AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0085720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0085720 MtrunA17_Chr1g0201341 90.226 399 4 1 1 399 1 364 0.0 741
Msa0085720 MtrunA17_Chr6g0466631 71.088 377 74 1 1 377 1 342 0.0 566
Msa0085720 MtrunA17_Chr3g0081621 58.543 398 128 3 2 399 113 473 1.93e-169 483
Msa0085720 MtrunA17_Chr8g0354091 56.630 362 114 3 16 377 36 354 4.58e-149 427
Msa0085720 MtrunA17_Chr2g0307011 30.084 359 193 7 27 377 57 365 1.50e-42 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0085720 AT1G74320.1 59.615 364 111 2 17 380 20 347 4.65e-162 459
Msa0085720 AT4G09760.1 57.672 378 122 4 1 377 1 341 1.06e-160 456
Msa0085720 AT4G09760.2 57.672 378 122 4 1 377 1 341 1.06e-160 456
Msa0085720 AT1G71697.1 57.218 381 126 3 1 379 1 346 9.23e-160 453
Msa0085720 AT4G09760.3 51.538 260 88 4 1 259 1 223 1.05e-87 266
Msa0085720 AT4G09760.4 50.204 245 84 4 1 244 1 208 3.96e-79 243
Msa0085720 AT2G26830.1 28.726 369 200 9 18 374 43 360 1.28e-44 159

Find 108 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAATTCAATTGTCTTTA+TGG 0.034762 1_2:+66002668 None:intergenic
ACCATATATTCTGGGGCTTA+TGG 0.170812 1_2:-65999426 Msa0085720:CDS
GTTAAGGAAGCCTACTTTAT+TGG 0.174086 1_2:-65999234 Msa0085720:CDS
ACTGCGGTGGCTTCGGATTT+AGG 0.182122 1_2:-66002606 Msa0085720:CDS
GCTCATCAACCTTCCACTTT+TGG 0.232131 1_2:-65998984 Msa0085720:three_prime_UTR
TAAGCCCTCTTAGAGGAAAT+TGG 0.249578 1_2:-66001465 Msa0085720:intron
TTTAATTCATTGAATCAAAA+TGG 0.260999 1_2:-66002691 Msa0085720:exon
TGCATCCCAAGAAGAATTAA+TGG 0.261372 1_2:-66002637 Msa0085720:CDS
CCATATATTCTGGGGCTTAT+GGG 0.262925 1_2:-65999425 Msa0085720:CDS
CTCGACTCTGTTTCTTCTTC+GGG 0.267579 1_2:-66003112 Msa0085720:intron
TTACTTCCATTAATTCTTCT+TGG 0.282291 1_2:+66002631 None:intergenic
GCCAAATCAAACGGAAATTC+TGG 0.282987 1_2:-66002727 Msa0085720:five_prime_UTR
GGCAGAGGTTTCAGCAATAT+TGG 0.288043 1_2:-65999256 Msa0085720:CDS
ACTCGACTCTGTTTCTTCTT+CGG 0.289865 1_2:-66003113 Msa0085720:five_prime_UTR
TGTCTTAGTGAAGTTAGTTT+TGG 0.292001 1_2:-65999124 Msa0085720:three_prime_UTR
CCGTTTAAAGTGCGTATATT+TGG 0.299170 1_2:+66003292 None:intergenic
GGGCTTATGGGGACTTATTT+CGG 0.306924 1_2:-65999413 Msa0085720:intron
ACCAGAATTTCCGTTTGATT+TGG 0.315235 1_2:+66002726 None:intergenic
CCCATAAGCCCCAGAATATA+TGG 0.317567 1_2:+65999425 None:intergenic
CTCTCGCAAACCATATATTC+TGG 0.321780 1_2:-65999435 Msa0085720:CDS
TGCCACAATGACCTACAATA+TGG 0.321926 1_2:-66000044 Msa0085720:CDS
AAGGTTCTGGTTCGTTTATA+TGG 0.325390 1_2:-66002474 Msa0085720:CDS
AGATGATGAAATAAATATTC+TGG 0.330658 1_2:-66000105 Msa0085720:CDS
TGCCAGGCATATGAAGCTTA+TGG 0.344971 1_2:+66000319 None:intergenic
CAGCGAACCGTTCACAGTTT+CGG 0.346273 1_2:+65999187 None:intergenic
AGTGAATCAATACATATAAA+AGG 0.356442 1_2:+65998864 None:intergenic
GCACAAAGAAGGCTCATATT+TGG 0.357584 1_2:-66000299 Msa0085720:CDS
CTTATGAATGATGATAAATT+AGG 0.357745 1_2:-65998898 Msa0085720:three_prime_UTR
TGACTCTGAAATATCATCTT+TGG 0.359929 1_2:-66000364 Msa0085720:CDS
AGTAATTACTGCGGTGGCTT+CGG 0.364014 1_2:-66002613 Msa0085720:CDS
GGCAAATCATTTCTGTGAAA+TGG 0.366684 1_2:-65999851 Msa0085720:CDS
TACTTCCATTAATTCTTCTT+GGG 0.366751 1_2:+66002632 None:intergenic
AACCGTTCACAGTTTCGGTT+TGG 0.369826 1_2:+65999192 None:intergenic
CCAAATATACGCACTTTAAA+CGG 0.377122 1_2:-66003292 Msa0085720:five_prime_UTR
ACCGTTCACAGTTTCGGTTT+GGG 0.382302 1_2:+65999193 None:intergenic
GACGGTCAAGATTCAAGCTT+TGG 0.387600 1_2:-66001369 Msa0085720:intron
TTGATTTGGCTATAAAATAG+TGG 0.387991 1_2:+66002740 None:intergenic
CTTCTTGCTCGTTTCACTAC+TGG 0.401801 1_2:-66002369 Msa0085720:CDS
TTGGTCATTGCACCTTTCAA+TGG 0.406927 1_2:+66002546 None:intergenic
TGTGAAGGATATCAAGAGAT+TGG 0.415057 1_2:-66000071 Msa0085720:CDS
TGGTGATTTGAGGAAGGTTC+TGG 0.417603 1_2:-66002487 Msa0085720:CDS
TCATAATGTTACCATATTGT+AGG 0.424013 1_2:+66000033 None:intergenic
