Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748680 | sp|P48001|KNAT4_ARATH | 75.912 | 274 | 44 | 4 | 74 | 330 | 123 | 391 | 3.16e-145 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748680 | I3SDT1 | 94.220 | 346 | 3 | 3 | 1 | 333 | 1 | 342 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0748680 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038020 | Msa0748680 | 0.838369 | 2.996236e-57 | -8.615850e-47 |
| Msa0085720 | Msa0748680 | 0.819344 | 1.220291e-52 | -8.615850e-47 |
| Msa0748680 | Msa1215890 | 0.955246 | 4.710203e-113 | -8.615850e-47 |
| Msa0132240 | Msa0748680 | 0.818329 | 2.075209e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748680 | MtrunA17_Chr4g0065241 | 94.509 | 346 | 1 | 4 | 1 | 333 | 1 | 341 | 0.0 | 659 |
| Msa0748680 | MtrunA17_Chr2g0305101 | 70.652 | 368 | 71 | 8 | 1 | 333 | 1 | 366 | 4.46e-176 | 492 |
| Msa0748680 | MtrunA17_Chr1g0149651 | 75.746 | 268 | 48 | 4 | 70 | 321 | 169 | 435 | 4.70e-144 | 414 |
| Msa0748680 | MtrunA17_Chr3g0137241 | 74.254 | 268 | 48 | 4 | 73 | 321 | 105 | 370 | 2.42e-139 | 399 |
| Msa0748680 | MtrunA17_Chr5g0398181 | 64.130 | 276 | 82 | 3 | 72 | 330 | 25 | 300 | 3.79e-120 | 348 |
| Msa0748680 | MtrunA17_Chr1g0192791 | 31.967 | 244 | 142 | 4 | 72 | 306 | 17 | 245 | 1.59e-25 | 103 |
| Msa0748680 | MtrunA17_Chr2g0289201 | 31.818 | 242 | 133 | 6 | 75 | 306 | 118 | 337 | 1.32e-24 | 102 |
| Msa0748680 | MtrunA17_Chr1g0151961 | 31.873 | 251 | 141 | 6 | 65 | 306 | 113 | 342 | 2.04e-22 | 96.7 |
| Msa0748680 | MtrunA17_Chr5g0413201 | 31.148 | 244 | 134 | 6 | 75 | 306 | 73 | 294 | 1.58e-20 | 90.5 |
| Msa0748680 | MtrunA17_Chr5g0439391 | 31.452 | 248 | 119 | 8 | 77 | 306 | 49 | 263 | 1.69e-17 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748680 | AT5G11060.1 | 75.912 | 274 | 44 | 4 | 74 | 330 | 123 | 391 | 3.21e-146 | 418 |
| Msa0748680 | AT5G25220.1 | 75.735 | 272 | 44 | 3 | 74 | 328 | 159 | 425 | 6.74e-146 | 418 |
| Msa0748680 | AT5G25220.2 | 75.849 | 265 | 42 | 3 | 74 | 321 | 159 | 418 | 2.42e-142 | 409 |
| Msa0748680 | AT4G32040.1 | 60.909 | 330 | 99 | 10 | 22 | 324 | 55 | 381 | 4.65e-124 | 361 |
| Msa0748680 | AT4G32040.2 | 61.468 | 327 | 96 | 10 | 22 | 321 | 55 | 378 | 8.83e-124 | 360 |
| Msa0748680 | AT1G62990.1 | 61.011 | 277 | 88 | 4 | 62 | 321 | 17 | 290 | 1.73e-116 | 338 |
| Msa0748680 | AT1G70510.2 | 29.839 | 248 | 142 | 7 | 71 | 306 | 66 | 293 | 2.31e-25 | 104 |
| Msa0748680 | AT1G70510.1 | 30.364 | 247 | 138 | 8 | 71 | 306 | 66 | 289 | 1.15e-24 | 102 |
| Msa0748680 | AT1G23380.1 | 32.526 | 289 | 136 | 12 | 36 | 306 | 58 | 305 | 2.05e-24 | 101 |
| Msa0748680 | AT4G08150.1 | 33.465 | 254 | 119 | 8 | 75 | 306 | 135 | 360 | 2.19e-24 | 102 |
| Msa0748680 | AT1G23380.2 | 32.302 | 291 | 136 | 13 | 36 | 306 | 58 | 307 | 1.34e-22 | 96.7 |
| Msa0748680 | AT1G62360.1 | 33.333 | 243 | 130 | 6 | 75 | 306 | 122 | 343 | 2.10e-21 | 94.4 |
Find 105 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAGCTTGATCACTTTA+TGG | 0.159839 | 5_2:-1927471 | Msa0748680:intron |
| TTCTGTTGGAATTGGAAATA+TGG | 0.205132 | 5_2:-1927498 | Msa0748680:CDS |
| CTACCTCTTGCGCTTGGTTT+TGG | 0.213600 | 5_2:+1922172 | None:intergenic |
| CGCGTTGATCTATAAATAAA+TGG | 0.223815 | 5_2:+1928055 | None:intergenic |
| CTCTATCTATTAGAATTAAT+TGG | 0.263022 | 5_2:-1921659 | Msa0748680:three_prime_UTR |
| AAATATTCTTCTGTTGGAAT+TGG | 0.277819 | 5_2:-1927506 | Msa0748680:CDS |
| GAATACAAAGCAGAGATATT+AGG | 0.306187 | 5_2:-1927647 | Msa0748680:CDS |
| GAGAAAATTAAGAAGAGAAT+AGG | 0.318203 | 5_2:+1927924 | None:intergenic |
| AGAAAATTAAGAAGAGAATA+GGG | 0.334294 | 5_2:+1927925 | None:intergenic |
| AATTAAAGCAAATAAATAAC+TGG | 0.339856 | 5_2:-1922250 | Msa0748680:CDS |
| GGTGGCAATCACATTCTAAA+TGG | 0.351052 | 5_2:-1922430 | Msa0748680:CDS |
| ATCATTTGAAATGAATGATA+AGG | 0.358915 | 5_2:-1921506 | Msa0748680:three_prime_UTR |
| TTTCACAATTGTTGTCATTC+CGG | 0.359823 | 5_2:+1927684 | None:intergenic |
| GCTAGATTGGTGCAGGAAAC+AGG | 0.372105 | 5_2:-1922278 | Msa0748680:CDS |
| GGTCTTTGATGGAACGAGTT+AGG | 0.372149 | 5_2:-1922577 | Msa0748680:CDS |
| TAATGGAATACGGATGTAGA+AGG | 0.377369 | 5_2:-1921823 | Msa0748680:three_prime_UTR |
| GCTCATGAATGTGAAAATAA+TGG | 0.383442 | 5_2:-1921840 | Msa0748680:three_prime_UTR |
| AACGAAGGAAGCAGCCTTGA+TGG | 0.386285 | 5_2:-1922647 | Msa0748680:CDS |
| TCAACAGAATTTCATGCAAA+TGG | 0.400557 | 5_2:-1927744 | Msa0748680:CDS |
| GGAAAATTGTGATGAGTAAG+AGG | 0.404300 | 5_2:+1928112 | None:intergenic |
| AGAGACTGAAAGGTCTTTGA+TGG | 0.405462 | 5_2:-1922588 | Msa0748680:CDS |
| TCCTTGCATTGTTAAATATG+AGG | 0.412707 | 5_2:-1921741 | Msa0748680:three_prime_UTR |
| GGCGTCGATACTCTTGGCTT+TGG | 0.416116 | 5_2:-1922626 | Msa0748680:CDS |
| AGAAAATTCAACGGTGGGAT+TGG | 0.417881 | 5_2:+1928079 | None:intergenic |
| TGGAGGCAGTGATGGCTTGT+TGG | 0.423089 | 5_2:-1924512 | Msa0748680:CDS |
| GCTGGAAAGCTATTTCTTGT+TGG | 0.428428 | 5_2:+1927843 | None:intergenic |
| GGAGGCAGTGATGGCTTGTT+GGG | 0.429166 | 5_2:-1924511 | Msa0748680:CDS |
| TACATAGAATTAAATACAGC+AGG | 0.434683 | 5_2:-1921547 | Msa0748680:three_prime_UTR |
| ATTATGAGCAGGTGTATCTT+CGG | 0.435057 | 5_2:-1922738 | Msa0748680:intron |
| ATTCTACGAAAGAGAAGAGC+TGG | 0.436569 | 5_2:-1922491 | Msa0748680:CDS |
| AAGAAGAAGAAGATGAAGAA+AGG | 0.437288 | 5_2:-1927811 | Msa0748680:CDS |
| CTTGATGGCGTCGATACTCT+TGG | 0.437382 | 5_2:-1922632 | Msa0748680:CDS |
| CAGTCTCTGCAAAGCTTGAC+AGG | 0.437852 | 5_2:-1924480 | Msa0748680:intron |
| CATAAAGTGATCAAGCTCCT+TGG | 0.444189 | 5_2:+1927472 | None:intergenic |
| ATCCTTGGAAGCTGATCAAC+CGG | 0.446297 | 5_2:+1927566 | None:intergenic |
| ATTGCCACCAAGCTTTCAAA+AGG | 0.450033 | 5_2:+1922444 | None:intergenic |
| ATGATATCTTACAGTTGGAT+AGG | 0.451403 | 5_2:+1922406 | None:intergenic |
| GGAGGAAGATAAGGCTAGAT+TGG | 0.457401 | 5_2:-1922291 | Msa0748680:CDS |
| TGCTGCTTGATATCTGATAT+CGG | 0.461258 | 5_2:-1921691 | Msa0748680:three_prime_UTR |
| AGAAGAAGAAGATGAAGAAA+GGG | 0.462012 | 5_2:-1927810 | Msa0748680:CDS |
| GATTGATGCTCAGCTTCAAC+AGG | 0.462130 | 5_2:-1927546 | Msa0748680:CDS |
| TCAATCAAAGGAAAAGGAAC+TGG | 0.471396 | 5_2:-1922223 | Msa0748680:CDS |
