAATTATTCATATTGTTA+GGG | - | chr5_1:71062143-71062162 | Msa0747340:intron | 15.0% |
!! | AGAATACATAAATTAAATCA+AGG | - | chr5_1:71062813-71062832 | Msa0747340:five_prime_UTR | 15.0% |
!! | ACAAAAAGATTTAATGAAAT+CGG | + | chr5_1:71062915-71062934 | None:intergenic | 15.0% |
!!! | ATTTCATTAAATCTTTTTGT+GGG | - | chr5_1:71062915-71062934 | Msa0747340:five_prime_UTR | 15.0% |
!! | TATTTATCGTATTTGAATGA+AGG | + | chr5_1:71056264-71056283 | None:intergenic | 20.0% |
!! | ACGATAAATAAATAAATAGG+AGG | - | chr5_1:71056274-71056293 | Msa0747340:three_prime_UTR | 20.0% |
!! | TAAATAAATAAATAGGAGGA+AGG | - | chr5_1:71056278-71056297 | Msa0747340:three_prime_UTR | 20.0% |
!! | AAATAAATAAATAGGAGGAA+GGG | - | chr5_1:71056279-71056298 | Msa0747340:three_prime_UTR | 20.0% |
!! | ATAAACACATAATTAACAGA+GGG | + | chr5_1:71056533-71056552 | None:intergenic | 20.0% |
!!! | GGAAAATTGAACTTTTTTTT+TGG | - | chr5_1:71056793-71056812 | Msa0747340:CDS | 20.0% |
!!! | CACTAACATTATTTTTAGAA+TGG | + | chr5_1:71057014-71057033 | None:intergenic | 20.0% |
!!! | CATTCTAAAAATAATGTTAG+TGG | - | chr5_1:71057012-71057031 | Msa0747340:CDS | 20.0% |
!! | GATTTACCTTGTATTATATA+TGG | + | chr5_1:71057700-71057719 | None:intergenic | 20.0% |
!!! | TTTATTTTGTTTGACAGATA+TGG | - | chr5_1:71058024-71058043 | Msa0747340:intron | 20.0% |
!! | TATCCATTATAAATACCTAA+GGG | + | chr5_1:71058282-71058301 | None:intergenic | 20.0% |
!! | TTATCCATTATAAATACCTA+AGG | + | chr5_1:71058283-71058302 | None:intergenic | 20.0% |
!!! | ACTTCATTGTTATTTAATTG+TGG | - | chr5_1:71058302-71058321 | Msa0747340:intron | 20.0% |
!!! | CTTCATTGTTATTTAATTGT+GGG | - | chr5_1:71058303-71058322 | Msa0747340:intron | 20.0% |
!! | GAAAAAGATGAAAAATCTAT+AGG | - | chr5_1:71058353-71058372 | Msa0747340:intron | 20.0% |
!! | AGATTATGAAAGAACAAAAA+AGG | + | chr5_1:71058444-71058463 | None:intergenic | 20.0% |
!! | CGTTAAATTATTATCAGTAT+CGG | - | chr5_1:71058611-71058630 | Msa0747340:CDS | 20.0% |
!! | GTACAAATTCATTAATTAGT+GGG | - | chr5_1:71059000-71059019 | Msa0747340:CDS | 20.0% |
!! | TACAAATTCATTAATTAGTG+GGG | - | chr5_1:71059001-71059020 | Msa0747340:CDS | 20.0% |
!!! | TTATTAATTGATAGTAGGTT+TGG | - | chr5_1:71059220-71059239 | Msa0747340:CDS | 20.0% |
!! | GATAGATAGTTATAACTTAT+GGG | + | chr5_1:71059450-71059469 | None:intergenic | 20.0% |
!! | AGATAGATAGTTATAACTTA+TGG | + | chr5_1:71059451-71059470 | None:intergenic | 20.0% |
!!! | TATTTTCTTGGATATGATTT+AGG | - | chr5_1:71059695-71059714 | Msa0747340:intron | 20.0% |
!!! | ATTTTCTTGGATATGATTTA+GGG | - | chr5_1:71059696-71059715 | Msa0747340:intron | 20.0% |
!! | TAATCTCACATGAAATTTAT+TGG | - | chr5_1:71059753-71059772 | Msa0747340:intron | 20.0% |
!! | TATGTAATAAATAATTACCC+AGG | + | chr5_1:71060044-71060063 | None:intergenic | 20.0% |
!! | ATATATAAGAATACAAGTCT+AGG | + | chr5_1:71060454-71060473 | None:intergenic | 20.0% |
!! | ACATAATATTCAGCATAAAA+GGG | + | chr5_1:71060634-71060653 | None:intergenic | 20.0% |
!!! | GATTAGTTATATGGTTAATT+AGG | - | chr5_1:71060678-71060697 | Msa0747340:intron | 20.0% |
!! | TTAATTAGGAAAAAAAGAGA+GGG | - | chr5_1:71060692-71060711 | Msa0747340:intron | 20.0% |
!! | AAAAAATGTAGACATACATA+TGG | + | chr5_1:71060936-71060955 | None:intergenic | 20.0% |
!!! | TACATTTTTTTTTCTTTCTG+TGG | - | chr5_1:71060946-71060965 | Msa0747340:intron | 20.0% |
!!! | TACACTATTTTTCATTGATT+CGG | + | chr5_1:71061207-71061226 | None:intergenic | 20.0% |
!!! | ATTACGATATTTTGACTATT+TGG | - | chr5_1:71061281-71061300 | Msa0747340:intron | 20.0% |
!!! | TTACGATATTTTGACTATTT+GGG | - | chr5_1:71061282-71061301 | Msa0747340:intron | 20.0% |
!! | AATGTATTAAACAAGACATT+TGG | + | chr5_1:71061412-71061431 | None:intergenic | 20.0% |
!! | TCAAATAAGTATCTTTGTAT+TGG | - | chr5_1:71061857-71061876 | Msa0747340:CDS | 20.0% |
!!! | TTAACAGAGTTTTGAAAAAA+AGG | + | chr5_1:71062072-71062091 | None:intergenic | 20.0% |
!! | CTTCAATTATTCATATTGTT+AGG | - | chr5_1:71062142-71062161 | Msa0747340:intron | 20.0% |
!!! | GTATACAGAATAAAACATTT+TGG | - | chr5_1:71062620-71062639 | Msa0747340:intron | 20.0% |
!!! | TAAAAATTTCTGGATAACAA+AGG | + | chr5_1:71062857-71062876 | None:intergenic | 20.0% |
!! | GAAAAGCAAATAAAAATTTC+TGG | + | chr5_1:71062867-71062886 | None:intergenic | 20.0% |
!!! | GATTTCATTAAATCTTTTTG+TGG | - | chr5_1:71062914-71062933 | Msa0747340:five_prime_UTR | 20.0% |
! | CATAAACACATAATTAACAG+AGG | + | chr5_1:71056534-71056553 | None:intergenic | 25.0% |
! | AATGCAGAGAATTCTAATTT+GGG | + | chr5_1:71056628-71056647 | None:intergenic | 25.0% |
! | AAATGCAGAGAATTCTAATT+TGG | + | chr5_1:71056629-71056648 | None:intergenic | 25.0% |
! | TAAACAAGGAATTCCAATTT+GGG | + | chr5_1:71056863-71056882 | None:intergenic | 25.0% |
! | AAAAACATGAAAGGTAAACA+AGG | + | chr5_1:71056877-71056896 | None:intergenic | 25.0% |
! | TTCACTCAAAAAAACATGAA+AGG | + | chr5_1:71056886-71056905 | None:intergenic | 25.0% |
!!! | GTTTGAGTGTTATTTTTTGT+AGG | - | chr5_1:71057039-71057058 | Msa0747340:intron | 25.0% |
! | TTACAATAGATTGACTATCA+AGG | - | chr5_1:71057612-71057631 | Msa0747340:intron | 25.0% |
! | ATTGACCCATATATAATACA+AGG | - | chr5_1:71057691-71057710 | Msa0747340:intron | 25.0% |
! | TGAAAAGGTCAATTTCTTAT+GGG | + | chr5_1:71057736-71057755 | None:intergenic | 25.0% |
! | ACAAAATAAAATGCAATGTC+AGG | + | chr5_1:71058014-71058033 | None:intergenic | 25.0% |
! | TATTGACAAATATTGATCCT+GGG | + | chr5_1:71058227-71058246 | None:intergenic | 25.0% |
! | TTATTGACAAATATTGATCC+TGG | + | chr5_1:71058228-71058247 | None:intergenic | 25.0% |
! | AGGATCAATATTTGTCAATA+AGG | - | chr5_1:71058227-71058246 | Msa0747340:intron | 25.0% |