GGTTTCAGCAATATTGGTTA+AGG 0.427253 1_2:-65999250 Msa0085720:CDS
TTTGGCTTTCTAGACTCTCT+CGG 0.457270 1_2:-66000400 Msa0085720:intron
TGTATATATAGAGAGAGAAT+TGG 0.457900 1_2:+66003223 None:intergenic
TGATTCACCTTAGCATTGCT+TGG 0.458377 1_2:+65999484 None:intergenic
TGTCTTGAATGCATCTCTGC+AGG 0.459261 1_2:+66001416 None:intergenic
GGGATTGTTGATAATGAGAA+TGG 0.462912 1_2:-65998963 Msa0085720:three_prime_UTR
ATATGAGCCTTCTTTGTGCC+AGG 0.463313 1_2:+66000303 None:intergenic
TCTCGCAAACCATATATTCT+GGG 0.466032 1_2:-65999434 Msa0085720:CDS
ATTATCAACAATCCCAAAAG+TGG 0.467941 1_2:+65998971 None:intergenic
CATATATTCTGGGGCTTATG+GGG 0.475167 1_2:-65999424 Msa0085720:CDS
GAACATGAGGTGTATCACTA+TGG 0.476295 1_2:+65999818 None:intergenic
AATAACGTGGTTAAGTGATA+AGG 0.479027 1_2:+66003138 None:intergenic
ATGCATCTCTGCAGGGGAGC+CGG 0.489547 1_2:+66001424 None:intergenic
TTCCATAAGCTTCATATGCC+TGG 0.491466 1_2:-66000321 Msa0085720:CDS
TTTCACAGAAATGATTTGCC+AGG 0.500589 1_2:+65999854 None:intergenic
TCTATTATAATAACAGCTAA+AGG 0.504163 1_2:-65999089 Msa0085720:three_prime_UTR
ACAATATGGTAACATTATGA+TGG 0.504904 1_2:-66000030 Msa0085720:CDS
CTCATATTTGGCAGAGAATG+AGG 0.510591 1_2:-66000287 Msa0085720:intron
CAGAACTCGAGGAGCGTCAA+AGG 0.515090 1_2:-65999658 Msa0085720:CDS
TCATATGCCTGGCACAAAGA+AGG 0.515429 1_2:-66000310 Msa0085720:CDS
CGTGTCTATCTCAGTTCTGA+AGG 0.521286 1_2:-65999629 Msa0085720:intron
TGAAATAAATATTCTGGAGA+AGG 0.522645 1_2:-66000099 Msa0085720:CDS
CTGGTTCGTTTATATGGCGA+AGG 0.529914 1_2:-66002468 Msa0085720:CDS
GTTGATGAGTCCAATAAAGT+AGG 0.531218 1_2:+65999224 None:intergenic
CAATCCTATCGCGTATGACC+TGG 0.533301 1_2:-65999872 Msa0085720:CDS
GTCTTGAATGCATCTCTGCA+GGG 0.536389 1_2:+66001417 None:intergenic
AAGACAATTGAATTATTGAA+AGG 0.536432 1_2:-66002663 Msa0085720:CDS
CTTGACTACAGTAAATATCC+TGG 0.536643 1_2:-65999796 Msa0085720:intron
CTCTGAAATATCATCTTTGG+TGG 0.538937 1_2:-66000361 Msa0085720:CDS
GATTCCCGCAGTCAAGGATC+CGG 0.540987 1_2:-66001443 Msa0085720:CDS
TTGCAAGTGATTCCATTGAA+AGG 0.546711 1_2:-66002558 Msa0085720:CDS
ACAAAGAATATGCAAGGCAG+AGG 0.550525 1_2:-65999271 Msa0085720:CDS
GGAGCCGGATCCTTGACTGC+GGG 0.554079 1_2:+66001439 None:intergenic
GGATTGTTGATAATGAGAAT+GGG 0.557573 1_2:-65998962 Msa0085720:three_prime_UTR
TTTGAGTGTATCTCAAAGCA+TGG 0.558795 1_2:-66002405 Msa0085720:CDS
TTGATTACAAAGAATATGCA+AGG 0.569982 1_2:-65999277 Msa0085720:CDS
AAATTGGATTCCCGCAGTCA+AGG 0.570798 1_2:-66001449 Msa0085720:CDS
CTGGAGAAGGAGTTGTGTGA+AGG 0.572508 1_2:-66000086 Msa0085720:CDS
AGTTTCGGTTTGGGCAACAA+TGG 0.574842 1_2:+65999202 None:intergenic
AATGGAAGTAATTACTGCGG+TGG 0.576381 1_2:-66002619 Msa0085720:CDS
CAAGAAACCAAGCAATGCTA+AGG 0.579970 1_2:-65999491 Msa0085720:CDS
AAATGATGGTGATTTGAGGA+AGG 0.580359 1_2:-66002493 Msa0085720:CDS
CGTGGTCGTTCGATCAAGAT+CGG 0.589761 1_2:-66001391 Msa0085720:CDS
TTTGCCAGGTCATACGCGAT+AGG 0.592819 1_2:+65999868 None:intergenic
TTTCACTACTGGTAGAGTTG+AGG 0.595164 1_2:-66002358 Msa0085720:CDS
TACCATATTGTAGGTCATTG+TGG 0.595534 1_2:+66000042 None:intergenic
GTGAAACGAGCAAGAAGGCG+TGG 0.597624 1_2:+66002375 None:intergenic
CAAAGTGTTCACATCATCGA+TGG 0.599429 1_2:+66002578 None:intergenic
TCAACAATCCCAAAAGTGGA+AGG 0.612132 1_2:+65998975 None:intergenic
TCTTGAATGCATCTCTGCAG+GGG 0.613116 1_2:+66001418 None:intergenic
GAAAAGTTTGTGCTCCCCAA+AGG 0.617608 1_2:-66000156 Msa0085720:CDS
CAGTAGTGAAACGAGCAAGA+AGG 0.618606 1_2:+66002370 None:intergenic
GTCGTTCGATCAAGATCGGA+CGG 0.623305 1_2:-66001387 Msa0085720:CDS
GCCCAAACCGAAACTGTGAA+CGG 0.623493 1_2:-65999194 Msa0085720:CDS
AAGATGATATTTCAGAGTCA+CGG 0.624385 1_2:+66000367 None:intergenic
GGGAGCCGGATCCTTGACTG+CGG 0.635491 1_2:+66001438 None:intergenic
TGTATCTCAAAGCATGGACA+AGG 0.636753 1_2:-66002399 Msa0085720:CDS
CTCGCAAACCATATATTCTG+GGG 0.653675 1_2:-65999433 Msa0085720:CDS
CAGAGTCGAGTTGAATAACG+TGG 0.657530 1_2:+66003125 None:intergenic
TAAGGTGAATCAGTTAATGA+CGG 0.658131 1_2:-65999473 Msa0085720:CDS
