Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747770 | sp|Q9ASU8|NDL2_ARATH | 78.769 | 325 | 68 | 1 | 4 | 328 | 20 | 343 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747770 | G7IB94 | 98.476 | 328 | 5 | 0 | 4 | 331 | 22 | 349 | 0.0 | 672 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005040 | Msa0747770 | 0.991378 | 2.486458e-187 | -8.615850e-47 |
| Msa0053100 | Msa0747770 | 0.969942 | 7.191865e-131 | -8.615850e-47 |
| Msa0098430 | Msa0747770 | 0.876335 | 1.515661e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747770 | MtrunA17_Chr1g0151691 | 98.777 | 327 | 4 | 0 | 5 | 331 | 2 | 328 | 0.0 | 671 |
| Msa0747770 | MtrunA17_Chr8g0389281 | 78.963 | 328 | 69 | 0 | 4 | 331 | 20 | 347 | 0.0 | 545 |
| Msa0747770 | MtrunA17_Chr1g0190891 | 65.569 | 334 | 108 | 1 | 4 | 330 | 20 | 353 | 9.91e-166 | 465 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747770 | AT5G11790.1 | 78.769 | 325 | 68 | 1 | 4 | 328 | 20 | 343 | 0.0 | 531 |
| Msa0747770 | AT5G56750.1 | 76.994 | 326 | 75 | 0 | 4 | 329 | 20 | 345 | 0.0 | 528 |
| Msa0747770 | AT5G56750.2 | 77.231 | 325 | 74 | 0 | 5 | 329 | 2 | 326 | 0.0 | 528 |
| Msa0747770 | AT2G19620.1 | 73.148 | 324 | 87 | 0 | 4 | 327 | 20 | 343 | 0.0 | 509 |
| Msa0747770 | AT2G19620.2 | 73.375 | 323 | 86 | 0 | 5 | 327 | 2 | 324 | 0.0 | 508 |
| Msa0747770 | AT5G11790.2 | 80.556 | 288 | 55 | 1 | 41 | 328 | 3 | 289 | 1.35e-172 | 481 |
| Msa0747770 | AT2G19620.3 | 72.664 | 289 | 79 | 0 | 39 | 327 | 1 | 289 | 1.49e-159 | 447 |
Find 106 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTAATTCTAGTCTTTAT+AGG | 0.167495 | 5_2:-594058 | None:intergenic |
| ATCAGACGTCTCCTGCTTTC+AGG | 0.185516 | 5_2:+591297 | Msa0747770:intron |
| AATGGGAAATATGATGAAAT+AGG | 0.223204 | 5_2:+594175 | Msa0747770:three_prime_UTR |
| TCTTGGGCTGACACTGTTCC+TGG | 0.235018 | 5_2:-593966 | None:intergenic |
| TCTTATCACCTATCCTGATT+TGG | 0.248488 | 5_2:+590860 | Msa0747770:CDS |
| CGGTTCCTTGAAGCTATTAA+TGG | 0.259213 | 5_2:+593307 | Msa0747770:CDS |
| CTTATCACCTATCCTGATTT+GGG | 0.262260 | 5_2:+590861 | Msa0747770:CDS |
| TGCCGTATGGTTGTAGATAA+TGG | 0.280783 | 5_2:+594201 | Msa0747770:three_prime_UTR |
| TCGCGGTGGTACTCAATTTC+CGG | 0.287965 | 5_2:+592337 | Msa0747770:CDS |
| CCTATAAAGACTAGAATTAC+TGG | 0.294839 | 5_2:+594058 | Msa0747770:CDS |
| AAATATCGACAACGTGTTCT+TGG | 0.298043 | 5_2:+592014 | Msa0747770:CDS |
| TCTGTCTCTGTTGCTGTGTA+TGG | 0.298337 | 5_2:+590819 | Msa0747770:CDS |
| GATGGACTCAAGGGACTTCT+TGG | 0.315273 | 5_2:-593983 | None:intergenic |
| ATGAAAACTTACAGCAAATA+AGG | 0.336620 | 5_2:-591917 | None:intergenic |
| GAAATAAGAAATCAACAAAA+AGG | 0.341696 | 5_2:+594232 | Msa0747770:three_prime_UTR |
| TGTCTAACTTTGTAGTGATA+TGG | 0.350373 | 5_2:-593713 | None:intergenic |
| AGCAGCAAGTAATATGCTTC+TGG | 0.352622 | 5_2:-591334 | None:intergenic |
| CTGTCTCTGTTGCTGTGTAT+GGG | 0.372972 | 5_2:+590820 | Msa0747770:CDS |
| CTCAATCCTTCACTTAGGTC+AGG | 0.378178 | 5_2:-593627 | None:intergenic |
| TTACAATTTAAACCCAAATC+AGG | 0.381571 | 5_2:-590873 | None:intergenic |
| TCAGACGTCTCCTGCTTTCA+GGG | 0.390147 | 5_2:+591298 | Msa0747770:intron |
| ACAGATAGAACAGGATAATC+TGG | 0.390788 | 5_2:-591545 | None:intergenic |
| GTTGTAGATAATGGGATATA+AGG | 0.397529 | 5_2:+594210 | Msa0747770:three_prime_UTR |
| ATGGGAAATATGATGAAATA+GGG | 0.398319 | 5_2:+594176 | Msa0747770:three_prime_UTR |
| GAGTACTTTCTCATGGGATA+TGG | 0.412981 | 5_2:+593929 | Msa0747770:CDS |
| GCCGTATGGTTGTAGATAAT+GGG | 0.419726 | 5_2:+594202 | Msa0747770:three_prime_UTR |
| TGGAGTGCCTCTGAGTGATA+TGG | 0.433217 | 5_2:-593693 | None:intergenic |
| TCTTAATGCAGTTATGTGTA+TGG | 0.436829 | 5_2:+591867 | Msa0747770:CDS |
| GTTTCGTAAACAGATCTTAC+GGG | 0.440120 | 5_2:-594130 | None:intergenic |
| TGGCATGTGTGGGGTGGTAA+AGG | 0.440330 | 5_2:+592202 | Msa0747770:CDS |
| GGTTCCTTGAAGCTATTAAT+GGG | 0.446324 | 5_2:+593308 | Msa0747770:CDS |
| GATTGAGAAACCTACATTGC+CGG | 0.456707 | 5_2:+593643 | Msa0747770:CDS |
| CATACCCATTAATAGCTTCA+AGG | 0.466016 | 5_2:-593312 | None:intergenic |
| TGTTTCGTAAACAGATCTTA+CGG | 0.475222 | 5_2:-594131 | None:intergenic |
| CTCTATGTAAAGAACCATCT+TGG | 0.476906 | 5_2:+592054 | Msa0747770:CDS |
| CAATTTCAAACCCATACTCT+CGG | 0.479414 | 5_2:-594032 | None:intergenic |
| GGTTTCTCAATCCTTCACTT+AGG | 0.485709 | 5_2:-593632 | None:intergenic |