! | GGATCAATATTTGTCAATAA+GGG | - | chr5_1:71058228-71058247 | Msa0747340:intron | 25.0% |
! | AATATTTGTCAATAAGGGTA+AGG | - | chr5_1:71058233-71058252 | Msa0747340:intron | 25.0% |
! | ATATTTGTCAATAAGGGTAA+GGG | - | chr5_1:71058234-71058253 | Msa0747340:intron | 25.0% |
!! | TGTCTTTGTATAGTTTTTCA+GGG | + | chr5_1:71058711-71058730 | None:intergenic | 25.0% |
!! | TTGTCTTTGTATAGTTTTTC+AGG | + | chr5_1:71058712-71058731 | None:intergenic | 25.0% |
! | CGTACAAATTCATTAATTAG+TGG | - | chr5_1:71058999-71059018 | Msa0747340:CDS | 25.0% |
! | ATTAATTAGTGGGGATAATA+AGG | - | chr5_1:71059010-71059029 | Msa0747340:CDS | 25.0% |
! | TTAATTAGTGGGGATAATAA+GGG | - | chr5_1:71059011-71059030 | Msa0747340:CDS | 25.0% |
!! | ATTATGTTTGAAATTCTTCG+AGG | + | chr5_1:71059122-71059141 | None:intergenic | 25.0% |
! | TTACGATTATTATGAAGACT+GGG | + | chr5_1:71059146-71059165 | None:intergenic | 25.0% |
! | ATATAGTATAGCTGTTCTAT+TGG | - | chr5_1:71059414-71059433 | Msa0747340:intron | 25.0% |
!! | TTTTCTTGGATATGATTTAG+GGG | - | chr5_1:71059697-71059716 | Msa0747340:intron | 25.0% |
!! | TTTGAAAGTACACGTATTAT+AGG | - | chr5_1:71060159-71060178 | Msa0747340:CDS | 25.0% |
!! | TTGAAAGTACACGTATTATA+GGG | - | chr5_1:71060160-71060179 | Msa0747340:CDS | 25.0% |
!!! | TTACTTTTTTGTGTGTATCA+GGG | - | chr5_1:71060476-71060495 | Msa0747340:intron | 25.0% |
! | GACATAATATTCAGCATAAA+AGG | + | chr5_1:71060635-71060654 | None:intergenic | 25.0% |
! | GTTAATTAGGAAAAAAAGAG+AGG | - | chr5_1:71060691-71060710 | Msa0747340:intron | 25.0% |
!!! | TTTTTTATTCTTAGTGTACC+AGG | - | chr5_1:71061068-71061087 | Msa0747340:CDS | 25.0% |
! | ATAGTCAAAATATCGTAATC+AGG | + | chr5_1:71061280-71061299 | None:intergenic | 25.0% |
! | TACATTGCAGTTCTATTATA+TGG | - | chr5_1:71061426-71061445 | Msa0747340:intron | 25.0% |
! | ATAGTAATCACAAATTTCCA+AGG | + | chr5_1:71061465-71061484 | None:intergenic | 25.0% |
! | TATCACCTATGTATTTCTTT+GGG | - | chr5_1:71061524-71061543 | Msa0747340:intron | 25.0% |
! | TCTGTAAAGAATTTGTGATA+TGG | + | chr5_1:71062889-71062908 | None:intergenic | 25.0% |
! | TAGAGAAAGTGATGATGAAA+GGG | + | chr5_1:71056371-71056390 | None:intergenic | 30.0% |
AAAGATCACAACTTTACATC+TGG | - | chr5_1:71056486-71056505 | Msa0747340:CDS | 30.0% | |
AAGATCACAACTTTACATCT+GGG | - | chr5_1:71056487-71056506 | Msa0747340:CDS | 30.0% | |
TTGGGAGGTTAATTAATCAT+GGG | + | chr5_1:71056610-71056629 | None:intergenic | 30.0% | |
TTTGGGAGGTTAATTAATCA+TGG | + | chr5_1:71056611-71056630 | None:intergenic | 30.0% | |
! | TTTTGTTCTTTAATGGGAAC+TGG | - | chr5_1:71056717-71056736 | Msa0747340:CDS | 30.0% |
TTTGTTCTTTAATGGGAACT+GGG | - | chr5_1:71056718-71056737 | Msa0747340:CDS | 30.0% | |
GAATTCATCAATCATGGTTA+TGG | + | chr5_1:71056841-71056860 | None:intergenic | 30.0% | |
ATTTGGGAATTCATCAATCA+TGG | + | chr5_1:71056847-71056866 | None:intergenic | 30.0% | |
TGATTGATGAATTCCCAAAT+TGG | - | chr5_1:71056847-71056866 | Msa0747340:CDS | 30.0% | |
GTAAACAAGGAATTCCAATT+TGG | + | chr5_1:71056864-71056883 | None:intergenic | 30.0% | |
! | GTTTTGTGAGTGACTAAATT+AGG | + | chr5_1:71056938-71056957 | None:intergenic | 30.0% |
! | AAATTTCTGAGGACCAAATT+GGG | - | chr5_1:71057082-71057101 | Msa0747340:intron | 30.0% |
AAAAAGAGTAAACCCCAATT+TGG | + | chr5_1:71057098-71057117 | None:intergenic | 30.0% | |
!! | TTTGTGTGTTTGATTTGTGA+AGG | - | chr5_1:71057144-71057163 | Msa0747340:intron | 30.0% |
!! | TTGTGTGTTTGATTTGTGAA+GGG | - | chr5_1:71057145-71057164 | Msa0747340:intron | 30.0% |
!! | TTTCTTGGTTGATTTGAACT+TGG | - | chr5_1:71057204-71057223 | Msa0747340:intron | 30.0% |
!! | TTCTTGGTTGATTTGAACTT+GGG | - | chr5_1:71057205-71057224 | Msa0747340:intron | 30.0% |
GCATATTGTAACTACTTGAT+TGG | - | chr5_1:71057345-71057364 | Msa0747340:intron | 30.0% | |
! | TTACTATCAAAGTACTTGAG+AGG | - | chr5_1:71057550-71057569 | Msa0747340:CDS | 30.0% |
CTGAAAAGGTCAATTTCTTA+TGG | + | chr5_1:71057737-71057756 | None:intergenic | 30.0% | |
! | GAAATTGACCTTTTCAGAAT+AGG | - | chr5_1:71057740-71057759 | Msa0747340:intron | 30.0% |
GAAAATAATGTAGCGATTAG+TGG | - | chr5_1:71058060-71058079 | Msa0747340:intron | 30.0% | |
TGTGTATATTGTAACATCTC+TGG | - | chr5_1:71058125-71058144 | Msa0747340:CDS | 30.0% | |
GTGTATATTGTAACATCTCT+GGG | - | chr5_1:71058126-71058145 | Msa0747340:CDS | 30.0% | |
CTTCCCTTAGGTATTTATAA+TGG | - | chr5_1:71058276-71058295 | Msa0747340:intron | 30.0% | |
!!! | TCAGTTTTAGCTTTACCTTT+TGG | - | chr5_1:71058387-71058406 | Msa0747340:intron | 30.0% |
CATAGACAATTGAAACCAAA+AGG | + | chr5_1:71058405-71058424 | None:intergenic | 30.0% | |
TTTAACGTAATGACATGTGT+CGG | + | chr5_1:71058598-71058617 | None:intergenic | 30.0% | |
AATTTCTATGATACAAGCAG+GGG | + | chr5_1:71058682-71058701 | None:intergenic | 30.0% | |
CAATTTCTATGATACAAGCA+GGG | + | chr5_1:71058683-71058702 | None:intergenic | 30.0% | |
TCAATTTCTATGATACAAGC+AGG | + | chr5_1:71058684-71058703 | None:intergenic | 30.0% | |
AACCATGAAATATCACCAAA+GGG | + | chr5_1:71058771-71058790 | None:intergenic | 30.0% | |
ATATTTCATCTTCTTCTTGC+AGG | - | chr5_1:71058795-71058814 | Msa0747340:CDS | 30.0% | |
!! | TGAAGTTTGTTGATGATGAA+TGG | - | chr5_1:71058925-71058944 | Msa0747340:CDS | 30.0% |
!! | GAAGTTTGTTGATGATGAAT+GGG | - | chr5_1:71058926-71058945 | Msa0747340:CDS | 30.0% |
!! | AAGTTTGTTGATGATGAATG+GGG | - | chr5_1:71058927-71058946 | Msa0747340:CDS | 30.0% |
CTTACGATTATTATGAAGAC+TGG | + | chr5_1:71059147-71059166 | None:intergenic | 30.0% | |
CGTAAGCTCTTTAATGTATT+TGG | - | chr5_1:71059161-71059180 | Msa0747340:CDS | 30.0% | |
TTATCACCCCAAAAAAGAAT+CGG | + | chr5_1:71059350-71059369 | None:intergenic | 30.0% | |
! | CTTGCACTAATTTTGTTCTT+TGG | - | chr5_1:71059500-71059519 | Msa0747340:intron | 30.0% |