TTACTGTAGTCAAGAACATG+AGG 0.664678 1_2:+65999805 None:intergenic
CGATCTTGATCGAACGACCA+CGG 0.671964 1_2:+66001392 None:intergenic
AATCACACACATGATGCTAG+TGG 0.675552 1_2:+65999164 None:intergenic
ATATGGTGAACCAGAACTCG+AGG 0.681495 1_2:-65999669 Msa0085720:intron
AGATGCATTCAAGACATCCG+TGG 0.697234 1_2:-66001409 Msa0085720:CDS
ATTAATGGAAGTAATTACTG+CGG 0.713521 1_2:-66002622 Msa0085720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTTTTAAATAAAA+TGG + chr1_2:66001896-66001915 None:intergenic 0.0%
!!! ATTGGATTTTTTTATTAAAA+TGG + chr1_2:66000005-66000024 None:intergenic 10.0%
!! AAAATATTCAATAGAAAATA+AGG - chr1_2:66000567-66000586 Msa0085720:intron 10.0%
!!! TTAAATTTCTTATTTAAAGA+TGG + chr1_2:66001200-66001219 None:intergenic 10.0%
!! TCTTTAAATAAGAAATTTAA+TGG - chr1_2:66001200-66001219 Msa0085720:intron 10.0%
!! TAATATAACTAAAAAATCTA+TGG - chr1_2:66001470-66001489 Msa0085720:intron 10.0%
!! AAGTATATAACTATATATTA+TGG - chr1_2:66002774-66002793 Msa0085720:intron 10.0%
!! AGTATATAACTATATATTAT+GGG - chr1_2:66002775-66002794 Msa0085720:intron 10.0%
!! TTTGAGAAAAATAAAAAACA+GGG + chr1_2:65999187-65999206 None:intergenic 15.0%
!!! TTTTGAGAAAAATAAAAAAC+AGG + chr1_2:65999188-65999207 None:intergenic 15.0%
!!! AATTTTTTTATAACCCAATT+TGG + chr1_2:65999279-65999298 None:intergenic 15.0%
!! TTTAATTCATTGAATCAAAA+TGG - chr1_2:65999438-65999457 Msa0085720:CDS 15.0%
!! CTTCTTAACTTATAAAATTA+AGG + chr1_2:66000144-66000163 None:intergenic 15.0%
!!! ATTTTATAAGTTAAGAAGTT+AGG - chr1_2:66000146-66000165 Msa0085720:CDS 15.0%
!! ACAAAACAGTAAAATATAAT+TGG + chr1_2:66000395-66000414 None:intergenic 15.0%
!! AAATAAGAAATTTAATGGAA+CGG - chr1_2:66001205-66001224 Msa0085720:intron 15.0%
!! ATATCAATAAAAACAAAAAC+AGG + chr1_2:66002408-66002427 None:intergenic 15.0%
!!! TAAGAAGTATATTTGATATT+CGG + chr1_2:66002580-66002599 None:intergenic 15.0%
!!! TTTTTGATGATTTTTTCAAC+TGG - chr1_2:65999098-65999117 Msa0085720:three_prime_UTR 20.0%
!!! TTTTGATGATTTTTTCAACT+GGG - chr1_2:65999099-65999118 Msa0085720:three_prime_UTR 20.0%
!! TTGAGAAAAATAAAAAACAG+GGG + chr1_2:65999186-65999205 None:intergenic 20.0%
!!! TTTTGATATCTTTTCCAAAT+TGG - chr1_2:65999262-65999281 Msa0085720:CDS 20.0%
!!! TTTGATATCTTTTCCAAATT+GGG - chr1_2:65999263-65999282 Msa0085720:CDS 20.0%
!!! TATTTTATAGCCAAATCAAA+CGG - chr1_2:65999393-65999412 Msa0085720:intron 20.0%
!! CAATAATTCAATTGTCTTTA+TGG + chr1_2:65999464-65999483 None:intergenic 20.0%
!! AAGACAATTGAATTATTGAA+AGG - chr1_2:65999466-65999485 Msa0085720:CDS 20.0%
!! ATTTATCTGAAAAACTTCAT+TGG + chr1_2:65999605-65999624 None:intergenic 20.0%
!!! ATGAAGTTTTTCAGATAAAT+TGG - chr1_2:65999605-65999624 Msa0085720:intron 20.0%
!!! TGTTGAAATTTTCTTCAATA+GGG - chr1_2:65999684-65999703 Msa0085720:intron 20.0%
!!! TAATTTGTAGAACTAAAAAG+TGG - chr1_2:65999950-65999969 Msa0085720:intron 20.0%
!!! CAGAAATATTTCTATCATAT+TGG + chr1_2:66000023-66000042 None:intergenic 20.0%
!!! CTATTCTTCAATTTTGAATT+AGG + chr1_2:66000172-66000191 None:intergenic 20.0%
!!! AAAATCAATTTTGTTGCAAT+TGG - chr1_2:66000316-66000335 Msa0085720:CDS 20.0%
!!! TATTTTCTAAATTTACTTGC+AGG + chr1_2:66000525-66000544 None:intergenic 20.0%
!! TATTCAATAGAAAATAAGGT+AGG - chr1_2:66000571-66000590 Msa0085720:intron 20.0%
!! ACTAAACTAAACTAACTTAT+AGG + chr1_2:66000600-66000619 None:intergenic 20.0%
!! TATATAAAGTAGATCAAGAT+CGG + chr1_2:66000934-66000953 None:intergenic 20.0%
!! CATATTATCTTGCAAAATAA+AGG - chr1_2:66000970-66000989 Msa0085720:intron 20.0%
!! AGATAAAGGGAATAAATTAA+GGG + chr1_2:66001109-66001128 None:intergenic 20.0%
!! AAGATAAAGGGAATAAATTA+AGG + chr1_2:66001110-66001129 None:intergenic 20.0%
!!! AATTTATTCCCTTTATCTTT+TGG - chr1_2:66001111-66001130 Msa0085720:intron 20.0%
!! AGAATAAATAACATGAAGAA+AGG + chr1_2:66001298-66001317 None:intergenic 20.0%
!!! TAAACAGTATGTTTTTTGAA+AGG - chr1_2:66001352-66001371 Msa0085720:intron 20.0%