| AGAAGAGCTGGGAAACTCCC+TGG | 0.471897 | 5_2:-1922479 | Msa0748680:CDS |
| GTATCTTCGGGTGAAGGAAC+AGG | 0.474653 | 5_2:-1922725 | Msa0748680:CDS |
| ATAAAGTGATCAAGCTCCTT+GGG | 0.475708 | 5_2:+1927473 | None:intergenic |
| AAAAGGGATGTGGTGTCCCC+AGG | 0.478534 | 5_2:+1922461 | None:intergenic |
| ATATCTGATATCGGAGGATA+AGG | 0.492116 | 5_2:-1921682 | Msa0748680:three_prime_UTR |
| TTATGAGCAGGTGTATCTTC+GGG | 0.502400 | 5_2:-1922737 | Msa0748680:intron |
| GTCAGACGATGAAGATGAGC+AGG | 0.503765 | 5_2:-1922693 | Msa0748680:CDS |
| GCGTTGATCTATAAATAAAT+GGG | 0.507845 | 5_2:+1928056 | None:intergenic |
| TCAGTCTCTGTGGGGACTAG+AGG | 0.508899 | 5_2:+1922602 | None:intergenic |
| CACCGGTTGATCAGCTTCCA+AGG | 0.508909 | 5_2:-1927568 | Msa0748680:CDS |
| AAGATGAAGAAAGGGCATCC+TGG | 0.510979 | 5_2:-1927802 | Msa0748680:CDS |
| GAAGAGCTGGGAAACTCCCT+GGG | 0.514675 | 5_2:-1922478 | Msa0748680:CDS |
| TGAAGCTGAGCATCAATCCT+TGG | 0.515964 | 5_2:+1927551 | None:intergenic |
| TAAGGAAATGACTTATTGGA+AGG | 0.516022 | 5_2:+1928026 | None:intergenic |
| ATGGTACTACCTCTTGCGCT+TGG | 0.518902 | 5_2:+1922166 | None:intergenic |
| ATTAGAATTAATTGGTAGCA+TGG | 0.523205 | 5_2:-1921651 | Msa0748680:three_prime_UTR |
| GGTTTATCAATCAAAGGAAA+AGG | 0.523630 | 5_2:-1922229 | Msa0748680:CDS |
| TCATGCCATGGAGGCAGTGA+TGG | 0.523998 | 5_2:-1924520 | Msa0748680:CDS |
| GCTCCAAAACCAAGCGCAAG+AGG | 0.527063 | 5_2:-1922175 | Msa0748680:intron |
| TGATATCTTACAGTTGGATA+GGG | 0.527756 | 5_2:+1922407 | None:intergenic |
| AATGGAATACGGATGTAGAA+GGG | 0.530028 | 5_2:-1921822 | Msa0748680:three_prime_UTR |
| AGATAAGGCTAGATTGGTGC+AGG | 0.536981 | 5_2:-1922285 | Msa0748680:CDS |
| CTTCTTCTTCTGTGAAACGC+TGG | 0.539396 | 5_2:+1927825 | None:intergenic |
| GAATGACAACAATTGTGAAA+CGG | 0.541672 | 5_2:-1927681 | Msa0748680:CDS |
| TTTGGAGCTACTAGAGGATG+GGG | 0.544084 | 5_2:+1922190 | None:intergenic |
| AATGTGAAAATAATGGAATA+CGG | 0.544166 | 5_2:-1921833 | Msa0748680:three_prime_UTR |
| AAAGACCTTTCAGTCTCTGT+GGG | 0.544199 | 5_2:+1922593 | None:intergenic |
| AAAGCATGGATCGGAACCAC+CGG | 0.544529 | 5_2:-1927703 | Msa0748680:CDS |
| GTGTCTCAGAATTGCGACAC+CGG | 0.547847 | 5_2:-1927585 | Msa0748680:CDS |
| CGGTGGGATTGGTGATAACG+TGG | 0.548286 | 5_2:+1928090 | None:intergenic |
| CACAATTGTTGTCATTCCGG+TGG | 0.548848 | 5_2:+1927687 | None:intergenic |
| ACCTCATATTTAACAATGCA+AGG | 0.554022 | 5_2:+1921740 | None:intergenic |
| ACAAGCCATCACTGCCTCCA+TGG | 0.554613 | 5_2:+1924515 | None:intergenic |
| GCAGGTGTATCTTCGGGTGA+AGG | 0.559026 | 5_2:-1922731 | Msa0748680:intron |
| ATAACTGGTTTATCAATCAA+AGG | 0.563797 | 5_2:-1922235 | Msa0748680:CDS |
| ATGGGAGAAAATTCAACGGT+GGG | 0.572326 | 5_2:+1928074 | None:intergenic |
| CCAAGCTTTCAAAAGGGATG+TGG | 0.573990 | 5_2:+1922451 | None:intergenic |
| AAAGGGATGTGGTGTCCCCA+GGG | 0.576707 | 5_2:+1922462 | None:intergenic |
| TGAACTCAAACAAGGTTACA+AGG | 0.578875 | 5_2:-1922540 | Msa0748680:CDS |
| TTCTACGAAAGAGAAGAGCT+GGG | 0.579028 | 5_2:-1922490 | Msa0748680:CDS |
| ACATGTCCGTGTTCATGCCA+TGG | 0.585181 | 5_2:-1924532 | Msa0748680:CDS |
| TCATGCAAATGGAACCAGAA+AGG | 0.585338 | 5_2:-1927733 | Msa0748680:CDS |
| TAGTCCCCACAGAGACTGAA+AGG | 0.587654 | 5_2:-1922598 | Msa0748680:CDS |
| GCAAATGGAACCAGAAAGGA+GGG | 0.590244 | 5_2:-1927729 | Msa0748680:CDS |
| CAAAGACCTTTCAGTCTCTG+TGG | 0.597386 | 5_2:+1922592 | None:intergenic |
| GATAATAATTGATCATAGAG+TGG | 0.604741 | 5_2:+1927620 | None:intergenic |
| TGCAAATGGAACCAGAAAGG+AGG | 0.604949 | 5_2:-1927730 | Msa0748680:CDS |
| CAAGAGTATCGACGCCATCA+AGG | 0.607066 | 5_2:+1922633 | None:intergenic |
| TTGCCACCAAGCTTTCAAAA+GGG | 0.608799 | 5_2:+1922445 | None:intergenic |
| ATGGAATACGGATGTAGAAG+GGG | 0.610725 | 5_2:-1921821 | Msa0748680:three_prime_UTR |
| AATTGGAAATATGGATCCCA+AGG | 0.614560 | 5_2:-1927489 | Msa0748680:CDS |
| CTGCCTCCATGGCATGAACA+CGG | 0.617572 | 5_2:+1924526 | None:intergenic |
| AATGGGAGAAAATTCAACGG+TGG | 0.645147 | 5_2:+1928073 | None:intergenic |
| AACGCTAGGTTATACAACGA+AGG | 0.654984 | 5_2:-1922662 | Msa0748680:CDS |
| TTGAAGCATGAACTCAAACA+AGG | 0.656993 | 5_2:-1922548 | Msa0748680:CDS |
| AGCAGGCAGAGAGTAACGCT+AGG | 0.662764 | 5_2:-1922676 | Msa0748680:CDS |
| ATAAATGGGAGAAAATTCAA+CGG | 0.679735 | 5_2:+1928070 | None:intergenic |
| ACATAGAATTAAATACAGCA+GGG | 0.684339 | 5_2:-1921546 | Msa0748680:three_prime_UTR |
| TGTCCGTGTTCATGCCATGG+AGG | 0.690107 | 5_2:-1924529 | Msa0748680:CDS |
| TGCTTGATATCTGATATCGG+AGG | 0.696705 | 5_2:-1921688 | Msa0748680:three_prime_UTR |
| GGTGGGATTGGTGATAACGT+GGG | 0.701915 | 5_2:+1928091 | None:intergenic |
| AAGACCTTTCAGTCTCTGTG+GGG | 0.730543 | 5_2:+1922594 | None:intergenic |
| AAGAGCTGGGAAACTCCCTG+GGG | 0.766388 | 5_2:-1922477 | Msa0748680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAGACATTATTTTA+TGG | - | chr5_2:1922427-1922446 | Msa0748680:CDS | 10.0% |
| !! | TAAAAACAAACATAATAAAA+TGG | - | chr5_2:1922502-1922521 | Msa0748680:CDS | 10.0% |
| !! | CATTTAAATTTATAATATGT+AGG | + | chr5_2:1922634-1922653 | None:intergenic | 10.0% |
| !! | CTACATATTATAAATTTAAA+TGG | - | chr5_2:1922632-1922651 | Msa0748680:CDS | 10.0% |
| !! | AAAAAATTGACATATTTATA+GGG | + | chr5_2:1922915-1922934 | None:intergenic | 10.0% |
| !!! | AAAAATTCTAATTTTTTTTC+AGG | + | chr5_2:1923079-1923098 | None:intergenic | 10.0% |
| !!! | TATAATATTTTGAATTTTTC+TGG | - | chr5_2:1923205-1923224 | Msa0748680:intron | 10.0% |
| !! | TATTCATAATAGATTATTAT+AGG | - | chr5_2:1924037-1924056 | Msa0748680:intron | 10.0% |
| !!! | AAAATTTTTTATCTTGAAAA+TGG | - | chr5_2:1924098-1924117 | Msa0748680:intron | 10.0% |
| !! | AAATAATGTTGTATTTAAAA+AGG | - | chr5_2:1926316-1926335 | Msa0748680:intron | 10.0% |
| !!! | TTAGTCATATAAAATTTTAA+TGG | + | chr5_2:1926547-1926566 | None:intergenic | 10.0% |
| !! | AATTATAAACATTAAATGTA+CGG | + | chr5_2:1926641-1926660 | None:intergenic | 10.0% |
| !!! | ATATATATGAATTGTTTTAT+AGG | - | chr5_2:1927305-1927324 | Msa0748680:intron | 10.0% |
| !!! | TTTCTAAGATATTTTATGAA+AGG | - | chr5_2:1922533-1922552 | Msa0748680:CDS | 15.0% |
| !! | GACTATTTAACAATTAAATA+AGG | - | chr5_2:1922790-1922809 | Msa0748680:intron | 15.0% |