CAAAATGCAGATACAAATCT+AGG | + | chr5_1:71059897-71059916 | None:intergenic | 30.0% | |
! | GCATTTTGTCAATCAAATTG+CGG | - | chr5_1:71059909-71059928 | Msa0747340:intron | 30.0% |
AGGTAATTTATAGTAATCGC+TGG | + | chr5_1:71060104-71060123 | None:intergenic | 30.0% | |
GCAATATTAGTTACAACAAG+AGG | + | chr5_1:71060124-71060143 | None:intergenic | 30.0% | |
GTGTACTTTCAAATTCATCT+GGG | + | chr5_1:71060152-71060171 | None:intergenic | 30.0% | |
! | TGAAAGTACACGTATTATAG+GGG | - | chr5_1:71060161-71060180 | Msa0747340:CDS | 30.0% |
ATCTGAACAGATTAAAGGAA+AGG | - | chr5_1:71060224-71060243 | Msa0747340:CDS | 30.0% | |
TTGCTTAAAATCAAATGCTC+CGG | + | chr5_1:71060382-71060401 | None:intergenic | 30.0% | |
! | GAATACAAGTCTAGGATAAT+GGG | + | chr5_1:71060446-71060465 | None:intergenic | 30.0% |
! | AGAATACAAGTCTAGGATAA+TGG | + | chr5_1:71060447-71060466 | None:intergenic | 30.0% |
!!! | CTTACTTTTTTGTGTGTATC+AGG | - | chr5_1:71060475-71060494 | Msa0747340:intron | 30.0% |
!!! | TACTTTTTTGTGTGTATCAG+GGG | - | chr5_1:71060477-71060496 | Msa0747340:intron | 30.0% |
AAATGAAGCTTCCATATGAT+TGG | - | chr5_1:71060597-71060616 | Msa0747340:intron | 30.0% | |
AATGAAGCTTCCATATGATT+GGG | - | chr5_1:71060598-71060617 | Msa0747340:intron | 30.0% | |
AAAAAGAGAGGGAAGATTAA+TGG | - | chr5_1:71060703-71060722 | Msa0747340:intron | 30.0% | |
AAGTCATCAAATACATGTCT+TGG | + | chr5_1:71060913-71060932 | None:intergenic | 30.0% | |
! | ATTTGGATTGGAAGTATAGT+AGG | + | chr5_1:71061032-71061051 | None:intergenic | 30.0% |
GAATAAAAAACTGCCCAATT+CGG | + | chr5_1:71061058-71061077 | None:intergenic | 30.0% | |
!!! | ATGGTCATTTTTCTTTTCCT+TGG | - | chr5_1:71061445-71061464 | Msa0747340:intron | 30.0% |
CAAAGAAATACATAGGTGAT+AGG | + | chr5_1:71061525-71061544 | None:intergenic | 30.0% | |
CTATCACCTATGTATTTCTT+TGG | - | chr5_1:71061523-71061542 | Msa0747340:intron | 30.0% | |
AACATTCATGTTGTTATAGC+AGG | - | chr5_1:71061661-71061680 | Msa0747340:CDS | 30.0% | |
ACATTCATGTTGTTATAGCA+GGG | - | chr5_1:71061662-71061681 | Msa0747340:CDS | 30.0% | |
CACATACTGTGAATAAGTAT+TGG | + | chr5_1:71061692-71061711 | None:intergenic | 30.0% | |
TTGCTACTGCAATCTAAAAA+AGG | + | chr5_1:71061784-71061803 | None:intergenic | 30.0% | |
ATACAAGTACTCTATATGCT+AGG | + | chr5_1:71061921-71061940 | None:intergenic | 30.0% | |
ATGTAGAATCATGTAGAACT+AGG | + | chr5_1:71061962-71061981 | None:intergenic | 30.0% | |
!!! | AGTTTTGAAAAAAAGGTCTG+CGG | + | chr5_1:71062065-71062084 | None:intergenic | 30.0% |
!!! | CTCTTAAAGGTGGAATTTTT+TGG | + | chr5_1:71062374-71062393 | None:intergenic | 30.0% |
! | AAAAATTCCACCTTTAAGAG+AGG | - | chr5_1:71062374-71062393 | Msa0747340:intron | 30.0% |
!!! | ATACGGTTTCTGTTACTTTT+TGG | - | chr5_1:71062399-71062418 | Msa0747340:intron | 30.0% |
ATAGTAAAGCCACAATAGAA+TGG | - | chr5_1:71062570-71062589 | Msa0747340:intron | 30.0% | |
!! | TGTTTTATTCTGTATACACC+AGG | + | chr5_1:71062617-71062636 | None:intergenic | 30.0% |
! | CTAGAGAAAGTGATGATGAA+AGG | + | chr5_1:71056372-71056391 | None:intergenic | 35.0% |
TGAGATGAACTAGCTAAACT+TGG | - | chr5_1:71056772-71056791 | Msa0747340:CDS | 35.0% | |
! | GAAATTTCTGAGGACCAAAT+TGG | - | chr5_1:71057081-71057100 | Msa0747340:intron | 35.0% |
! | AATTTCTGAGGACCAAATTG+GGG | - | chr5_1:71057083-71057102 | Msa0747340:intron | 35.0% |
!! | CTTGGAAAATTGGTCTTTCT+TGG | - | chr5_1:71057189-71057208 | Msa0747340:intron | 35.0% |
! | CATTCAAGTTAGAGAGTGAA+GGG | + | chr5_1:71057251-71057270 | None:intergenic | 35.0% |
! | ACATTCAAGTTAGAGAGTGA+AGG | + | chr5_1:71057252-71057271 | None:intergenic | 35.0% |
CACTCTCTAACTTGAATGTT+TGG | - | chr5_1:71057253-71057272 | Msa0747340:intron | 35.0% | |
TCTCTAACTTGAATGTTTGG+AGG | - | chr5_1:71057256-71057275 | Msa0747340:intron | 35.0% | |
CTCTAACTTGAATGTTTGGA+GGG | - | chr5_1:71057257-71057276 | Msa0747340:intron | 35.0% | |
TTTCTGCAACTATGACAGTT+TGG | - | chr5_1:71057280-71057299 | Msa0747340:intron | 35.0% | |
!! | TGTAACTACTTGATTGGTCT+TGG | - | chr5_1:71057351-71057370 | Msa0747340:intron | 35.0% |
TGTTAATCTCGATGCTTGTA+TGG | - | chr5_1:71057515-71057534 | Msa0747340:CDS | 35.0% | |
GTTAATCTCGATGCTTGTAT+GGG | - | chr5_1:71057516-71057535 | Msa0747340:CDS | 35.0% | |
! | CATGGAATCCTATTCTGAAA+AGG | + | chr5_1:71057751-71057770 | None:intergenic | 35.0% |
CTTCATCAAACGACTAAGAT+AGG | + | chr5_1:71057788-71057807 | None:intergenic | 35.0% | |
GTCGTTTGATGAAGATTAGA+CGG | - | chr5_1:71057794-71057813 | Msa0747340:intron | 35.0% | |
TCACGAAATCAGCTGTAATT+TGG | + | chr5_1:71057828-71057847 | None:intergenic | 35.0% | |
GTTGTTGGATGAAAATCAGA+TGG | + | chr5_1:71057864-71057883 | None:intergenic | 35.0% | |
! | TATCTTGATGCAGCGAATTT+TGG | - | chr5_1:71057920-71057939 | Msa0747340:intron | 35.0% |
! | CAATAATGGGATTCAGGAAA+AGG | + | chr5_1:71057951-71057970 | None:intergenic | 35.0% |
TTTCCTGAATCCCATTATTG+TGG | - | chr5_1:71057951-71057970 | Msa0747340:intron | 35.0% | |
TTCCTGAATCCCATTATTGT+GGG | - | chr5_1:71057952-71057971 | Msa0747340:intron | 35.0% | |
TACAGAACTCCCACAATAAT+GGG | + | chr5_1:71057964-71057983 | None:intergenic | 35.0% | |
ATGTCAGGACTGTAAAAACA+GGG | + | chr5_1:71057999-71058018 | None:intergenic | 35.0% | |
AATGTCAGGACTGTAAAAAC+AGG | + | chr5_1:71058000-71058019 | None:intergenic | 35.0% | |
TTTCTCAATGCCATCAACAA+GGG | + | chr5_1:71058175-71058194 | None:intergenic | 35.0% | |
! | TTTTCTCAATGCCATCAACA+AGG | + | chr5_1:71058176-71058195 | None:intergenic | 35.0% |
!! | CATTGAGAAAAGCATTGTTC+AGG | - | chr5_1:71058185-71058204 | Msa0747340:intron | 35.0% |
!! | AGCATTTGTTTTCTTCCCTT+AGG | - | chr5_1:71058264-71058283 | Msa0747340:intron | 35.0% |