!! TAAATGTTCATTAATAGACT+TGG - chr1_2:66001447-66001466 Msa0085720:CDS 20.0%
!!! GAAAGAGTTTTACAAATAAA+AGG - chr1_2:66001630-66001649 Msa0085720:intron 20.0%
!! AGATGATGAAATAAATATTC+TGG - chr1_2:66002024-66002043 Msa0085720:intron 20.0%
!!! CATAAGTAACTATCATATTT+TGG + chr1_2:66002187-66002206 None:intergenic 20.0%
!!! CTCTAATTTTATTTTGATAC+AGG - chr1_2:66002215-66002234 Msa0085720:intron 20.0%
!!! CTGACATATTAATTTGTATA+TGG - chr1_2:66002443-66002462 Msa0085720:CDS 20.0%
!! TCTATTATAATAACAGCTAA+AGG - chr1_2:66003040-66003059 Msa0085720:intron 20.0%
!! CTTATGAATGATGATAAATT+AGG - chr1_2:66003231-66003250 Msa0085720:five_prime_UTR 20.0%
!! AGTGAATCAATACATATAAA+AGG + chr1_2:66003268-66003287 None:intergenic 20.0%
! TGTATATATAGAGAGAGAAT+TGG + chr1_2:65998909-65998928 None:intergenic 25.0%
! TCTTTGCATTAACTAATTCT+TGG - chr1_2:65999063-65999082 Msa0085720:three_prime_UTR 25.0%
! CTATTGCAATGATATTATGT+GGG + chr1_2:65999147-65999166 None:intergenic 25.0%
! ATTTATTTGTGCATGCAATA+AGG - chr1_2:65999310-65999329 Msa0085720:intron 25.0%
! TTTATTTGTGCATGCAATAA+GGG - chr1_2:65999311-65999330 Msa0085720:intron 25.0%
!!! TTGATTTGGCTATAAAATAG+TGG + chr1_2:65999392-65999411 None:intergenic 25.0%
! TACTTCCATTAATTCTTCTT+GGG + chr1_2:65999500-65999519 None:intergenic 25.0%
! TTACTTCCATTAATTCTTCT+TGG + chr1_2:65999501-65999520 None:intergenic 25.0%
! ATTAATGGAAGTAATTACTG+CGG - chr1_2:65999507-65999526 Msa0085720:intron 25.0%
!!! AAATCACCATCATTTTTTGT+TGG + chr1_2:65999631-65999650 None:intergenic 25.0%
!! GTGTTGAAATTTTCTTCAAT+AGG - chr1_2:65999683-65999702 Msa0085720:intron 25.0%
! TTGAAGTTTATCATGTACTT+TGG - chr1_2:65999883-65999902 Msa0085720:CDS 25.0%
!!! TTTTTTGCATCATGAAACTA+TGG - chr1_2:66000225-66000244 Msa0085720:intron 25.0%
! TTGACATATAAGAACCTATT+TGG - chr1_2:66000343-66000362 Msa0085720:CDS 25.0%
! TTGAATAGAACAAACCAAAT+AGG + chr1_2:66000360-66000379 None:intergenic 25.0%
! GAAAAATTTCTTGCAATGAA+TGG - chr1_2:66000879-66000898 Msa0085720:intron 25.0%
! GCAAGATAATATGTTATGTT+GGG + chr1_2:66000963-66000982 None:intergenic 25.0%
! TGCAAGATAATATGTTATGT+TGG + chr1_2:66000964-66000983 None:intergenic 25.0%
! TGATCTCAAAAGCTAAAATA+TGG + chr1_2:66001014-66001033 None:intergenic 25.0%
! TAACATGAAGAAAGGAATAT+GGG + chr1_2:66001290-66001309 None:intergenic 25.0%
! ATAACATGAAGAAAGGAATA+TGG + chr1_2:66001291-66001310 None:intergenic 25.0%
! GCATGCTTCTTTATTATTAT+TGG + chr1_2:66001322-66001341 None:intergenic 25.0%
! TATGTATGCATAGAATGATA+AGG - chr1_2:66001391-66001410 Msa0085720:CDS 25.0%
! CTAAAAAATCTATGGAACTA+AGG - chr1_2:66001478-66001497 Msa0085720:intron 25.0%
! AATTTCTGTGTCTGTAAAAA+AGG + chr1_2:66001510-66001529 None:intergenic 25.0%
! TAAAAAGGAACACATTAAAC+AGG + chr1_2:66001563-66001582 None:intergenic 25.0%
!!! GAATTTTTTTGTTTCCTTTG+GGG + chr1_2:66001990-66002009 None:intergenic 25.0%
!!! CGAATTTTTTTGTTTCCTTT+GGG + chr1_2:66001991-66002010 None:intergenic 25.0%
! CCAAAGGAAACAAAAAAATT+CGG - chr1_2:66001989-66002008 Msa0085720:intron 25.0%
! CAAAGGAAACAAAAAAATTC+GGG - chr1_2:66001990-66002009 Msa0085720:intron 25.0%
!! TGAAATAAATATTCTGGAGA+AGG - chr1_2:66002030-66002049 Msa0085720:intron 25.0%
! TCATAATGTTACCATATTGT+AGG + chr1_2:66002099-66002118 None:intergenic 25.0%
! ACAATATGGTAACATTATGA+TGG - chr1_2:66002099-66002118 Msa0085720:intron 25.0%
!!! GTAACTATCATATTTTGGAA+AGG + chr1_2:66002182-66002201 None:intergenic 25.0%
! CTAAGAACAAAAAATTTACC+AGG + chr1_2:66002354-66002373 None:intergenic 25.0%
! TACAAATTAATATGTCAGCA+AGG + chr1_2:66002441-66002460 None:intergenic 25.0%
! TTGATTACAAAGAATATGCA+AGG - chr1_2:66002852-66002871 Msa0085720:intron 25.0%
!! TTTTCTTTGTAATGAAGTCT+TGG - chr1_2:66003200-66003219 Msa0085720:five_prime_UTR 25.0%
CCAAATATACGCACTTTAAA+CGG - chr1_2:65998837-65998856 Msa0085720:three_prime_UTR 30.0%
AATAACGTGGTTAAGTGATA+AGG + chr1_2:65998994-65999013 None:intergenic 30.0%