| !! | TTTAACAATTAAATAAGGAT+AGG | - | chr5_2:1922795-1922814 | Msa0748680:intron | 15.0% |
| !!! | TGTGTAATTTTTTTTATTGA+GGG | - | chr5_2:1922844-1922863 | Msa0748680:intron | 15.0% |
| !!! | TATTCTGTGTTATTATTATT+AGG | - | chr5_2:1922871-1922890 | Msa0748680:intron | 15.0% |
| !!! | ATTCTGTGTTATTATTATTA+GGG | - | chr5_2:1922872-1922891 | Msa0748680:intron | 15.0% |
| !! | CAAAAAATTGACATATTTAT+AGG | + | chr5_2:1922916-1922935 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | chr5_2:1922974-1922993 | None:intergenic | 15.0% |
| !!! | CATAAATTAAGTTGAAAATA+GGG | + | chr5_2:1923005-1923024 | None:intergenic | 15.0% |
| !!! | ACATAAATTAAGTTGAAAAT+AGG | + | chr5_2:1923006-1923025 | None:intergenic | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | - | chr5_2:1923289-1923308 | Msa0748680:intron | 15.0% |
| !! | GAAAAGTTAACATATTTATA+GGG | - | chr5_2:1923349-1923368 | Msa0748680:intron | 15.0% |
| !!! | ATTTGTTAATGATTCAAAAA+AGG | + | chr5_2:1924184-1924203 | None:intergenic | 15.0% |
| !! | AAAAAAAACTCACTAAAAAA+AGG | + | chr5_2:1924287-1924306 | None:intergenic | 15.0% |
| !! | TCAAAAAAAAAAAATGTTTC+TGG | - | chr5_2:1924752-1924771 | Msa0748680:intron | 15.0% |
| !! | ATTCAAATTCAAATAATGAT+CGG | - | chr5_2:1924783-1924802 | Msa0748680:intron | 15.0% |
| !! | AACCCTAAATAAATATTATT+TGG | - | chr5_2:1924845-1924864 | Msa0748680:intron | 15.0% |
| !! | GTCCAAATAATATTTATTTA+GGG | + | chr5_2:1924850-1924869 | None:intergenic | 15.0% |
| !! | TGTCCAAATAATATTTATTT+AGG | + | chr5_2:1924851-1924870 | None:intergenic | 15.0% |
| !!! | TTATTATGATTAGTTGTATA+GGG | - | chr5_2:1925252-1925271 | Msa0748680:intron | 15.0% |
| !! | AAAAATAATAAACAATCCTT+TGG | + | chr5_2:1926058-1926077 | None:intergenic | 15.0% |
| !! | CTAAAATAATCCATATAAAA+TGG | + | chr5_2:1926438-1926457 | None:intergenic | 15.0% |
| !!! | TTTTATATGGATTATTTTAG+AGG | - | chr5_2:1926438-1926457 | Msa0748680:intron | 15.0% |
| !! | TCTTATAAACTACATTATTA+TGG | - | chr5_2:1926508-1926527 | Msa0748680:intron | 15.0% |
| !! | AAAGTTCTTCAAATAAAAAA+GGG | + | chr5_2:1926612-1926631 | None:intergenic | 15.0% |
| !! | AAAAGTTCTTCAAATAAAAA+AGG | + | chr5_2:1926613-1926632 | None:intergenic | 15.0% |
| !! | AATTAAAGCAAATAAATAAC+TGG | - | chr5_2:1927367-1927386 | Msa0748680:intron | 15.0% |
| !! | AGAAAATTAAGAAGAGAATA+GGG | + | chr5_2:1921695-1921714 | None:intergenic | 20.0% |
| !! | TCTAACAAGACAATAAATAA+TGG | - | chr5_2:1922190-1922209 | Msa0748680:CDS | 20.0% |
| !! | ATGGCAAAAGTTATTAAAAT+TGG | - | chr5_2:1922209-1922228 | Msa0748680:CDS | 20.0% |
| !! | TTACTATGTCTCTAAATTTA+TGG | - | chr5_2:1922253-1922272 | Msa0748680:CDS | 20.0% |
| !! | TATCTTTACAAATACGTAAT+TGG | + | chr5_2:1922479-1922498 | None:intergenic | 20.0% |
| !! | AATCTCAAATATTAAAAGAG+TGG | + | chr5_2:1922583-1922602 | None:intergenic | 20.0% |
| !! | CATAATTTAGTGCAATAAAT+TGG | + | chr5_2:1922606-1922625 | None:intergenic | 20.0% |
| !!! | TAAATGGATAAAAGAGTATT+TGG | - | chr5_2:1922648-1922667 | Msa0748680:CDS | 20.0% |
| !!! | CTGTGTAATTTTTTTTATTG+AGG | - | chr5_2:1922843-1922862 | Msa0748680:intron | 20.0% |
| !!! | ATTAGGGTTAAATATGTTTT+TGG | - | chr5_2:1922888-1922907 | Msa0748680:intron | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr5_2:1922975-1922994 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr5_2:1922978-1922997 | Msa0748680:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr5_2:1923257-1923276 | Msa0748680:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr5_2:1923258-1923277 | Msa0748680:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | + | chr5_2:1923285-1923304 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | - | chr5_2:1923288-1923307 | Msa0748680:intron | 20.0% |
| !!! | AAGTTGAAAGAAAATTTTAG+AGG | - | chr5_2:1923317-1923336 | Msa0748680:intron | 20.0% |
| !!! | AGTTGAAAGAAAATTTTAGA+GGG | - | chr5_2:1923318-1923337 | Msa0748680:intron | 20.0% |
| !! | CGAAAAGTTAACATATTTAT+AGG | - | chr5_2:1923348-1923367 | Msa0748680:intron | 20.0% |
| !!! | ATAAGGGTTAAATATGTTTT+TGG | + | chr5_2:1923376-1923395 | None:intergenic | 20.0% |
| !! | AAAAAGAGAGAAAATAGTAA+AGG | + | chr5_2:1923442-1923461 | None:intergenic | 20.0% |
| !! | TAGTACAAATAGAAGATTAT+GGG | - | chr5_2:1923523-1923542 | Msa0748680:intron | 20.0% |
| !!! | CAACTTTTATTATTTTCTGA+TGG | - | chr5_2:1923636-1923655 | Msa0748680:intron | 20.0% |
| !!! | TGATAATAGTTAATTTGCTT+TGG | - | chr5_2:1924617-1924636 | Msa0748680:intron | 20.0% |
| !! | ATTAAATCACACTAAAAAAG+AGG | + | chr5_2:1924686-1924705 | None:intergenic | 20.0% |
| !! | TAAATAATGCCTCAATTATT+TGG | + | chr5_2:1924969-1924988 | None:intergenic | 20.0% |
| !!! | GTTATTATGATTAGTTGTAT+AGG | - | chr5_2:1925251-1925270 | Msa0748680:intron | 20.0% |
| !! | CATACTAGTTATATAATAGA+AGG | - | chr5_2:1926121-1926140 | Msa0748680:intron | 20.0% |
| !!! | AATTTGTCTCATTTTGTATT+GGG | - | chr5_2:1926356-1926375 | Msa0748680:intron | 20.0% |
| !! | ATCCATATAAAATGGAAATA+TGG | + | chr5_2:1926430-1926449 | None:intergenic | 20.0% |
| !!! | TGAAAACTTTTTACAAAGAA+TGG | + | chr5_2:1926475-1926494 | None:intergenic | 20.0% |
| !! | TATAAACTACATTATTATGG+AGG | - | chr5_2:1926511-1926530 | Msa0748680:intron | 20.0% |
| !!! | TATATGAATTGTTTTATAGG+AGG | - | chr5_2:1927308-1927327 | Msa0748680:intron | 20.0% |
| !! | AACTAACATAAAATGGTTTA+TGG | + | chr5_2:1927473-1927492 | None:intergenic | 20.0% |
| !! | AAGTCATAACTAACATAAAA+TGG | + | chr5_2:1927480-1927499 | None:intergenic | 20.0% |
| !!! | AATGTGAAAATAATGGAATA+CGG | - | chr5_2:1927784-1927803 | Msa0748680:CDS | 20.0% |
| !! | CTCTATCTATTAGAATTAAT+TGG | - | chr5_2:1927958-1927977 | Msa0748680:five_prime_UTR | 20.0% |
| !!! | CTATCTATTTTTTTCAAGTA+GGG | + | chr5_2:1928019-1928038 | None:intergenic | 20.0% |
| !!! | TCTATCTATTTTTTTCAAGT+AGG | + | chr5_2:1928020-1928039 | None:intergenic | 20.0% |
| !!! | ATCATTTGAAATGAATGATA+AGG | - | chr5_2:1928111-1928130 | Msa0748680:five_prime_UTR | 20.0% |
| !!! | ATGAGTAAGAGGTTTTATTT+TGG | + | chr5_2:1921497-1921516 | None:intergenic | 25.0% |
| ! | ATAAATGGGAGAAAATTCAA+CGG | + | chr5_2:1921550-1921569 | None:intergenic | 25.0% |