| TGCTACTGATATGTATCTGC+AGG | 0.492091 | 5_2:+590770 | Msa0747770:exon |
| TGTTGCTGTGTATGGGGACC+AGG | 0.494219 | 5_2:+590827 | Msa0747770:CDS |
| AAATTAGTGACCGGCAATGT+AGG | 0.494981 | 5_2:-593653 | None:intergenic |
| ATGGTCTGTACAGGCCATCC+AGG | 0.496740 | 5_2:+593948 | Msa0747770:CDS |
| TGATAAGAGCTGGTTTGTCC+TGG | 0.497015 | 5_2:-590845 | None:intergenic |
| GGTTCAAGCATGCGGGTCAA+TGG | 0.498997 | 5_2:+593868 | Msa0747770:intron |
| ATGGACTCAAGGGACTTCTT+GGG | 0.500002 | 5_2:-593982 | None:intergenic |
| CTATAAAGACTAGAATTACT+GGG | 0.502276 | 5_2:+594059 | Msa0747770:CDS |
| AAGTCATCTACAGATAGAAC+AGG | 0.502528 | 5_2:-591554 | None:intergenic |
| GGGCTGACACTGTTCCTGGA+TGG | 0.506295 | 5_2:-593962 | None:intergenic |
| CTATTTACATACCTCAACTA+AGG | 0.516795 | 5_2:-593748 | None:intergenic |
| TGTGTATGGGAGTAACTGCT+GGG | 0.517895 | 5_2:+591881 | Msa0747770:CDS |
| ACCAATGGAGTACTTTCTCA+TGG | 0.518496 | 5_2:+593922 | Msa0747770:CDS |
| TCATGGGATATGGTCTGTAC+AGG | 0.520593 | 5_2:+593939 | Msa0747770:CDS |
| CCATGCCATGTTAATACCAA+TGG | 0.521144 | 5_2:+593907 | Msa0747770:CDS |
| CATTGGTATTAACATGGCAT+GGG | 0.528281 | 5_2:-593906 | None:intergenic |
| CAAGATGGTTCTTTACATAG+AGG | 0.528987 | 5_2:-592053 | None:intergenic |
| ATGTGTATGGGAGTAACTGC+TGG | 0.530635 | 5_2:+591880 | Msa0747770:CDS |
| AATTTCAAACCCATACTCTC+GGG | 0.533634 | 5_2:-594031 | None:intergenic |
| CCATTGGTATTAACATGGCA+TGG | 0.534695 | 5_2:-593907 | None:intergenic |
| TATTACAGTCTTTGGATGAG+AGG | 0.535492 | 5_2:+593266 | Msa0747770:intron |
| AAATAATAACCCCTGAAAGC+AGG | 0.537854 | 5_2:-591308 | None:intergenic |
| CTTAATGCAGTTATGTGTAT+GGG | 0.543450 | 5_2:+591868 | Msa0747770:CDS |
| TGTCTCTGTTGCTGTGTATG+GGG | 0.548337 | 5_2:+590821 | Msa0747770:CDS |
| GATGAATAATGATGGTTGGT+TGG | 0.550240 | 5_2:+594096 | Msa0747770:three_prime_UTR |
| TCAGGATAGGTGATAAGAGC+TGG | 0.553536 | 5_2:-590855 | None:intergenic |
| AGCTCAGGAGAAATACAAGA+TGG | 0.560956 | 5_2:-594001 | None:intergenic |
| CATTAGTCCACCTGGGCATG+AGG | 0.562740 | 5_2:+591378 | Msa0747770:CDS |
| TTGTGGTGATAGGAAATTCG+CGG | 0.562990 | 5_2:+592320 | Msa0747770:intron |
| CCCATGAGAAAGTACTCCAT+TGG | 0.566374 | 5_2:-593923 | None:intergenic |
| TCTATCTGTAGATGACTTAG+CGG | 0.567432 | 5_2:+591559 | Msa0747770:CDS |
| ATATATCACATTAGTCCACC+TGG | 0.572606 | 5_2:+591370 | Msa0747770:CDS |
| AGAAATACAAGATGGACTCA+AGG | 0.575493 | 5_2:-593993 | None:intergenic |
| ACGATTCAGTGCCTTAGTTG+AGG | 0.579061 | 5_2:+593737 | Msa0747770:CDS |
| TAAAGGAAATATTGCTGAAG+CGG | 0.583967 | 5_2:+592219 | Msa0747770:CDS |
| AATTACAGGTTCAAGCATGC+GGG | 0.584432 | 5_2:+593861 | Msa0747770:intron |
| TCCCATTATCTACAACCATA+CGG | 0.588077 | 5_2:-594203 | None:intergenic |
| GTCTGAGTGGTTGTACAACA+AGG | 0.588354 | 5_2:+592076 | Msa0747770:CDS |
| ATTTAAACCCAAATCAGGAT+AGG | 0.588603 | 5_2:-590868 | None:intergenic |
| TAATTACAGGTTCAAGCATG+CGG | 0.591579 | 5_2:+593860 | Msa0747770:intron |
| CCAATGGAGTACTTTCTCAT+GGG | 0.603018 | 5_2:+593923 | Msa0747770:CDS |
| AAGCTACAGACCTCATGCCC+AGG | 0.603979 | 5_2:-591388 | None:intergenic |
| CAGACGTCTCCTGCTTTCAG+GGG | 0.604861 | 5_2:+591299 | Msa0747770:intron |
| ATGAAATAGGGAGTGCCGTA+TGG | 0.610934 | 5_2:+594188 | Msa0747770:three_prime_UTR |
| CATATTATCAGAACATGTCA+TGG | 0.611620 | 5_2:+590795 | Msa0747770:CDS |
| TAGAAGTAGATGAATAATGA+TGG | 0.612606 | 5_2:+594088 | Msa0747770:exon |
| ATATAGTCAAAGCATGCCGA+AGG | 0.612760 | 5_2:+592366 | Msa0747770:CDS |
| GTACAATTGTAAAGCAAACA+TGG | 0.617571 | 5_2:+594402 | Msa0747770:three_prime_UTR |
| AGTAGATGAATAATGATGGT+TGG | 0.627590 | 5_2:+594092 | Msa0747770:three_prime_UTR |
| GAAATACAAGATGGACTCAA+GGG | 0.627901 | 5_2:-593992 | None:intergenic |
| GCTTTGACTATATCTGACTC+CGG | 0.640759 | 5_2:-592356 | None:intergenic |
| AGGAGACCTGACCTAAGTGA+AGG | 0.640781 | 5_2:+593621 | Msa0747770:intron |
| TACAACCACTCAGACCAAGA+TGG | 0.652299 | 5_2:-592068 | None:intergenic |
| AGAGGCAAAGCTTGAATGTG+TGG | 0.655732 | 5_2:+593284 | Msa0747770:CDS |
| CTACAGACCTCATGCCCAGG+TGG | 0.662824 | 5_2:-591385 | None:intergenic |
| ATTGGTATTAACATGGCATG+GGG | 0.665921 | 5_2:-593905 | None:intergenic |
| GGCAAAGCTTGAATGTGTGG+CGG | 0.666001 | 5_2:+593287 | Msa0747770:CDS |
| TATATCACATTAGTCCACCT+GGG | 0.675970 | 5_2:+591371 | Msa0747770:CDS |
| GTACTCCATTGGTATTAACA+TGG | 0.679020 | 5_2:-593912 | None:intergenic |