CCTATTGCAATGATATTATG+TGG + chr1_2:65999148-65999167 None:intergenic 30.0%
CCACATAATATCATTGCAAT+AGG - chr1_2:65999145-65999164 Msa0085720:three_prime_UTR 30.0%
! TCTGAAACAGAGTAAATACA+GGG + chr1_2:65999367-65999386 None:intergenic 30.0%
! ATCTGAAACAGAGTAAATAC+AGG + chr1_2:65999368-65999387 None:intergenic 30.0%
AATTGGCCAACAAAAAATGA+TGG - chr1_2:65999622-65999641 Msa0085720:intron 30.0%
! CAAAAAATGATGGTGATTTG+AGG - chr1_2:65999632-65999651 Msa0085720:CDS 30.0%
GATAAGAAAATCACATACTC+TGG + chr1_2:65999809-65999828 None:intergenic 30.0%
!!! TGCAGCAAATTATTTTTGCT+GGG - chr1_2:66000041-66000060 Msa0085720:CDS 30.0%
CTGGGTAGGTAATATAATTA+GGG - chr1_2:66000059-66000078 Msa0085720:CDS 30.0%
!! TTTGATTGCTTTGAGAAGAT+AGG - chr1_2:66000262-66000281 Msa0085720:intron 30.0%
! GTCAAGACAAGTTCTTTTAT+TGG - chr1_2:66000630-66000649 Msa0085720:intron 30.0%
! AGACAAGTTCTTTTATTGGT+AGG - chr1_2:66000634-66000653 Msa0085720:intron 30.0%
TTTGTCTTTCCAATCAGAAT+CGG - chr1_2:66000815-66000834 Msa0085720:intron 30.0%
! CATTGCAAGAAATTTTTCTG+CGG + chr1_2:66000877-66000896 None:intergenic 30.0%
AGGGAATAAATTAAGGGAAA+AGG + chr1_2:66001103-66001122 None:intergenic 30.0%
!! TTTGTCTCTTTTGGTTGTTT+TGG - chr1_2:66001152-66001171 Msa0085720:intron 30.0%
CAGTTAACAAATTAGTATGC+TGG + chr1_2:66001533-66001552 None:intergenic 30.0%
TCTAGAAAGCCAAAAACAAT+TGG + chr1_2:66001723-66001742 None:intergenic 30.0%
AAGATGATATTTCAGAGTCA+CGG + chr1_2:66001765-66001784 None:intergenic 30.0%
!! TGACTCTGAAATATCATCTT+TGG - chr1_2:66001765-66001784 Msa0085720:intron 30.0%
! TGTTTTCCATGTGTTTTACT+AGG - chr1_2:66001933-66001952 Msa0085720:intron 30.0%
!!! CCGAATTTTTTTGTTTCCTT+TGG + chr1_2:66001992-66002011 None:intergenic 30.0%
TCACACTAATTGTAAGCTAA+TGG - chr1_2:66002140-66002159 Msa0085720:intron 30.0%
TAAGGTGAATCAGTTAATGA+CGG - chr1_2:66002656-66002675 Msa0085720:CDS 30.0%
!! TGTCTTAGTGAAGTTAGTTT+TGG - chr1_2:66003005-66003024 Msa0085720:intron 30.0%
ATTATCAACAATCCCAAAAG+TGG + chr1_2:66003161-66003180 None:intergenic 30.0%
!! GGATTGTTGATAATGAGAAT+GGG - chr1_2:66003167-66003186 Msa0085720:five_prime_UTR 30.0%
! CCGTTTAAAGTGCGTATATT+TGG + chr1_2:65998840-65998859 None:intergenic 35.0%
CTGAAACAGAGTAAATACAG+GGG + chr1_2:65999366-65999385 None:intergenic 35.0%
ACCAGAATTTCCGTTTGATT+TGG + chr1_2:65999406-65999425 None:intergenic 35.0%
TGCATCCCAAGAAGAATTAA+TGG - chr1_2:65999492-65999511 Msa0085720:CDS 35.0%
TTGCAAGTGATTCCATTGAA+AGG - chr1_2:65999571-65999590 Msa0085720:intron 35.0%
! AAATGATGGTGATTTGAGGA+AGG - chr1_2:65999636-65999655 Msa0085720:CDS 35.0%
!! AAGGTTCTGGTTCGTTTATA+TGG - chr1_2:65999655-65999674 Msa0085720:CDS 35.0%
TTTGAGTGTATCTCAAAGCA+TGG - chr1_2:65999724-65999743 Msa0085720:intron 35.0%
!!! CTGCAGCAAATTATTTTTGC+TGG - chr1_2:66000040-66000059 Msa0085720:CDS 35.0%
!!! GCAAATTATTTTTGCTGGGT+AGG - chr1_2:66000045-66000064 Msa0085720:CDS 35.0%
GCTGGGTAGGTAATATAATT+AGG - chr1_2:66000058-66000077 Msa0085720:CDS 35.0%
! GAATCCAATTTCCTCTAAGA+GGG + chr1_2:66000671-66000690 None:intergenic 35.0%
GTTAATGAGAACACCTATTC+AGG + chr1_2:66000855-66000874 None:intergenic 35.0%
AATGAATGGAAACACGCATT+CGG - chr1_2:66000893-66000912 Msa0085720:intron 35.0%
TAAAGTAGATCAAGATCGGA+CGG + chr1_2:66000930-66000949 None:intergenic 35.0%
CCATTGCTCCAAAAGATAAA+GGG + chr1_2:66001122-66001141 None:intergenic 35.0%
TCCATTGCTCCAAAAGATAA+AGG + chr1_2:66001123-66001142 None:intergenic 35.0%
!!! TTTATCTTTTGGAGCAATGG+AGG - chr1_2:66001122-66001141 Msa0085720:intron 35.0%
!!! TTATCTTTTGGAGCAATGGA+GGG - chr1_2:66001123-66001142 Msa0085720:intron 35.0%
AGGAATATGGGCAAAAAGAA+TGG + chr1_2:66001278-66001297 None:intergenic 35.0%
GACGTCAACAACAGATAAAA+AGG + chr1_2:66001578-66001597 None:intergenic 35.0%
! CTTGCTTCTCCAATTGTTTT+TGG - chr1_2:66001711-66001730 Msa0085720:intron 35.0%
!! CTCTGAAATATCATCTTTGG+TGG - chr1_2:66001768-66001787 Msa0085720:intron 35.0%