| !! | GCGTTGATCTATAAATAAAT+GGG | + | chr5_2:1921564-1921583 | None:intergenic | 25.0% |
| !!! | CTTTTAAGGAAATGACTTAT+TGG | + | chr5_2:1921598-1921617 | None:intergenic | 25.0% |
| ! | GAGAAAATTAAGAAGAGAAT+AGG | + | chr5_2:1921696-1921715 | None:intergenic | 25.0% |
| ! | TCCACTTCACTAAAAATAAA+TGG | - | chr5_2:1921735-1921754 | Msa0748680:three_prime_UTR | 25.0% |
| ! | GATAATAATTGATCATAGAG+TGG | + | chr5_2:1922000-1922019 | None:intergenic | 25.0% |
| ! | CTTCAAAAATATTCTTCTGT+TGG | - | chr5_2:1922105-1922124 | Msa0748680:intron | 25.0% |
| ! | AAATATTCTTCTGTTGGAAT+TGG | - | chr5_2:1922111-1922130 | Msa0748680:intron | 25.0% |
| !! | TTATTGTCTTGTTAGAAAAC+AGG | + | chr5_2:1922186-1922205 | None:intergenic | 25.0% |
| ! | AAGACACTATGAATTAAACT+AGG | + | chr5_2:1922372-1922391 | None:intergenic | 25.0% |
| ! | AAAAAACTGAAAGAAAGCTT+GGG | + | chr5_2:1922413-1922432 | None:intergenic | 25.0% |
| ! | TAAAAAACTGAAAGAAAGCT+TGG | + | chr5_2:1922414-1922433 | None:intergenic | 25.0% |
| !!! | TAAAAGAGTATTTGGTTTCA+TGG | - | chr5_2:1922656-1922675 | Msa0748680:CDS | 25.0% |
| ! | TCTTAAATGTGGAGAAATAA+AGG | + | chr5_2:1922750-1922769 | None:intergenic | 25.0% |
| ! | AAGTTGAAGGAAAATTTAGA+GGG | + | chr5_2:1922946-1922965 | None:intergenic | 25.0% |
| ! | AAAGTTGAAGGAAAATTTAG+AGG | + | chr5_2:1922947-1922966 | None:intergenic | 25.0% |
| !! | CTAAATTTTCCTTCAACTTT+TGG | - | chr5_2:1922947-1922966 | Msa0748680:intron | 25.0% |
| ! | TTGTGCAAGCATAATAATAA+GGG | + | chr5_2:1923392-1923411 | None:intergenic | 25.0% |
| ! | CTAGTACAAATAGAAGATTA+TGG | - | chr5_2:1923522-1923541 | Msa0748680:intron | 25.0% |
| ! | TCACAAAAAGAATAATAGTG+AGG | - | chr5_2:1923586-1923605 | Msa0748680:intron | 25.0% |
| ! | AAGAATAATAGTGAGGATAA+TGG | - | chr5_2:1923593-1923612 | Msa0748680:intron | 25.0% |
| ! | CAAGATAATAACCCTTAAAT+TGG | + | chr5_2:1923736-1923755 | None:intergenic | 25.0% |
| ! | TACTATACTCCCTTTAATAA+TGG | - | chr5_2:1923762-1923781 | Msa0748680:intron | 25.0% |
| ! | TGCTTTGTACCATTATTAAA+GGG | + | chr5_2:1923774-1923793 | None:intergenic | 25.0% |
| ! | ATGCTTTGTACCATTATTAA+AGG | + | chr5_2:1923775-1923794 | None:intergenic | 25.0% |
| !! | AATAATGGTACAAAGCATTT+AGG | - | chr5_2:1923777-1923796 | Msa0748680:intron | 25.0% |
| ! | AATAATGAGAATGTACATCT+TGG | - | chr5_2:1924003-1924022 | Msa0748680:intron | 25.0% |
| !!! | ATTTTTTGTCAAGTACTTGT+TGG | + | chr5_2:1924072-1924091 | None:intergenic | 25.0% |
| ! | CAAGCTTATCATATAATCTA+GGG | + | chr5_2:1924214-1924233 | None:intergenic | 25.0% |
| ! | ACAAGCTTATCATATAATCT+AGG | + | chr5_2:1924215-1924234 | None:intergenic | 25.0% |
| ! | GATTATATGATAAGCTTGTA+AGG | - | chr5_2:1924216-1924235 | Msa0748680:intron | 25.0% |
| !! | TGTCCAAACAAAAATTCTTT+TGG | - | chr5_2:1924343-1924362 | Msa0748680:intron | 25.0% |
| !! | AAGCCAAAAGAATTTTTGTT+TGG | + | chr5_2:1924349-1924368 | None:intergenic | 25.0% |
| ! | AATAGACTTAGATGCATATT+GGG | - | chr5_2:1924386-1924405 | Msa0748680:intron | 25.0% |
| !! | TGCATATTGGGTTTTTAAAT+CGG | - | chr5_2:1924398-1924417 | Msa0748680:intron | 25.0% |
| ! | ATCTTTACATTCTAACTTTG+AGG | - | chr5_2:1924473-1924492 | Msa0748680:intron | 25.0% |
| ! | AACGATAAGAATCAAAGATA+CGG | + | chr5_2:1924572-1924591 | None:intergenic | 25.0% |
| !! | ATGATTTTCAACATTGTTTC+TGG | - | chr5_2:1924722-1924741 | Msa0748680:intron | 25.0% |
| ! | ATATTTAGTCACATCAATTG+AGG | - | chr5_2:1924904-1924923 | Msa0748680:intron | 25.0% |
| ! | ATTATTTAAGCATGGCTAAT+TGG | - | chr5_2:1924981-1925000 | Msa0748680:intron | 25.0% |
| ! | TTATTTAAGCATGGCTAATT+GGG | - | chr5_2:1924982-1925001 | Msa0748680:intron | 25.0% |
| !! | AGTTTCATATCTTTTTGTAG+AGG | + | chr5_2:1925421-1925440 | None:intergenic | 25.0% |
| ! | CAAAAAGATATGAAACTCTT+AGG | - | chr5_2:1925424-1925443 | Msa0748680:intron | 25.0% |
| ! | ATAAAAAATTCCCCTCATTT+GGG | + | chr5_2:1925694-1925713 | None:intergenic | 25.0% |
| ! | AATAAAAAATTCCCCTCATT+TGG | + | chr5_2:1925695-1925714 | None:intergenic | 25.0% |
| ! | TGAAAGAAATAGAAGACATT+GGG | + | chr5_2:1925752-1925771 | None:intergenic | 25.0% |
| !! | CATTTTCACTGTTTAAAAAG+AGG | - | chr5_2:1925900-1925919 | Msa0748680:intron | 25.0% |
| ! | TTTATCCAAGAATCAAATTC+TGG | - | chr5_2:1926004-1926023 | Msa0748680:intron | 25.0% |
| ! | ATATGATTACATTCATCAGA+AGG | - | chr5_2:1926264-1926283 | Msa0748680:intron | 25.0% |
| !!! | AACTCTTTTTTCTTCTTCAT+AGG | + | chr5_2:1926292-1926311 | None:intergenic | 25.0% |
| !! | CAATTTGTCTCATTTTGTAT+TGG | - | chr5_2:1926355-1926374 | Msa0748680:intron | 25.0% |
| !! | TTGAAAGCTTGTAATTTTGT+AGG | + | chr5_2:1926400-1926419 | None:intergenic | 25.0% |
| !! | GTCCATATTTCCATTTTATA+TGG | - | chr5_2:1926425-1926444 | Msa0748680:intron | 25.0% |
| !!! | CTTGAAAACTCTGATTTTTT+AGG | - | chr5_2:1926568-1926587 | Msa0748680:intron | 25.0% |
| !!! | TTACTACTTTCTAGTTTCTA+TGG | + | chr5_2:1926731-1926750 | None:intergenic | 25.0% |
| ! | TACAGCATTACTATAAAAAG+AGG | + | chr5_2:1926776-1926795 | None:intergenic | 25.0% |
| !! | TATTGATGATATCTTACAGT+TGG | + | chr5_2:1927219-1927238 | None:intergenic | 25.0% |
| ! | TTATTTGCATATCTCTATGT+TGG | - | chr5_2:1927243-1927262 | Msa0748680:intron | 25.0% |
| !! | ATAACTGGTTTATCAATCAA+AGG | - | chr5_2:1927382-1927401 | Msa0748680:intron | 25.0% |
| !! | ATTAGAATTAATTGGTAGCA+TGG | - | chr5_2:1927966-1927985 | Msa0748680:intron | 25.0% |
| ! | TACATAGAATTAAATACAGC+AGG | - | chr5_2:1928070-1928089 | Msa0748680:five_prime_UTR | 25.0% |
| ! | ACATAGAATTAAATACAGCA+GGG | - | chr5_2:1928071-1928090 | Msa0748680:five_prime_UTR | 25.0% |
| ! | CGCGTTGATCTATAAATAAA+TGG | + | chr5_2:1921565-1921584 | None:intergenic | 30.0% |
| TAAGGAAATGACTTATTGGA+AGG | + | chr5_2:1921594-1921613 | None:intergenic | 30.0% | |
| !!! | GATTTGGAAAAGCACTTTTA+AGG | + | chr5_2:1921612-1921631 | None:intergenic | 30.0% |
| TAAGTTGTTGAATGTTGATG+TGG | + | chr5_2:1921656-1921675 | None:intergenic | 30.0% | |
| ! | AAGAGAATAGGGAATTTTGA+GGG | + | chr5_2:1921684-1921703 | None:intergenic | 30.0% |
| !!! | GCCATTTATTTTTAGTGAAG+TGG | + | chr5_2:1921739-1921758 | None:intergenic | 30.0% |
