Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0825540 | XP_003617915.2 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0825540 | sp|F4HQM3|NCER1_ARATH | 74.131 | 777 | 196 | 4 | 6 | 777 | 3 | 779 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0825540 | G7K4V4 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0747340 | Msa0825540 | 0.998640 | 2.222123e-271 | -8.615850e-47 |
Msa0788300 | Msa0825540 | 0.878112 | 3.653566e-69 | -8.615850e-47 |
Msa0825540 | Msa0864580 | 0.995314 | 4.808614e-215 | -8.615850e-47 |
Msa0825540 | Msa1384660 | 0.999233 | 1.719359e-297 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0825540 | MtrunA17_Chr5g0447261 | 98.843 | 778 | 9 | 0 | 1 | 778 | 1 | 778 | 0.0 | 1603 |
Msa0825540 | MtrunA17_Chr3g0103491 | 75.679 | 810 | 161 | 4 | 1 | 776 | 1 | 808 | 0.0 | 1260 |
Msa0825540 | MtrunA17_Chr3g0118451 | 58.155 | 748 | 248 | 11 | 37 | 776 | 23 | 713 | 0.0 | 849 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0825540 | AT1G07380.2 | 74.103 | 780 | 194 | 5 | 6 | 777 | 1 | 780 | 0.0 | 1193 |
Msa0825540 | AT1G07380.1 | 74.131 | 777 | 196 | 4 | 6 | 777 | 3 | 779 | 0.0 | 1192 |
Msa0825540 | AT2G38010.3 | 73.919 | 740 | 181 | 5 | 40 | 776 | 26 | 756 | 0.0 | 1141 |
Msa0825540 | AT2G38010.1 | 73.919 | 740 | 181 | 5 | 40 | 776 | 26 | 756 | 0.0 | 1140 |
Msa0825540 | AT2G38010.2 | 70.581 | 775 | 181 | 6 | 40 | 776 | 26 | 791 | 0.0 | 1122 |
Msa0825540 | AT5G58980.1 | 71.930 | 741 | 169 | 8 | 39 | 776 | 28 | 732 | 0.0 | 1102 |
Find 240 sgRNAs with CRISPR-Local
Find 489 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATTATTAATATATAATT+TGG | 0.069131 | 5_3:-65425085 | Msa0825540:three_prime_UTR |
TGAATGAAGGTTCCTAATTT+TGG | 0.113917 | 5_3:+65431603 | None:intergenic |
TGTATCAGGGGAACCCTTTC+TGG | 0.155421 | 5_3:-65427362 | Msa0825540:intron |
GGAGCTGCAAAGGGTTTATT+AGG | 0.162179 | 5_3:-65425211 | Msa0825540:CDS |
ACCCCTCTTGGTGCAAGTTT+TGG | 0.167335 | 5_3:-65425523 | Msa0825540:CDS |
GGGTGCTGCTGCACGATTTA+TGG | 0.180402 | 5_3:-65428820 | Msa0825540:CDS |
ATTAATTAGTGGGGATAATA+AGG | 0.182190 | 5_3:-65428841 | Msa0825540:CDS |
TAGGGTGCTTCCACACTTTA+TGG | 0.192040 | 5_3:-65425691 | Msa0825540:CDS |
CTTGGAAAATTGGTCTTTCT+TGG | 0.231444 | 5_3:-65430662 | Msa0825540:five_prime_UTR |
AACCGTATCACCTCTCTTAA+AGG | 0.249905 | 5_3:+65425468 | None:intergenic |
ACTGCCCAATTCGGAGGATT+TGG | 0.253488 | 5_3:+65426806 | None:intergenic |
TTGCATCTGGGGTTCACTTT+AGG | 0.253795 | 5_3:-65430412 | Msa0825540:CDS |
AGGATCAATATTTGTCAATA+AGG | 0.253952 | 5_3:-65429624 | Msa0825540:CDS |
AAGCATGCAATTCCAAAATT+AGG | 0.262551 | 5_3:-65431615 | None:intergenic |
TCACCAGTATCAAGCAAAAT+AGG | 0.268049 | 5_3:+65427276 | None:intergenic |
GGGTCAATTCGTCACTTTAC+AGG | 0.270731 | 5_3:-65425190 | Msa0825540:CDS |
TTTGAAAGTACACGTATTAT+AGG | 0.273468 | 5_3:-65427692 | Msa0825540:CDS |
TGCCCTGCTGCAATGGGATT+TGG | 0.283733 | 5_3:-65427521 | Msa0825540:CDS |
GTATACAGAATAAAACATTT+TGG | 0.293949 | 5_3:-65425232 | Msa0825540:CDS |
TTGAAAGTACACGTATTATA+GGG | 0.295150 | 5_3:-65427691 | Msa0825540:CDS |
AATACGATAAATAAATAAAT+AGG | 0.312744 | 5_3:-65431580 | Msa0825540:five_prime_UTR |
CACTCTCTAACTTGAATGTT+TGG | 0.315163 | 5_3:-65430598 | Msa0825540:CDS |
ATTCACACCCATGCTGGTCC+TGG | 0.316768 | 5_3:-65429767 | Msa0825540:CDS |
CCAGGAGGTCTGGTGGTTGC+GGG | 0.317859 | 5_3:+65425587 | None:intergenic |
TTCTAGCAGTGGAGCTTCTA+AGG | 0.320178 | 5_3:-65427555 | Msa0825540:CDS |
ACCGGCTAAGCTTGGAAAAT+TGG | 0.327940 | 5_3:-65430672 | Msa0825540:five_prime_UTR |
AACATTCATGTTGTTATAGC+AGG | 0.333161 | 5_3:-65426191 | Msa0825540:CDS |
CGTGTACTTTCAAATTCATC+TGG | 0.337017 | 5_3:+65427701 | None:intergenic |
TAGGTTTGTTAACCTGTCTA+AGG | 0.340793 | 5_3:+65427976 | None:intergenic |
TCTAGCAACACTTGAAGTTT+TGG | 0.340869 | 5_3:+65428013 | None:intergenic |
GGAGCATCTGAACAGATTAA+AGG | 0.342606 | 5_3:-65427632 | Msa0825540:CDS |
CCAATCCAAATCCTCCGAAT+TGG | 0.345676 | 5_3:-65426811 | Msa0825540:CDS |
CCCACACTTGCTGCAAGCTT+TGG | 0.346712 | 5_3:-65431416 | Msa0825540:five_prime_UTR |
TTCACACCCATGCTGGTCCT+GGG | 0.349429 | 5_3:-65429766 | Msa0825540:CDS |
AACACAGAGCAGATTGCATC+TGG | 0.359080 | 5_3:-65430425 | Msa0825540:CDS |
TCATTTGATGCCCTTGTTGA+TGG | 0.361338 | 5_3:-65429689 | Msa0825540:CDS |
GAAAATAATGTAGCGATTAG+TGG | 0.362437 | 5_3:-65429791 | Msa0825540:CDS |
GTCCTTCGGGAAGCTTCAAC+TGG | 0.364059 | 5_3:-65428902 | Msa0825540:CDS |
TTATGCTATGGCCGGGGACC+TGG | 0.366600 | 5_3:-65427828 | Msa0825540:CDS |
GATTCATTCTACACGTTCAA+TGG | 0.367273 | 5_3:-65425119 | Msa0825540:three_prime_UTR |
TCCAGGAGGTCTGGTGGTTG+CGG | 0.375652 | 5_3:+65425586 | None:intergenic |
ATCTCCAAGGGAAGGATACT+TGG | 0.377460 | 5_3:-65425375 | Msa0825540:CDS |
TTATTATTAATATATAATTT+GGG | 0.377477 | 5_3:-65425084 | Msa0825540:three_prime_UTR |
ATTTGGATTGGAAGTATAGT+AGG | 0.379596 | 5_3:+65426823 | None:intergenic |
TGTAACTACTTGATTGGTCT+TGG | 0.380743 | 5_3:-65430500 | Msa0825540:CDS |
AAATGAAGCTTCCATATGAT+TGG | 0.381567 | 5_3:-65427254 | Msa0825540:CDS |
TTGCCGAGCCTAAGGGTAAT+AGG | 0.383793 | 5_3:-65430367 | Msa0825540:CDS |
AAAGATCACAACTTTACATC+TGG | 0.384903 | 5_3:-65431365 | Msa0825540:five_prime_UTR |
GGGGAACCCTTTCTGGAAAC+TGG | 0.385318 | 5_3:-65427355 | Msa0825540:CDS |
TGGTACAGATCATGAATTAC+TGG | 0.387161 | 5_3:-65428078 | Msa0825540:intron |
TCTGTAAAGAATTTGTGATA+TGG | 0.389696 | 5_3:+65424966 | None:intergenic |
ATTTGCTTGTCCAGGAGGTC+TGG | 0.390871 | 5_3:+65425577 | None:intergenic |
TTTCTTGGTTGATTTGAACT+TGG | 0.391219 | 5_3:-65430647 | Msa0825540:five_prime_UTR |
CACATTGAGTGCATACATTC+AGG | 0.395769 | 5_3:-65425662 | Msa0825540:CDS |
TGTTAATCTCGATGCTTGTA+TGG | 0.396574 | 5_3:-65430336 | Msa0825540:CDS |
CAAAATGCAGATACAAATCT+AGG | 0.397406 | 5_3:+65427957 | None:intergenic |
CTTACGATTATTATGAAGAC+TGG | 0.397476 | 5_3:+65428707 | None:intergenic |
CAGGCTATTTGTTCCTTGTC+AGG | 0.400770 | 5_3:+65427312 | None:intergenic |
CCCGCAACCACCAGACCTCC+TGG | 0.403471 | 5_3:-65425587 | Msa0825540:CDS |
TGAAGTTTGTTGATGATGAA+TGG | 0.409322 | 5_3:-65428926 | Msa0825540:CDS |
AGGGAAAGAGGAGTGGAGGA+AGG | 0.409423 | 5_3:+65431502 | None:intergenic |
GGGAAAGAGGAGTGGAGGAA+GGG | 0.410269 | 5_3:+65431503 | None:intergenic |
AACGGCCAGCCTGTAGAATC+AGG | 0.412830 | 5_3:-65425610 | Msa0825540:CDS |
CATTGAGAAAAGCATTGTTC+AGG | 0.415604 | 5_3:-65429666 | Msa0825540:CDS |
TTCTTGGTTGATTTGAACTT+GGG | 0.415988 | 5_3:-65430646 | Msa0825540:five_prime_UTR |
GCATATTGTAACTACTTGAT+TGG | 0.417734 | 5_3:-65430506 | Msa0825540:CDS |
TGTGTATATTGTAACATCTC+TGG | 0.423896 | 5_3:-65429726 | Msa0825540:CDS |
CAATCCAAATCCTCCGAATT+GGG | 0.426759 | 5_3:-65426810 | Msa0825540:CDS |
CTGGTCTACCGGGAGGAGAT+TGG | 0.427326 | 5_3:+65428039 | None:intergenic |
TATTTATCGTATTTGAATGA+AGG | 0.427474 | 5_3:+65431590 | None:intergenic |
GAAGTTTGTTGATGATGAAT+GGG | 0.427897 | 5_3:-65428925 | Msa0825540:CDS |
GATGATGAATGGGGTCCTTC+GGG | 0.429393 | 5_3:-65428915 | Msa0825540:CDS |
TGATGATGAATGGGGTCCTT+CGG | 0.430776 | 5_3:-65428916 | Msa0825540:CDS |
TTTCTGCAACTATGACAGTT+TGG | 0.431693 | 5_3:-65430571 | Msa0825540:CDS |
ATGGGATTTGGATTTGCTGC+TGG | 0.434763 | 5_3:-65427509 | Msa0825540:CDS |
GACCTCCTGGACAAGCAAAT+AGG | 0.436248 | 5_3:-65425574 | Msa0825540:CDS |
CTTGGAAGCTATGACATTAC+CGG | 0.440574 | 5_3:-65430482 | Msa0825540:CDS |
TCTGTAAGAAAGGATTCTGT+TGG | 0.442056 | 5_3:-65428774 | Msa0825540:CDS |
GAGCTGCAAAGGGTTTATTA+GGG | 0.442673 | 5_3:-65425210 | Msa0825540:CDS |
TAACTTACAGCCCAATCATA+TGG | 0.442820 | 5_3:+65427243 | None:intergenic |
CAGTGAAGACAGTGCTAAGC+GGG | 0.445447 | 5_3:-65426232 | Msa0825540:CDS |
TTATTGACAAATATTGATCC+TGG | 0.451580 | 5_3:+65429626 | None:intergenic |
AAAATGTACCTTCGGTCATA+AGG | 0.452052 | 5_3:+65425410 | None:intergenic |
GGATCAATATTTGTCAATAA+GGG | 0.454815 | 5_3:-65429623 | Msa0825540:intron |
GGAAAGAGGAGTGGAGGAAG+GGG | 0.456676 | 5_3:+65431504 | None:intergenic |
AGTGATGATGAAAGGGAAAG+AGG | 0.460705 | 5_3:+65431490 | None:intergenic |
CTGGGGTTCACTTTAGGTTG+CGG | 0.461071 | 5_3:-65430406 | Msa0825540:CDS |
TAATCCAGTGTCTGTACAAA+AGG | 0.461471 | 5_3:+65427893 | None:intergenic |
TGAAGGGAAATGAGAAGAAC+CGG | 0.462467 | 5_3:-65430690 | Msa0825540:intron |
ACAGAATTCACAACAATGGC+TGG | 0.467317 | 5_3:-65426272 | Msa0825540:intron |
TTGCTTAAAATCAAATGCTC+CGG | 0.467520 | 5_3:+65427472 | None:intergenic |
TCTGTTGGATTTGAAGATGA+TGG | 0.467803 | 5_3:-65428759 | Msa0825540:CDS |
GTATCAAGCAAAATAGGCTT+TGG | 0.468390 | 5_3:+65427282 | None:intergenic |
GGTTGCGGGCCTGATTCTAC+AGG | 0.469785 | 5_3:+65425601 | None:intergenic |
AGAAACATTTACCTCGAGCT+TGG | 0.469793 | 5_3:+65427574 | None:intergenic |
TTAATTAGTGGGGATAATAA+GGG | 0.471161 | 5_3:-65428840 | Msa0825540:CDS |
TACGGACCAGTTTCCAGAAA+GGG | 0.471355 | 5_3:+65427349 | None:intergenic |
AAAGACATGCCCTGCTGCAA+TGG | 0.471735 | 5_3:-65427528 | Msa0825540:CDS |
GATGTTAGTCCGAATGTACT+TGG | 0.472336 | 5_3:-65427918 | Msa0825540:CDS |
AGAATACATAAATTAAATCA+AGG | 0.472911 | 5_3:-65425039 | Msa0825540:three_prime_UTR |
GTAAGCCTATTTGCTTGTCC+AGG | 0.474340 | 5_3:+65425569 | None:intergenic |
TAAATAAATAAATAGGAGGA+AGG | 0.475977 | 5_3:-65431573 | Msa0825540:five_prime_UTR |
TGGTATTCTCCATTCTATTG+TGG | 0.476390 | 5_3:+65425273 | None:intergenic |
CACCTTTAAGAGAGGTGATA+CGG | 0.479332 | 5_3:-65425470 | Msa0825540:CDS |
GTACAAATTCATTAATTAGT+GGG | 0.481029 | 5_3:-65428851 | Msa0825540:CDS |
AATCCAAATCCCATTGCAGC+AGG | 0.482843 | 5_3:+65427518 | None:intergenic |
AAGACATGCCCTGCTGCAAT+GGG | 0.483175 | 5_3:-65427527 | Msa0825540:CDS |
TAGAGAAAGTGATGATGAAA+GGG | 0.490877 | 5_3:+65431483 | None:intergenic |
ATAGTAAAGCCACAATAGAA+TGG | 0.492162 | 5_3:-65425282 | Msa0825540:CDS |
CTGCACGATTTATGGAAGAC+TGG | 0.492992 | 5_3:-65428812 | Msa0825540:CDS |
TGAGAAGAACCGGCTAAGCT+TGG | 0.493720 | 5_3:-65430680 | Msa0825540:five_prime_UTR |
CTAGAGAAAGTGATGATGAA+AGG | 0.493970 | 5_3:+65431482 | None:intergenic |
CGGATTGTTGAGGTAAGCGC+TGG | 0.494389 | 5_3:+65429001 | None:intergenic |
CTCTAACTTGAATGTTTGGA+GGG | 0.494796 | 5_3:-65430594 | Msa0825540:CDS |
TCACACCCATGCTGGTCCTG+GGG | 0.495121 | 5_3:-65429765 | Msa0825540:CDS |
CAAAAGGCTCCAAGTACATT+CGG | 0.495399 | 5_3:+65427909 | None:intergenic |
AATAGGCTTTGGCTGCTGAC+AGG | 0.497624 | 5_3:+65427293 | None:intergenic |
CACATACTGTGAATAAGTAT+TGG | 0.499983 | 5_3:+65426163 | None:intergenic |
GAATGAGTTATGCTATGGCC+GGG | 0.500547 | 5_3:-65427835 | Msa0825540:CDS |
CACCAGAGAAAATGTACCTT+CGG | 0.503106 | 5_3:+65425402 | None:intergenic |
GTTAACATCAGCTGCAGGAC+CGG | 0.503541 | 5_3:+65430463 | None:intergenic |
TCTCTAACTTGAATGTTTGG+AGG | 0.504431 | 5_3:-65430595 | Msa0825540:CDS |
CGTACAAATTCATTAATTAG+TGG | 0.509704 | 5_3:-65428852 | Msa0825540:CDS |
ACCAAAGCTTGCAGCAAGTG+TGG | 0.510651 | 5_3:+65431415 | None:intergenic |
TGCAGCTGATGTTAACATGA+TGG | 0.511060 | 5_3:-65430456 | Msa0825540:CDS |
GAACCCAAGTATCCTTCCCT+TGG | 0.511188 | 5_3:+65425371 | None:intergenic |
TTTGCTGCTGGAACAACTGA+TGG | 0.511314 | 5_3:-65427497 | Msa0825540:CDS |
CTATGAGTACTGAGTTTGAA+AGG | 0.511908 | 5_3:+65425301 | None:intergenic |
AGAATGAGTTATGCTATGGC+CGG | 0.513372 | 5_3:-65427836 | Msa0825540:CDS |
TATTTGCTTCTCTCTGCAGC+CGG | 0.515049 | 5_3:+65428981 | None:intergenic |
TGTAAGAGGTGCCCTTAGAC+AGG | 0.516528 | 5_3:-65427988 | Msa0825540:CDS |
TTCAACTGGTTTGCTACTCA+TGG | 0.520824 | 5_3:-65428888 | Msa0825540:CDS |
AAAGCAGTGGAGCTATTCAA+TGG | 0.522635 | 5_3:-65427653 | Msa0825540:CDS |
GCGGGCCTGATTCTACAGGC+TGG | 0.526732 | 5_3:+65425605 | None:intergenic |
CCAATTCGGAGGATTTGGAT+TGG | 0.527785 | 5_3:+65426811 | None:intergenic |
GGGGTTCCATCCATCACTAC+TGG | 0.531201 | 5_3:+65425541 | None:intergenic |
TGCTTAAAATCAAATGCTCC+GGG | 0.533187 | 5_3:+65427473 | None:intergenic |
CTAAGCGGGGACAAAAGCTT+AGG | 0.537641 | 5_3:-65426218 | Msa0825540:CDS |
TGAAAGGGAAAGAGGAGTGG+AGG | 0.539343 | 5_3:+65431498 | None:intergenic |
AAATCATCATCGTCATAAGC+AGG | 0.542582 | 5_3:+65425349 | None:intergenic |
ATTATGTTTGAAATTCTTCG+AGG | 0.543415 | 5_3:+65428732 | None:intergenic |
GTACGAGGTGCAAAGATATG+AGG | 0.544022 | 5_3:-65426126 | Msa0825540:intron |
TAAATAATTACCCAGGTCCC+CGG | 0.546403 | 5_3:+65427817 | None:intergenic |
CATTCAAGTTAGAGAGTGAA+GGG | 0.548327 | 5_3:+65430603 | None:intergenic |
CCCCAAAACTTGCACCAAGA+GGG | 0.548804 | 5_3:+65425521 | None:intergenic |
GTTAATCTCGATGCTTGTAT+GGG | 0.551831 | 5_3:-65430335 | Msa0825540:CDS |
TTACGGACCAGTTTCCAGAA+AGG | 0.552216 | 5_3:+65427348 | None:intergenic |
ACATTCATGTTGTTATAGCA+GGG | 0.552414 | 5_3:-65426190 | Msa0825540:CDS |
TACAAATTCATTAATTAGTG+GGG | 0.552625 | 5_3:-65428850 | Msa0825540:CDS |
AGTGGAATTCACACCCATGC+TGG | 0.553562 | 5_3:-65429773 | Msa0825540:CDS |
ATACCACAGGATGTAGCTCC+TGG | 0.555371 | 5_3:-65425256 | Msa0825540:CDS |
TTACTATCAAAGTACTTGAG+AGG | 0.555403 | 5_3:-65430301 | Msa0825540:CDS |
CAACAAGGGCATCAAATGAC+TGG | 0.557309 | 5_3:+65429693 | None:intergenic |
GTGTATATTGTAACATCTCT+GGG | 0.558277 | 5_3:-65429725 | Msa0825540:CDS |
ATCTGAACAGATTAAAGGAA+AGG | 0.558373 | 5_3:-65427627 | Msa0825540:CDS |
TATTGACAAATATTGATCCT+GGG | 0.561235 | 5_3:+65429627 | None:intergenic |
CATTTGTAGTAGCACACTAA+AGG | 0.561836 | 5_3:-65425156 | Msa0825540:exon |
CACAGAGCAGATTGCATCTG+GGG | 0.562906 | 5_3:-65430423 | Msa0825540:CDS |
GTGTGCGCTTCAAATGGTCA+AGG | 0.563276 | 5_3:-65425324 | Msa0825540:CDS |
TGTAGTAGCACACTAAAGGA+AGG | 0.563282 | 5_3:-65425152 | Msa0825540:exon |
AAGATCACAACTTTACATCT+GGG | 0.565090 | 5_3:-65431364 | Msa0825540:five_prime_UTR |
CAGCGCTTACCTCAACAATC+CGG | 0.567342 | 5_3:-65429000 | Msa0825540:CDS |
TGATGAAAGGGAAAGAGGAG+TGG | 0.567615 | 5_3:+65431495 | None:intergenic |
GCAGCTGATGTTAACATGAT+GGG | 0.567890 | 5_3:-65430455 | Msa0825540:CDS |
ACGATAAATAAATAAATAGG+AGG | 0.567913 | 5_3:-65431577 | Msa0825540:five_prime_UTR |
TATGCTATGGCCGGGGACCT+GGG | 0.569494 | 5_3:-65427827 | Msa0825540:intron |
TCACAACAATGGCTGGGAGG+CGG | 0.569943 | 5_3:-65426265 | Msa0825540:CDS |
AGTGTTGCTAGACGTGTAAG+AGG | 0.571419 | 5_3:-65428002 | Msa0825540:CDS |
CTTACTAACACCAGTAGTGA+TGG | 0.571782 | 5_3:-65425551 | Msa0825540:CDS |
CGTATCACCTCTCTTAAAGG+TGG | 0.576466 | 5_3:+65425471 | None:intergenic |
ATCATGTTAACATCAGCTGC+AGG | 0.578755 | 5_3:+65430458 | None:intergenic |
GCACATGAAAATCTCCGCCC+AGG | 0.580646 | 5_3:-65429644 | Msa0825540:CDS |
TTTATTGTTGCCGAGCCTAA+GGG | 0.580712 | 5_3:-65430374 | Msa0825540:CDS |
ACACAGAGCAGATTGCATCT+GGG | 0.581328 | 5_3:-65430424 | Msa0825540:CDS |
TTCAATCACAGCACATGTGG+GGG | 0.582383 | 5_3:-65427861 | Msa0825540:CDS |
AGCCTATTTGCTTGTCCAGG+AGG | 0.582673 | 5_3:+65425572 | None:intergenic |
ACATTCAAGTTAGAGAGTGA+AGG | 0.583381 | 5_3:+65430602 | None:intergenic |
GGGAAGAATGAGTTATGCTA+TGG | 0.583650 | 5_3:-65427840 | Msa0825540:CDS |
AACACTAGCCTATTACCCTT+AGG | 0.583889 | 5_3:+65430359 | None:intergenic |
AATGAAGCTTCCATATGATT+GGG | 0.584180 | 5_3:-65427253 | Msa0825540:CDS |
CTAACACCAGTAGTGATGGA+TGG | 0.584666 | 5_3:-65425547 | Msa0825540:CDS |
GTGTACTTTCAAATTCATCT+GGG | 0.585221 | 5_3:+65427702 | None:intergenic |
GACTTCAATCACAGCACATG+TGG | 0.585442 | 5_3:-65427864 | Msa0825540:CDS |
CGGTCATAAGGTCATTTCGA+GGG | 0.585678 | 5_3:+65425422 | None:intergenic |
CCAAAGCTTGCAGCAAGTGT+GGG | 0.588327 | 5_3:+65431416 | None:intergenic |
CACCTCGTACTCCTCGTATG+TGG | 0.589423 | 5_3:+65426139 | None:intergenic |
GCATCATTCCAATCTCCTCC+CGG | 0.589478 | 5_3:-65428047 | Msa0825540:CDS |
CTCTGGTGGAATATCTCCAA+GGG | 0.591674 | 5_3:-65425387 | Msa0825540:CDS |
TGAACAGATTAAAGGAAAGG+TGG | 0.591836 | 5_3:-65427624 | Msa0825540:CDS |
AAGACAGACAGACAGAGTTG+TGG | 0.592859 | 5_3:+65431533 | None:intergenic |
TCTCTGGTGGAATATCTCCA+AGG | 0.594118 | 5_3:-65425388 | Msa0825540:CDS |
AGGTTTGTTAACCTGTCTAA+GGG | 0.594837 | 5_3:+65427977 | None:intergenic |
TGCTTGTCCAGGAGGTCTGG+TGG | 0.595380 | 5_3:+65425580 | None:intergenic |
ACTTCAATCACAGCACATGT+GGG | 0.598369 | 5_3:-65427863 | Msa0825540:CDS |
TCTCTGCAGCCGGATTGTTG+AGG | 0.598527 | 5_3:+65428991 | None:intergenic |
GAGGTAAATGTTTCTAGCAG+TGG | 0.603184 | 5_3:-65427566 | Msa0825540:CDS |
CACACCCATGCTGGTCCTGG+GGG | 0.603868 | 5_3:-65429764 | Msa0825540:CDS |
TGAAAGTACACGTATTATAG+GGG | 0.604050 | 5_3:-65427690 | Msa0825540:CDS |
CCCAAAACTTGCACCAAGAG+GGG | 0.604719 | 5_3:+65425522 | None:intergenic |
TCTCCAAGGGAAGGATACTT+GGG | 0.604920 | 5_3:-65425374 | Msa0825540:CDS |
CAGAATTCACAACAATGGCT+GGG | 0.606076 | 5_3:-65426271 | Msa0825540:CDS |
GTGATGGATGGAACCCCTCT+TGG | 0.606165 | 5_3:-65425535 | Msa0825540:CDS |
TTTCTCAATGCCATCAACAA+GGG | 0.607066 | 5_3:+65429679 | None:intergenic |
AATAGAATGGAGAATACCAC+AGG | 0.608925 | 5_3:-65425269 | Msa0825540:CDS |
AAATAAATAAATAGGAGGAA+GGG | 0.609810 | 5_3:-65431572 | Msa0825540:five_prime_UTR |
TCGGTCATAAGGTCATTTCG+AGG | 0.613759 | 5_3:+65425421 | None:intergenic |
TAGCCTATTACCCTTAGGCT+CGG | 0.623029 | 5_3:+65430364 | None:intergenic |
TCTGGATAACAAAGGACATG+TGG | 0.623405 | 5_3:+65425006 | None:intergenic |
GCTGGAACAACTGATGGACC+CGG | 0.623560 | 5_3:-65427491 | Msa0825540:CDS |
TACTTGAGAGGCTTAAAGCA+AGG | 0.625748 | 5_3:-65430289 | Msa0825540:intron |
TTTACTGAAAACGCCTGACA+AGG | 0.625837 | 5_3:-65427325 | Msa0825540:CDS |
AATGAGTTATGCTATGGCCG+GGG | 0.625978 | 5_3:-65427834 | Msa0825540:CDS |
GTAGTAGCACACTAAAGGAA+GGG | 0.627966 | 5_3:-65425151 | Msa0825540:exon |
CTTCAATCACAGCACATGTG+GGG | 0.630784 | 5_3:-65427862 | Msa0825540:CDS |
ACACCCATGCTGGTCCTGGG+GGG | 0.630793 | 5_3:-65429763 | Msa0825540:CDS |
TCCCCAAAACTTGCACCAAG+AGG | 0.631634 | 5_3:+65425520 | None:intergenic |
CGAAATGACCTTATGACCGA+AGG | 0.634937 | 5_3:-65425418 | Msa0825540:CDS |
TCTCTTGTGAATATTAGCCA+AGG | 0.638405 | 5_3:+65424914 | None:intergenic |
AACCAGTTGAAGCTTCCCGA+AGG | 0.641124 | 5_3:+65428900 | None:intergenic |
TTACGATTATTATGAAGACT+GGG | 0.643788 | 5_3:+65428708 | None:intergenic |
TCTGACAGAATTCACAACAA+TGG | 0.655113 | 5_3:-65426276 | Msa0825540:intron |
GGTGGAATATCTCCAAGGGA+AGG | 0.657299 | 5_3:-65425383 | Msa0825540:CDS |
AAGTTTGTTGATGATGAATG+GGG | 0.657872 | 5_3:-65428924 | Msa0825540:CDS |
ATCCAAATCCCATTGCAGCA+GGG | 0.660254 | 5_3:+65427519 | None:intergenic |
CTTGCACACGCTCTCATCAA+CGG | 0.665760 | 5_3:-65425628 | Msa0825540:CDS |
GGATTGTTGAGGTAAGCGCT+GGG | 0.676508 | 5_3:+65429002 | None:intergenic |
GACCACATACGAGGAGTACG+AGG | 0.677175 | 5_3:-65426141 | Msa0825540:CDS |
ACACCAGGAGCTACATCCTG+TGG | 0.687402 | 5_3:+65425253 | None:intergenic |
TTTATTCTTAGTGTACCAGG+AGG | 0.687580 | 5_3:-65426781 | Msa0825540:intron |
TTGGTCGCTGGTCTACCGGG+AGG | 0.688120 | 5_3:+65428032 | None:intergenic |
TCAATCACAGCACATGTGGG+GGG | 0.690919 | 5_3:-65427860 | Msa0825540:CDS |
ATCACAACTTTACATCTGGG+TGG | 0.691314 | 5_3:-65431361 | Msa0825540:intron |
ATGTATGCACTCAATGTGTG+TGG | 0.694548 | 5_3:+65425667 | None:intergenic |
TGACAAATATTGATCCTGGG+CGG | 0.695181 | 5_3:+65429630 | None:intergenic |
ACAGTATGTGACCACATACG+AGG | 0.711222 | 5_3:-65426150 | Msa0825540:CDS |
GCAGTGAAGACAGTGCTAAG+CGG | 0.712901 | 5_3:-65426233 | Msa0825540:CDS |
AGTGAAGACAGTGCTAAGCG+GGG | 0.715425 | 5_3:-65426231 | Msa0825540:CDS |
AATTCACAACAATGGCTGGG+AGG | 0.717802 | 5_3:-65426268 | Msa0825540:CDS |
GTGCTGTGATTGAAGTCACA+AGG | 0.729346 | 5_3:+65427870 | None:intergenic |
TGTGTGTGGACCATAAAGTG+TGG | 0.758656 | 5_3:+65425681 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTTTTTTTTTTTT+TGG | - | chr5_3:65429531-65429550 | Msa0825540:intron | 0.0% |
!! | TTATTATTAATATATAATTT+GGG | - | chr5_3:65431445-65431464 | Msa0825540:five_prime_UTR | 0.0% |
!! | AATACGATAAATAAATAAAT+AGG | - | chr5_3:65424949-65424968 | Msa0825540:three_prime_UTR | 10.0% |
!! | TGAAATATAAATAGAAATTT+GGG | + | chr5_3:65425365-65425384 | None:intergenic | 10.0% |
!! | ATGAAATATAAATAGAAATT+TGG | + | chr5_3:65425366-65425385 | None:intergenic | 10.0% |
!!! | TTTTTATTTTTGTTCTTTAA+TGG | - | chr5_3:65425388-65425407 | Msa0825540:CDS | 10.0% |
!!! | TTTTATTTTTGTTCTTTAAT+GGG | - | chr5_3:65425389-65425408 | Msa0825540:CDS | 10.0% |
!! | ATTTACCTTGTATTATATAT+GGG | + | chr5_3:65426377-65426396 | None:intergenic | 15.0% |
!!! | TTCAATTATTAATTGATAGT+AGG | - | chr5_3:65427893-65427912 | Msa0825540:CDS | 15.0% |
!! | ATTATCACTTATATAAAGTA+AGG | + | chr5_3:65428340-65428359 | None:intergenic | 15.0% |
!!! | TTTAATGAGTAATATTTTCT+TGG | - | chr5_3:65428361-65428380 | Msa0825540:intron | 15.0% |
!!! | TCATTTTAGTAAATTTGTAA+TGG | - | chr5_3:65429453-65429472 | Msa0825540:intron | 15.0% |
!! | ATTAATTGAATTTACTAAAG+TGG | + | chr5_3:65429513-65429532 | None:intergenic | 15.0% |
!!! | CTTAACATTTTAAAATGTAA+AGG | + | chr5_3:65429819-65429838 | None:intergenic | 15.0% |
!! | TTCAATTATTCATATTGTTA+GGG | - | chr5_3:65430820-65430839 | Msa0825540:intron | 15.0% |
!! | AGAATACATAAATTAAATCA+AGG | - | chr5_3:65431490-65431509 | Msa0825540:five_prime_UTR | 15.0% |
!! | ACAAAAAGATTTAATGAAAT+CGG | + | chr5_3:65431592-65431611 | None:intergenic | 15.0% |
!!! | ATTTCATTAAATCTTTTTGT+GGG | - | chr5_3:65431592-65431611 | Msa0825540:five_prime_UTR | 15.0% |
!! | TATTTATCGTATTTGAATGA+AGG | + | chr5_3:65424942-65424961 | None:intergenic | 20.0% |
!! | ACGATAAATAAATAAATAGG+AGG | - | chr5_3:65424952-65424971 | Msa0825540:three_prime_UTR | 20.0% |
!! | TAAATAAATAAATAGGAGGA+AGG | - | chr5_3:65424956-65424975 | Msa0825540:three_prime_UTR | 20.0% |
!! | AAATAAATAAATAGGAGGAA+GGG | - | chr5_3:65424957-65424976 | Msa0825540:three_prime_UTR | 20.0% |
!! | ATAAACACATAATTAACAGA+GGG | + | chr5_3:65425211-65425230 | None:intergenic | 20.0% |
!!! | GGAAAATTGAACTTTTTTTT+TGG | - | chr5_3:65425471-65425490 | Msa0825540:CDS | 20.0% |
!!! | CACTAACATTATTTTTAGAA+TGG | + | chr5_3:65425692-65425711 | None:intergenic | 20.0% |
!!! | CATTCTAAAAATAATGTTAG+TGG | - | chr5_3:65425690-65425709 | Msa0825540:CDS | 20.0% |
!! | GATTTACCTTGTATTATATA+TGG | + | chr5_3:65426378-65426397 | None:intergenic | 20.0% |
!!! | TTTATTTTGTTTGACAGATA+TGG | - | chr5_3:65426702-65426721 | Msa0825540:intron | 20.0% |
!! | TATCCATTATAAATACCTAA+GGG | + | chr5_3:65426960-65426979 | None:intergenic | 20.0% |
!! | TTATCCATTATAAATACCTA+AGG | + | chr5_3:65426961-65426980 | None:intergenic | 20.0% |
!!! | ACTTCATTGTTATTTAATTG+TGG | - | chr5_3:65426980-65426999 | Msa0825540:intron | 20.0% |
!!! | CTTCATTGTTATTTAATTGT+GGG | - | chr5_3:65426981-65427000 | Msa0825540:intron | 20.0% |
!! | GAAAAAGATGAAAAATCTAT+AGG | - | chr5_3:65427031-65427050 | Msa0825540:intron | 20.0% |
!! | AGATTATGAAAGAACAAAAA+AGG | + | chr5_3:65427122-65427141 | None:intergenic | 20.0% |
!! | CGTTAAATTATTATCAGTAT+CGG | - | chr5_3:65427289-65427308 | Msa0825540:CDS | 20.0% |
!! | GTACAAATTCATTAATTAGT+GGG | - | chr5_3:65427678-65427697 | Msa0825540:CDS | 20.0% |
!! | TACAAATTCATTAATTAGTG+GGG | - | chr5_3:65427679-65427698 | Msa0825540:CDS | 20.0% |
!!! | TTATTAATTGATAGTAGGTT+TGG | - | chr5_3:65427898-65427917 | Msa0825540:CDS | 20.0% |
!! | GATAGATAGTTATAACTTAT+GGG | + | chr5_3:65428128-65428147 | None:intergenic | 20.0% |
!! | AGATAGATAGTTATAACTTA+TGG | + | chr5_3:65428129-65428148 | None:intergenic | 20.0% |
!!! | TATTTTCTTGGATATGATTT+AGG | - | chr5_3:65428373-65428392 | Msa0825540:intron | 20.0% |
!!! | ATTTTCTTGGATATGATTTA+GGG | - | chr5_3:65428374-65428393 | Msa0825540:intron | 20.0% |
!! | TAATCTCACATGAAATTTAT+TGG | - | chr5_3:65428431-65428450 | Msa0825540:intron | 20.0% |
!! | TATGTAATAAATAATTACCC+AGG | + | chr5_3:65428722-65428741 | None:intergenic | 20.0% |
!! | ATATATAAGAATACAAGTCT+AGG | + | chr5_3:65429132-65429151 | None:intergenic | 20.0% |
!! | ACATAATATTCAGCATAAAA+GGG | + | chr5_3:65429312-65429331 | None:intergenic | 20.0% |
!!! | GATTAGTTATATGGTTAATT+AGG | - | chr5_3:65429356-65429375 | Msa0825540:intron | 20.0% |
!! | TTAATTAGGAAAAAAAGAGA+GGG | - | chr5_3:65429370-65429389 | Msa0825540:intron | 20.0% |
!! | AAAAAATGTAGACATACATA+TGG | + | chr5_3:65429613-65429632 | None:intergenic | 20.0% |
!!! | TACATTTTTTTTTCTTTCTG+TGG | - | chr5_3:65429623-65429642 | Msa0825540:intron | 20.0% |
!!! | TACACTATTTTTCATTGATT+CGG | + | chr5_3:65429884-65429903 | None:intergenic | 20.0% |
!!! | ATTACGATATTTTGACTATT+TGG | - | chr5_3:65429958-65429977 | Msa0825540:intron | 20.0% |
!!! | TTACGATATTTTGACTATTT+GGG | - | chr5_3:65429959-65429978 | Msa0825540:intron | 20.0% |
!! | AATGTATTAAACAAGACATT+TGG | + | chr5_3:65430089-65430108 | None:intergenic | 20.0% |
!! | TCAAATAAGTATCTTTGTAT+TGG | - | chr5_3:65430534-65430553 | Msa0825540:CDS | 20.0% |
!!! | TTAACAGAGTTTTGAAAAAA+AGG | + | chr5_3:65430749-65430768 | None:intergenic | 20.0% |
!! | CTTCAATTATTCATATTGTT+AGG | - | chr5_3:65430819-65430838 | Msa0825540:intron | 20.0% |
!!! | GTATACAGAATAAAACATTT+TGG | - | chr5_3:65431297-65431316 | Msa0825540:intron | 20.0% |
!!! | TAAAAATTTCTGGATAACAA+AGG | + | chr5_3:65431534-65431553 | None:intergenic | 20.0% |
!! | GAAAAGCAAATAAAAATTTC+TGG | + | chr5_3:65431544-65431563 | None:intergenic | 20.0% |
!!! | GATTTCATTAAATCTTTTTG+TGG | - | chr5_3:65431591-65431610 | Msa0825540:five_prime_UTR | 20.0% |
! | CATAAACACATAATTAACAG+AGG | + | chr5_3:65425212-65425231 | None:intergenic | 25.0% |
! | AATGCAGAGAATTCTAATTT+GGG | + | chr5_3:65425306-65425325 | None:intergenic | 25.0% |
! | AAATGCAGAGAATTCTAATT+TGG | + | chr5_3:65425307-65425326 | None:intergenic | 25.0% |
! | TAAACAAGGAATTCCAATTT+GGG | + | chr5_3:65425541-65425560 | None:intergenic | 25.0% |
! | AAAAACATGAAAGGTAAACA+AGG | + | chr5_3:65425555-65425574 | None:intergenic | 25.0% |
! | TTCACTCAAAAAAACATGAA+AGG | + | chr5_3:65425564-65425583 | None:intergenic | 25.0% |
!!! | GTTTGAGTGTTATTTTTTGT+AGG | - | chr5_3:65425717-65425736 | Msa0825540:intron | 25.0% |
! | TTACAATAGATTGACTATCA+AGG | - | chr5_3:65426290-65426309 | Msa0825540:intron | 25.0% |
! | ATTGACCCATATATAATACA+AGG | - | chr5_3:65426369-65426388 | Msa0825540:intron | 25.0% |
! | TGAAAAGGTCAATTTCTTAT+GGG | + | chr5_3:65426414-65426433 | None:intergenic | 25.0% |
! | ACAAAATAAAATGCAATGTC+AGG | + | chr5_3:65426692-65426711 | None:intergenic | 25.0% |
! | TATTGACAAATATTGATCCT+GGG | + | chr5_3:65426905-65426924 | None:intergenic | 25.0% |
! | TTATTGACAAATATTGATCC+TGG | + | chr5_3:65426906-65426925 | None:intergenic | 25.0% |
! | AGGATCAATATTTGTCAATA+AGG | - | chr5_3:65426905-65426924 | Msa0825540:intron | 25.0% |
! | GGATCAATATTTGTCAATAA+GGG | - | chr5_3:65426906-65426925 | Msa0825540:intron | 25.0% |
! | AATATTTGTCAATAAGGGTA+AGG | - | chr5_3:65426911-65426930 | Msa0825540:intron | 25.0% |
! | ATATTTGTCAATAAGGGTAA+GGG | - | chr5_3:65426912-65426931 | Msa0825540:intron | 25.0% |
!! | TGTCTTTGTATAGTTTTTCA+GGG | + | chr5_3:65427389-65427408 | None:intergenic | 25.0% |
!! | TTGTCTTTGTATAGTTTTTC+AGG | + | chr5_3:65427390-65427409 | None:intergenic | 25.0% |
! | CGTACAAATTCATTAATTAG+TGG | - | chr5_3:65427677-65427696 | Msa0825540:CDS | 25.0% |
! | ATTAATTAGTGGGGATAATA+AGG | - | chr5_3:65427688-65427707 | Msa0825540:CDS | 25.0% |
! | TTAATTAGTGGGGATAATAA+GGG | - | chr5_3:65427689-65427708 | Msa0825540:CDS | 25.0% |
!! | ATTATGTTTGAAATTCTTCG+AGG | + | chr5_3:65427800-65427819 | None:intergenic | 25.0% |
! | TTACGATTATTATGAAGACT+GGG | + | chr5_3:65427824-65427843 | None:intergenic | 25.0% |
! | ATATAGTATAGCTGTTCTAT+TGG | - | chr5_3:65428092-65428111 | Msa0825540:intron | 25.0% |
!! | TTTTCTTGGATATGATTTAG+GGG | - | chr5_3:65428375-65428394 | Msa0825540:intron | 25.0% |
!! | TTTGAAAGTACACGTATTAT+AGG | - | chr5_3:65428837-65428856 | Msa0825540:CDS | 25.0% |
!! | TTGAAAGTACACGTATTATA+GGG | - | chr5_3:65428838-65428857 | Msa0825540:CDS | 25.0% |
!!! | TTACTTTTTTGTGTGTATCA+GGG | - | chr5_3:65429154-65429173 | Msa0825540:intron | 25.0% |
! | GACATAATATTCAGCATAAA+AGG | + | chr5_3:65429313-65429332 | None:intergenic | 25.0% |
! | GTTAATTAGGAAAAAAAGAG+AGG | - | chr5_3:65429369-65429388 | Msa0825540:intron | 25.0% |
!!! | TTTTTTATTCTTAGTGTACC+AGG | - | chr5_3:65429745-65429764 | Msa0825540:CDS | 25.0% |
! | ATAGTCAAAATATCGTAATC+AGG | + | chr5_3:65429957-65429976 | None:intergenic | 25.0% |
! | TACATTGCAGTTCTATTATA+TGG | - | chr5_3:65430103-65430122 | Msa0825540:intron | 25.0% |
! | ATAGTAATCACAAATTTCCA+AGG | + | chr5_3:65430142-65430161 | None:intergenic | 25.0% |
! | TATCACCTATGTATTTCTTT+GGG | - | chr5_3:65430201-65430220 | Msa0825540:intron | 25.0% |
! | TCTGTAAAGAATTTGTGATA+TGG | + | chr5_3:65431566-65431585 | None:intergenic | 25.0% |
! | TAGAGAAAGTGATGATGAAA+GGG | + | chr5_3:65425049-65425068 | None:intergenic | 30.0% |
AAAGATCACAACTTTACATC+TGG | - | chr5_3:65425164-65425183 | Msa0825540:CDS | 30.0% | |
AAGATCACAACTTTACATCT+GGG | - | chr5_3:65425165-65425184 | Msa0825540:CDS | 30.0% | |
TTGGGAGGTTAATTAATCAT+GGG | + | chr5_3:65425288-65425307 | None:intergenic | 30.0% | |
TTTGGGAGGTTAATTAATCA+TGG | + | chr5_3:65425289-65425308 | None:intergenic | 30.0% | |
! | TTTTGTTCTTTAATGGGAAC+TGG | - | chr5_3:65425395-65425414 | Msa0825540:CDS | 30.0% |
TTTGTTCTTTAATGGGAACT+GGG | - | chr5_3:65425396-65425415 | Msa0825540:CDS | 30.0% | |
GAATTCATCAATCATGGTTA+TGG | + | chr5_3:65425519-65425538 | None:intergenic | 30.0% | |
ATTTGGGAATTCATCAATCA+TGG | + | chr5_3:65425525-65425544 | None:intergenic | 30.0% | |
TGATTGATGAATTCCCAAAT+TGG | - | chr5_3:65425525-65425544 | Msa0825540:CDS | 30.0% | |
GTAAACAAGGAATTCCAATT+TGG | + | chr5_3:65425542-65425561 | None:intergenic | 30.0% | |
! | GTTTTGTGAGTGACTAAATT+AGG | + | chr5_3:65425616-65425635 | None:intergenic | 30.0% |
! | AAATTTCTGAGGACCAAATT+GGG | - | chr5_3:65425760-65425779 | Msa0825540:intron | 30.0% |
AAAAAGAGTAAACCCCAATT+TGG | + | chr5_3:65425776-65425795 | None:intergenic | 30.0% | |
!! | TTTGTGTGTTTGATTTGTGA+AGG | - | chr5_3:65425822-65425841 | Msa0825540:intron | 30.0% |
!! | TTGTGTGTTTGATTTGTGAA+GGG | - | chr5_3:65425823-65425842 | Msa0825540:intron | 30.0% |
!! | TTTCTTGGTTGATTTGAACT+TGG | - | chr5_3:65425882-65425901 | Msa0825540:intron | 30.0% |
!! | TTCTTGGTTGATTTGAACTT+GGG | - | chr5_3:65425883-65425902 | Msa0825540:intron | 30.0% |
GCATATTGTAACTACTTGAT+TGG | - | chr5_3:65426023-65426042 | Msa0825540:intron | 30.0% | |
! | TTACTATCAAAGTACTTGAG+AGG | - | chr5_3:65426228-65426247 | Msa0825540:CDS | 30.0% |
CTGAAAAGGTCAATTTCTTA+TGG | + | chr5_3:65426415-65426434 | None:intergenic | 30.0% | |
! | GAAATTGACCTTTTCAGAAT+AGG | - | chr5_3:65426418-65426437 | Msa0825540:intron | 30.0% |
GAAAATAATGTAGCGATTAG+TGG | - | chr5_3:65426738-65426757 | Msa0825540:intron | 30.0% | |
TGTGTATATTGTAACATCTC+TGG | - | chr5_3:65426803-65426822 | Msa0825540:CDS | 30.0% | |
GTGTATATTGTAACATCTCT+GGG | - | chr5_3:65426804-65426823 | Msa0825540:CDS | 30.0% | |
CTTCCCTTAGGTATTTATAA+TGG | - | chr5_3:65426954-65426973 | Msa0825540:intron | 30.0% | |
!!! | TCAGTTTTAGCTTTACCTTT+TGG | - | chr5_3:65427065-65427084 | Msa0825540:intron | 30.0% |
CATAGACAATTGAAACCAAA+AGG | + | chr5_3:65427083-65427102 | None:intergenic | 30.0% | |
TTTAACGTAATGACATGTGT+CGG | + | chr5_3:65427276-65427295 | None:intergenic | 30.0% | |
AATTTCTATGATACAAGCAG+GGG | + | chr5_3:65427360-65427379 | None:intergenic | 30.0% | |
CAATTTCTATGATACAAGCA+GGG | + | chr5_3:65427361-65427380 | None:intergenic | 30.0% | |
TCAATTTCTATGATACAAGC+AGG | + | chr5_3:65427362-65427381 | None:intergenic | 30.0% | |
AACCATGAAATATCACCAAA+GGG | + | chr5_3:65427449-65427468 | None:intergenic | 30.0% | |
ATATTTCATCTTCTTCTTGC+AGG | - | chr5_3:65427473-65427492 | Msa0825540:CDS | 30.0% | |
!! | TGAAGTTTGTTGATGATGAA+TGG | - | chr5_3:65427603-65427622 | Msa0825540:CDS | 30.0% |
!! | GAAGTTTGTTGATGATGAAT+GGG | - | chr5_3:65427604-65427623 | Msa0825540:CDS | 30.0% |
!! | AAGTTTGTTGATGATGAATG+GGG | - | chr5_3:65427605-65427624 | Msa0825540:CDS | 30.0% |
CTTACGATTATTATGAAGAC+TGG | + | chr5_3:65427825-65427844 | None:intergenic | 30.0% | |
CGTAAGCTCTTTAATGTATT+TGG | - | chr5_3:65427839-65427858 | Msa0825540:CDS | 30.0% | |
TTATCACCCCAAAAAAGAAT+CGG | + | chr5_3:65428028-65428047 | None:intergenic | 30.0% | |
! | CTTGCACTAATTTTGTTCTT+TGG | - | chr5_3:65428178-65428197 | Msa0825540:intron | 30.0% |
CAAAATGCAGATACAAATCT+AGG | + | chr5_3:65428575-65428594 | None:intergenic | 30.0% | |
! | GCATTTTGTCAATCAAATTG+CGG | - | chr5_3:65428587-65428606 | Msa0825540:intron | 30.0% |
AGGTAATTTATAGTAATCGC+TGG | + | chr5_3:65428782-65428801 | None:intergenic | 30.0% | |
GCAATATTAGTTACAACAAG+AGG | + | chr5_3:65428802-65428821 | None:intergenic | 30.0% | |
GTGTACTTTCAAATTCATCT+GGG | + | chr5_3:65428830-65428849 | None:intergenic | 30.0% | |
! | TGAAAGTACACGTATTATAG+GGG | - | chr5_3:65428839-65428858 | Msa0825540:CDS | 30.0% |
ATCTGAACAGATTAAAGGAA+AGG | - | chr5_3:65428902-65428921 | Msa0825540:CDS | 30.0% | |
TTGCTTAAAATCAAATGCTC+CGG | + | chr5_3:65429060-65429079 | None:intergenic | 30.0% | |
! | GAATACAAGTCTAGGATAAT+GGG | + | chr5_3:65429124-65429143 | None:intergenic | 30.0% |
! | AGAATACAAGTCTAGGATAA+TGG | + | chr5_3:65429125-65429144 | None:intergenic | 30.0% |
!!! | CTTACTTTTTTGTGTGTATC+AGG | - | chr5_3:65429153-65429172 | Msa0825540:intron | 30.0% |
!!! | TACTTTTTTGTGTGTATCAG+GGG | - | chr5_3:65429155-65429174 | Msa0825540:intron | 30.0% |
AAATGAAGCTTCCATATGAT+TGG | - | chr5_3:65429275-65429294 | Msa0825540:intron | 30.0% | |
AATGAAGCTTCCATATGATT+GGG | - | chr5_3:65429276-65429295 | Msa0825540:intron | 30.0% | |
AAAAAGAGAGGGAAGATTAA+TGG | - | chr5_3:65429381-65429400 | Msa0825540:intron | 30.0% | |
AAGTCATCAAATACATGTCT+TGG | + | chr5_3:65429590-65429609 | None:intergenic | 30.0% | |
! | ATTTGGATTGGAAGTATAGT+AGG | + | chr5_3:65429709-65429728 | None:intergenic | 30.0% |
GAATAAAAAACTGCCCAATT+CGG | + | chr5_3:65429735-65429754 | None:intergenic | 30.0% | |
!!! | ATGGTCATTTTTCTTTTCCT+TGG | - | chr5_3:65430122-65430141 | Msa0825540:intron | 30.0% |
CAAAGAAATACATAGGTGAT+AGG | + | chr5_3:65430202-65430221 | None:intergenic | 30.0% | |
CTATCACCTATGTATTTCTT+TGG | - | chr5_3:65430200-65430219 | Msa0825540:intron | 30.0% | |
AACATTCATGTTGTTATAGC+AGG | - | chr5_3:65430338-65430357 | Msa0825540:CDS | 30.0% | |
ACATTCATGTTGTTATAGCA+GGG | - | chr5_3:65430339-65430358 | Msa0825540:CDS | 30.0% | |
CACATACTGTGAATAAGTAT+TGG | + | chr5_3:65430369-65430388 | None:intergenic | 30.0% | |
TTGCTACTGCAATCTAAAAA+AGG | + | chr5_3:65430461-65430480 | None:intergenic | 30.0% | |
ATACAAGTACTCTATATGCT+AGG | + | chr5_3:65430598-65430617 | None:intergenic | 30.0% | |
ATGTAGAATCATGTAGAACT+AGG | + | chr5_3:65430639-65430658 | None:intergenic | 30.0% | |
!!! | AGTTTTGAAAAAAAGGTCTG+CGG | + | chr5_3:65430742-65430761 | None:intergenic | 30.0% |
!!! | CTCTTAAAGGTGGAATTTTT+TGG | + | chr5_3:65431051-65431070 | None:intergenic | 30.0% |
! | AAAAATTCCACCTTTAAGAG+AGG | - | chr5_3:65431051-65431070 | Msa0825540:intron | 30.0% |
!!! | ATACGGTTTCTGTTACTTTT+TGG | - | chr5_3:65431076-65431095 | Msa0825540:intron | 30.0% |
ATAGTAAAGCCACAATAGAA+TGG | - | chr5_3:65431247-65431266 | Msa0825540:intron | 30.0% | |
!! | TGTTTTATTCTGTATACACC+AGG | + | chr5_3:65431294-65431313 | None:intergenic | 30.0% |
! | CTAGAGAAAGTGATGATGAA+AGG | + | chr5_3:65425050-65425069 | None:intergenic | 35.0% |
TGAGATGAACTAGCTAAACT+TGG | - | chr5_3:65425450-65425469 | Msa0825540:CDS | 35.0% | |
! | GAAATTTCTGAGGACCAAAT+TGG | - | chr5_3:65425759-65425778 | Msa0825540:intron | 35.0% |
! | AATTTCTGAGGACCAAATTG+GGG | - | chr5_3:65425761-65425780 | Msa0825540:intron | 35.0% |
!! | CTTGGAAAATTGGTCTTTCT+TGG | - | chr5_3:65425867-65425886 | Msa0825540:intron | 35.0% |
! | CATTCAAGTTAGAGAGTGAA+GGG | + | chr5_3:65425929-65425948 | None:intergenic | 35.0% |
! | ACATTCAAGTTAGAGAGTGA+AGG | + | chr5_3:65425930-65425949 | None:intergenic | 35.0% |
CACTCTCTAACTTGAATGTT+TGG | - | chr5_3:65425931-65425950 | Msa0825540:intron | 35.0% | |
TCTCTAACTTGAATGTTTGG+AGG | - | chr5_3:65425934-65425953 | Msa0825540:intron | 35.0% | |
CTCTAACTTGAATGTTTGGA+GGG | - | chr5_3:65425935-65425954 | Msa0825540:intron | 35.0% | |
TTTCTGCAACTATGACAGTT+TGG | - | chr5_3:65425958-65425977 | Msa0825540:intron | 35.0% | |
!! | TGTAACTACTTGATTGGTCT+TGG | - | chr5_3:65426029-65426048 | Msa0825540:intron | 35.0% |
TGTTAATCTCGATGCTTGTA+TGG | - | chr5_3:65426193-65426212 | Msa0825540:CDS | 35.0% | |
GTTAATCTCGATGCTTGTAT+GGG | - | chr5_3:65426194-65426213 | Msa0825540:CDS | 35.0% | |
! | CATGGAATCCTATTCTGAAA+AGG | + | chr5_3:65426429-65426448 | None:intergenic | 35.0% |
CTTCATCAAACGACTAAGAT+AGG | + | chr5_3:65426466-65426485 | None:intergenic | 35.0% | |
GTCGTTTGATGAAGATTAGA+CGG | - | chr5_3:65426472-65426491 | Msa0825540:intron | 35.0% | |
TCACGAAATCAGCTGTAATT+TGG | + | chr5_3:65426506-65426525 | None:intergenic | 35.0% | |
GTTGTTGGATGAAAATCAGA+TGG | + | chr5_3:65426542-65426561 | None:intergenic | 35.0% | |
! | TATCTTGATGCAGCGAATTT+TGG | - | chr5_3:65426598-65426617 | Msa0825540:intron | 35.0% |
! | CAATAATGGGATTCAGGAAA+AGG | + | chr5_3:65426629-65426648 | None:intergenic | 35.0% |
TTTCCTGAATCCCATTATTG+TGG | - | chr5_3:65426629-65426648 | Msa0825540:intron | 35.0% | |
TTCCTGAATCCCATTATTGT+GGG | - | chr5_3:65426630-65426649 | Msa0825540:intron | 35.0% | |
TACAGAACTCCCACAATAAT+GGG | + | chr5_3:65426642-65426661 | None:intergenic | 35.0% | |
ATGTCAGGACTGTAAAAACA+GGG | + | chr5_3:65426677-65426696 | None:intergenic | 35.0% | |
AATGTCAGGACTGTAAAAAC+AGG | + | chr5_3:65426678-65426697 | None:intergenic | 35.0% | |
TTTCTCAATGCCATCAACAA+GGG | + | chr5_3:65426853-65426872 | None:intergenic | 35.0% | |
! | TTTTCTCAATGCCATCAACA+AGG | + | chr5_3:65426854-65426873 | None:intergenic | 35.0% |
!! | CATTGAGAAAAGCATTGTTC+AGG | - | chr5_3:65426863-65426882 | Msa0825540:intron | 35.0% |
!! | AGCATTTGTTTTCTTCCCTT+AGG | - | chr5_3:65426942-65426961 | Msa0825540:intron | 35.0% |
GGGAACATCAATTTCTTATC+TGG | + | chr5_3:65427188-65427207 | None:intergenic | 35.0% | |
! | CACTTAACCCTTTTGATGAA+AGG | - | chr5_3:65427221-65427240 | Msa0825540:intron | 35.0% |
AGACACACCTTTCATCAAAA+GGG | + | chr5_3:65427231-65427250 | None:intergenic | 35.0% | |
ATTTCTATGATACAAGCAGG+GGG | + | chr5_3:65427359-65427378 | None:intergenic | 35.0% | |
AGAAAATGAGTGTTACGAGA+TGG | - | chr5_3:65427410-65427429 | Msa0825540:intron | 35.0% | |
ACCATGAAATATCACCAAAG+GGG | + | chr5_3:65427448-65427467 | None:intergenic | 35.0% | |
CAACCATGAAATATCACCAA+AGG | + | chr5_3:65427450-65427469 | None:intergenic | 35.0% | |
GCGAAAAAGTTCTGTAAGAA+AGG | - | chr5_3:65427745-65427764 | Msa0825540:intron | 35.0% | |
TCTGTAAGAAAGGATTCTGT+TGG | - | chr5_3:65427755-65427774 | Msa0825540:intron | 35.0% | |
TCTGTTGGATTTGAAGATGA+TGG | - | chr5_3:65427770-65427789 | Msa0825540:intron | 35.0% | |
!! | TATCCGTTGATTTGTTCACA+CGG | + | chr5_3:65427929-65427948 | None:intergenic | 35.0% |
AAAAAGAATCGGTGTGTGAT+TGG | + | chr5_3:65428017-65428036 | None:intergenic | 35.0% | |
!!! | ATCACACACCGATTCTTTTT+TGG | - | chr5_3:65428017-65428036 | Msa0825540:CDS | 35.0% |
!!! | TCACACACCGATTCTTTTTT+GGG | - | chr5_3:65428018-65428037 | Msa0825540:CDS | 35.0% |
TCTATCTGTCTTTGTTGCAT+TGG | - | chr5_3:65428142-65428161 | Msa0825540:intron | 35.0% | |
! | GCACTAATTTTGTTCTTTGG+TGG | - | chr5_3:65428181-65428200 | Msa0825540:intron | 35.0% |
TCCTCTTAAAGTCTCAATGT+AGG | - | chr5_3:65428272-65428291 | Msa0825540:intron | 35.0% | |
TGGTACAGATCATGAATTAC+TGG | - | chr5_3:65428451-65428470 | Msa0825540:intron | 35.0% | |
! | TCTAGCAACACTTGAAGTTT+TGG | + | chr5_3:65428519-65428538 | None:intergenic | 35.0% |
!! | AGGTTTGTTAACCTGTCTAA+GGG | + | chr5_3:65428555-65428574 | None:intergenic | 35.0% |
!! | TAGGTTTGTTAACCTGTCTA+AGG | + | chr5_3:65428556-65428575 | None:intergenic | 35.0% |
TAATCCAGTGTCTGTACAAA+AGG | + | chr5_3:65428639-65428658 | None:intergenic | 35.0% | |
CGTGTACTTTCAAATTCATC+TGG | + | chr5_3:65428831-65428850 | None:intergenic | 35.0% | |
GAGACAGTTTAAAAAAGCAG+TGG | - | chr5_3:65428863-65428882 | Msa0825540:CDS | 35.0% | |
GAGCTTGGAAAAATTTAGGA+AGG | + | chr5_3:65428943-65428962 | None:intergenic | 35.0% | |
TGCTTAAAATCAAATGCTCC+GGG | + | chr5_3:65429059-65429078 | None:intergenic | 35.0% | |
!! | GGAGCATTTGATTTTAAGCA+AGG | - | chr5_3:65429059-65429078 | Msa0825540:intron | 35.0% |
! | TTTTAAGCAAGGTGATGATC+AGG | - | chr5_3:65429070-65429089 | Msa0825540:intron | 35.0% |
!! | TAGGATAATGGGTAAGCATA+TGG | + | chr5_3:65429113-65429132 | None:intergenic | 35.0% |
! | CAGGCGTTTTCAGTAAATTA+CGG | + | chr5_3:65429201-65429220 | None:intergenic | 35.0% |
GTATCAAGCAAAATAGGCTT+TGG | + | chr5_3:65429250-65429269 | None:intergenic | 35.0% | |
! | AAGCCTATTTTGCTTGATAC+TGG | - | chr5_3:65429250-65429269 | Msa0825540:intron | 35.0% |
TCACCAGTATCAAGCAAAAT+AGG | + | chr5_3:65429256-65429275 | None:intergenic | 35.0% | |
TAACTTACAGCCCAATCATA+TGG | + | chr5_3:65429289-65429308 | None:intergenic | 35.0% | |
AGGGAAGATTAATGGTATAG+AGG | - | chr5_3:65429389-65429408 | Msa0825540:intron | 35.0% | |
!!! | GTATAGAGGCTGTTTTTAAG+AGG | - | chr5_3:65429403-65429422 | Msa0825540:intron | 35.0% |
TTTATTCTTAGTGTACCAGG+AGG | - | chr5_3:65429748-65429767 | Msa0825540:CDS | 35.0% | |
AAATTAAGAACCATACCTCC+TGG | + | chr5_3:65429766-65429785 | None:intergenic | 35.0% | |
! | ACAAGACATTTGGAGTACAT+TGG | + | chr5_3:65430079-65430098 | None:intergenic | 35.0% |
AAGCACCCAAAGAAATACAT+AGG | + | chr5_3:65430209-65430228 | None:intergenic | 35.0% | |
TCTGACAGAATTCACAACAA+TGG | - | chr5_3:65430253-65430272 | Msa0825540:intron | 35.0% | |
!! | GAAGGTCTGTCATTTCTTTT+AGG | + | chr5_3:65430576-65430595 | None:intergenic | 35.0% |
AAGTACTCTATATGCTAGGA+AGG | + | chr5_3:65430594-65430613 | None:intergenic | 35.0% | |
AAAATGTACCTTCGGTCATA+AGG | + | chr5_3:65431122-65431141 | None:intergenic | 35.0% | |
AAATCATCATCGTCATAAGC+AGG | + | chr5_3:65431183-65431202 | None:intergenic | 35.0% | |
! | ATTTTTGTGTGCGCTTCAAA+TGG | - | chr5_3:65431199-65431218 | Msa0825540:intron | 35.0% |
!! | CTATGAGTACTGAGTTTGAA+AGG | + | chr5_3:65431231-65431250 | None:intergenic | 35.0% |
TGGTATTCTCCATTCTATTG+TGG | + | chr5_3:65431259-65431278 | None:intergenic | 35.0% | |
AATAGAATGGAGAATACCAC+AGG | - | chr5_3:65431260-65431279 | Msa0825540:intron | 35.0% | |
!!! | AAAACATTTTGGAGCTGCAA+AGG | - | chr5_3:65431308-65431327 | Msa0825540:intron | 35.0% |
!!! | AAACATTTTGGAGCTGCAAA+GGG | - | chr5_3:65431309-65431328 | Msa0825540:intron | 35.0% |
CATTTGTAGTAGCACACTAA+AGG | - | chr5_3:65431373-65431392 | Msa0825540:five_prime_UTR | 35.0% | |
GATTCATTCTACACGTTCAA+TGG | - | chr5_3:65431410-65431429 | Msa0825540:five_prime_UTR | 35.0% | |
! | TTAAATCTTTTTGTGGGCCT+TGG | - | chr5_3:65431598-65431617 | Msa0825540:five_prime_UTR | 35.0% |
! | AGTGATGATGAAAGGGAAAG+AGG | + | chr5_3:65425042-65425061 | None:intergenic | 40.0% |
ATCACAACTTTACATCTGGG+TGG | - | chr5_3:65425168-65425187 | Msa0825540:CDS | 40.0% | |
GCAGAGAATTCTAATTTGGG+AGG | + | chr5_3:65425303-65425322 | None:intergenic | 40.0% | |
CGTAATACCCAAATTAGTCG+CGG | - | chr5_3:65425635-65425654 | Msa0825540:CDS | 40.0% | |
TCAATGTCCGCGACTAATTT+GGG | + | chr5_3:65425645-65425664 | None:intergenic | 40.0% | |
TGAAGGGAAATGAGAAGAAC+CGG | - | chr5_3:65425839-65425858 | Msa0825540:intron | 40.0% | |
! | ACCAATTTTCCAAGCTTAGC+CGG | + | chr5_3:65425861-65425880 | None:intergenic | 40.0% |
CTTGGAAGCTATGACATTAC+CGG | - | chr5_3:65426047-65426066 | Msa0825540:intron | 40.0% | |
ATCATGTTAACATCAGCTGC+AGG | + | chr5_3:65426074-65426093 | None:intergenic | 40.0% | |
TGCAGCTGATGTTAACATGA+TGG | - | chr5_3:65426073-65426092 | Msa0825540:intron | 40.0% | |
GCAGCTGATGTTAACATGAT+GGG | - | chr5_3:65426074-65426093 | Msa0825540:intron | 40.0% | |
! | TTTTATTGTTGCCGAGCCTA+AGG | - | chr5_3:65426154-65426173 | Msa0825540:CDS | 40.0% |
TTTATTGTTGCCGAGCCTAA+GGG | - | chr5_3:65426155-65426174 | Msa0825540:CDS | 40.0% | |
! | AACACTAGCCTATTACCCTT+AGG | + | chr5_3:65426173-65426192 | None:intergenic | 40.0% |
TACTTGAGAGGCTTAAAGCA+AGG | - | chr5_3:65426240-65426259 | Msa0825540:CDS | 40.0% | |
TAGGCAATTGCGTGAATACA+TGG | + | chr5_3:65426447-65426466 | None:intergenic | 40.0% | |
AATGGGATTCAGGAAAAGGT+TGG | + | chr5_3:65426625-65426644 | None:intergenic | 40.0% | |
CTACAGAACTCCCACAATAA+TGG | + | chr5_3:65426643-65426662 | None:intergenic | 40.0% | |
TGTCAGGACTGTAAAAACAG+GGG | + | chr5_3:65426676-65426695 | None:intergenic | 40.0% | |
TCATTTGATGCCCTTGTTGA+TGG | - | chr5_3:65426840-65426859 | Msa0825540:intron | 40.0% | |
TGACAAATATTGATCCTGGG+CGG | + | chr5_3:65426902-65426921 | None:intergenic | 40.0% | |
!!! | TCTGGTTTTAGTCAAGACTG+TGG | + | chr5_3:65427170-65427189 | None:intergenic | 40.0% |
AAAAGGGTTAAGTGCTACAG+AGG | + | chr5_3:65427215-65427234 | None:intergenic | 40.0% | |
CAGACACACCTTTCATCAAA+AGG | + | chr5_3:65427232-65427251 | None:intergenic | 40.0% | |
!! | CTTTTGATGAAAGGTGTGTC+TGG | - | chr5_3:65427230-65427249 | Msa0825540:intron | 40.0% |
TTTCTATGATACAAGCAGGG+GGG | + | chr5_3:65427358-65427377 | None:intergenic | 40.0% | |
CATGAAATATCACCAAAGGG+GGG | + | chr5_3:65427446-65427465 | None:intergenic | 40.0% | |
CCATGAAATATCACCAAAGG+GGG | + | chr5_3:65427447-65427466 | None:intergenic | 40.0% | |
!! | TTCAACTGGTTTGCTACTCA+TGG | - | chr5_3:65427641-65427660 | Msa0825540:CDS | 40.0% |
TTGCCGTGTGAACAAATCAA+CGG | - | chr5_3:65427923-65427942 | Msa0825540:CDS | 40.0% | |
!!! | CACACACCGATTCTTTTTTG+GGG | - | chr5_3:65428019-65428038 | Msa0825540:CDS | 40.0% |
GTTACACAACTTCACAGTTC+TGG | - | chr5_3:65428225-65428244 | Msa0825540:intron | 40.0% | |
GCCTACATTGAGACTTTAAG+AGG | + | chr5_3:65428276-65428295 | None:intergenic | 40.0% | |
! | TCAATGTAGGCTGACTTCAA+TGG | - | chr5_3:65428285-65428304 | Msa0825540:intron | 40.0% |
! | GCTGACTTCAATGGAATTGT+CGG | - | chr5_3:65428294-65428313 | Msa0825540:intron | 40.0% |
GATGTTAGTCCGAATGTACT+TGG | - | chr5_3:65428611-65428630 | Msa0825540:intron | 40.0% | |
CAAAAGGCTCCAAGTACATT+CGG | + | chr5_3:65428623-65428642 | None:intergenic | 40.0% | |
ACTTCAATCACAGCACATGT+GGG | - | chr5_3:65428666-65428685 | Msa0825540:intron | 40.0% | |
GGGAAGAATGAGTTATGCTA+TGG | - | chr5_3:65428689-65428708 | Msa0825540:intron | 40.0% | |
AGAATGAGTTATGCTATGGC+CGG | - | chr5_3:65428693-65428712 | Msa0825540:intron | 40.0% | |
TAAATAATTACCCAGGTCCC+CGG | + | chr5_3:65428715-65428734 | None:intergenic | 40.0% | |
AAAGCAGTGGAGCTATTCAA+TGG | - | chr5_3:65428876-65428895 | Msa0825540:CDS | 40.0% | |
! | GGAGCATCTGAACAGATTAA+AGG | - | chr5_3:65428897-65428916 | Msa0825540:CDS | 40.0% |
CCTCGAGCTTGGAAAAATTT+AGG | + | chr5_3:65428947-65428966 | None:intergenic | 40.0% | |
! | CCTAAATTTTTCCAAGCTCG+AGG | - | chr5_3:65428944-65428963 | Msa0825540:CDS | 40.0% |
AGAAACATTTACCTCGAGCT+TGG | + | chr5_3:65428958-65428977 | None:intergenic | 40.0% | |
!! | GAGGTAAATGTTTCTAGCAG+TGG | - | chr5_3:65428963-65428982 | Msa0825540:CDS | 40.0% |
TTTACTGAAAACGCCTGACA+AGG | - | chr5_3:65429204-65429223 | Msa0825540:intron | 40.0% | |
CCATATAACTAATCTGAGCC+TGG | + | chr5_3:65429350-65429369 | None:intergenic | 40.0% | |
! | CCAGGCTCAGATTAGTTATA+TGG | - | chr5_3:65429347-65429366 | Msa0825540:intron | 40.0% |
ATTGCATGACCTGATCTTCT+TGG | - | chr5_3:65429482-65429501 | Msa0825540:intron | 40.0% | |
CAATCCAAATCCTCCGAATT+GGG | - | chr5_3:65429719-65429738 | Msa0825540:CDS | 40.0% | |
TAAAAAACTGCCCAATTCGG+AGG | + | chr5_3:65429732-65429751 | None:intergenic | 40.0% | |
ACAGACTACTCATTAGACCA+AGG | + | chr5_3:65429858-65429877 | None:intergenic | 40.0% | |
TGAATTGCACAAAGTAGTGC+TGG | + | chr5_3:65429987-65430006 | None:intergenic | 40.0% | |
ACATAGGTGATAGGACAACT+TGG | + | chr5_3:65430193-65430212 | None:intergenic | 40.0% | |
ACAGAATTCACAACAATGGC+TGG | - | chr5_3:65430257-65430276 | Msa0825540:intron | 40.0% | |
CAGAATTCACAACAATGGCT+GGG | - | chr5_3:65430258-65430277 | Msa0825540:intron | 40.0% | |
! | GAGGTCAGTTGTAACTTTTG+TGG | - | chr5_3:65430422-65430441 | Msa0825540:CDS | 40.0% |
! | TTTGTATTGGCACACAGAGA+TGG | - | chr5_3:65430547-65430566 | Msa0825540:CDS | 40.0% |
ATGTATGCACTCAATGTGTG+TGG | + | chr5_3:65430865-65430884 | None:intergenic | 40.0% | |
CACATTGAGTGCATACATTC+AGG | - | chr5_3:65430867-65430886 | Msa0825540:intron | 40.0% | |
CTTACTAACACCAGTAGTGA+TGG | - | chr5_3:65430978-65430997 | Msa0825540:intron | 40.0% | |
! | CACCTTTAAGAGAGGTGATA+CGG | - | chr5_3:65431059-65431078 | Msa0825540:intron | 40.0% |
AACCGTATCACCTCTCTTAA+AGG | + | chr5_3:65431064-65431083 | None:intergenic | 40.0% | |
CACCAGAGAAAATGTACCTT+CGG | + | chr5_3:65431130-65431149 | None:intergenic | 40.0% | |
GAGCTGCAAAGGGTTTATTA+GGG | - | chr5_3:65431319-65431338 | Msa0825540:intron | 40.0% | |
TGTAGTAGCACACTAAAGGA+AGG | - | chr5_3:65431377-65431396 | Msa0825540:five_prime_UTR | 40.0% | |
GTAGTAGCACACTAAAGGAA+GGG | - | chr5_3:65431378-65431397 | Msa0825540:five_prime_UTR | 40.0% | |
TCTGGATAACAAAGGACATG+TGG | + | chr5_3:65431526-65431545 | None:intergenic | 40.0% | |
AAGACAGACAGACAGAGTTG+TGG | + | chr5_3:65424999-65425018 | None:intergenic | 45.0% | |
TGATGAAAGGGAAAGAGGAG+TGG | + | chr5_3:65425037-65425056 | None:intergenic | 45.0% | |
! | ATGGGAACTGGGAAGTTTTG+TGG | - | chr5_3:65425407-65425426 | Msa0825540:CDS | 45.0% |
!! | TGGGAACTGGGAAGTTTTGT+GGG | - | chr5_3:65425408-65425427 | Msa0825540:CDS | 45.0% |
GTCAATGTCCGCGACTAATT+TGG | + | chr5_3:65425646-65425665 | None:intergenic | 45.0% | |
TGAGCAGCGAGAAATTTCTG+AGG | - | chr5_3:65425749-65425768 | Msa0825540:intron | 45.0% | |
ACCGGCTAAGCTTGGAAAAT+TGG | - | chr5_3:65425857-65425876 | Msa0825540:intron | 45.0% | |
AACACAGAGCAGATTGCATC+TGG | - | chr5_3:65426104-65426123 | Msa0825540:intron | 45.0% | |
ACACAGAGCAGATTGCATCT+GGG | - | chr5_3:65426105-65426124 | Msa0825540:intron | 45.0% | |
! | TTGCATCTGGGGTTCACTTT+AGG | - | chr5_3:65426117-65426136 | Msa0825540:intron | 45.0% |
TAGCCTATTACCCTTAGGCT+CGG | + | chr5_3:65426168-65426187 | None:intergenic | 45.0% | |
TCATGAAGTCAAGCTCACGT+AGG | + | chr5_3:65426577-65426596 | None:intergenic | 45.0% | |
! | CTCCCACAATAATGGGATTC+AGG | + | chr5_3:65426635-65426654 | None:intergenic | 45.0% |
!! | CAACAAGGGCATCAAATGAC+TGG | + | chr5_3:65426839-65426858 | None:intergenic | 45.0% |
GGTTAAATTTCTCCCCCCTT+TGG | - | chr5_3:65427431-65427450 | Msa0825540:intron | 45.0% | |
! | CCCCCTTTGGTGATATTTCA+TGG | - | chr5_3:65427444-65427463 | Msa0825540:intron | 45.0% |
TATTTGCTTCTCTCTGCAGC+CGG | + | chr5_3:65427551-65427570 | None:intergenic | 45.0% | |
! | TGATGATGAATGGGGTCCTT+CGG | - | chr5_3:65427613-65427632 | Msa0825540:CDS | 45.0% |
CTGCACGATTTATGGAAGAC+TGG | - | chr5_3:65427717-65427736 | Msa0825540:intron | 45.0% | |
!!! | TTTTGGGGTGATAAGCAGTG+TGG | - | chr5_3:65428034-65428053 | Msa0825540:CDS | 45.0% |
!! | ACACTTGAAGTTTTGGTCGC+TGG | + | chr5_3:65428512-65428531 | None:intergenic | 45.0% |
! | AGTGTTGCTAGACGTGTAAG+AGG | - | chr5_3:65428527-65428546 | Msa0825540:intron | 45.0% |
GTGCTGTGATTGAAGTCACA+AGG | + | chr5_3:65428662-65428681 | None:intergenic | 45.0% | |
GACTTCAATCACAGCACATG+TGG | - | chr5_3:65428665-65428684 | Msa0825540:intron | 45.0% | |
CTTCAATCACAGCACATGTG+GGG | - | chr5_3:65428667-65428686 | Msa0825540:intron | 45.0% | |
TTCAATCACAGCACATGTGG+GGG | - | chr5_3:65428668-65428687 | Msa0825540:intron | 45.0% | |
GAATGAGTTATGCTATGGCC+GGG | - | chr5_3:65428694-65428713 | Msa0825540:intron | 45.0% | |
AATGAGTTATGCTATGGCCG+GGG | - | chr5_3:65428695-65428714 | Msa0825540:intron | 45.0% | |
TTCTAGCAGTGGAGCTTCTA+AGG | - | chr5_3:65428974-65428993 | Msa0825540:CDS | 45.0% | |
ATCCAAATCCCATTGCAGCA+GGG | + | chr5_3:65429013-65429032 | None:intergenic | 45.0% | |
AATCCAAATCCCATTGCAGC+AGG | + | chr5_3:65429014-65429033 | None:intergenic | 45.0% | |
!! | ATGGGATTTGGATTTGCTGC+TGG | - | chr5_3:65429020-65429039 | Msa0825540:CDS | 45.0% |
TTTGCTGCTGGAACAACTGA+TGG | - | chr5_3:65429032-65429051 | Msa0825540:CDS | 45.0% | |
TACGGACCAGTTTCCAGAAA+GGG | + | chr5_3:65429183-65429202 | None:intergenic | 45.0% | |
TTACGGACCAGTTTCCAGAA+AGG | + | chr5_3:65429184-65429203 | None:intergenic | 45.0% | |
CAGGCTATTTGTTCCTTGTC+AGG | + | chr5_3:65429220-65429239 | None:intergenic | 45.0% | |
TGTCTTATAGTCTCCACTCC+AGG | - | chr5_3:65429329-65429348 | Msa0825540:intron | 45.0% | |
TAACTAATCTGAGCCTGGAG+TGG | + | chr5_3:65429345-65429364 | None:intergenic | 45.0% | |
! | TGGAAGTATAGTAGGCTGCA+AGG | + | chr5_3:65429701-65429720 | None:intergenic | 45.0% |
CCAATTCGGAGGATTTGGAT+TGG | + | chr5_3:65429721-65429740 | None:intergenic | 45.0% | |
CCAATCCAAATCCTCCGAAT+TGG | - | chr5_3:65429718-65429737 | Msa0825540:CDS | 45.0% | |
TCTTAGTGTACCAGGAGGTA+TGG | - | chr5_3:65429753-65429772 | Msa0825540:CDS | 45.0% | |
! | GTTTCAAGTGTCAACGACCT+TGG | - | chr5_3:65429838-65429857 | Msa0825540:intron | 45.0% |
AATTCACAACAATGGCTGGG+AGG | - | chr5_3:65430261-65430280 | Msa0825540:intron | 45.0% | |
ACAGTATGTGACCACATACG+AGG | - | chr5_3:65430379-65430398 | Msa0825540:CDS | 45.0% | |
GTACGAGGTGCAAAGATATG+AGG | - | chr5_3:65430403-65430422 | Msa0825540:CDS | 45.0% | |
TGCTGCCCATGAAGCAATAT+TGG | - | chr5_3:65430664-65430683 | Msa0825540:five_prime_UTR | 45.0% | |
GCTGCCCATGAAGCAATATT+GGG | - | chr5_3:65430665-65430684 | Msa0825540:five_prime_UTR | 45.0% | |
GCCTCCCAATATTGCTTCAT+GGG | + | chr5_3:65430672-65430691 | None:intergenic | 45.0% | |
TGCCTCCCAATATTGCTTCA+TGG | + | chr5_3:65430673-65430692 | None:intergenic | 45.0% | |
! | TAGGGTGCTTCCACACTTTA+TGG | - | chr5_3:65430838-65430857 | Msa0825540:intron | 45.0% |
TGTGTGTGGACCATAAAGTG+TGG | + | chr5_3:65430851-65430870 | None:intergenic | 45.0% | |
GTAAGCCTATTTGCTTGTCC+AGG | + | chr5_3:65430963-65430982 | None:intergenic | 45.0% | |
! | CTAACACCAGTAGTGATGGA+TGG | - | chr5_3:65430982-65431001 | Msa0825540:intron | 45.0% |
CGTATCACCTCTCTTAAAGG+TGG | + | chr5_3:65431061-65431080 | None:intergenic | 45.0% | |
CGGTCATAAGGTCATTTCGA+GGG | + | chr5_3:65431110-65431129 | None:intergenic | 45.0% | |
TCGGTCATAAGGTCATTTCG+AGG | + | chr5_3:65431111-65431130 | None:intergenic | 45.0% | |
CGAAATGACCTTATGACCGA+AGG | - | chr5_3:65431111-65431130 | Msa0825540:intron | 45.0% | |
!! | GACCGAAGGTACATTTTCTC+TGG | - | chr5_3:65431125-65431144 | Msa0825540:intron | 45.0% |
!! | CGAAGGTACATTTTCTCTGG+TGG | - | chr5_3:65431128-65431147 | Msa0825540:intron | 45.0% |
TCTCTGGTGGAATATCTCCA+AGG | - | chr5_3:65431141-65431160 | Msa0825540:intron | 45.0% | |
CTCTGGTGGAATATCTCCAA+GGG | - | chr5_3:65431142-65431161 | Msa0825540:intron | 45.0% | |
ATCTCCAAGGGAAGGATACT+TGG | - | chr5_3:65431154-65431173 | Msa0825540:intron | 45.0% | |
TCTCCAAGGGAAGGATACTT+GGG | - | chr5_3:65431155-65431174 | Msa0825540:intron | 45.0% | |
GGAGCTGCAAAGGGTTTATT+AGG | - | chr5_3:65431318-65431337 | Msa0825540:intron | 45.0% | |
! | GGGTCAATTCGTCACTTTAC+AGG | - | chr5_3:65431339-65431358 | Msa0825540:intron | 45.0% |
!! | GTTATTATTAATATATAATT+TGG | - | chr5_3:65431444-65431463 | Msa0825540:five_prime_UTR | 5.0% |
TGAAAGGGAAAGAGGAGTGG+AGG | + | chr5_3:65425034-65425053 | None:intergenic | 50.0% | |
CCAAAGCTTGCAGCAAGTGT+GGG | + | chr5_3:65425116-65425135 | None:intergenic | 50.0% | |
ACCAAAGCTTGCAGCAAGTG+TGG | + | chr5_3:65425117-65425136 | None:intergenic | 50.0% | |
TGAGAAGAACCGGCTAAGCT+TGG | - | chr5_3:65425849-65425868 | Msa0825540:intron | 50.0% | |
GTTAACATCAGCTGCAGGAC+CGG | + | chr5_3:65426069-65426088 | None:intergenic | 50.0% | |
CACAGAGCAGATTGCATCTG+GGG | - | chr5_3:65426106-65426125 | Msa0825540:intron | 50.0% | |
!! | CTGGGGTTCACTTTAGGTTG+CGG | - | chr5_3:65426123-65426142 | Msa0825540:intron | 50.0% |
TTGCCGAGCCTAAGGGTAAT+AGG | - | chr5_3:65426162-65426181 | Msa0825540:CDS | 50.0% | |
! | AGGCATGGGATAACGGTTGT+TGG | + | chr5_3:65426557-65426576 | None:intergenic | 50.0% |
CTCACGTAGGCATGGGATAA+CGG | + | chr5_3:65426564-65426583 | None:intergenic | 50.0% | |
AGTCAAGCTCACGTAGGCAT+GGG | + | chr5_3:65426571-65426590 | None:intergenic | 50.0% | |
AAGTCAAGCTCACGTAGGCA+TGG | + | chr5_3:65426572-65426591 | None:intergenic | 50.0% | |
AGTGGAATTCACACCCATGC+TGG | - | chr5_3:65426756-65426775 | Msa0825540:intron | 50.0% | |
ACATACTGAAGATACCCCCC+AGG | + | chr5_3:65426783-65426802 | None:intergenic | 50.0% | |
TTAAGTGCTACAGAGGTCGG+GGG | + | chr5_3:65427208-65427227 | None:intergenic | 50.0% | |
GTTAAGTGCTACAGAGGTCG+GGG | + | chr5_3:65427209-65427228 | None:intergenic | 50.0% | |
GGTTAAGTGCTACAGAGGTC+GGG | + | chr5_3:65427210-65427229 | None:intergenic | 50.0% | |
GGGTTAAGTGCTACAGAGGT+CGG | + | chr5_3:65427211-65427230 | None:intergenic | 50.0% | |
!! | TGTCGGTGTCGTATTGGTCT+TGG | + | chr5_3:65427259-65427278 | None:intergenic | 50.0% |
!! | GACATGTGTCGGTGTCGTAT+TGG | + | chr5_3:65427265-65427284 | None:intergenic | 50.0% |
!! | AGTATCGGCGTGTTAGTGTC+TGG | - | chr5_3:65427304-65427323 | Msa0825540:CDS | 50.0% |
! | GCAGGAGAGCTTTTAGATGC+TGG | - | chr5_3:65427491-65427510 | Msa0825540:CDS | 50.0% |
GGATTGTTGAGGTAAGCGCT+GGG | + | chr5_3:65427530-65427549 | None:intergenic | 50.0% | |
CAGCGCTTACCTCAACAATC+CGG | - | chr5_3:65427529-65427548 | Msa0825540:CDS | 50.0% | |
GATGATGAATGGGGTCCTTC+GGG | - | chr5_3:65427614-65427633 | Msa0825540:CDS | 50.0% | |
AACCAGTTGAAGCTTCCCGA+AGG | + | chr5_3:65427632-65427651 | None:intergenic | 50.0% | |
! | CAACTTCACAGTTCTGGCGT+TGG | - | chr5_3:65428231-65428250 | Msa0825540:intron | 50.0% |
GCATCATTCCAATCTCCTCC+CGG | - | chr5_3:65428482-65428501 | Msa0825540:intron | 50.0% | |
!! | AGTTTTGGTCGCTGGTCTAC+CGG | + | chr5_3:65428504-65428523 | None:intergenic | 50.0% |
!! | TGTAAGAGGTGCCCTTAGAC+AGG | - | chr5_3:65428541-65428560 | Msa0825540:intron | 50.0% |
! | GGAGCCTTTTGTACAGACAC+TGG | - | chr5_3:65428632-65428651 | Msa0825540:intron | 50.0% |
TCAATCACAGCACATGTGGG+GGG | - | chr5_3:65428669-65428688 | Msa0825540:intron | 50.0% | |
AAAGACATGCCCTGCTGCAA+TGG | - | chr5_3:65429001-65429020 | Msa0825540:CDS | 50.0% | |
AAGACATGCCCTGCTGCAAT+GGG | - | chr5_3:65429002-65429021 | Msa0825540:CDS | 50.0% | |
TGTATCAGGGGAACCCTTTC+TGG | - | chr5_3:65429167-65429186 | Msa0825540:intron | 50.0% | |
! | AATAGGCTTTGGCTGCTGAC+AGG | + | chr5_3:65429239-65429258 | None:intergenic | 50.0% |
GTGGACAAGCCAAGAAGATC+AGG | + | chr5_3:65429494-65429513 | None:intergenic | 50.0% | |
ACTGCCCAATTCGGAGGATT+TGG | + | chr5_3:65429726-65429745 | None:intergenic | 50.0% | |
GCAGTGAAGACAGTGCTAAG+CGG | - | chr5_3:65430296-65430315 | Msa0825540:CDS | 50.0% | |
CAGTGAAGACAGTGCTAAGC+GGG | - | chr5_3:65430297-65430316 | Msa0825540:CDS | 50.0% | |
AGTGAAGACAGTGCTAAGCG+GGG | - | chr5_3:65430298-65430317 | Msa0825540:CDS | 50.0% | |
CTAAGCGGGGACAAAAGCTT+AGG | - | chr5_3:65430311-65430330 | Msa0825540:CDS | 50.0% | |
ATTGCTTCATGGGCAGCACA+AGG | + | chr5_3:65430662-65430681 | None:intergenic | 50.0% | |
GCCCATGAAGCAATATTGGG+AGG | - | chr5_3:65430668-65430687 | Msa0825540:five_prime_UTR | 50.0% | |
CTTGCACACGCTCTCATCAA+CGG | - | chr5_3:65430901-65430920 | Msa0825540:intron | 50.0% | |
ATTTGCTTGTCCAGGAGGTC+TGG | + | chr5_3:65430955-65430974 | None:intergenic | 50.0% | |
GACCTCCTGGACAAGCAAAT+AGG | - | chr5_3:65430955-65430974 | Msa0825540:intron | 50.0% | |
AGCCTATTTGCTTGTCCAGG+AGG | + | chr5_3:65430960-65430979 | None:intergenic | 50.0% | |
!! | ACCCCTCTTGGTGCAAGTTT+TGG | - | chr5_3:65431006-65431025 | Msa0825540:intron | 50.0% |
CCCAAAACTTGCACCAAGAG+GGG | + | chr5_3:65431010-65431029 | None:intergenic | 50.0% | |
!! | CCCCTCTTGGTGCAAGTTTT+GGG | - | chr5_3:65431007-65431026 | Msa0825540:intron | 50.0% |
CCCCAAAACTTGCACCAAGA+GGG | + | chr5_3:65431011-65431030 | None:intergenic | 50.0% | |
!! | CCCTCTTGGTGCAAGTTTTG+GGG | - | chr5_3:65431008-65431027 | Msa0825540:intron | 50.0% |
TCCCCAAAACTTGCACCAAG+AGG | + | chr5_3:65431012-65431031 | None:intergenic | 50.0% | |
GGTGGAATATCTCCAAGGGA+AGG | - | chr5_3:65431146-65431165 | Msa0825540:intron | 50.0% | |
GAACCCAAGTATCCTTCCCT+TGG | + | chr5_3:65431161-65431180 | None:intergenic | 50.0% | |
GTGTGCGCTTCAAATGGTCA+AGG | - | chr5_3:65431205-65431224 | Msa0825540:intron | 50.0% | |
ATACCACAGGATGTAGCTCC+TGG | - | chr5_3:65431273-65431292 | Msa0825540:intron | 50.0% | |
GGAAAGAGGAGTGGAGGAAG+GGG | + | chr5_3:65425028-65425047 | None:intergenic | 55.0% | |
GGGAAAGAGGAGTGGAGGAA+GGG | + | chr5_3:65425029-65425048 | None:intergenic | 55.0% | |
AGGGAAAGAGGAGTGGAGGA+AGG | + | chr5_3:65425030-65425049 | None:intergenic | 55.0% | |
! | CCCACACTTGCTGCAAGCTT+TGG | - | chr5_3:65425113-65425132 | Msa0825540:three_prime_UTR | 55.0% |
ATTCACACCCATGCTGGTCC+TGG | - | chr5_3:65426762-65426781 | Msa0825540:intron | 55.0% | |
TTCACACCCATGCTGGTCCT+GGG | - | chr5_3:65426763-65426782 | Msa0825540:intron | 55.0% | |
GCACATGAAAATCTCCGCCC+AGG | - | chr5_3:65426885-65426904 | Msa0825540:intron | 55.0% | |
ATCGGCGTGTTAGTGTCTGG+TGG | - | chr5_3:65427307-65427326 | Msa0825540:CDS | 55.0% | |
CGGATTGTTGAGGTAAGCGC+TGG | + | chr5_3:65427531-65427550 | None:intergenic | 55.0% | |
TCTCTGCAGCCGGATTGTTG+AGG | + | chr5_3:65427541-65427560 | None:intergenic | 55.0% | |
GTCCTTCGGGAAGCTTCAAC+TGG | - | chr5_3:65427627-65427646 | Msa0825540:CDS | 55.0% | |
!! | GGGTGCTGCTGCACGATTTA+TGG | - | chr5_3:65427709-65427728 | Msa0825540:intron | 55.0% |
!! | GTTTTGGTCGCTGGTCTACC+GGG | + | chr5_3:65428503-65428522 | None:intergenic | 55.0% |
TGCCCTGCTGCAATGGGATT+TGG | - | chr5_3:65429008-65429027 | Msa0825540:CDS | 55.0% | |
! | GCTGGAACAACTGATGGACC+CGG | - | chr5_3:65429038-65429057 | Msa0825540:intron | 55.0% |
! | GGGGAACCCTTTCTGGAAAC+TGG | - | chr5_3:65429174-65429193 | Msa0825540:intron | 55.0% |
TCACAACAATGGCTGGGAGG+CGG | - | chr5_3:65430264-65430283 | Msa0825540:intron | 55.0% | |
! | GACCACATACGAGGAGTACG+AGG | - | chr5_3:65430388-65430407 | Msa0825540:CDS | 55.0% |
CACCTCGTACTCCTCGTATG+TGG | + | chr5_3:65430393-65430412 | None:intergenic | 55.0% | |
AACGGCCAGCCTGTAGAATC+AGG | - | chr5_3:65430919-65430938 | Msa0825540:intron | 55.0% | |
GGGGTTCCATCCATCACTAC+TGG | + | chr5_3:65430991-65431010 | None:intergenic | 55.0% | |
!! | GTGATGGATGGAACCCCTCT+TGG | - | chr5_3:65430994-65431013 | Msa0825540:intron | 55.0% |
ACACCAGGAGCTACATCCTG+TGG | + | chr5_3:65431279-65431298 | None:intergenic | 55.0% | |
TCACACCCATGCTGGTCCTG+GGG | - | chr5_3:65426764-65426783 | Msa0825540:intron | 60.0% | |
ATACCCCCCAGGACCAGCAT+GGG | + | chr5_3:65426772-65426791 | None:intergenic | 60.0% | |
CTGGTCTACCGGGAGGAGAT+TGG | + | chr5_3:65428493-65428512 | None:intergenic | 60.0% | |
TTATGCTATGGCCGGGGACC+TGG | - | chr5_3:65428701-65428720 | Msa0825540:intron | 60.0% | |
TATGCTATGGCCGGGGACCT+GGG | - | chr5_3:65428702-65428721 | Msa0825540:intron | 60.0% | |
GGTTGCGGGCCTGATTCTAC+AGG | + | chr5_3:65430931-65430950 | None:intergenic | 60.0% | |
TCCAGGAGGTCTGGTGGTTG+CGG | + | chr5_3:65430946-65430965 | None:intergenic | 60.0% | |
TGCTTGTCCAGGAGGTCTGG+TGG | + | chr5_3:65430952-65430971 | None:intergenic | 60.0% | |
CACACCCATGCTGGTCCTGG+GGG | - | chr5_3:65426765-65426784 | Msa0825540:intron | 65.0% | |
ACACCCATGCTGGTCCTGGG+GGG | - | chr5_3:65426766-65426785 | Msa0825540:intron | 65.0% | |
GATACCCCCCAGGACCAGCA+TGG | + | chr5_3:65426773-65426792 | None:intergenic | 65.0% | |
! | TTGGTCGCTGGTCTACCGGG+AGG | + | chr5_3:65428500-65428519 | None:intergenic | 65.0% |
GCGGGCCTGATTCTACAGGC+TGG | + | chr5_3:65430927-65430946 | None:intergenic | 65.0% | |
CCAGGAGGTCTGGTGGTTGC+GGG | + | chr5_3:65430945-65430964 | None:intergenic | 65.0% | |
CCCGCAACCACCAGACCTCC+TGG | - | chr5_3:65430942-65430961 | Msa0825540:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 65424928 | 65431623 | 65424928 | ID=Msa0825540;Name=Msa0825540 |
chr5_3 | mRNA | 65424928 | 65431623 | 65424928 | ID=Msa0825540-mRNA-1;Parent=Msa0825540;Name=Msa0825540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=336|1|1|1|0.88|0.8|10|231|778 |
chr5_3 | exon | 65424928 | 65425710 | 65424928 | ID=Msa0825540-mRNA-1:exon:20525;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65426127 | 65426290 | 65426127 | ID=Msa0825540-mRNA-1:exon:20524;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65426782 | 65426845 | 65426782 | ID=Msa0825540-mRNA-1:exon:20523;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65427251 | 65427376 | 65427251 | ID=Msa0825540-mRNA-1:exon:20522;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65427460 | 65427727 | 65427460 | ID=Msa0825540-mRNA-1:exon:20521;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65427828 | 65428092 | 65427828 | ID=Msa0825540-mRNA-1:exon:20520;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65428712 | 65429056 | 65428712 | ID=Msa0825540-mRNA-1:exon:20519;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65429624 | 65429832 | 65429624 | ID=Msa0825540-mRNA-1:exon:20518;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65430290 | 65430707 | 65430290 | ID=Msa0825540-mRNA-1:exon:20517;Parent=Msa0825540-mRNA-1 |
chr5_3 | exon | 65431362 | 65431623 | 65431362 | ID=Msa0825540-mRNA-1:exon:20516;Parent=Msa0825540-mRNA-1 |
chr5_3 | five_prime_UTR | 65431362 | 65431623 | 65431362 | ID=Msa0825540-mRNA-1:five_prime_utr;Parent=Msa0825540-mRNA-1 |
chr5_3 | five_prime_UTR | 65430634 | 65430707 | 65430634 | ID=Msa0825540-mRNA-1:five_prime_utr;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65430290 | 65430633 | 65430290 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65429624 | 65429832 | 65429624 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65428712 | 65429056 | 65428712 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65427828 | 65428092 | 65427828 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65427460 | 65427727 | 65427460 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65427251 | 65427376 | 65427251 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65426782 | 65426845 | 65426782 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65426127 | 65426290 | 65426127 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | CDS | 65425159 | 65425710 | 65425159 | ID=Msa0825540-mRNA-1:cds;Parent=Msa0825540-mRNA-1 |
chr5_3 | three_prime_UTR | 65424928 | 65425158 | 65424928 | ID=Msa0825540-mRNA-1:three_prime_utr;Parent=Msa0825540-mRNA-1 |
Gene Sequence |
Protein sequence |