! CATGTGTTTTACTAGGAACT+GGG - chr1_2:66001940-66001959 Msa0085720:intron 35.0%
TGTGAAGGATATCAAGAGAT+TGG - chr1_2:66002058-66002077 Msa0085720:intron 35.0%
TACCATATTGTAGGTCATTG+TGG + chr1_2:66002090-66002109 None:intergenic 35.0%
! TTTCACAGAAATGATTTGCC+AGG + chr1_2:66002278-66002297 None:intergenic 35.0%
GGCAAATCATTTCTGTGAAA+TGG - chr1_2:66002278-66002297 Msa0085720:intron 35.0%
TTACTGTAGTCAAGAACATG+AGG + chr1_2:66002327-66002346 None:intergenic 35.0%
CTTGACTACAGTAAATATCC+TGG - chr1_2:66002333-66002352 Msa0085720:intron 35.0%
GGAACACACAATAATCATTG+TGG + chr1_2:66002387-66002406 None:intergenic 35.0%
CGACAGAGTGAAATTCATAA+TGG + chr1_2:66002531-66002550 None:intergenic 35.0%
TACAATCACTCTTTGTACAC+AGG - chr1_2:66002615-66002634 Msa0085720:CDS 35.0%
TCTCGCAAACCATATATTCT+GGG - chr1_2:66002695-66002714 Msa0085720:five_prime_UTR 35.0%
! GGTTTCAGCAATATTGGTTA+AGG - chr1_2:66002879-66002898 Msa0085720:intron 35.0%
GTTAAGGAAGCCTACTTTAT+TGG - chr1_2:66002895-66002914 Msa0085720:intron 35.0%
! GTTGATGAGTCCAATAAAGT+AGG + chr1_2:66002908-66002927 None:intergenic 35.0%
!! GGGATTGTTGATAATGAGAA+TGG - chr1_2:66003166-66003185 Msa0085720:five_prime_UTR 35.0%
! ACTCGACTCTGTTTCTTCTT+CGG - chr1_2:65999016-65999035 Msa0085720:three_prime_UTR 40.0%
GCCAAATCAAACGGAAATTC+TGG - chr1_2:65999402-65999421 Msa0085720:intron 40.0%
AATGGAAGTAATTACTGCGG+TGG - chr1_2:65999510-65999529 Msa0085720:intron 40.0%
! CAAAGTGTTCACATCATCGA+TGG + chr1_2:65999554-65999573 None:intergenic 40.0%
TTGGTCATTGCACCTTTCAA+TGG + chr1_2:65999586-65999605 None:intergenic 40.0%
TGTATCTCAAAGCATGGACA+AGG - chr1_2:65999730-65999749 Msa0085720:intron 40.0%
TTTCACTACTGGTAGAGTTG+AGG - chr1_2:65999771-65999790 Msa0085720:intron 40.0%
TTACCTATAAGCCCTCTTAG+AGG - chr1_2:66000657-66000676 Msa0085720:intron 40.0%
! TTTCCTCTAAGAGGGCTTAT+AGG + chr1_2:66000663-66000682 None:intergenic 40.0%
TAAGCCCTCTTAGAGGAAAT+TGG - chr1_2:66000664-66000683 Msa0085720:intron 40.0%
GGAATCCAATTTCCTCTAAG+AGG + chr1_2:66000672-66000691 None:intergenic 40.0%
GATGACTTTCCGATTCTGAT+TGG + chr1_2:66000827-66000846 None:intergenic 40.0%
AAGTCATCGATGTCCTGAAT+AGG - chr1_2:66000839-66000858 Msa0085720:intron 40.0%
ATGAATGGAAACACGCATTC+GGG - chr1_2:66000894-66000913 Msa0085720:intron 40.0%
!!! CCCTTTATCTTTTGGAGCAA+TGG - chr1_2:66001119-66001138 Msa0085720:intron 40.0%
! GGGCTATCATTTGTCTCTTT+TGG - chr1_2:66001143-66001162 Msa0085720:intron 40.0%
! ATGGAACGGTATTGAGTCAA+TGG - chr1_2:66001219-66001238 Msa0085720:intron 40.0%
! ACGGTATTGAGTCAATGGAA+TGG - chr1_2:66001224-66001243 Msa0085720:intron 40.0%
GAATGGAATCATGTGCTCTT+AGG - chr1_2:66001241-66001260 Msa0085720:intron 40.0%
!! TTTGGCTTTCTAGACTCTCT+CGG - chr1_2:66001729-66001748 Msa0085720:intron 40.0%
TTCCATAAGCTTCATATGCC+TGG - chr1_2:66001808-66001827 Msa0085720:intron 40.0%
GCACAAAGAAGGCTCATATT+TGG - chr1_2:66001830-66001849 Msa0085720:intron 40.0%
CTCATATTTGGCAGAGAATG+AGG - chr1_2:66001842-66001861 Msa0085720:intron 40.0%
CCAGTTCCTAGTAAAACACA+TGG + chr1_2:66001942-66001961 None:intergenic 40.0%
! CCATGTGTTTTACTAGGAAC+TGG - chr1_2:66001939-66001958 Msa0085720:intron 40.0%
! TGTTTTACTAGGAACTGGGT+TGG - chr1_2:66001944-66001963 Msa0085720:intron 40.0%
GGAAACAAAAAAATTCGGGC+TGG - chr1_2:66001994-66002013 Msa0085720:intron 40.0%
TGCCACAATGACCTACAATA+TGG - chr1_2:66002085-66002104 Msa0085720:intron 40.0%
GAACATGAGGTGTATCACTA+TGG + chr1_2:66002314-66002333 None:intergenic 40.0%
CAAGAAACCAAGCAATGCTA+AGG - chr1_2:66002638-66002657 Msa0085720:CDS 40.0%
TGATTCACCTTAGCATTGCT+TGG + chr1_2:66002648-66002667 None:intergenic 40.0%
CTCTCGCAAACCATATATTC+TGG - chr1_2:66002694-66002713 Msa0085720:exon 40.0%
CTCGCAAACCATATATTCTG+GGG - chr1_2:66002696-66002715 Msa0085720:five_prime_UTR 40.0%
!! ACCATATATTCTGGGGCTTA+TGG - chr1_2:66002703-66002722 Msa0085720:five_prime_UTR 40.0%