| AAGAAGAAGAAGATGAAGAA+AGG | - | chr5_2:1921806-1921825 | Msa0748680:three_prime_UTR | 30.0% | |
| AGAAGAAGAAGATGAAGAAA+GGG | - | chr5_2:1921807-1921826 | Msa0748680:three_prime_UTR | 30.0% | |
| TCAACAGAATTTCATGCAAA+TGG | - | chr5_2:1921873-1921892 | Msa0748680:three_prime_UTR | 30.0% | |
| TTTCACAATTGTTGTCATTC+CGG | + | chr5_2:1921936-1921955 | None:intergenic | 30.0% | |
| GAATGACAACAATTGTGAAA+CGG | - | chr5_2:1921936-1921955 | Msa0748680:intron | 30.0% | |
| GAATACAAAGCAGAGATATT+AGG | - | chr5_2:1921970-1921989 | Msa0748680:exon | 30.0% | |
| TTCTGTTGGAATTGGAAATA+TGG | - | chr5_2:1922119-1922138 | Msa0748680:intron | 30.0% | |
| GTTTGAACTATAGTAAGAAG+TGG | + | chr5_2:1922338-1922357 | None:intergenic | 30.0% | |
| CTTGTGCAAGCATAATAATA+AGG | + | chr5_2:1923393-1923412 | None:intergenic | 30.0% | |
| !! | ACCTTATTTCCCTAATTTTG+TGG | - | chr5_2:1923477-1923496 | Msa0748680:intron | 30.0% |
| TCCACAAAATTAGGGAAATA+AGG | + | chr5_2:1923481-1923500 | None:intergenic | 30.0% | |
| AGATTATGGGATTTGTATTG+TGG | - | chr5_2:1923536-1923555 | Msa0748680:intron | 30.0% | |
| ! | GATAATGGTAGAAAAATCAG+TGG | - | chr5_2:1923608-1923627 | Msa0748680:intron | 30.0% |
| !!! | TTTTTTGCTGAAACCTTCAT+GGG | - | chr5_2:1923872-1923891 | Msa0748680:intron | 30.0% |
| AAAAACAGTGTCATCAAGTT+TGG | + | chr5_2:1923934-1923953 | None:intergenic | 30.0% | |
| GAATAGACTTAGATGCATAT+TGG | - | chr5_2:1924385-1924404 | Msa0748680:intron | 30.0% | |
| ! | GCATATTGGGTTTTTAAATC+GGG | - | chr5_2:1924399-1924418 | Msa0748680:intron | 30.0% |
| ATCGTTCTTGTATTGAACAT+TGG | - | chr5_2:1924586-1924605 | Msa0748680:intron | 30.0% | |
| CAAATTCAAATAATGATCGG+AGG | - | chr5_2:1924786-1924805 | Msa0748680:intron | 30.0% | |
| TTTGTGTGTCCAAATAATTG+AGG | - | chr5_2:1924957-1924976 | Msa0748680:intron | 30.0% | |
| ! | ATTGAGGCATTATTTAAGCA+TGG | - | chr5_2:1924973-1924992 | Msa0748680:intron | 30.0% |
| TAAAAAATTCCCCTCATTTG+GGG | + | chr5_2:1925693-1925712 | None:intergenic | 30.0% | |
| GTGAAAGAAATAGAAGACAT+TGG | + | chr5_2:1925753-1925772 | None:intergenic | 30.0% | |
| TGAAATCCAACTAGAAACAA+TGG | - | chr5_2:1925863-1925882 | Msa0748680:intron | 30.0% | |
| !! | TTGTTTCCATTGTTTCTAGT+TGG | + | chr5_2:1925872-1925891 | None:intergenic | 30.0% |
| GTAAACCAGAATTTGATTCT+TGG | + | chr5_2:1926012-1926031 | None:intergenic | 30.0% | |
| TTGGTTGCATGGAAAAAATT+TGG | + | chr5_2:1926039-1926058 | None:intergenic | 30.0% | |
| !!! | AATTTTTTCCATGCAACCAA+AGG | - | chr5_2:1926039-1926058 | Msa0748680:intron | 30.0% |
| ! | GGATATAGTCTTAAACAATG+TGG | - | chr5_2:1926175-1926194 | Msa0748680:intron | 30.0% |
| TAAAAAGAGGCAAAATCTGA+GGG | + | chr5_2:1926763-1926782 | None:intergenic | 30.0% | |
| ATAAAAAGAGGCAAAATCTG+AGG | + | chr5_2:1926764-1926783 | None:intergenic | 30.0% | |
| ! | GTCTAAGATCAATGAAACTA+TGG | - | chr5_2:1926850-1926869 | Msa0748680:intron | 30.0% |
| TGATATCTTACAGTTGGATA+GGG | + | chr5_2:1927213-1927232 | None:intergenic | 30.0% | |
| ATGATATCTTACAGTTGGAT+AGG | + | chr5_2:1927214-1927233 | None:intergenic | 30.0% | |
| ! | TGTTTTATAGGAGGAAGATA+AGG | - | chr5_2:1927317-1927336 | Msa0748680:intron | 30.0% |
| GGTTTATCAATCAAAGGAAA+AGG | - | chr5_2:1927388-1927407 | Msa0748680:intron | 30.0% | |
| !!! | ATTTTTTATGATAGCAGTGC+AGG | - | chr5_2:1927612-1927631 | Msa0748680:CDS | 30.0% |
| ! | ATATTTTTCACATGAAGCTC+TGG | + | chr5_2:1927650-1927669 | None:intergenic | 30.0% |
| GCTCATGAATGTGAAAATAA+TGG | - | chr5_2:1927777-1927796 | Msa0748680:CDS | 30.0% | |
| TCCTTGCATTGTTAAATATG+AGG | - | chr5_2:1927876-1927895 | Msa0748680:exon | 30.0% | |
| ACCTCATATTTAACAATGCA+AGG | + | chr5_2:1927880-1927899 | None:intergenic | 30.0% | |
| CTCACTACCAAAAAAATATG+AGG | - | chr5_2:1927902-1927921 | Msa0748680:five_prime_UTR | 30.0% | |
| GGAAAATTGTGATGAGTAAG+AGG | + | chr5_2:1921508-1921527 | None:intergenic | 35.0% | |
| ! | GAAGAGAATAGGGAATTTTG+AGG | + | chr5_2:1921685-1921704 | None:intergenic | 35.0% |
| AATTGGAAATATGGATCCCA+AGG | - | chr5_2:1922128-1922147 | Msa0748680:intron | 35.0% | |
| ATAAAGTGATCAAGCTCCTT+GGG | + | chr5_2:1922147-1922166 | None:intergenic | 35.0% | |
| AGACTCACACATCTTAAATG+TGG | + | chr5_2:1922761-1922780 | None:intergenic | 35.0% | |
| TTATAGGGACCAAAAGTTGA+AGG | + | chr5_2:1922959-1922978 | None:intergenic | 35.0% | |
| CCTTAAGCTCCACAAAATTA+GGG | + | chr5_2:1923489-1923508 | None:intergenic | 35.0% | |
| ACCTTAAGCTCCACAAAATT+AGG | + | chr5_2:1923490-1923509 | None:intergenic | 35.0% | |
| TCAGTGAATCAGATTTGTCT+TGG | - | chr5_2:1923697-1923716 | Msa0748680:intron | 35.0% | |
| ! | TGTGGCTAGTTCCAATTTAA+GGG | - | chr5_2:1923722-1923741 | Msa0748680:intron | 35.0% |
| TAATCTTGTCCCACTTGTTT+AGG | - | chr5_2:1923828-1923847 | Msa0748680:intron | 35.0% | |
| AATCTTGTCCCACTTGTTTA+GGG | - | chr5_2:1923829-1923848 | Msa0748680:intron | 35.0% | |
| !!! | CTTTTTTGCTGAAACCTTCA+TGG | - | chr5_2:1923871-1923890 | Msa0748680:intron | 35.0% |
| ! | TTTTTGCTGAAACCTTCATG+GGG | - | chr5_2:1923873-1923892 | Msa0748680:intron | 35.0% |
| CACAGAAATGTACAATGATG+GGG | + | chr5_2:1923969-1923988 | None:intergenic | 35.0% | |
| CCACAGAAATGTACAATGAT+GGG | + | chr5_2:1923970-1923989 | None:intergenic | 35.0% | |
| ACCACAGAAATGTACAATGA+TGG | + | chr5_2:1923971-1923990 | None:intergenic | 35.0% | |
| !! | TGTACATCTTGGTATTGATG+TGG | - | chr5_2:1924014-1924033 | Msa0748680:intron | 35.0% |
| !! | ACTTTGAGGTGAAGTTTGTT+AGG | - | chr5_2:1924487-1924506 | Msa0748680:CDS | 35.0% |
| TCACACTAAAAAAGAGGAGT+GGG | + | chr5_2:1924680-1924699 | None:intergenic | 35.0% | |
| ATCACACTAAAAAAGAGGAG+TGG | + | chr5_2:1924681-1924700 | None:intergenic | 35.0% | |
| TTGTTGCAACTGTTCTTTGA+AGG | + | chr5_2:1925066-1925085 | None:intergenic | 35.0% | |
| TAAAGACTGCATTTGTCAAG+GGG | + | chr5_2:1925228-1925247 | None:intergenic | 35.0% | |
| GTAAAGACTGCATTTGTCAA+GGG | + | chr5_2:1925229-1925248 | None:intergenic | 35.0% | |
| ! | TGATTAGTTGTATAGGGTGA+TGG | - | chr5_2:1925258-1925277 | Msa0748680:intron | 35.0% |
| !! | TGAAACTCTTAGGCTTTGTT+TGG | - | chr5_2:1925434-1925453 | Msa0748680:intron | 35.0% |
| !! | GAAACTCTTAGGCTTTGTTT+GGG | - | chr5_2:1925435-1925454 | Msa0748680:intron | 35.0% |
| GAACTCAAAAATTGTGTTGG+GGG | + | chr5_2:1925670-1925689 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGTGTTG+GGG | + | chr5_2:1925671-1925690 | None:intergenic | 35.0% | |
| GGGAACTCAAAAATTGTGTT+GGG | + | chr5_2:1925672-1925691 | None:intergenic | 35.0% | |
| AAAAAATTCCCCTCATTTGG+GGG | + | chr5_2:1925692-1925711 | None:intergenic | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | + | chr5_2:1925749-1925768 | None:intergenic | 35.0% | |
| !! | GAGGATTTTGGAAAAAAGGA+AGG | + | chr5_2:1925781-1925800 | None:intergenic | 35.0% |
| !! | GGTTCTTTAAGGCTTTGTTT+GGG | + | chr5_2:1925825-1925844 | None:intergenic | 35.0% |
| !! | TGGTTCTTTAAGGCTTTGTT+TGG | + | chr5_2:1925826-1925845 | None:intergenic | 35.0% |
| AAAGCCTTAAAGAACCATCA+TGG | - | chr5_2:1925829-1925848 | Msa0748680:intron | 35.0% | |
| TTCACCATGATGGTTCTTTA+AGG | + | chr5_2:1925836-1925855 | None:intergenic | 35.0% | |
| ! | TCAAATACTCCAGTTTCTAG+TGG | - | chr5_2:1925952-1925971 | Msa0748680:intron | 35.0% |
| TTTATGCTTCCACTAGAAAC+TGG | + | chr5_2:1925964-1925983 | None:intergenic | 35.0% | |
| TAAACAATCCTTTGGTTGCA+TGG | + | chr5_2:1926050-1926069 | None:intergenic | 35.0% | |
| !! | CTTTAAAACGTATGAGGTCT+AGG | - | chr5_2:1926148-1926167 | Msa0748680:intron | 35.0% |
| AAAAAGAGGCAAAATCTGAG+GGG | + | chr5_2:1926762-1926781 | None:intergenic | 35.0% | |
| ATTATGAGCAGGTGTATCTT+CGG | - | chr5_2:1926879-1926898 | Msa0748680:intron | 35.0% | |
| TTGAAGCATGAACTCAAACA+AGG | - | chr5_2:1927069-1927088 | Msa0748680:intron | 35.0% | |
| TGAACTCAAACAAGGTTACA+AGG | - | chr5_2:1927077-1927096 | Msa0748680:intron | 35.0% | |
| TCAATCAAAGGAAAAGGAAC+TGG | - | chr5_2:1927394-1927413 | Msa0748680:intron | 35.0% | |
| TAATGGAATACGGATGTAGA+AGG | - | chr5_2:1927794-1927813 | Msa0748680:CDS | 35.0% | |
| AATGGAATACGGATGTAGAA+GGG | - | chr5_2:1927795-1927814 | Msa0748680:CDS | 35.0% | |
| !!! | GCAGCAACCTCATATTTTTT+TGG | + | chr5_2:1927912-1927931 | None:intergenic | 35.0% |
| ! | TGCTGCTTGATATCTGATAT+CGG | - | chr5_2:1927926-1927945 | Msa0748680:five_prime_UTR | 35.0% |
| ATATCTGATATCGGAGGATA+AGG | - | chr5_2:1927935-1927954 | Msa0748680:five_prime_UTR | 35.0% | |
| AGAAAATTCAACGGTGGGAT+TGG | + | chr5_2:1921541-1921560 | None:intergenic | 40.0% | |
| ATGGGAGAAAATTCAACGGT+GGG | + | chr5_2:1921546-1921565 | None:intergenic | 40.0% | |
| AATGGGAGAAAATTCAACGG+TGG | + | chr5_2:1921547-1921566 | None:intergenic | 40.0% | |
| GAACGAAGGAAGAAGAGATT+TGG | + | chr5_2:1921628-1921647 | None:intergenic | 40.0% | |
| !! | AATAGGGAATTTTGAGGGAG+TGG | + | chr5_2:1921679-1921698 | None:intergenic | 40.0% |
| ! | GTGAAGTGGAAACACTTTTG+AGG | + | chr5_2:1921725-1921744 | None:intergenic | 40.0% |
| !! | GCTGGAAAGCTATTTCTTGT+TGG | + | chr5_2:1921777-1921796 | None:intergenic | 40.0% |
| TCATGCAAATGGAACCAGAA+AGG | - | chr5_2:1921884-1921903 | Msa0748680:three_prime_UTR | 40.0% | |
| !!! | ATGCTTTTTTCCCTCCTTTC+TGG | + | chr5_2:1921901-1921920 | None:intergenic | 40.0% |
| AGAAAGGAGGGAAAAAAGCA+TGG | - | chr5_2:1921900-1921919 | Msa0748680:intron | 40.0% | |
| CATAAAGTGATCAAGCTCCT+TGG | + | chr5_2:1922148-1922167 | None:intergenic | 40.0% | |
| CAAGGAGCTTGATCACTTTA+TGG | - | chr5_2:1922146-1922165 | Msa0748680:intron | 40.0% | |
| !! | AGTGTCTTAATTTGCCTCAC+TGG | - | chr5_2:1922384-1922403 | Msa0748680:intron | 40.0% |
| TGCGAAGACATCAACATGTA+GGG | - | chr5_2:1922704-1922723 | Msa0748680:CDS | 40.0% | |
| ! | CCCTAATTTTGTGGAGCTTA+AGG | - | chr5_2:1923486-1923505 | Msa0748680:intron | 40.0% |
| ! | ATCAGATTTGTCTTGGTGTG+TGG | - | chr5_2:1923704-1923723 | Msa0748680:intron | 40.0% |
| ! | GTGTGGCTAGTTCCAATTTA+AGG | - | chr5_2:1923721-1923740 | Msa0748680:intron | 40.0% |
| ATCTTGTCCCACTTGTTTAG+GGG | - | chr5_2:1923830-1923849 | Msa0748680:intron | 40.0% | |
| TCAAAATCTGATCCCCATGA+AGG | + | chr5_2:1923888-1923907 | None:intergenic | 40.0% | |
| CCCATCATTGTACATTTCTG+TGG | - | chr5_2:1923967-1923986 | Msa0748680:intron | 40.0% | |
| TGGTTGCTCATACTTTAGCT+AGG | - | chr5_2:1924523-1924542 | Msa0748680:CDS | 40.0% | |
| TGCTCATACTTTAGCTAGGA+CGG | - | chr5_2:1924527-1924546 | Msa0748680:CDS | 40.0% | |
| CGTAAAGACTGCATTTGTCA+AGG | + | chr5_2:1925230-1925249 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr5_2:1925442-1925461 | Msa0748680:intron | 40.0% |
| ! | CTTTGTTTGGGAGTTTGGAA+GGG | - | chr5_2:1925447-1925466 | Msa0748680:intron | 40.0% |
| TCAAAAATTGTGTTGGGGGA+GGG | + | chr5_2:1925666-1925685 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGTGT+TGG | + | chr5_2:1925673-1925692 | None:intergenic | 40.0% | |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | chr5_2:1925679-1925698 | Msa0748680:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | - | chr5_2:1925680-1925699 | Msa0748680:intron | 40.0% |
| !! | AGGGGAGGATTTTGGAAAAA+AGG | + | chr5_2:1925785-1925804 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | chr5_2:1925818-1925837 | None:intergenic | 40.0% |
| TCACATTCTCTTCACCATGA+TGG | + | chr5_2:1925846-1925865 | None:intergenic | 40.0% | |
| !! | GGAGCTCTTTAAAACGTATG+AGG | - | chr5_2:1926142-1926161 | Msa0748680:intron | 40.0% |
| AAAAGAGGCAAAATCTGAGG+GGG | + | chr5_2:1926761-1926780 | None:intergenic | 40.0% | |
| TATGGTGCATCATTATGAGC+AGG | - | chr5_2:1926868-1926887 | Msa0748680:intron | 40.0% | |
| TTATGAGCAGGTGTATCTTC+GGG | - | chr5_2:1926880-1926899 | Msa0748680:intron | 40.0% | |
| AACGCTAGGTTATACAACGA+AGG | - | chr5_2:1926955-1926974 | Msa0748680:intron | 40.0% | |
| AAAGACCTTTCAGTCTCTGT+GGG | + | chr5_2:1927027-1927046 | None:intergenic | 40.0% | |
| AGAGACTGAAAGGTCTTTGA+TGG | - | chr5_2:1927029-1927048 | Msa0748680:intron | 40.0% | |
| ATTCTACGAAAGAGAAGAGC+TGG | - | chr5_2:1927126-1927145 | Msa0748680:intron | 40.0% | |
| TTCTACGAAAGAGAAGAGCT+GGG | - | chr5_2:1927127-1927146 | Msa0748680:intron | 40.0% | |
| TTGCCACCAAGCTTTCAAAA+GGG | + | chr5_2:1927175-1927194 | None:intergenic | 40.0% | |
| ATTGCCACCAAGCTTTCAAA+AGG | + | chr5_2:1927176-1927195 | None:intergenic | 40.0% | |
| GGTGGCAATCACATTCTAAA+TGG | - | chr5_2:1927187-1927206 | Msa0748680:intron | 40.0% | |
| !!! | TTTTGGAGCTACTAGAGGAT+GGG | + | chr5_2:1927431-1927450 | None:intergenic | 40.0% |
| ATGGAATACGGATGTAGAAG+GGG | - | chr5_2:1927796-1927815 | Msa0748680:CDS | 40.0% | |
| TGCTTGATATCTGATATCGG+AGG | - | chr5_2:1927929-1927948 | Msa0748680:five_prime_UTR | 40.0% | |
| TTGATGTGGTGTGAGAACGA+AGG | + | chr5_2:1921642-1921661 | None:intergenic | 45.0% | |
| CTTCTTCTTCTGTGAAACGC+TGG | + | chr5_2:1921795-1921814 | None:intergenic | 45.0% | |
| !! | AAGATGAAGAAAGGGCATCC+TGG | - | chr5_2:1921815-1921834 | Msa0748680:three_prime_UTR | 45.0% |
| ! | GTTGTTGTTGTTGTTGTGCC+AGG | + | chr5_2:1921836-1921855 | None:intergenic | 45.0% |
| TGCAAATGGAACCAGAAAGG+AGG | - | chr5_2:1921887-1921906 | Msa0748680:three_prime_UTR | 45.0% | |
| GCAAATGGAACCAGAAAGGA+GGG | - | chr5_2:1921888-1921907 | Msa0748680:three_prime_UTR | 45.0% | |
| ! | GGAGGGAAAAAAGCATGGAT+CGG | - | chr5_2:1921905-1921924 | Msa0748680:intron | 45.0% |
| CACAATTGTTGTCATTCCGG+TGG | + | chr5_2:1921933-1921952 | None:intergenic | 45.0% | |
| ATCCTTGGAAGCTGATCAAC+CGG | + | chr5_2:1922054-1922073 | None:intergenic | 45.0% | |
| TGAAGCTGAGCATCAATCCT+TGG | + | chr5_2:1922069-1922088 | None:intergenic | 45.0% | |
| GATTGATGCTCAGCTTCAAC+AGG | - | chr5_2:1922071-1922090 | Msa0748680:intron | 45.0% | |
| CTGCGAAGACATCAACATGT+AGG | - | chr5_2:1922703-1922722 | Msa0748680:CDS | 45.0% | |
| GCGAAGACATCAACATGTAG+GGG | - | chr5_2:1922705-1922724 | Msa0748680:CDS | 45.0% | |
| GAACACACCCCTAAACAAGT+GGG | + | chr5_2:1923840-1923859 | None:intergenic | 45.0% | |
| AGAACACACCCCTAAACAAG+TGG | + | chr5_2:1923841-1923860 | None:intergenic | 45.0% | |
| TGTTAGGAGACAAGCGAACA+TGG | - | chr5_2:1924503-1924522 | Msa0748680:CDS | 45.0% | |
| GGAGGCAGATAAACACATGA+GGG | - | chr5_2:1924804-1924823 | Msa0748680:intron | 45.0% | |
| !! | GTTGTATAGGGTGATGGAAG+TGG | - | chr5_2:1925264-1925283 | Msa0748680:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+AGG | - | chr5_2:1925446-1925465 | Msa0748680:intron | 45.0% |
| TTTGGGAGTTTGGAAGGGAA+GGG | - | chr5_2:1925452-1925471 | Msa0748680:intron | 45.0% | |
| CTCAAAAATTGTGTTGGGGG+AGG | + | chr5_2:1925667-1925686 | None:intergenic | 45.0% | |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | - | chr5_2:1925681-1925700 | Msa0748680:intron | 45.0% |
| TAGAAGACATTGGGAGGAGA+GGG | + | chr5_2:1925743-1925762 | None:intergenic | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | + | chr5_2:1925744-1925763 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr5_2:1925813-1925832 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr5_2:1925446-1925465 | None:intergenic | 45.0% |
| AACGTATGAGGTCTAGGTCT+AGG | - | chr5_2:1926154-1926173 | Msa0748680:intron | 45.0% | |
| AAGACCTTTCAGTCTCTGTG+GGG | + | chr5_2:1927026-1927045 | None:intergenic | 45.0% | |
| CAAAGACCTTTCAGTCTCTG+TGG | + | chr5_2:1927028-1927047 | None:intergenic | 45.0% | |
| GGTCTTTGATGGAACGAGTT+AGG | - | chr5_2:1927040-1927059 | Msa0748680:intron | 45.0% | |
| CCAAGCTTTCAAAAGGGATG+TGG | + | chr5_2:1927169-1927188 | None:intergenic | 45.0% | |
| !! | CCACATCCCTTTTGAAAGCT+TGG | - | chr5_2:1927166-1927185 | Msa0748680:intron | 45.0% |
| !! | CATCCCTTTTGAAAGCTTGG+TGG | - | chr5_2:1927169-1927188 | Msa0748680:intron | 45.0% |
| GGAGGAAGATAAGGCTAGAT+TGG | - | chr5_2:1927326-1927345 | Msa0748680:intron | 45.0% | |
| AGATAAGGCTAGATTGGTGC+AGG | - | chr5_2:1927332-1927351 | Msa0748680:intron | 45.0% | |
| ! | TTTGGAGCTACTAGAGGATG+GGG | + | chr5_2:1927430-1927449 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGCTACTAGAGGA+TGG | + | chr5_2:1927432-1927451 | None:intergenic | 45.0% |
| !!! | CTTGGTTTTGGAGCTACTAG+AGG | + | chr5_2:1927436-1927455 | None:intergenic | 45.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr5_2:1923134-1923153 | None:intergenic | 5.0% |
| !!! | AAAAAATTCTAAATTTTTTT+TGG | - | chr5_2:1923173-1923192 | Msa0748680:intron | 5.0% |
| ! | GGTGGGATTGGTGATAACGT+GGG | + | chr5_2:1921529-1921548 | None:intergenic | 50.0% |
| AAAGCATGGATCGGAACCAC+CGG | - | chr5_2:1921914-1921933 | Msa0748680:intron | 50.0% | |
| GTGTCTCAGAATTGCGACAC+CGG | - | chr5_2:1922032-1922051 | Msa0748680:intron | 50.0% | |
| ! | TTCTGATGGACAGCAGTACG+AGG | - | chr5_2:1923650-1923669 | Msa0748680:intron | 50.0% |
| ! | GACAGCAGTACGAGGCATTT+GGG | - | chr5_2:1923658-1923677 | Msa0748680:intron | 50.0% |
| TAGCTAGGACGGTCTGTTCT+TGG | - | chr5_2:1924538-1924557 | Msa0748680:CDS | 50.0% | |
| AGCTAGGACGGTCTGTTCTT+GGG | - | chr5_2:1924539-1924558 | Msa0748680:CDS | 50.0% | |
| CGGAGGCAGATAAACACATG+AGG | - | chr5_2:1924803-1924822 | Msa0748680:intron | 50.0% | |
| ACATGTCCGTGTTCATGCCA+TGG | - | chr5_2:1925085-1925104 | Msa0748680:intron | 50.0% | |
| CAGTCTCTGCAAAGCTTGAC+AGG | - | chr5_2:1925137-1925156 | Msa0748680:intron | 50.0% | |
| GTTTGGGAGTTTGGAAGGGA+AGG | - | chr5_2:1925451-1925470 | Msa0748680:intron | 50.0% | |
| ! | TTGTGTTGGGGGAGGGTTTT+GGG | + | chr5_2:1925659-1925678 | None:intergenic | 50.0% |
| ! | ATTGTGTTGGGGGAGGGTTT+TGG | + | chr5_2:1925660-1925679 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr5_2:1925445-1925464 | None:intergenic | 50.0% |
| GTATCTTCGGGTGAAGGAAC+AGG | - | chr5_2:1926892-1926911 | Msa0748680:intron | 50.0% | |
| GTCAGACGATGAAGATGAGC+AGG | - | chr5_2:1926924-1926943 | Msa0748680:intron | 50.0% | |
| AACGAAGGAAGCAGCCTTGA+TGG | - | chr5_2:1926970-1926989 | Msa0748680:intron | 50.0% | |
| !! | CAAGAGTATCGACGCCATCA+AGG | + | chr5_2:1926987-1927006 | None:intergenic | 50.0% |
| !! | CTTGATGGCGTCGATACTCT+TGG | - | chr5_2:1926985-1927004 | Msa0748680:intron | 50.0% |
| TAGTCCCCACAGAGACTGAA+AGG | - | chr5_2:1927019-1927038 | Msa0748680:intron | 50.0% | |
| GCTAGATTGGTGCAGGAAAC+AGG | - | chr5_2:1927339-1927358 | Msa0748680:intron | 50.0% | |
| ! | CTACCTCTTGCGCTTGGTTT+TGG | + | chr5_2:1927448-1927467 | None:intergenic | 50.0% |
| ATGGTACTACCTCTTGCGCT+TGG | + | chr5_2:1927454-1927473 | None:intergenic | 50.0% | |
| ! | CGGTGGGATTGGTGATAACG+TGG | + | chr5_2:1921530-1921549 | None:intergenic | 55.0% |
| ! | CACCGGTTGATCAGCTTCCA+AGG | - | chr5_2:1922049-1922068 | Msa0748680:intron | 55.0% |
| GAAAGCTTGGGAGTCCAGTG+AGG | + | chr5_2:1922401-1922420 | None:intergenic | 55.0% | |
| ! | GGACAGCAGTACGAGGCATT+TGG | - | chr5_2:1923657-1923676 | Msa0748680:intron | 55.0% |
| TGTCCGTGTTCATGCCATGG+AGG | - | chr5_2:1925088-1925107 | Msa0748680:intron | 55.0% | |
| CTGCCTCCATGGCATGAACA+CGG | + | chr5_2:1925094-1925113 | None:intergenic | 55.0% | |
| TCATGCCATGGAGGCAGTGA+TGG | - | chr5_2:1925097-1925116 | Msa0748680:intron | 55.0% | |
| ACAAGCCATCACTGCCTCCA+TGG | + | chr5_2:1925105-1925124 | None:intergenic | 55.0% | |
| ! | TGGAGGCAGTGATGGCTTGT+TGG | - | chr5_2:1925105-1925124 | Msa0748680:intron | 55.0% |
| !! | GGAGGCAGTGATGGCTTGTT+GGG | - | chr5_2:1925106-1925125 | Msa0748680:intron | 55.0% |
| GGAGTTTGGAAGGGAAGGGA+GGG | - | chr5_2:1925456-1925475 | Msa0748680:intron | 55.0% | |
| GAGTTTGGAAGGGAAGGGAG+GGG | - | chr5_2:1925457-1925476 | Msa0748680:intron | 55.0% | |
| !!! | GGGTTTTGGGGGGTTATGGA+GGG | + | chr5_2:1925646-1925665 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTATGG+AGG | + | chr5_2:1925647-1925666 | None:intergenic | 55.0% |
| ! | TGTGTTGGGGGAGGGTTTTG+GGG | + | chr5_2:1925658-1925677 | None:intergenic | 55.0% |
| ACATTGGGAGGAGAGGGCTT+TGG | + | chr5_2:1925737-1925756 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | chr5_2:1925808-1925827 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr5_2:1925809-1925828 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr5_2:1925810-1925829 | None:intergenic | 55.0% | |
| GAGGCAAAATCTGAGGGGGT+TGG | + | chr5_2:1926757-1926776 | None:intergenic | 55.0% | |
| GCAGGTGTATCTTCGGGTGA+AGG | - | chr5_2:1926886-1926905 | Msa0748680:intron | 55.0% | |
| AGCAGGCAGAGAGTAACGCT+AGG | - | chr5_2:1926941-1926960 | Msa0748680:intron | 55.0% | |
| !! | GGCGTCGATACTCTTGGCTT+TGG | - | chr5_2:1926991-1927010 | Msa0748680:intron | 55.0% |
| TCAGTCTCTGTGGGGACTAG+AGG | + | chr5_2:1927018-1927037 | None:intergenic | 55.0% | |
| AGAAGAGCTGGGAAACTCCC+TGG | - | chr5_2:1927138-1927157 | Msa0748680:intron | 55.0% | |
| GAAGAGCTGGGAAACTCCCT+GGG | - | chr5_2:1927139-1927158 | Msa0748680:intron | 55.0% | |
| AAGAGCTGGGAAACTCCCTG+GGG | - | chr5_2:1927140-1927159 | Msa0748680:intron | 55.0% | |
| AAAGGGATGTGGTGTCCCCA+GGG | + | chr5_2:1927158-1927177 | None:intergenic | 55.0% | |
| AAAAGGGATGTGGTGTCCCC+AGG | + | chr5_2:1927159-1927178 | None:intergenic | 55.0% | |
| GCTCCAAAACCAAGCGCAAG+AGG | - | chr5_2:1927442-1927461 | Msa0748680:intron | 55.0% | |
| GGGAGTTTGGAAGGGAAGGG+AGG | - | chr5_2:1925455-1925474 | Msa0748680:intron | 60.0% | |
| TTTGGAAGGGAAGGGAGGGG+AGG | - | chr5_2:1925460-1925479 | Msa0748680:intron | 60.0% | |
| TTGGAAGGGAAGGGAGGGGA+GGG | - | chr5_2:1925461-1925480 | Msa0748680:intron | 60.0% | |
| !!! | GGGAGGGTTTTGGGGGGTTA+TGG | + | chr5_2:1925650-1925669 | None:intergenic | 60.0% |
| !!! | TGTTGGGGGAGGGTTTTGGG+GGG | + | chr5_2:1925656-1925675 | None:intergenic | 60.0% |
| !! | GTGTTGGGGGAGGGTTTTGG+GGG | + | chr5_2:1925657-1925676 | None:intergenic | 60.0% |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | + | chr5_2:1925734-1925753 | None:intergenic | 60.0% |
| GGAAGGGAGGGGAGGGCTTT+GGG | - | chr5_2:1925468-1925487 | Msa0748680:intron | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | - | chr5_2:1925469-1925488 | Msa0748680:intron | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | - | chr5_2:1925470-1925489 | Msa0748680:intron | 65.0% |
| ! | GGGAGGGGAGGGGAGGATTT+TGG | + | chr5_2:1925793-1925812 | None:intergenic | 65.0% |
| GAGTTTGGAGGGGAGGGGAG+GGG | + | chr5_2:1925803-1925822 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | chr5_2:1925804-1925823 | None:intergenic | 65.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | chr5_2:1925467-1925486 | Msa0748680:intron | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | + | chr5_2:1925800-1925819 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | chr5_2:1925805-1925824 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1921494 | 1928145 | 1921494 | ID=Msa0748680;Name=Msa0748680 |
| chr5_2 | mRNA | 1921494 | 1928145 | 1921494 | ID=Msa0748680-mRNA-1;Parent=Msa0748680;Name=Msa0748680-mRNA-1;_AED=0.09;_eAED=0.09;_QI=232|0.83|0.85|1|0.5|0.28|7|431|333 |
| chr5_2 | exon | 1921494 | 1921911 | 1921494 | ID=Msa0748680-mRNA-1:exon:581;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1921964 | 1922013 | 1921964 | ID=Msa0748680-mRNA-1:exon:580;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1922176 | 1922312 | 1922176 | ID=Msa0748680-mRNA-1:exon:579;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1922418 | 1922749 | 1922418 | ID=Msa0748680-mRNA-1:exon:578;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1924481 | 1924562 | 1924481 | ID=Msa0748680-mRNA-1:exon:577;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1927472 | 1927982 | 1927472 | ID=Msa0748680-mRNA-1:exon:576;Parent=Msa0748680-mRNA-1 |
| chr5_2 | exon | 1928011 | 1928145 | 1928011 | ID=Msa0748680-mRNA-1:exon:575;Parent=Msa0748680-mRNA-1 |
| chr5_2 | five_prime_UTR | 1928011 | 1928145 | 1928011 | ID=Msa0748680-mRNA-1:five_prime_utr;Parent=Msa0748680-mRNA-1 |
| chr5_2 | five_prime_UTR | 1927886 | 1927982 | 1927886 | ID=Msa0748680-mRNA-1:five_prime_utr;Parent=Msa0748680-mRNA-1 |
| chr5_2 | CDS | 1927472 | 1927885 | 1927472 | ID=Msa0748680-mRNA-1:cds;Parent=Msa0748680-mRNA-1 |
| chr5_2 | CDS | 1924481 | 1924562 | 1924481 | ID=Msa0748680-mRNA-1:cds;Parent=Msa0748680-mRNA-1 |
| chr5_2 | CDS | 1922418 | 1922749 | 1922418 | ID=Msa0748680-mRNA-1:cds;Parent=Msa0748680-mRNA-1 |
| chr5_2 | CDS | 1922176 | 1922312 | 1922176 | ID=Msa0748680-mRNA-1:cds;Parent=Msa0748680-mRNA-1 |
| chr5_2 | CDS | 1921977 | 1922013 | 1921977 | ID=Msa0748680-mRNA-1:cds;Parent=Msa0748680-mRNA-1 |
| chr5_2 | three_prime_UTR | 1921964 | 1921976 | 1921964 | ID=Msa0748680-mRNA-1:three_prime_utr;Parent=Msa0748680-mRNA-1 |
| chr5_2 | three_prime_UTR | 1921494 | 1921911 | 1921494 | ID=Msa0748680-mRNA-1:three_prime_utr;Parent=Msa0748680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