| ATGCGGGTCAATGGTAACAG+AGG | 0.682086 | 5_2:+593877 | Msa0747770:CDS |
| GTGTATGGGAGTAACTGCTG+GGG | 0.683228 | 5_2:+591882 | Msa0747770:CDS |
| TATAGTCAAAGCATGCCGAA+GGG | 0.685136 | 5_2:+592367 | Msa0747770:CDS |
| TATAAAGACTAGAATTACTG+GGG | 0.686762 | 5_2:+594060 | Msa0747770:CDS |
| TTTCGTAAACAGATCTTACG+GGG | 0.688716 | 5_2:-594129 | None:intergenic |
| TGGTGATAGGAAATTCGCGG+TGG | 0.707804 | 5_2:+592323 | Msa0747770:intron |
| CTTAGCGGATCAAATAGCTG+AGG | 0.709294 | 5_2:+591574 | Msa0747770:CDS |
| AAGAACCATCTTGGTCTGAG+TGG | 0.713563 | 5_2:+592063 | Msa0747770:CDS |
| TATGTCTCCATATCACTCAG+AGG | 0.729931 | 5_2:+593686 | Msa0747770:CDS |
| CAATTGTAAAGCAAACATGG+AGG | 0.793931 | 5_2:+594405 | Msa0747770:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTATTTTGCTAA+AGG | + | chr5_2:594370-594389 | Msa0747770:three_prime_UTR | 10.0% |
| !!! | TTCTTTGTATAAAACATTTT+AGG | - | chr5_2:591156-591175 | None:intergenic | 15.0% |
| !! | TAAGTAAATTAAAGTCATTT+GGG | - | chr5_2:591964-591983 | None:intergenic | 15.0% |
| !! | TTAAGTAAATTAAAGTCATT+TGG | - | chr5_2:591965-591984 | None:intergenic | 15.0% |
| !!! | AACATATTTTATTTTCATGT+AGG | + | chr5_2:592396-592415 | Msa0747770:intron | 15.0% |
| !!! | ACATATTTTATTTTCATGTA+GGG | + | chr5_2:592397-592416 | Msa0747770:intron | 15.0% |
| !! | ATGCCTTTATATTAAATAAT+TGG | + | chr5_2:592741-592760 | Msa0747770:intron | 15.0% |
| !! | TTGCCAATTATTTAATATAA+AGG | - | chr5_2:592747-592766 | None:intergenic | 15.0% |
| !!! | TAATTAATTTTTGACAATGT+TGG | - | chr5_2:592970-592989 | None:intergenic | 15.0% |
| !!! | TTTTTAATTCAAATATCTCT+AGG | + | chr5_2:593021-593040 | Msa0747770:intron | 15.0% |
| !! | ACTTAAATTCAATATGTTTA+GGG | + | chr5_2:593529-593548 | Msa0747770:intron | 15.0% |
| !! | ATCACAAAGTTAAATAAAAA+TGG | - | chr5_2:593591-593610 | None:intergenic | 15.0% |
| !!! | ATTTTTATTTAACTTTGTGA+TGG | + | chr5_2:593590-593609 | Msa0747770:intron | 15.0% |
| !!! | AAAATAATGGAAAAAGTCAA+GGG | - | chr5_2:590928-590947 | None:intergenic | 20.0% |
| !!! | AAAAATAATGGAAAAAGTCA+AGG | - | chr5_2:590929-590948 | None:intergenic | 20.0% |
| !! | AGAAAAGAAATACTTTAATG+AGG | - | chr5_2:591114-591133 | None:intergenic | 20.0% |
| !!! | AGTCTAATTTTTTCTTTTCA+TGG | + | chr5_2:591256-591275 | Msa0747770:intron | 20.0% |
| !! | TATAGATATTCATAACAGTA+AGG | - | chr5_2:591439-591458 | None:intergenic | 20.0% |
| !!! | TCAAATTTACTGTACTTTTA+TGG | + | chr5_2:592182-592201 | Msa0747770:CDS | 20.0% |
| !! | ACAAATAAAAGTAAATGACT+CGG | - | chr5_2:592304-592323 | None:intergenic | 20.0% |
| !!! | ATTGATATTTTTGGACATTA+TGG | + | chr5_2:592573-592592 | Msa0747770:intron | 20.0% |
| !! | CATCTAATAAGGAAAAAATT+GGG | - | chr5_2:592689-592708 | None:intergenic | 20.0% |
| !! | TCATCTAATAAGGAAAAAAT+TGG | - | chr5_2:592690-592709 | None:intergenic | 20.0% |
| !!! | TTTCAACTCATTTTACAATT+AGG | + | chr5_2:593070-593089 | Msa0747770:intron | 20.0% |
| !! | TAATAAATATATCAAGAGTC+AGG | - | chr5_2:593251-593270 | None:intergenic | 20.0% |
| !! | GATATATTTATTACAGTCTT+TGG | + | chr5_2:593258-593277 | Msa0747770:intron | 20.0% |
| !!! | TGATTTTCATTTTCTTTTTG+AGG | + | chr5_2:593355-593374 | Msa0747770:intron | 20.0% |
| !!! | GATTTTCATTTTCTTTTTGA+GGG | + | chr5_2:593356-593375 | Msa0747770:intron | 20.0% |
| !! | CACTTAAATTCAATATGTTT+AGG | + | chr5_2:593528-593547 | Msa0747770:intron | 20.0% |
| !!! | TCATTTTTCTATGATTAGAA+TGG | + | chr5_2:594157-594176 | Msa0747770:three_prime_UTR | 20.0% |
| !!! | CATTTTTCTATGATTAGAAT+GGG | + | chr5_2:594158-594177 | Msa0747770:three_prime_UTR | 20.0% |
| !! | GAAATAAGAAATCAACAAAA+AGG | + | chr5_2:594232-594251 | Msa0747770:three_prime_UTR | 20.0% |
| !!! | TCACAGTCTATATATTTTAT+TGG | + | chr5_2:594479-594498 | Msa0747770:three_prime_UTR | 20.0% |
| ! | TTACAATTTAAACCCAAATC+AGG | - | chr5_2:590876-590895 | None:intergenic | 25.0% |
| ! | GGTTTAAATTGTAAGTAAAC+TGG | + | chr5_2:590882-590901 | Msa0747770:intron | 25.0% |
| !!! | TTCCATTATTTTTGTACTAC+AGG | + | chr5_2:590936-590955 | Msa0747770:intron | 25.0% |
| !!! | TCCATTATTTTTGTACTACA+GGG | + | chr5_2:590937-590956 | Msa0747770:intron | 25.0% |
| ! | TTGTCAAAACTAAATGTACT+GGG | - | chr5_2:591027-591046 | None:intergenic | 25.0% |
| ! | TTTGTCAAAACTAAATGTAC+TGG | - | chr5_2:591028-591047 | None:intergenic | 25.0% |
| !! | GGAAATGAAACGTATATTTT+AGG | - | chr5_2:591093-591112 | None:intergenic | 25.0% |