!! CCATATATTCTGGGGCTTAT+GGG - chr1_2:66002704-66002723 Msa0085720:five_prime_UTR 40.0%
!! CATATATTCTGGGGCTTATG+GGG - chr1_2:66002705-66002724 Msa0085720:five_prime_UTR 40.0%
ACAAAGAATATGCAAGGCAG+AGG - chr1_2:66002858-66002877 Msa0085720:intron 40.0%
AATCACACACATGATGCTAG+TGG + chr1_2:66002968-66002987 None:intergenic 40.0%
!! CTCATCAACCTTCCACTTTT+GGG - chr1_2:66003146-66003165 Msa0085720:five_prime_UTR 40.0%
TCAACAATCCCAAAAGTGGA+AGG + chr1_2:66003157-66003176 None:intergenic 40.0%
!! CAGAGTCGAGTTGAATAACG+TGG + chr1_2:65999007-65999026 None:intergenic 45.0%
! CTCGACTCTGTTTCTTCTTC+GGG - chr1_2:65999017-65999036 Msa0085720:three_prime_UTR 45.0%
AGTAATTACTGCGGTGGCTT+CGG - chr1_2:65999516-65999535 Msa0085720:intron 45.0%
TGGTGATTTGAGGAAGGTTC+TGG - chr1_2:65999642-65999661 Msa0085720:CDS 45.0%
! CTGGTTCGTTTATATGGCGA+AGG - chr1_2:65999661-65999680 Msa0085720:intron 45.0%
CAGTAGTGAAACGAGCAAGA+AGG + chr1_2:65999762-65999781 None:intergenic 45.0%
CTTCTTGCTCGTTTCACTAC+TGG - chr1_2:65999760-65999779 Msa0085720:intron 45.0%
AAATTGGATTCCCGCAGTCA+AGG - chr1_2:66000680-66000699 Msa0085720:intron 45.0%
TCTTGAATGCATCTCTGCAG+GGG + chr1_2:66000714-66000733 None:intergenic 45.0%
GTCTTGAATGCATCTCTGCA+GGG + chr1_2:66000715-66000734 None:intergenic 45.0%
TGTCTTGAATGCATCTCTGC+AGG + chr1_2:66000716-66000735 None:intergenic 45.0%
AGATGCATTCAAGACATCCG+TGG - chr1_2:66000720-66000739 Msa0085720:intron 45.0%
GACGGTCAAGATTCAAGCTT+TGG - chr1_2:66000760-66000779 Msa0085720:intron 45.0%
TGCCAGGCATATGAAGCTTA+TGG + chr1_2:66001813-66001832 None:intergenic 45.0%
TCATATGCCTGGCACAAAGA+AGG - chr1_2:66001819-66001838 Msa0085720:intron 45.0%
ATATGAGCCTTCTTTGTGCC+AGG + chr1_2:66001829-66001848 None:intergenic 45.0%
GAAAAGTTTGTGCTCCCCAA+AGG - chr1_2:66001973-66001992 Msa0085720:intron 45.0%
ATATGGTGAACCAGAACTCG+AGG - chr1_2:66002460-66002479 Msa0085720:CDS 45.0%
! CGTGTCTATCTCAGTTCTGA+AGG - chr1_2:66002500-66002519 Msa0085720:CDS 45.0%
CCCATAAGCCCCAGAATATA+TGG + chr1_2:66002707-66002726 None:intergenic 45.0%
GGGCTTATGGGGACTTATTT+CGG - chr1_2:66002716-66002735 Msa0085720:five_prime_UTR 45.0%
GGCAGAGGTTTCAGCAATAT+TGG - chr1_2:66002873-66002892 Msa0085720:intron 45.0%
!! AGTTTCGGTTTGGGCAACAA+TGG + chr1_2:66002930-66002949 None:intergenic 45.0%
ACCGTTCACAGTTTCGGTTT+GGG + chr1_2:66002939-66002958 None:intergenic 45.0%
AACCGTTCACAGTTTCGGTT+TGG + chr1_2:66002940-66002959 None:intergenic 45.0%
! GCTCATCAACCTTCCACTTT+TGG - chr1_2:66003145-66003164 Msa0085720:five_prime_UTR 45.0%
!! TATAATATAGATATAAAAAA+AGG + chr1_2:65999831-65999850 None:intergenic 5.0%
!!! TTTATATCTATATTATATTT+TGG - chr1_2:65999834-65999853 Msa0085720:CDS 5.0%
CGATCTTGATCGAACGACCA+CGG + chr1_2:66000740-66000759 None:intergenic 50.0%
CGTGGTCGTTCGATCAAGAT+CGG - chr1_2:66000738-66000757 Msa0085720:intron 50.0%
GTCGTTCGATCAAGATCGGA+CGG - chr1_2:66000742-66000761 Msa0085720:intron 50.0%
CTGGAGAAGGAGTTGTGTGA+AGG - chr1_2:66002043-66002062 Msa0085720:intron 50.0%
CAATCCTATCGCGTATGACC+TGG - chr1_2:66002257-66002276 Msa0085720:intron 50.0%
TTTGCCAGGTCATACGCGAT+AGG + chr1_2:66002264-66002283 None:intergenic 50.0%
GCCCAAACCGAAACTGTGAA+CGG - chr1_2:66002935-66002954 Msa0085720:intron 50.0%
CAGCGAACCGTTCACAGTTT+CGG + chr1_2:66002945-66002964 None:intergenic 50.0%
ACTGCGGTGGCTTCGGATTT+AGG - chr1_2:65999523-65999542 Msa0085720:intron 55.0%
GTGAAACGAGCAAGAAGGCG+TGG + chr1_2:65999757-65999776 None:intergenic 55.0%
GATTCCCGCAGTCAAGGATC+CGG - chr1_2:66000686-66000705 Msa0085720:intron 55.0%
CTTTGACGCTCCTCGAGTTC+TGG + chr1_2:66002473-66002492 None:intergenic 55.0%
!! CAGAACTCGAGGAGCGTCAA+AGG - chr1_2:66002471-66002490 Msa0085720:CDS 55.0%
ATGCATCTCTGCAGGGGAGC+CGG + chr1_2:66000708-66000727 None:intergenic 60.0%
GGAGCCGGATCCTTGACTGC+GGG + chr1_2:66000693-66000712 None:intergenic 65.0%