GGGAACATCAATTTCTTATC+TGG | + | chr5_1:71058510-71058529 | None:intergenic | 35.0% | |
! | CACTTAACCCTTTTGATGAA+AGG | - | chr5_1:71058543-71058562 | Msa0747340:intron | 35.0% |
AGACACACCTTTCATCAAAA+GGG | + | chr5_1:71058553-71058572 | None:intergenic | 35.0% | |
ATTTCTATGATACAAGCAGG+GGG | + | chr5_1:71058681-71058700 | None:intergenic | 35.0% | |
AGAAAATGAGTGTTACGAGA+TGG | - | chr5_1:71058732-71058751 | Msa0747340:intron | 35.0% | |
ACCATGAAATATCACCAAAG+GGG | + | chr5_1:71058770-71058789 | None:intergenic | 35.0% | |
CAACCATGAAATATCACCAA+AGG | + | chr5_1:71058772-71058791 | None:intergenic | 35.0% | |
GCGAAAAAGTTCTGTAAGAA+AGG | - | chr5_1:71059067-71059086 | Msa0747340:intron | 35.0% | |
TCTGTAAGAAAGGATTCTGT+TGG | - | chr5_1:71059077-71059096 | Msa0747340:intron | 35.0% | |
TCTGTTGGATTTGAAGATGA+TGG | - | chr5_1:71059092-71059111 | Msa0747340:intron | 35.0% | |
!! | TATCCGTTGATTTGTTCACA+CGG | + | chr5_1:71059251-71059270 | None:intergenic | 35.0% |
AAAAAGAATCGGTGTGTGAT+TGG | + | chr5_1:71059339-71059358 | None:intergenic | 35.0% | |
!!! | ATCACACACCGATTCTTTTT+TGG | - | chr5_1:71059339-71059358 | Msa0747340:CDS | 35.0% |
!!! | TCACACACCGATTCTTTTTT+GGG | - | chr5_1:71059340-71059359 | Msa0747340:CDS | 35.0% |
TCTATCTGTCTTTGTTGCAT+TGG | - | chr5_1:71059464-71059483 | Msa0747340:intron | 35.0% | |
! | GCACTAATTTTGTTCTTTGG+TGG | - | chr5_1:71059503-71059522 | Msa0747340:intron | 35.0% |
TCCTCTTAAAGTCTCAATGT+AGG | - | chr5_1:71059594-71059613 | Msa0747340:intron | 35.0% | |
TGGTACAGATCATGAATTAC+TGG | - | chr5_1:71059773-71059792 | Msa0747340:intron | 35.0% | |
! | TCTAGCAACACTTGAAGTTT+TGG | + | chr5_1:71059841-71059860 | None:intergenic | 35.0% |
!! | AGGTTTGTTAACCTGTCTAA+GGG | + | chr5_1:71059877-71059896 | None:intergenic | 35.0% |
!! | TAGGTTTGTTAACCTGTCTA+AGG | + | chr5_1:71059878-71059897 | None:intergenic | 35.0% |
TAATCCAGTGTCTGTACAAA+AGG | + | chr5_1:71059961-71059980 | None:intergenic | 35.0% | |
CGTGTACTTTCAAATTCATC+TGG | + | chr5_1:71060153-71060172 | None:intergenic | 35.0% | |
GAGACAGTTTAAAAAAGCAG+TGG | - | chr5_1:71060185-71060204 | Msa0747340:CDS | 35.0% | |
GAGCTTGGAAAAATTTAGGA+AGG | + | chr5_1:71060265-71060284 | None:intergenic | 35.0% | |
TGCTTAAAATCAAATGCTCC+GGG | + | chr5_1:71060381-71060400 | None:intergenic | 35.0% | |
!! | GGAGCATTTGATTTTAAGCA+AGG | - | chr5_1:71060381-71060400 | Msa0747340:intron | 35.0% |
! | TTTTAAGCAAGGTGATGATC+AGG | - | chr5_1:71060392-71060411 | Msa0747340:intron | 35.0% |
!! | TAGGATAATGGGTAAGCATA+TGG | + | chr5_1:71060435-71060454 | None:intergenic | 35.0% |
! | CAGGCGTTTTCAGTAAATTA+CGG | + | chr5_1:71060523-71060542 | None:intergenic | 35.0% |
GTATCAAGCAAAATAGGCTT+TGG | + | chr5_1:71060572-71060591 | None:intergenic | 35.0% | |
! | AAGCCTATTTTGCTTGATAC+TGG | - | chr5_1:71060572-71060591 | Msa0747340:intron | 35.0% |
TCACCAGTATCAAGCAAAAT+AGG | + | chr5_1:71060578-71060597 | None:intergenic | 35.0% | |
TAACTTACAGCCCAATCATA+TGG | + | chr5_1:71060611-71060630 | None:intergenic | 35.0% | |
AGGGAAGATTAATGGTATAG+AGG | - | chr5_1:71060711-71060730 | Msa0747340:intron | 35.0% | |
!!! | GTATAGAGGCTGTTTTTAAG+AGG | - | chr5_1:71060725-71060744 | Msa0747340:intron | 35.0% |
TTTATTCTTAGTGTACCAGG+AGG | - | chr5_1:71061071-71061090 | Msa0747340:CDS | 35.0% | |
AAATTAAGAACCATACCTCC+TGG | + | chr5_1:71061089-71061108 | None:intergenic | 35.0% | |
! | ACAAGACATTTGGAGTACAT+TGG | + | chr5_1:71061402-71061421 | None:intergenic | 35.0% |
AAGCACCCAAAGAAATACAT+AGG | + | chr5_1:71061532-71061551 | None:intergenic | 35.0% | |
TCTGACAGAATTCACAACAA+TGG | - | chr5_1:71061576-71061595 | Msa0747340:intron | 35.0% | |
!! | GAAGGTCTGTCATTTCTTTT+AGG | + | chr5_1:71061899-71061918 | None:intergenic | 35.0% |
AAGTACTCTATATGCTAGGA+AGG | + | chr5_1:71061917-71061936 | None:intergenic | 35.0% | |
AAAATGTACCTTCGGTCATA+AGG | + | chr5_1:71062445-71062464 | None:intergenic | 35.0% | |
AAATCATCATCGTCATAAGC+AGG | + | chr5_1:71062506-71062525 | None:intergenic | 35.0% | |
! | ATTTTTGTGTGCGCTTCAAA+TGG | - | chr5_1:71062522-71062541 | Msa0747340:intron | 35.0% |
!! | CTATGAGTACTGAGTTTGAA+AGG | + | chr5_1:71062554-71062573 | None:intergenic | 35.0% |
TGGTATTCTCCATTCTATTG+TGG | + | chr5_1:71062582-71062601 | None:intergenic | 35.0% | |
AATAGAATGGAGAATACCAC+AGG | - | chr5_1:71062583-71062602 | Msa0747340:intron | 35.0% | |
!!! | AAAACATTTTGGAGCTGCAA+AGG | - | chr5_1:71062631-71062650 | Msa0747340:intron | 35.0% |
!!! | AAACATTTTGGAGCTGCAAA+GGG | - | chr5_1:71062632-71062651 | Msa0747340:intron | 35.0% |
CATTTGTAGTAGCACACTAA+AGG | - | chr5_1:71062696-71062715 | Msa0747340:five_prime_UTR | 35.0% | |
GATTCATTCTACACGTTCAA+TGG | - | chr5_1:71062733-71062752 | Msa0747340:five_prime_UTR | 35.0% | |
! | TTAAATCTTTTTGTGGGCCT+TGG | - | chr5_1:71062921-71062940 | Msa0747340:five_prime_UTR | 35.0% |
! | AGTGATGATGAAAGGGAAAG+AGG | + | chr5_1:71056364-71056383 | None:intergenic | 40.0% |
ATCACAACTTTACATCTGGG+TGG | - | chr5_1:71056490-71056509 | Msa0747340:CDS | 40.0% | |
GCAGAGAATTCTAATTTGGG+AGG | + | chr5_1:71056625-71056644 | None:intergenic | 40.0% | |
CGTAATACCCAAATTAGTCG+CGG | - | chr5_1:71056957-71056976 | Msa0747340:CDS | 40.0% | |
TCAATGTCCGCGACTAATTT+GGG | + | chr5_1:71056967-71056986 | None:intergenic | 40.0% | |
TGAAGGGAAATGAGAAGAAC+CGG | - | chr5_1:71057161-71057180 | Msa0747340:intron | 40.0% | |
! | ACCAATTTTCCAAGCTTAGC+CGG | + | chr5_1:71057183-71057202 | None:intergenic | 40.0% |
CTTGGAAGCTATGACATTAC+CGG | - | chr5_1:71057369-71057388 | Msa0747340:intron | 40.0% | |
ATCATGTTAACATCAGCTGC+AGG | + | chr5_1:71057396-71057415 | None:intergenic | 40.0% | |
TGCAGCTGATGTTAACATGA+TGG | - | chr5_1:71057395-71057414 | Msa0747340:intron | 40.0% | |
GCAGCTGATGTTAACATGAT+GGG | - | chr5_1:71057396-71057415 | Msa0747340:intron | 40.0% | |
! | TTTTATTGTTGCCGAGCCTA+AGG | - | chr5_1:71057476-71057495 | Msa0747340:CDS | 40.0% |
TTTATTGTTGCCGAGCCTAA+GGG | - | chr5_1:71057477-71057496 | Msa0747340:CDS | 40.0% | |
! | AACACTAGCCTATTACCCTT+AGG | + | chr5_1:71057495-71057514 | None:intergenic | 40.0% |
TACTTGAGAGGCTTAAAGCA+AGG | - | chr5_1:71057562-71057581 | Msa0747340:CDS | 40.0% | |
TAGGCAATTGCGTGAATACA+TGG | + | chr5_1:71057769-71057788 | None:intergenic | 40.0% | |
AATGGGATTCAGGAAAAGGT+TGG | + | chr5_1:71057947-71057966 | None:intergenic | 40.0% | |
CTACAGAACTCCCACAATAA+TGG | + | chr5_1:71057965-71057984 | None:intergenic | 40.0% | |
TGTCAGGACTGTAAAAACAG+GGG | + | chr5_1:71057998-71058017 | None:intergenic | 40.0% | |
TCATTTGATGCCCTTGTTGA+TGG | - | chr5_1:71058162-71058181 | Msa0747340:intron | 40.0% | |
TGACAAATATTGATCCTGGG+CGG | + | chr5_1:71058224-71058243 | None:intergenic | 40.0% | |
!!! | TCTGGTTTTAGTCAAGACTG+TGG | + | chr5_1:71058492-71058511 | None:intergenic | 40.0% |
AAAAGGGTTAAGTGCTACAG+AGG | + | chr5_1:71058537-71058556 | None:intergenic | 40.0% | |
CAGACACACCTTTCATCAAA+AGG | + | chr5_1:71058554-71058573 | None:intergenic | 40.0% | |
!! | CTTTTGATGAAAGGTGTGTC+TGG | - | chr5_1:71058552-71058571 | Msa0747340:intron | 40.0% |
TTTCTATGATACAAGCAGGG+GGG | + | chr5_1:71058680-71058699 | None:intergenic | 40.0% | |
CATGAAATATCACCAAAGGG+GGG | + | chr5_1:71058768-71058787 | None:intergenic | 40.0% | |
CCATGAAATATCACCAAAGG+GGG | + | chr5_1:71058769-71058788 | None:intergenic | 40.0% | |
!! | TTCAACTGGTTTGCTACTCA+TGG | - | chr5_1:71058963-71058982 | Msa0747340:CDS | 40.0% |
TTGCCGTGTGAACAAATCAA+CGG | - | chr5_1:71059245-71059264 | Msa0747340:CDS | 40.0% | |
!!! | CACACACCGATTCTTTTTTG+GGG | - | chr5_1:71059341-71059360 | Msa0747340:CDS | 40.0% |
GTTACACAACTTCACAGTTC+TGG | - | chr5_1:71059547-71059566 | Msa0747340:intron | 40.0% | |
GCCTACATTGAGACTTTAAG+AGG | + | chr5_1:71059598-71059617 | None:intergenic | 40.0% | |
! | TCAATGTAGGCTGACTTCAA+TGG | - | chr5_1:71059607-71059626 | Msa0747340:intron | 40.0% |
! | GCTGACTTCAATGGAATTGT+CGG | - | chr5_1:71059616-71059635 | Msa0747340:intron | 40.0% |
GATGTTAGTCCGAATGTACT+TGG | - | chr5_1:71059933-71059952 | Msa0747340:intron | 40.0% | |
CAAAAGGCTCCAAGTACATT+CGG | + | chr5_1:71059945-71059964 | None:intergenic | 40.0% | |
ACTTCAATCACAGCACATGT+GGG | - | chr5_1:71059988-71060007 | Msa0747340:intron | 40.0% | |
GGGAAGAATGAGTTATGCTA+TGG | - | chr5_1:71060011-71060030 | Msa0747340:intron | 40.0% | |
AGAATGAGTTATGCTATGGC+CGG | - | chr5_1:71060015-71060034 | Msa0747340:intron | 40.0% | |
TAAATAATTACCCAGGTCCC+CGG | + | chr5_1:71060037-71060056 | None:intergenic | 40.0% | |
AAAGCAGTGGAGCTATTCAA+TGG | - | chr5_1:71060198-71060217 | Msa0747340:CDS | 40.0% | |
! | GGAGCATCTGAACAGATTAA+AGG | - | chr5_1:71060219-71060238 | Msa0747340:CDS | 40.0% |
CCTCGAGCTTGGAAAAATTT+AGG | + | chr5_1:71060269-71060288 | None:intergenic | 40.0% | |
! | CCTAAATTTTTCCAAGCTCG+AGG | - | chr5_1:71060266-71060285 | Msa0747340:CDS | 40.0% |
AGAAACATTTACCTCGAGCT+TGG | + | chr5_1:71060280-71060299 | None:intergenic | 40.0% | |
!! | GAGGTAAATGTTTCTAGCAG+TGG | - | chr5_1:71060285-71060304 | Msa0747340:CDS | 40.0% |
TTTACTGAAAACGCCTGACA+AGG | - | chr5_1:71060526-71060545 | Msa0747340:intron | 40.0% | |
CCATATAACTAATCTGAGCC+TGG | + | chr5_1:71060672-71060691 | None:intergenic | 40.0% | |
! | CCAGGCTCAGATTAGTTATA+TGG | - | chr5_1:71060669-71060688 | Msa0747340:intron | 40.0% |
ATTGCATGACCTGATCTTCT+TGG | - | chr5_1:71060804-71060823 | Msa0747340:intron | 40.0% | |
CAATCCAAATCCTCCGAATT+GGG | - | chr5_1:71061042-71061061 | Msa0747340:CDS | 40.0% | |
TAAAAAACTGCCCAATTCGG+AGG | + | chr5_1:71061055-71061074 | None:intergenic | 40.0% | |
ACAGACTACTCATTAGACCA+AGG | + | chr5_1:71061181-71061200 | None:intergenic | 40.0% | |
TGAATTGCACAAAGTAGTGC+TGG | + | chr5_1:71061310-71061329 | None:intergenic | 40.0% | |
ACATAGGTGATAGGACAACT+TGG | + | chr5_1:71061516-71061535 | None:intergenic | 40.0% | |
ACAGAATTCACAACAATGGC+TGG | - | chr5_1:71061580-71061599 | Msa0747340:intron | 40.0% | |
CAGAATTCACAACAATGGCT+GGG | - | chr5_1:71061581-71061600 | Msa0747340:intron | 40.0% | |
! | GAGGTCAGTTGTAACTTTTG+TGG | - | chr5_1:71061745-71061764 | Msa0747340:CDS | 40.0% |
! | TTTGTATTGGCACACAGAGA+TGG | - | chr5_1:71061870-71061889 | Msa0747340:CDS | 40.0% |
ATGTATGCACTCAATGTGTG+TGG | + | chr5_1:71062188-71062207 | None:intergenic | 40.0% | |
CACATTGAGTGCATACATTC+AGG | - | chr5_1:71062190-71062209 | Msa0747340:intron | 40.0% | |
CTTACTAACACCAGTAGTGA+TGG | - | chr5_1:71062301-71062320 | Msa0747340:intron | 40.0% | |
! | CACCTTTAAGAGAGGTGATA+CGG | - | chr5_1:71062382-71062401 | Msa0747340:intron | 40.0% |
AACCGTATCACCTCTCTTAA+AGG | + | chr5_1:71062387-71062406 | None:intergenic | 40.0% | |
CACCAGAGAAAATGTACCTT+CGG | + | chr5_1:71062453-71062472 | None:intergenic | 40.0% | |
GAGCTGCAAAGGGTTTATTA+GGG | - | chr5_1:71062642-71062661 | Msa0747340:intron | 40.0% | |
TGTAGTAGCACACTAAAGGA+AGG | - | chr5_1:71062700-71062719 | Msa0747340:five_prime_UTR | 40.0% | |
GTAGTAGCACACTAAAGGAA+GGG | - | chr5_1:71062701-71062720 | Msa0747340:five_prime_UTR | 40.0% | |
TCTGGATAACAAAGGACATG+TGG | + | chr5_1:71062849-71062868 | None:intergenic | 40.0% | |
AAGACAGACAGACAGAGTTG+TGG | + | chr5_1:71056321-71056340 | None:intergenic | 45.0% | |
TGATGAAAGGGAAAGAGGAG+TGG | + | chr5_1:71056359-71056378 | None:intergenic | 45.0% | |
! | ATGGGAACTGGGAAGTTTTG+TGG | - | chr5_1:71056729-71056748 | Msa0747340:CDS | 45.0% |
!! | TGGGAACTGGGAAGTTTTGT+GGG | - | chr5_1:71056730-71056749 | Msa0747340:CDS | 45.0% |
GTCAATGTCCGCGACTAATT+TGG | + | chr5_1:71056968-71056987 | None:intergenic | 45.0% | |
TGAGCAGCGAGAAATTTCTG+AGG | - | chr5_1:71057071-71057090 | Msa0747340:intron | 45.0% | |
ACCGGCTAAGCTTGGAAAAT+TGG | - | chr5_1:71057179-71057198 | Msa0747340:intron | 45.0% | |
AACACAGAGCAGATTGCATC+TGG | - | chr5_1:71057426-71057445 | Msa0747340:intron | 45.0% | |
ACACAGAGCAGATTGCATCT+GGG | - | chr5_1:71057427-71057446 | Msa0747340:intron | 45.0% | |
! | TTGCATCTGGGGTTCACTTT+AGG | - | chr5_1:71057439-71057458 | Msa0747340:intron | 45.0% |
TAGCCTATTACCCTTAGGCT+CGG | + | chr5_1:71057490-71057509 | None:intergenic | 45.0% | |
TCATGAAGTCAAGCTCACGT+AGG | + | chr5_1:71057899-71057918 | None:intergenic | 45.0% | |
! | CTCCCACAATAATGGGATTC+AGG | + | chr5_1:71057957-71057976 | None:intergenic | 45.0% |
!! | CAACAAGGGCATCAAATGAC+TGG | + | chr5_1:71058161-71058180 | None:intergenic | 45.0% |
GGTTAAATTTCTCCCCCCTT+TGG | - | chr5_1:71058753-71058772 | Msa0747340:intron | 45.0% | |
! | CCCCCTTTGGTGATATTTCA+TGG | - | chr5_1:71058766-71058785 | Msa0747340:intron | 45.0% |
TATTTGCTTCTCTCTGCAGC+CGG | + | chr5_1:71058873-71058892 | None:intergenic | 45.0% | |
! | TGATGATGAATGGGGTCCTT+CGG | - | chr5_1:71058935-71058954 | Msa0747340:CDS | 45.0% |
CTGCACGATTTATGGAAGAC+TGG | - | chr5_1:71059039-71059058 | Msa0747340:intron | 45.0% | |
!!! | TTTTGGGGTGATAAGCAGTG+TGG | - | chr5_1:71059356-71059375 | Msa0747340:CDS | 45.0% |
!! | ACACTTGAAGTTTTGGTCGC+TGG | + | chr5_1:71059834-71059853 | None:intergenic | 45.0% |
! | AGTGTTGCTAGACGTGTAAG+AGG | - | chr5_1:71059849-71059868 | Msa0747340:intron | 45.0% |
GTGCTGTGATTGAAGTCACA+AGG | + | chr5_1:71059984-71060003 | None:intergenic | 45.0% | |
GACTTCAATCACAGCACATG+TGG | - | chr5_1:71059987-71060006 | Msa0747340:intron | 45.0% | |
CTTCAATCACAGCACATGTG+GGG | - | chr5_1:71059989-71060008 | Msa0747340:intron | 45.0% | |
TTCAATCACAGCACATGTGG+GGG | - | chr5_1:71059990-71060009 | Msa0747340:intron | 45.0% | |
GAATGAGTTATGCTATGGCC+GGG | - | chr5_1:71060016-71060035 | Msa0747340:intron | 45.0% | |
AATGAGTTATGCTATGGCCG+GGG | - | chr5_1:71060017-71060036 | Msa0747340:intron | 45.0% | |
TTCTAGCAGTGGAGCTTCTA+AGG | - | chr5_1:71060296-71060315 | Msa0747340:CDS | 45.0% | |
ATCCAAATCCCATTGCAGCA+GGG | + | chr5_1:71060335-71060354 | None:intergenic | 45.0% | |
AATCCAAATCCCATTGCAGC+AGG | + | chr5_1:71060336-71060355 | None:intergenic | 45.0% | |
!! | ATGGGATTTGGATTTGCTGC+TGG | - | chr5_1:71060342-71060361 | Msa0747340:CDS | 45.0% |
TTTGCTGCTGGAACAACTGA+TGG | - | chr5_1:71060354-71060373 | Msa0747340:CDS | 45.0% | |
TACGGACCAGTTTCCAGAAA+GGG | + | chr5_1:71060505-71060524 | None:intergenic | 45.0% | |
TTACGGACCAGTTTCCAGAA+AGG | + | chr5_1:71060506-71060525 | None:intergenic | 45.0% | |
CAGGCTATTTGTTCCTTGTC+AGG | + | chr5_1:71060542-71060561 | None:intergenic | 45.0% | |
TGTCTTATAGTCTCCACTCC+AGG | - | chr5_1:71060651-71060670 | Msa0747340:intron | 45.0% | |
TAACTAATCTGAGCCTGGAG+TGG | + | chr5_1:71060667-71060686 | None:intergenic | 45.0% | |
! | TGGAAGTATAGTAGGCTGCA+AGG | + | chr5_1:71061024-71061043 | None:intergenic | 45.0% |
CCAATTCGGAGGATTTGGAT+TGG | + | chr5_1:71061044-71061063 | None:intergenic | 45.0% | |
CCAATCCAAATCCTCCGAAT+TGG | - | chr5_1:71061041-71061060 | Msa0747340:CDS | 45.0% | |
TCTTAGTGTACCAGGAGGTA+TGG | - | chr5_1:71061076-71061095 | Msa0747340:CDS | 45.0% | |
! | GTTTCAAGTGTCAACGACCT+TGG | - | chr5_1:71061161-71061180 | Msa0747340:intron | 45.0% |
AATTCACAACAATGGCTGGG+AGG | - | chr5_1:71061584-71061603 | Msa0747340:intron | 45.0% | |
ACAGTATGTGACCACATACG+AGG | - | chr5_1:71061702-71061721 | Msa0747340:CDS | 45.0% | |
GTACGAGGTGCAAAGATATG+AGG | - | chr5_1:71061726-71061745 | Msa0747340:CDS | 45.0% | |
TGCTGCCCATGAAGCAATAT+TGG | - | chr5_1:71061987-71062006 | Msa0747340:five_prime_UTR | 45.0% | |
GCTGCCCATGAAGCAATATT+GGG | - | chr5_1:71061988-71062007 | Msa0747340:five_prime_UTR | 45.0% | |
GCCTCCCAATATTGCTTCAT+GGG | + | chr5_1:71061995-71062014 | None:intergenic | 45.0% | |
TGCCTCCCAATATTGCTTCA+TGG | + | chr5_1:71061996-71062015 | None:intergenic | 45.0% | |
! | TAGGGTGCTTCCACACTTTA+TGG | - | chr5_1:71062161-71062180 | Msa0747340:intron | 45.0% |
TGTGTGTGGACCATAAAGTG+TGG | + | chr5_1:71062174-71062193 | None:intergenic | 45.0% | |
GTAAGCCTATTTGCTTGTCC+AGG | + | chr5_1:71062286-71062305 | None:intergenic | 45.0% | |
! | CTAACACCAGTAGTGATGGA+TGG | - | chr5_1:71062305-71062324 | Msa0747340:intron | 45.0% |
CGTATCACCTCTCTTAAAGG+TGG | + | chr5_1:71062384-71062403 | None:intergenic | 45.0% | |
CGGTCATAAGGTCATTTCGA+GGG | + | chr5_1:71062433-71062452 | None:intergenic | 45.0% | |
TCGGTCATAAGGTCATTTCG+AGG | + | chr5_1:71062434-71062453 | None:intergenic | 45.0% | |
CGAAATGACCTTATGACCGA+AGG | - | chr5_1:71062434-71062453 | Msa0747340:intron | 45.0% | |
!! | GACCGAAGGTACATTTTCTC+TGG | - | chr5_1:71062448-71062467 | Msa0747340:intron | 45.0% |
!! | CGAAGGTACATTTTCTCTGG+TGG | - | chr5_1:71062451-71062470 | Msa0747340:intron | 45.0% |
TCTCTGGTGGAATATCTCCA+AGG | - | chr5_1:71062464-71062483 | Msa0747340:intron | 45.0% | |
CTCTGGTGGAATATCTCCAA+GGG | - | chr5_1:71062465-71062484 | Msa0747340:intron | 45.0% | |
ATCTCCAAGGGAAGGATACT+TGG | - | chr5_1:71062477-71062496 | Msa0747340:intron | 45.0% | |
TCTCCAAGGGAAGGATACTT+GGG | - | chr5_1:71062478-71062497 | Msa0747340:intron | 45.0% | |
GGAGCTGCAAAGGGTTTATT+AGG | - | chr5_1:71062641-71062660 | Msa0747340:intron | 45.0% | |
! | GGGTCAATTCGTCACTTTAC+AGG | - | chr5_1:71062662-71062681 | Msa0747340:intron | 45.0% |
!! | GTTATTATTAATATATAATT+TGG | - | chr5_1:71062767-71062786 | Msa0747340:five_prime_UTR | 5.0% |
TGAAAGGGAAAGAGGAGTGG+AGG | + | chr5_1:71056356-71056375 | None:intergenic | 50.0% | |
CCAAAGCTTGCAGCAAGTGT+GGG | + | chr5_1:71056438-71056457 | None:intergenic | 50.0% | |
ACCAAAGCTTGCAGCAAGTG+TGG | + | chr5_1:71056439-71056458 | None:intergenic | 50.0% | |
TGAGAAGAACCGGCTAAGCT+TGG | - | chr5_1:71057171-71057190 | Msa0747340:intron | 50.0% | |
GTTAACATCAGCTGCAGGAC+CGG | + | chr5_1:71057391-71057410 | None:intergenic | 50.0% | |
CACAGAGCAGATTGCATCTG+GGG | - | chr5_1:71057428-71057447 | Msa0747340:intron | 50.0% | |
!! | CTGGGGTTCACTTTAGGTTG+CGG | - | chr5_1:71057445-71057464 | Msa0747340:intron | 50.0% |
TTGCCGAGCCTAAGGGTAAT+AGG | - | chr5_1:71057484-71057503 | Msa0747340:CDS | 50.0% | |
! | AGGCATGGGATAACGGTTGT+TGG | + | chr5_1:71057879-71057898 | None:intergenic | 50.0% |
CTCACGTAGGCATGGGATAA+CGG | + | chr5_1:71057886-71057905 | None:intergenic | 50.0% | |
AGTCAAGCTCACGTAGGCAT+GGG | + | chr5_1:71057893-71057912 | None:intergenic | 50.0% | |
AAGTCAAGCTCACGTAGGCA+TGG | + | chr5_1:71057894-71057913 | None:intergenic | 50.0% | |
AGTGGAATTCACACCCATGC+TGG | - | chr5_1:71058078-71058097 | Msa0747340:intron | 50.0% | |
ACATACTGAAGATACCCCCC+AGG | + | chr5_1:71058105-71058124 | None:intergenic | 50.0% | |
TTAAGTGCTACAGAGGTCGG+GGG | + | chr5_1:71058530-71058549 | None:intergenic | 50.0% | |
GTTAAGTGCTACAGAGGTCG+GGG | + | chr5_1:71058531-71058550 | None:intergenic | 50.0% | |
GGTTAAGTGCTACAGAGGTC+GGG | + | chr5_1:71058532-71058551 | None:intergenic | 50.0% | |
GGGTTAAGTGCTACAGAGGT+CGG | + | chr5_1:71058533-71058552 | None:intergenic | 50.0% | |
!! | TGTCGGTGTCGTATTGGTCT+TGG | + | chr5_1:71058581-71058600 | None:intergenic | 50.0% |
!! | GACATGTGTCGGTGTCGTAT+TGG | + | chr5_1:71058587-71058606 | None:intergenic | 50.0% |
!! | AGTATCGGCGTGTTAGTGTC+TGG | - | chr5_1:71058626-71058645 | Msa0747340:CDS | 50.0% |
! | GCAGGAGAGCTTTTAGATGC+TGG | - | chr5_1:71058813-71058832 | Msa0747340:CDS | 50.0% |
GGATTGTTGAGGTAAGCGCT+GGG | + | chr5_1:71058852-71058871 | None:intergenic | 50.0% | |
CAGCGCTTACCTCAACAATC+CGG | - | chr5_1:71058851-71058870 | Msa0747340:CDS | 50.0% | |
GATGATGAATGGGGTCCTTC+GGG | - | chr5_1:71058936-71058955 | Msa0747340:CDS | 50.0% | |
AACCAGTTGAAGCTTCCCGA+AGG | + | chr5_1:71058954-71058973 | None:intergenic | 50.0% | |
! | CAACTTCACAGTTCTGGCGT+TGG | - | chr5_1:71059553-71059572 | Msa0747340:intron | 50.0% |
GCATCATTCCAATCTCCTCC+CGG | - | chr5_1:71059804-71059823 | Msa0747340:intron | 50.0% | |
!! | AGTTTTGGTCGCTGGTCTAC+CGG | + | chr5_1:71059826-71059845 | None:intergenic | 50.0% |
!! | TGTAAGAGGTGCCCTTAGAC+AGG | - | chr5_1:71059863-71059882 | Msa0747340:intron | 50.0% |
! | GGAGCCTTTTGTACAGACAC+TGG | - | chr5_1:71059954-71059973 | Msa0747340:intron | 50.0% |
TCAATCACAGCACATGTGGG+GGG | - | chr5_1:71059991-71060010 | Msa0747340:intron | 50.0% | |
AAAGACATGCCCTGCTGCAA+TGG | - | chr5_1:71060323-71060342 | Msa0747340:CDS | 50.0% | |
AAGACATGCCCTGCTGCAAT+GGG | - | chr5_1:71060324-71060343 | Msa0747340:CDS | 50.0% | |
TGTATCAGGGGAACCCTTTC+TGG | - | chr5_1:71060489-71060508 | Msa0747340:intron | 50.0% | |
! | AATAGGCTTTGGCTGCTGAC+AGG | + | chr5_1:71060561-71060580 | None:intergenic | 50.0% |
GTGGACAAGCCAAGAAGATC+AGG | + | chr5_1:71060816-71060835 | None:intergenic | 50.0% | |
ACTGCCCAATTCGGAGGATT+TGG | + | chr5_1:71061049-71061068 | None:intergenic | 50.0% | |
GCAGTGAAGACAGTGCTAAG+CGG | - | chr5_1:71061619-71061638 | Msa0747340:CDS | 50.0% | |
CAGTGAAGACAGTGCTAAGC+GGG | - | chr5_1:71061620-71061639 | Msa0747340:CDS | 50.0% | |
AGTGAAGACAGTGCTAAGCG+GGG | - | chr5_1:71061621-71061640 | Msa0747340:CDS | 50.0% | |
CTAAGCGGGGACAAAAGCTT+AGG | - | chr5_1:71061634-71061653 | Msa0747340:CDS | 50.0% | |
ATTGCTTCATGGGCAGCACA+AGG | + | chr5_1:71061985-71062004 | None:intergenic | 50.0% | |
GCCCATGAAGCAATATTGGG+AGG | - | chr5_1:71061991-71062010 | Msa0747340:five_prime_UTR | 50.0% | |
CTTGCACACGCTCTCATCAA+CGG | - | chr5_1:71062224-71062243 | Msa0747340:intron | 50.0% | |
ATTTGCTTGTCCAGGAGGTC+TGG | + | chr5_1:71062278-71062297 | None:intergenic | 50.0% | |
GACCTCCTGGACAAGCAAAT+AGG | - | chr5_1:71062278-71062297 | Msa0747340:intron | 50.0% | |
AGCCTATTTGCTTGTCCAGG+AGG | + | chr5_1:71062283-71062302 | None:intergenic | 50.0% | |
!! | ACCCCTCTTGGTGCAAGTTT+TGG | - | chr5_1:71062329-71062348 | Msa0747340:intron | 50.0% |
CCCAAAACTTGCACCAAGAG+GGG | + | chr5_1:71062333-71062352 | None:intergenic | 50.0% | |
!! | CCCCTCTTGGTGCAAGTTTT+GGG | - | chr5_1:71062330-71062349 | Msa0747340:intron | 50.0% |
CCCCAAAACTTGCACCAAGA+GGG | + | chr5_1:71062334-71062353 | None:intergenic | 50.0% | |
!! | CCCTCTTGGTGCAAGTTTTG+GGG | - | chr5_1:71062331-71062350 | Msa0747340:intron | 50.0% |
TCCCCAAAACTTGCACCAAG+AGG | + | chr5_1:71062335-71062354 | None:intergenic | 50.0% | |
GGTGGAATATCTCCAAGGGA+AGG | - | chr5_1:71062469-71062488 | Msa0747340:intron | 50.0% | |
GAACCCAAGTATCCTTCCCT+TGG | + | chr5_1:71062484-71062503 | None:intergenic | 50.0% | |
GTGTGCGCTTCAAATGGTCA+AGG | - | chr5_1:71062528-71062547 | Msa0747340:intron | 50.0% | |
ATACCACAGGATGTAGCTCC+TGG | - | chr5_1:71062596-71062615 | Msa0747340:intron | 50.0% | |
GGAAAGAGGAGTGGAGGAAG+GGG | + | chr5_1:71056350-71056369 | None:intergenic | 55.0% | |
GGGAAAGAGGAGTGGAGGAA+GGG | + | chr5_1:71056351-71056370 | None:intergenic | 55.0% | |
AGGGAAAGAGGAGTGGAGGA+AGG | + | chr5_1:71056352-71056371 | None:intergenic | 55.0% | |
! | CCCACACTTGCTGCAAGCTT+TGG | - | chr5_1:71056435-71056454 | Msa0747340:three_prime_UTR | 55.0% |
ATTCACACCCATGCTGGTCC+TGG | - | chr5_1:71058084-71058103 | Msa0747340:intron | 55.0% | |
TTCACACCCATGCTGGTCCT+GGG | - | chr5_1:71058085-71058104 | Msa0747340:intron | 55.0% | |
GCACATGAAAATCTCCGCCC+AGG | - | chr5_1:71058207-71058226 | Msa0747340:intron | 55.0% | |
ATCGGCGTGTTAGTGTCTGG+TGG | - | chr5_1:71058629-71058648 | Msa0747340:CDS | 55.0% | |
CGGATTGTTGAGGTAAGCGC+TGG | + | chr5_1:71058853-71058872 | None:intergenic | 55.0% | |
TCTCTGCAGCCGGATTGTTG+AGG | + | chr5_1:71058863-71058882 | None:intergenic | 55.0% | |
GTCCTTCGGGAAGCTTCAAC+TGG | - | chr5_1:71058949-71058968 | Msa0747340:CDS | 55.0% | |
!! | GGGTGCTGCTGCACGATTTA+TGG | - | chr5_1:71059031-71059050 | Msa0747340:CDS | 55.0% |
!! | GTTTTGGTCGCTGGTCTACC+GGG | + | chr5_1:71059825-71059844 | None:intergenic | 55.0% |
TGCCCTGCTGCAATGGGATT+TGG | - | chr5_1:71060330-71060349 | Msa0747340:CDS | 55.0% | |
! | GCTGGAACAACTGATGGACC+CGG | - | chr5_1:71060360-71060379 | Msa0747340:CDS | 55.0% |
! | GGGGAACCCTTTCTGGAAAC+TGG | - | chr5_1:71060496-71060515 | Msa0747340:intron | 55.0% |
TCACAACAATGGCTGGGAGG+CGG | - | chr5_1:71061587-71061606 | Msa0747340:intron | 55.0% | |
! | GACCACATACGAGGAGTACG+AGG | - | chr5_1:71061711-71061730 | Msa0747340:CDS | 55.0% |
CACCTCGTACTCCTCGTATG+TGG | + | chr5_1:71061716-71061735 | None:intergenic | 55.0% | |
AACGGCCAGCCTGTAGAATC+AGG | - | chr5_1:71062242-71062261 | Msa0747340:intron | 55.0% | |
GGGGTTCCATCCATCACTAC+TGG | + | chr5_1:71062314-71062333 | None:intergenic | 55.0% | |
!! | GTGATGGATGGAACCCCTCT+TGG | - | chr5_1:71062317-71062336 | Msa0747340:intron | 55.0% |
ACACCAGGAGCTACATCCTG+TGG | + | chr5_1:71062602-71062621 | None:intergenic | 55.0% | |
TCACACCCATGCTGGTCCTG+GGG | - | chr5_1:71058086-71058105 | Msa0747340:intron | 60.0% | |
ATACCCCCCAGGACCAGCAT+GGG | + | chr5_1:71058094-71058113 | None:intergenic | 60.0% | |
CTGGTCTACCGGGAGGAGAT+TGG | + | chr5_1:71059815-71059834 | None:intergenic | 60.0% | |
TTATGCTATGGCCGGGGACC+TGG | - | chr5_1:71060023-71060042 | Msa0747340:intron | 60.0% | |
TATGCTATGGCCGGGGACCT+GGG | - | chr5_1:71060024-71060043 | Msa0747340:intron | 60.0% | |
GGTTGCGGGCCTGATTCTAC+AGG | + | chr5_1:71062254-71062273 | None:intergenic | 60.0% | |
TCCAGGAGGTCTGGTGGTTG+CGG | + | chr5_1:71062269-71062288 | None:intergenic | 60.0% | |
TGCTTGTCCAGGAGGTCTGG+TGG | + | chr5_1:71062275-71062294 | None:intergenic | 60.0% | |
CACACCCATGCTGGTCCTGG+GGG | - | chr5_1:71058087-71058106 | Msa0747340:intron | 65.0% | |
ACACCCATGCTGGTCCTGGG+GGG | - | chr5_1:71058088-71058107 | Msa0747340:intron | 65.0% | |
GATACCCCCCAGGACCAGCA+TGG | + | chr5_1:71058095-71058114 | None:intergenic | 65.0% | |
! | TTGGTCGCTGGTCTACCGGG+AGG | + | chr5_1:71059822-71059841 | None:intergenic | 65.0% |
GCGGGCCTGATTCTACAGGC+TGG | + | chr5_1:71062250-71062269 | None:intergenic | 65.0% | |
CCAGGAGGTCTGGTGGTTGC+GGG | + | chr5_1:71062268-71062287 | None:intergenic | 65.0% | |
CCCGCAACCACCAGACCTCC+TGG | - | chr5_1:71062265-71062284 | Msa0747340:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 71056250 | 71062946 | 71056250 | ID=Msa0747340;Name=Msa0747340 |
chr5_1 | mRNA | 71056250 | 71062946 | 71056250 | ID=Msa0747340-mRNA-1;Parent=Msa0747340;Name=Msa0747340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=336|1|1|1|0.88|0.8|10|231|778 |
chr5_1 | exon | 71056250 | 71057032 | 71056250 | ID=Msa0747340-mRNA-1:exon:21028;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71057449 | 71057612 | 71057449 | ID=Msa0747340-mRNA-1:exon:21027;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71058104 | 71058167 | 71058104 | ID=Msa0747340-mRNA-1:exon:21026;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71058574 | 71058699 | 71058574 | ID=Msa0747340-mRNA-1:exon:21025;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71058783 | 71059050 | 71058783 | ID=Msa0747340-mRNA-1:exon:21024;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71059151 | 71059415 | 71059151 | ID=Msa0747340-mRNA-1:exon:21023;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71060035 | 71060379 | 71060035 | ID=Msa0747340-mRNA-1:exon:21022;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71060947 | 71061155 | 71060947 | ID=Msa0747340-mRNA-1:exon:21021;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71061613 | 71062030 | 71061613 | ID=Msa0747340-mRNA-1:exon:21020;Parent=Msa0747340-mRNA-1 |
chr5_1 | exon | 71062685 | 71062946 | 71062685 | ID=Msa0747340-mRNA-1:exon:21019;Parent=Msa0747340-mRNA-1 |
chr5_1 | five_prime_UTR | 71062685 | 71062946 | 71062685 | ID=Msa0747340-mRNA-1:five_prime_utr;Parent=Msa0747340-mRNA-1 |
chr5_1 | five_prime_UTR | 71061957 | 71062030 | 71061957 | ID=Msa0747340-mRNA-1:five_prime_utr;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71061613 | 71061956 | 71061613 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71060947 | 71061155 | 71060947 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71060035 | 71060379 | 71060035 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71059151 | 71059415 | 71059151 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71058783 | 71059050 | 71058783 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71058574 | 71058699 | 71058574 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71058104 | 71058167 | 71058104 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71057449 | 71057612 | 71057449 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | CDS | 71056481 | 71057032 | 71056481 | ID=Msa0747340-mRNA-1:cds;Parent=Msa0747340-mRNA-1 |
chr5_1 | three_prime_UTR | 71056250 | 71056480 | 71056250 | ID=Msa0747340-mRNA-1:three_prime_utr;Parent=Msa0747340-mRNA-1 |
Gene Sequence |
Protein sequence |