| !! | TTTTCATGGACATAATATTG+CGG | + | chr5_2:591270-591289 | Msa0747770:intron | 25.0% |
| ! | TGTGATATATGCAAAAATTG+TGG | - | chr5_2:591360-591379 | None:intergenic | 25.0% |
| ! | TTGAATGCTTATAATTTACC+TGG | + | chr5_2:591462-591481 | Msa0747770:intron | 25.0% |
| ! | AAAAAAAAAAAAGAGCAGCA+GGG | - | chr5_2:591844-591863 | None:intergenic | 25.0% |
| ! | ATGAAAACTTACAGCAAATA+AGG | - | chr5_2:591920-591939 | None:intergenic | 25.0% |
| !! | TTTTACAAGACATGATGTTT+CGG | - | chr5_2:592115-592134 | None:intergenic | 25.0% |
| ! | AAAGAATTTGTGATATTTGC+AGG | + | chr5_2:592154-592173 | Msa0747770:intron | 25.0% |
| !!! | GAGTCATTTACTTTTATTTG+TGG | + | chr5_2:592303-592322 | Msa0747770:intron | 25.0% |
| !!! | TTACTTTTATTTGTGGTGAT+AGG | + | chr5_2:592310-592329 | Msa0747770:intron | 25.0% |
| ! | AAAATGATAAATTACTGGGT+GGG | - | chr5_2:592511-592530 | None:intergenic | 25.0% |
| ! | GGACAAAATGATAAATTACT+GGG | - | chr5_2:592515-592534 | None:intergenic | 25.0% |
| ! | CCAAAAATATCAATTGCTTT+GGG | - | chr5_2:592567-592586 | None:intergenic | 25.0% |
| ! | TCCAAAAATATCAATTGCTT+TGG | - | chr5_2:592568-592587 | None:intergenic | 25.0% |
| ! | TTAAATCTTCAATGCATGTA+CGG | + | chr5_2:592881-592900 | Msa0747770:intron | 25.0% |
| ! | CTGAATGCTTATTTATTGAA+TGG | - | chr5_2:593049-593068 | None:intergenic | 25.0% |
| ! | TTCCAAAACTAATACATCAA+TGG | + | chr5_2:593120-593139 | Msa0747770:intron | 25.0% |
| !!! | TACCATTGATGTATTAGTTT+TGG | - | chr5_2:593125-593144 | None:intergenic | 25.0% |
| ! | ATCATATATACTTGTATGCA+TGG | + | chr5_2:593460-593479 | Msa0747770:intron | 25.0% |
| ! | TTTGCATCAAAATTCAAAAC+AGG | - | chr5_2:593497-593516 | None:intergenic | 25.0% |
| ! | CTATAAAGACTAGAATTACT+GGG | + | chr5_2:594059-594078 | Msa0747770:CDS | 25.0% |
| ! | TATAAAGACTAGAATTACTG+GGG | + | chr5_2:594060-594079 | Msa0747770:CDS | 25.0% |
| ! | TAGAAGTAGATGAATAATGA+TGG | + | chr5_2:594088-594107 | Msa0747770:exon | 25.0% |
| ! | AATGGGAAATATGATGAAAT+AGG | + | chr5_2:594175-594194 | Msa0747770:three_prime_UTR | 25.0% |
| ! | ATGGGAAATATGATGAAATA+GGG | + | chr5_2:594176-594195 | Msa0747770:three_prime_UTR | 25.0% |
| ! | ATCAACAAAAAGGAAAGAAA+AGG | + | chr5_2:594242-594261 | Msa0747770:three_prime_UTR | 25.0% |
| !!! | ACAACAACTTTTTCAAAGTA+GGG | - | chr5_2:594446-594465 | None:intergenic | 25.0% |
| !!! | TACAACAACTTTTTCAAAGT+AGG | - | chr5_2:594447-594466 | None:intergenic | 25.0% |
| CATATTATCAGAACATGTCA+TGG | + | chr5_2:590795-590814 | Msa0747770:CDS | 30.0% | |
| ATTTAAACCCAAATCAGGAT+AGG | - | chr5_2:590871-590890 | None:intergenic | 30.0% | |
| !! | TTTTAGGAGCAAATCTTGAT+GGG | - | chr5_2:591140-591159 | None:intergenic | 30.0% |
| !! | ATTTTAGGAGCAAATCTTGA+TGG | - | chr5_2:591141-591160 | None:intergenic | 30.0% |
| !!! | CAAATCTAAATGTCGTTTTG+TGG | + | chr5_2:591179-591198 | Msa0747770:intron | 30.0% |
| !!! | TGTCGTTTTGTGGATTTTAT+CGG | + | chr5_2:591189-591208 | Msa0747770:intron | 30.0% |
| ATCGGAAATGTTTACTTTCT+TGG | + | chr5_2:591207-591226 | Msa0747770:intron | 30.0% | |
| AATTACTTCGTGACACTAAA+TGG | - | chr5_2:591650-591669 | None:intergenic | 30.0% | |
| !! | CTCTATCTGGCTTTAAATAT+TGG | + | chr5_2:591683-591702 | Msa0747770:intron | 30.0% |
| GAAAAAAAAAAAAGAGCAGC+AGG | - | chr5_2:591845-591864 | None:intergenic | 30.0% | |
| TCTTAATGCAGTTATGTGTA+TGG | + | chr5_2:591867-591886 | Msa0747770:CDS | 30.0% | |
| CTTAATGCAGTTATGTGTAT+GGG | + | chr5_2:591868-591887 | Msa0747770:CDS | 30.0% | |
| TAAAGGAAATATTGCTGAAG+CGG | + | chr5_2:592219-592238 | Msa0747770:CDS | 30.0% | |
| CTAACACTGAAAATAGAACA+AGG | - | chr5_2:592280-592299 | None:intergenic | 30.0% | |
| ! | CTTGTTCTATTTTCAGTGTT+AGG | + | chr5_2:592278-592297 | Msa0747770:intron | 30.0% |
| ! | AAATATGTTGACTAACCCTT+CGG | - | chr5_2:592385-592404 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCATGTAGGGAC+TGG | + | chr5_2:592402-592421 | Msa0747770:intron | 30.0% |
| !! | TTTATTTTCATGTAGGGACT+GGG | + | chr5_2:592403-592422 | Msa0747770:intron | 30.0% |
| GTTTAAGTGGCATTTAACAT+GGG | + | chr5_2:592425-592444 | Msa0747770:intron | 30.0% | |
| CAAAATGATAAATTACTGGG+TGG | - | chr5_2:592512-592531 | None:intergenic | 30.0% | |
| GGGACAAAATGATAAATTAC+TGG | - | chr5_2:592516-592535 | None:intergenic | 30.0% | |
| ATGATGTCTTCTTGATACTT+CGG | - | chr5_2:592537-592556 | None:intergenic | 30.0% | |
| ! | CCCAAAGCAATTGATATTTT+TGG | + | chr5_2:592564-592583 | Msa0747770:intron | 30.0% |
| GAAAAAATTGGGATGAAGAA+AGG | - | chr5_2:592678-592697 | None:intergenic | 30.0% | |
| AATGTGCATTTGACTATGTT+GGG | + | chr5_2:593146-593165 | Msa0747770:intron | 30.0% | |
| ! | GGTATGATATTTTACTTCCA+AGG | + | chr5_2:593329-593348 | Msa0747770:intron | 30.0% |
| GAAAATGAAAATCACAACCT+TGG | - | chr5_2:593349-593368 | None:intergenic | 30.0% | |
| !! | TTTCATTTTCTTTTTGAGGG+TGG | + | chr5_2:593359-593378 | Msa0747770:intron | 30.0% |
| !! | TTCATTTTCTTTTTGAGGGT+GGG | + | chr5_2:593360-593379 | Msa0747770:intron | 30.0% |
| CAACATGTTAGTTATTGCTA+AGG | + | chr5_2:593415-593434 | Msa0747770:intron | 30.0% | |
| ! | ACTGTAATGTTATGTTGCTT+AGG | + | chr5_2:593557-593576 | Msa0747770:intron | 30.0% |
| ! | CTGTAATGTTATGTTGCTTA+GGG | + | chr5_2:593558-593577 | Msa0747770:intron | 30.0% |
| TGTCTAACTTTGTAGTGATA+TGG | - | chr5_2:593716-593735 | None:intergenic | 30.0% | |
| CTATTTACATACCTCAACTA+AGG | - | chr5_2:593751-593770 | None:intergenic | 30.0% | |
| ! | CCAGTAATTCTAGTCTTTAT+AGG | - | chr5_2:594061-594080 | None:intergenic | 30.0% |
| CCTATAAAGACTAGAATTAC+TGG | + | chr5_2:594058-594077 | Msa0747770:CDS | 30.0% | |
| AGTAGATGAATAATGATGGT+TGG | + | chr5_2:594092-594111 | Msa0747770:three_prime_UTR | 30.0% | |
| TGTTTCGTAAACAGATCTTA+CGG | - | chr5_2:594134-594153 | None:intergenic | 30.0% | |
| !! | GTTGTAGATAATGGGATATA+AGG | + | chr5_2:594210-594229 | Msa0747770:three_prime_UTR | 30.0% |
| GTACAATTGTAAAGCAAACA+TGG | + | chr5_2:594402-594421 | Msa0747770:three_prime_UTR | 30.0% | |
| !!! | CAACAACTTTTTCAAAGTAG+GGG | - | chr5_2:594445-594464 | None:intergenic | 30.0% |
| TCTTATCACCTATCCTGATT+TGG | + | chr5_2:590860-590879 | Msa0747770:CDS | 35.0% | |
| CTTATCACCTATCCTGATTT+GGG | + | chr5_2:590861-590880 | Msa0747770:CDS | 35.0% | |
| GCCCTGTAGTACAAAAATAA+TGG | - | chr5_2:590941-590960 | None:intergenic | 35.0% | |
| AAATAATAACCCCTGAAAGC+AGG | - | chr5_2:591311-591330 | None:intergenic | 35.0% | |
| ATATATCACATTAGTCCACC+TGG | + | chr5_2:591370-591389 | Msa0747770:CDS | 35.0% | |
| TATATCACATTAGTCCACCT+GGG | + | chr5_2:591371-591390 | Msa0747770:CDS | 35.0% | |
| ACAGATAGAACAGGATAATC+TGG | - | chr5_2:591548-591567 | None:intergenic | 35.0% | |
| AAGTCATCTACAGATAGAAC+AGG | - | chr5_2:591557-591576 | None:intergenic | 35.0% | |
| TCTATCTGTAGATGACTTAG+CGG | + | chr5_2:591559-591578 | Msa0747770:CDS | 35.0% | |
| !!! | CTGAGGTGCTTAACTTTTTT+GGG | + | chr5_2:591591-591610 | Msa0747770:CDS | 35.0% |
| ! | ATTTGAAGCTCCTTCTGTAA+TGG | + | chr5_2:591736-591755 | Msa0747770:intron | 35.0% |
| TTCAATCTGTCCATTACAGA+AGG | - | chr5_2:591749-591768 | None:intergenic | 35.0% | |
| AATGGACAGATTGAAAGTGA+CGG | + | chr5_2:591754-591773 | Msa0747770:intron | 35.0% | |
| AAATATCGACAACGTGTTCT+TGG | + | chr5_2:592014-592033 | Msa0747770:CDS | 35.0% | |
| CAAGATGGTTCTTTACATAG+AGG | - | chr5_2:592056-592075 | None:intergenic | 35.0% | |
| CTCTATGTAAAGAACCATCT+TGG | + | chr5_2:592054-592073 | Msa0747770:CDS | 35.0% | |
| ATGATGTTTCGGCAAAGAAA+AGG | - | chr5_2:592104-592123 | None:intergenic | 35.0% | |
| ! | TGTACTTTTATGGCATGTGT+GGG | + | chr5_2:592192-592211 | Msa0747770:CDS | 35.0% |
| GGTTTAAGTGGCATTTAACA+TGG | + | chr5_2:592424-592443 | Msa0747770:intron | 35.0% | |
| TGATGTCTTCTTGATACTTC+GGG | - | chr5_2:592536-592555 | None:intergenic | 35.0% | |
| CAAGTGATGCTCATCTAATA+AGG | - | chr5_2:592700-592719 | None:intergenic | 35.0% | |
| CTTGCTTAAAATCTGTTCAC+TGG | + | chr5_2:592925-592944 | Msa0747770:intron | 35.0% | |
| ACAATGTTGGTCAAGTCAAT+TGG | - | chr5_2:592957-592976 | None:intergenic | 35.0% | |
| ! | CAACCAACATGATTTTCGAA+GGG | - | chr5_2:593099-593118 | None:intergenic | 35.0% |
| ! | TCAACCAACATGATTTTCGA+AGG | - | chr5_2:593100-593119 | None:intergenic | 35.0% |
| GAATGTGCATTTGACTATGT+TGG | + | chr5_2:593145-593164 | Msa0747770:intron | 35.0% | |
| ATGTGCATTTGACTATGTTG+GGG | + | chr5_2:593147-593166 | Msa0747770:intron | 35.0% | |
| AATATATCAAGAGTCAGGCA+AGG | - | chr5_2:593246-593265 | None:intergenic | 35.0% | |
| TATTACAGTCTTTGGATGAG+AGG | + | chr5_2:593266-593285 | Msa0747770:intron | 35.0% | |
| GGTTCCTTGAAGCTATTAAT+GGG | + | chr5_2:593308-593327 | Msa0747770:CDS | 35.0% | |
| CATACCCATTAATAGCTTCA+AGG | - | chr5_2:593315-593334 | None:intergenic | 35.0% | |
| !! | TCATTTTCTTTTTGAGGGTG+GGG | + | chr5_2:593361-593380 | Msa0747770:intron | 35.0% |
| ACTTTGTGATGGCATATTAC+AGG | + | chr5_2:593601-593620 | Msa0747770:intron | 35.0% | |
| CATTCTCAACACATAGTAAC+AGG | - | chr5_2:593782-593801 | None:intergenic | 35.0% | |
| AGCTGTTGTTGTGTAATTAC+AGG | + | chr5_2:593847-593866 | Msa0747770:intron | 35.0% | |
| TAATTACAGGTTCAAGCATG+CGG | + | chr5_2:593860-593879 | Msa0747770:intron | 35.0% | |
| ATTGGTATTAACATGGCATG+GGG | - | chr5_2:593908-593927 | None:intergenic | 35.0% | |
| CATTGGTATTAACATGGCAT+GGG | - | chr5_2:593909-593928 | None:intergenic | 35.0% | |
| GTACTCCATTGGTATTAACA+TGG | - | chr5_2:593915-593934 | None:intergenic | 35.0% | |
| ! | GAAATACAAGATGGACTCAA+GGG | - | chr5_2:593995-594014 | None:intergenic | 35.0% |
| ! | AGAAATACAAGATGGACTCA+AGG | - | chr5_2:593996-594015 | None:intergenic | 35.0% |
| AATTTCAAACCCATACTCTC+GGG | - | chr5_2:594034-594053 | None:intergenic | 35.0% | |
| CAATTTCAAACCCATACTCT+CGG | - | chr5_2:594035-594054 | None:intergenic | 35.0% | |
| GATGAATAATGATGGTTGGT+TGG | + | chr5_2:594096-594115 | Msa0747770:three_prime_UTR | 35.0% | |
| TTTCGTAAACAGATCTTACG+GGG | - | chr5_2:594132-594151 | None:intergenic | 35.0% | |
| GTTTCGTAAACAGATCTTAC+GGG | - | chr5_2:594133-594152 | None:intergenic | 35.0% | |
| TCCCATTATCTACAACCATA+CGG | - | chr5_2:594206-594225 | None:intergenic | 35.0% | |
| CAATTGTAAAGCAAACATGG+AGG | + | chr5_2:594405-594424 | Msa0747770:three_prime_UTR | 35.0% | |
| TGCTACTGATATGTATCTGC+AGG | + | chr5_2:590770-590789 | Msa0747770:exon | 40.0% | |
| AGCAGCAAGTAATATGCTTC+TGG | - | chr5_2:591337-591356 | None:intergenic | 40.0% | |
| TCTTCAAGAGCTATTGCAGT+TGG | + | chr5_2:591505-591524 | Msa0747770:intron | 40.0% | |
| CTTCAAGAGCTATTGCAGTT+GGG | + | chr5_2:591506-591525 | Msa0747770:intron | 40.0% | |
| !!! | GCTGAGGTGCTTAACTTTTT+TGG | + | chr5_2:591590-591609 | Msa0747770:CDS | 40.0% |
| !! | GCTTTGAAGCTATCTCTATC+TGG | + | chr5_2:591670-591689 | Msa0747770:intron | 40.0% |
| ! | ATTTTTCCTTCCCCACATCA+TGG | + | chr5_2:591811-591830 | Msa0747770:intron | 40.0% |
| ! | TTTTTCCTTCCCCACATCAT+GGG | + | chr5_2:591812-591831 | Msa0747770:intron | 40.0% |
| TAAAGTCATTTGGGAGAGAG+AGG | - | chr5_2:591955-591974 | None:intergenic | 40.0% | |
| ! | CTGTACTTTTATGGCATGTG+TGG | + | chr5_2:592191-592210 | Msa0747770:CDS | 40.0% |
| ! | GTACTTTTATGGCATGTGTG+GGG | + | chr5_2:592193-592212 | Msa0747770:CDS | 40.0% |
| TTGTGGTGATAGGAAATTCG+CGG | + | chr5_2:592320-592339 | Msa0747770:intron | 40.0% | |
| GCTTTGACTATATCTGACTC+CGG | - | chr5_2:592359-592378 | None:intergenic | 40.0% | |
| ATATAGTCAAAGCATGCCGA+AGG | + | chr5_2:592366-592385 | Msa0747770:CDS | 40.0% | |
| TATAGTCAAAGCATGCCGAA+GGG | + | chr5_2:592367-592386 | Msa0747770:CDS | 40.0% | |
| GTGGGATTGGATAATAATGC+AGG | - | chr5_2:592493-592512 | None:intergenic | 40.0% | |
| GATAAATTACTGGGTGGGAT+TGG | - | chr5_2:592506-592525 | None:intergenic | 40.0% | |
| AAAGCGGTAAAATGAGGAAC+TGG | - | chr5_2:592599-592618 | None:intergenic | 40.0% | |
| !! | TCCTCATTTTACCGCTTTTC+TGG | + | chr5_2:592601-592620 | Msa0747770:intron | 40.0% |
| !! | CCTCATTTTACCGCTTTTCT+GGG | + | chr5_2:592602-592621 | Msa0747770:intron | 40.0% |
| !! | TTTTTCGGTTCCCAGAAAAG+CGG | - | chr5_2:592615-592634 | None:intergenic | 40.0% |
| ! | GACAAGCAGACAAGCTTTTT+CGG | - | chr5_2:592630-592649 | None:intergenic | 40.0% |
| AATCTTCAATGCATGTACGG+TGG | + | chr5_2:592884-592903 | Msa0747770:intron | 40.0% | |
| TTGCCCTTCGAAAATCATGT+TGG | + | chr5_2:593093-593112 | Msa0747770:intron | 40.0% | |
| CGGTTCCTTGAAGCTATTAA+TGG | + | chr5_2:593307-593326 | Msa0747770:CDS | 40.0% | |
| GGTTTCTCAATCCTTCACTT+AGG | - | chr5_2:593635-593654 | None:intergenic | 40.0% | |
| GATTGAGAAACCTACATTGC+CGG | + | chr5_2:593643-593662 | Msa0747770:CDS | 40.0% | |
| AAATTAGTGACCGGCAATGT+AGG | - | chr5_2:593656-593675 | None:intergenic | 40.0% | |
| ! | TGCCGGTCACTAATTTTTGT+TGG | + | chr5_2:593660-593679 | Msa0747770:CDS | 40.0% |
| ! | GCCGGTCACTAATTTTTGTT+GGG | + | chr5_2:593661-593680 | Msa0747770:CDS | 40.0% |
| CCCCAACAAAAATTAGTGAC+CGG | - | chr5_2:593665-593684 | None:intergenic | 40.0% | |
| ! | CCGGTCACTAATTTTTGTTG+GGG | + | chr5_2:593662-593681 | Msa0747770:CDS | 40.0% |
| TATGTCTCCATATCACTCAG+AGG | + | chr5_2:593686-593705 | Msa0747770:CDS | 40.0% | |
| AATTACAGGTTCAAGCATGC+GGG | + | chr5_2:593861-593880 | Msa0747770:intron | 40.0% | |
| CCATTGGTATTAACATGGCA+TGG | - | chr5_2:593910-593929 | None:intergenic | 40.0% | |
| CCATGCCATGTTAATACCAA+TGG | + | chr5_2:593907-593926 | Msa0747770:CDS | 40.0% | |
| ! | ACCAATGGAGTACTTTCTCA+TGG | + | chr5_2:593922-593941 | Msa0747770:CDS | 40.0% |
| ! | CCAATGGAGTACTTTCTCAT+GGG | + | chr5_2:593923-593942 | Msa0747770:CDS | 40.0% |
| GAGTACTTTCTCATGGGATA+TGG | + | chr5_2:593929-593948 | Msa0747770:CDS | 40.0% | |
| AGCTCAGGAGAAATACAAGA+TGG | - | chr5_2:594004-594023 | None:intergenic | 40.0% | |
| !!! | CTTTTTTCACCCGAGAGTAT+GGG | + | chr5_2:594022-594041 | Msa0747770:CDS | 40.0% |
| TGCCGTATGGTTGTAGATAA+TGG | + | chr5_2:594201-594220 | Msa0747770:three_prime_UTR | 40.0% | |
| GCCGTATGGTTGTAGATAAT+GGG | + | chr5_2:594202-594221 | Msa0747770:three_prime_UTR | 40.0% | |
| TCTGTCTCTGTTGCTGTGTA+TGG | + | chr5_2:590819-590838 | Msa0747770:CDS | 45.0% | |
| CTGTCTCTGTTGCTGTGTAT+GGG | + | chr5_2:590820-590839 | Msa0747770:CDS | 45.0% | |
| TGTCTCTGTTGCTGTGTATG+GGG | + | chr5_2:590821-590840 | Msa0747770:CDS | 45.0% | |
| !! | TGATAAGAGCTGGTTTGTCC+TGG | - | chr5_2:590848-590867 | None:intergenic | 45.0% |
| TCAGGATAGGTGATAAGAGC+TGG | - | chr5_2:590858-590877 | None:intergenic | 45.0% | |
| GCAGAAGATGATAAGCAACC+AGG | - | chr5_2:591483-591502 | None:intergenic | 45.0% | |
| ! | CTTAGCGGATCAAATAGCTG+AGG | + | chr5_2:591574-591593 | Msa0747770:CDS | 45.0% |
| AGGGTTAGATCCCATGATGT+GGG | - | chr5_2:591825-591844 | None:intergenic | 45.0% | |
| ATGTGTATGGGAGTAACTGC+TGG | + | chr5_2:591880-591899 | Msa0747770:CDS | 45.0% | |
| TGTGTATGGGAGTAACTGCT+GGG | + | chr5_2:591881-591900 | Msa0747770:CDS | 45.0% | |
| ATTTGGGAGAGAGAGGAAGA+CGG | - | chr5_2:591948-591967 | None:intergenic | 45.0% | |
| AAGAACCATCTTGGTCTGAG+TGG | + | chr5_2:592063-592082 | Msa0747770:CDS | 45.0% | |
| TACAACCACTCAGACCAAGA+TGG | - | chr5_2:592071-592090 | None:intergenic | 45.0% | |
| GTCTGAGTGGTTGTACAACA+AGG | + | chr5_2:592076-592095 | Msa0747770:CDS | 45.0% | |
| !!! | GCTGAAGCGGTATTTTAGCA+AGG | + | chr5_2:592232-592251 | Msa0747770:CDS | 45.0% |
| ATGTAGGGACTGGGTTTAAG+TGG | + | chr5_2:592412-592431 | Msa0747770:intron | 45.0% | |
| ACGAATAGATTTGCCCACCA+TGG | + | chr5_2:592451-592470 | Msa0747770:intron | 45.0% | |
| TATGAGCATCTGACCATGGT+GGG | - | chr5_2:592467-592486 | None:intergenic | 45.0% | |
| ATATGAGCATCTGACCATGG+TGG | - | chr5_2:592468-592487 | None:intergenic | 45.0% | |
| GACATATGAGCATCTGACCA+TGG | - | chr5_2:592471-592490 | None:intergenic | 45.0% | |
| CCCAGAAAAGCGGTAAAATG+AGG | - | chr5_2:592605-592624 | None:intergenic | 45.0% | |
| AGCTTCAGAAAACCAGCAAC+AGG | - | chr5_2:593216-593235 | None:intergenic | 45.0% | |
| AGAGGCAAAGCTTGAATGTG+TGG | + | chr5_2:593284-593303 | Msa0747770:CDS | 45.0% | |
| CTCAATCCTTCACTTAGGTC+AGG | - | chr5_2:593630-593649 | None:intergenic | 45.0% | |
| ACGATTCAGTGCCTTAGTTG+AGG | + | chr5_2:593737-593756 | Msa0747770:CDS | 45.0% | |
| !! | CCCATGAGAAAGTACTCCAT+TGG | - | chr5_2:593926-593945 | None:intergenic | 45.0% |
| TCATGGGATATGGTCTGTAC+AGG | + | chr5_2:593939-593958 | Msa0747770:CDS | 45.0% | |
| ATGGACTCAAGGGACTTCTT+GGG | - | chr5_2:593985-594004 | None:intergenic | 45.0% | |
| !!! | GCTTTTTTCACCCGAGAGTA+TGG | + | chr5_2:594021-594040 | Msa0747770:CDS | 45.0% |
| !! | ATGAAATAGGGAGTGCCGTA+TGG | + | chr5_2:594188-594207 | Msa0747770:three_prime_UTR | 45.0% |
| ATCAGACGTCTCCTGCTTTC+AGG | + | chr5_2:591297-591316 | Msa0747770:intron | 50.0% | |
| TCAGACGTCTCCTGCTTTCA+GGG | + | chr5_2:591298-591317 | Msa0747770:intron | 50.0% | |
| TAGATCCCATGATGTGGGGA+AGG | - | chr5_2:591820-591839 | None:intergenic | 50.0% | |
| GGGTTAGATCCCATGATGTG+GGG | - | chr5_2:591824-591843 | None:intergenic | 50.0% | |
| CAGGGTTAGATCCCATGATG+TGG | - | chr5_2:591826-591845 | None:intergenic | 50.0% | |
| GTGTATGGGAGTAACTGCTG+GGG | + | chr5_2:591882-591901 | Msa0747770:CDS | 50.0% | |
| ! | CTTTTATGGCATGTGTGGGG+TGG | + | chr5_2:592196-592215 | Msa0747770:CDS | 50.0% |
| TGGTGATAGGAAATTCGCGG+TGG | + | chr5_2:592323-592342 | Msa0747770:intron | 50.0% | |
| TCGCGGTGGTACTCAATTTC+CGG | + | chr5_2:592337-592356 | Msa0747770:CDS | 50.0% | |
| CCAGCAACAGGTAAAACCCA+GGG | - | chr5_2:593204-593223 | None:intergenic | 50.0% | |
| ACCAGCAACAGGTAAAACCC+AGG | - | chr5_2:593205-593224 | None:intergenic | 50.0% | |
| GGCAAAGCTTGAATGTGTGG+CGG | + | chr5_2:593287-593306 | Msa0747770:CDS | 50.0% | |
| !! | TTTTGAGGGTGGGGTGTTTC+AGG | + | chr5_2:593370-593389 | Msa0747770:intron | 50.0% |
| AGGAGACCTGACCTAAGTGA+AGG | + | chr5_2:593621-593640 | Msa0747770:intron | 50.0% | |
| ! | TGGAGTGCCTCTGAGTGATA+TGG | - | chr5_2:593696-593715 | None:intergenic | 50.0% |
| ATGCGGGTCAATGGTAACAG+AGG | + | chr5_2:593877-593896 | Msa0747770:CDS | 50.0% | |
| ! | GATGGACTCAAGGGACTTCT+TGG | - | chr5_2:593986-594005 | None:intergenic | 50.0% |
| CTCTCGGGTGAAAAAAGCTC+AGG | - | chr5_2:594019-594038 | None:intergenic | 50.0% | |
| TGTTGCTGTGTATGGGGACC+AGG | + | chr5_2:590827-590846 | Msa0747770:CDS | 55.0% | |
| CAGACGTCTCCTGCTTTCAG+GGG | + | chr5_2:591299-591318 | Msa0747770:intron | 55.0% | |
| CATTAGTCCACCTGGGCATG+AGG | + | chr5_2:591378-591397 | Msa0747770:CDS | 55.0% | |
| AAGCTACAGACCTCATGCCC+AGG | - | chr5_2:591391-591410 | None:intergenic | 55.0% | |
| TGGCATGTGTGGGGTGGTAA+AGG | + | chr5_2:592202-592221 | Msa0747770:CDS | 55.0% | |
| GCAACAGGTAAAACCCAGGG+CGG | - | chr5_2:593201-593220 | None:intergenic | 55.0% | |
| ! | CCCTGGGTTTTACCTGTTGC+TGG | + | chr5_2:593201-593220 | Msa0747770:intron | 55.0% |
| GGTTCAAGCATGCGGGTCAA+TGG | + | chr5_2:593868-593887 | Msa0747770:intron | 55.0% | |
| ATGGTCTGTACAGGCCATCC+AGG | + | chr5_2:593948-593967 | Msa0747770:CDS | 55.0% | |
| TCTTGGGCTGACACTGTTCC+TGG | - | chr5_2:593969-593988 | None:intergenic | 55.0% | |
| CTACAGACCTCATGCCCAGG+TGG | - | chr5_2:591388-591407 | None:intergenic | 60.0% | |
| ATCGTGCTAAACGCCGCCCT+GGG | + | chr5_2:593185-593204 | Msa0747770:intron | 60.0% | |
| GGGCTGACACTGTTCCTGGA+TGG | - | chr5_2:593965-593984 | None:intergenic | 60.0% | |
| GATCGTGCTAAACGCCGCCC+TGG | + | chr5_2:593184-593203 | Msa0747770:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 590741 | 594572 | 590741 | ID=Msa0747770;Name=Msa0747770 |
| chr5_2 | mRNA | 590741 | 594572 | 590741 | ID=Msa0747770-mRNA-1;Parent=Msa0747770;Name=Msa0747770-mRNA-1;_AED=0.25;_eAED=0.25;_QI=39|1|1|1|1|1|10|482|331 |
| chr5_2 | exon | 590741 | 590891 | 590741 | ID=Msa0747770-mRNA-1:exon:138;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 591302 | 591399 | 591302 | ID=Msa0747770-mRNA-1:exon:139;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 591524 | 591612 | 591524 | ID=Msa0747770-mRNA-1:exon:140;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 591867 | 591927 | 591867 | ID=Msa0747770-mRNA-1:exon:141;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 592011 | 592097 | 592011 | ID=Msa0747770-mRNA-1:exon:142;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 592176 | 592253 | 592176 | ID=Msa0747770-mRNA-1:exon:143;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 592332 | 592388 | 592332 | ID=Msa0747770-mRNA-1:exon:144;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 593274 | 593329 | 593274 | ID=Msa0747770-mRNA-1:exon:145;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 593623 | 593758 | 593623 | ID=Msa0747770-mRNA-1:exon:146;Parent=Msa0747770-mRNA-1 |
| chr5_2 | exon | 593869 | 594572 | 593869 | ID=Msa0747770-mRNA-1:exon:147;Parent=Msa0747770-mRNA-1 |
| chr5_2 | five_prime_UTR | 590741 | 590779 | 590741 | ID=Msa0747770-mRNA-1:five_prime_utr;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 590780 | 590891 | 590780 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 591302 | 591399 | 591302 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 591524 | 591612 | 591524 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 591867 | 591927 | 591867 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 592011 | 592097 | 592011 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 592176 | 592253 | 592176 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 592332 | 592388 | 592332 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 593274 | 593329 | 593274 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 593623 | 593758 | 593623 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | CDS | 593869 | 594090 | 593869 | ID=Msa0747770-mRNA-1:cds;Parent=Msa0747770-mRNA-1 |
| chr5_2 | three_prime_UTR | 594091 | 594572 | 594091 | ID=Msa0747770-mRNA-1:three_prime_utr;Parent=Msa0747770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