GGGAGCCGGATCCTTGACTG+CGG + chr1_2:66000694-66000713 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 65998830 66003321 65998830 ID=Msa0085720;Name=Msa0085720
chr1_2 mRNA 65998830 66003321 65998830 ID=Msa0085720-mRNA-1;Parent=Msa0085720;Name=Msa0085720-mRNA-1;_AED=0.27;_eAED=0.27;_QI=280|0.87|0.88|1|0.87|0.77|9|336|399
chr1_2 exon 65998830 65999321 65998830 ID=Msa0085720-mRNA-1:exon:22349;Parent=Msa0085720-mRNA-1
chr1_2 exon 65999414 65999514 65999414 ID=Msa0085720-mRNA-1:exon:22348;Parent=Msa0085720-mRNA-1
chr1_2 exon 65999630 65999677 65999630 ID=Msa0085720-mRNA-1:exon:22347;Parent=Msa0085720-mRNA-1
chr1_2 exon 65999797 65999914 65999797 ID=Msa0085720-mRNA-1:exon:22346;Parent=Msa0085720-mRNA-1
chr1_2 exon 66000001 66000196 66000001 ID=Msa0085720-mRNA-1:exon:22345;Parent=Msa0085720-mRNA-1
chr1_2 exon 66000288 66000409 66000288 ID=Msa0085720-mRNA-1:exon:22344;Parent=Msa0085720-mRNA-1
chr1_2 exon 66001370 66001474 66001370 ID=Msa0085720-mRNA-1:exon:22343;Parent=Msa0085720-mRNA-1
chr1_2 exon 66002341 66002765 66002341 ID=Msa0085720-mRNA-1:exon:22342;Parent=Msa0085720-mRNA-1
chr1_2 exon 66003113 66003321 66003113 ID=Msa0085720-mRNA-1:exon:22341;Parent=Msa0085720-mRNA-1
chr1_2 five_prime_UTR 66003113 66003321 66003113 ID=Msa0085720-mRNA-1:five_prime_utr;Parent=Msa0085720-mRNA-1
chr1_2 five_prime_UTR 66002695 66002765 66002695 ID=Msa0085720-mRNA-1:five_prime_utr;Parent=Msa0085720-mRNA-1
chr1_2 CDS 66002341 66002694 66002341 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 66001370 66001474 66001370 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 66000288 66000409 66000288 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 66000001 66000196 66000001 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 65999797 65999914 65999797 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 65999630 65999677 65999630 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 65999414 65999514 65999414 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 CDS 65999166 65999321 65999166 ID=Msa0085720-mRNA-1:cds;Parent=Msa0085720-mRNA-1
chr1_2 three_prime_UTR 65998830 65999165 65998830 ID=Msa0085720-mRNA-1:three_prime_utr;Parent=Msa0085720-mRNA-1
Gene Sequence

>Msa0085720

ATGGCCATAAAGACAATTGAATTATTGAAAGGATCTGCATCCCAAGAAGAATTAATGGAAGTAATTACTGCGGTGGCTTCGGATTTAGGAGATGCCATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATTTGAGGAAGGTTCTGGTTCGTTTATATGGCGAAGGTGTTGAAATTTTCTTCAATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAGCATGGACAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTAGAGTTGAGGAGTTTATTCATGCCAGAAGGAAATTGGATTCCCGCAGTCAAGGATCCGGCTCCCCTGCAGAGATGCATTCAAGACATCCGTGGTCGTTCGATCAAGATCGGACGGTCAAGATTCAAGCTTTGACTCTCTCGGCTGTTGATCTCCGTGACTCTGAAATATCATCTTTGGTGGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGCACAAAGAAGGCTCATATTTGGCAGAGAATGAGGAACTGGGTTGGTGAAGCGAAAAGTTTGTGCTCCCCAAAGGAAACAAAAAAATTCGGGCTGGACAATCTAGATGATGAAATAAATATTCTGGAGAAGGAGTTGTGTGAAGGATATCAAGAGATTGGTTTTTGCCACAATGACCTACAATATGGTAACATTATGATGGATGAAGAAACTAGATCAATCACACTAATTGACTACGAATACGCGAGTTACAATCCTATCGCGTATGACCTGGCAAATCATTTCTGTGAAATGGCAGCAGATTACCATAGTGATACACCTCATGTTCTTGACTACAGTAAATATCCTGAACTCGAGGAGCGTCAAAGGTTCATTCGTGTCTATCTCAGTTCTGAAGGCAAGAAACCAAGCAATGCTAAGGTGAATCAGTTAATGACGGCTGTAGAAAAATATACTCTCGCAAACCATATATTCTGGGGCTTATGGGGACTTATTTCGAGTTATGTGAATAAAATTGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAATATTGGTTAAGGAAGCCTACTTTATTGGACTCATCAACCATTGTTGCCCAAACCGAAACTGTGAACGGTTCGCTGCCACTAGCATCATGTGTGTGA

Protein sequence

>Msa0085720

MAIKTIELLKGSASQEELMEVITAVASDLGDAIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFNRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARRKLDSRSQGSGSPAEMHSRHPWSFDQDRTVKIQALTLSAVDLRDSEISSLVASKMREFHKLHMPGTKKAHIWQRMRNWVGEAKSLCSPKETKKFGLDNLDDEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYSKYPELEERQRFIRVYLSSEGKKPSNAKVNQLMTAVEKYTLANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDSSTIVAQTETVNGSLPLASCV*