AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0752300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752300 MtrunA17_Chr5g0393641 98.990 99 1 0 130 228 125 223 8.08e-27 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 147 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGATGGTTGGATTAGTATT+TGG 0.211086 5_2:+5903981 Msa0752300:CDS
GAGAATGGTGGAGGTGAGGC+AGG 0.243796 5_2:-5901492 None:intergenic
GGTGGTGCTGGAGATGAGTT+TGG 0.260123 5_2:-5901219 None:intergenic
CGTTTGTGACATTCCATTAT+CGG 0.278164 5_2:+5900816 Msa0752300:five_prime_UTR
GGAGGAGTGAGTGGGGTTGG+AGG 0.298635 5_2:-5901432 None:intergenic
CTCACTGTGATAACCGATAA+TGG 0.317247 5_2:-5900829 None:intergenic
GGGAGGTGGATGGAGCTTGT+TGG 0.323002 5_2:-5901197 None:intergenic
GTGGTGCTGGAGATGAGTTT+GGG 0.326325 5_2:-5901218 None:intergenic
TACATACATAATTACATATA+CGG 0.335636 5_2:+5900904 Msa0752300:five_prime_UTR
ATTCTTGAGACATTCATTTC+AGG 0.339733 5_2:+5904141 Msa0752300:three_prime_UTR
GTTGCTGGAGGTGGAGTTGC+GGG 0.342550 5_2:-5901537 None:intergenic
GGGGAGGCTTGAGGAGTGGT+TGG 0.345280 5_2:-5901264 None:intergenic
AGTGGACTGAGCTGGTGGAG+GGG 0.345641 5_2:-5901346 None:intergenic
GCGGGAGCTGGAGTGGTTGC+TGG 0.347245 5_2:-5901600 None:intergenic
GGAGGTGGATGGAGCTTGTT+GGG 0.351801 5_2:-5901196 None:intergenic
GTTGCGGGAGGTGGAGTAGC+AGG 0.362408 5_2:-5901522 None:intergenic
GGAGGTGGAGTTGCGGGAGG+TGG 0.365057 5_2:-5901531 None:intergenic
GGGCACACATCATATAGTTT+TGG 0.373727 5_2:+5901134 Msa0752300:CDS
TGGAGATGAGTTTGGGGAGG+TGG 0.375955 5_2:-5901211 None:intergenic
TGGCATGGGAGAGGTTAAAT+AGG 0.377498 5_2:-5900940 None:intergenic
GGTGGAGGAGTGAGTGGGGT+TGG 0.384797 5_2:-5901435 None:intergenic
GGAGTGGACTGAGCTGGTGG+AGG 0.388176 5_2:-5901348 None:intergenic
CTCTTAAGCTTGGCAGGAGC+GGG 0.396891 5_2:-5901618 None:intergenic
ATATAACCTGCGCATGCAAC+TGG 0.397299 5_2:-5901047 None:intergenic
GGAGGAGGAGATTGCTGAAC+TGG 0.403376 5_2:-5901414 None:intergenic
GAGATTAAGCTGGAAATGTT+TGG 0.403651 5_2:+5900849 Msa0752300:five_prime_UTR
GACTTAAGAGTTTGTTGGCA+TGG 0.408106 5_2:-5900955 None:intergenic
GGTGGAGGGGAGGACTGAAC+TGG 0.408526 5_2:-5901333 None:intergenic
AATGGTGGAGGTGAGGCAGG+GGG 0.411793 5_2:-5901489 None:intergenic
GGAGTGAGTGGGGTTGGAGG+AGG 0.412037 5_2:-5901429 None:intergenic
AGAGAAGAGAGTCCGGGAGC+GGG 0.413239 5_2:-5901684 None:intergenic
GAGTGGACTGAGCTGGTGGA+GGG 0.415952 5_2:-5901347 None:intergenic
GGTGTATTAGCAGGAGGAGT+GGG 0.419095 5_2:-5901240 None:intergenic
GCTTTACTCTTAAGCTTGGC+AGG 0.421108 5_2:-5901624 None:intergenic
GCAGGAGGAGTGGGTGGTGC+TGG 0.425989 5_2:-5901231 None:intergenic
TTGAAGACTTAAGAGTTTGT+TGG 0.426651 5_2:-5900960 None:intergenic
AGCTTGGCAGGAGCGGGAGC+TGG 0.429818 5_2:-5901612 None:intergenic
GAGGCTTGAGGAGTGGTTGG+AGG 0.431331 5_2:-5901261 None:intergenic
AGCTTGTTGGGCTCCTACGC+TGG 0.431825 5_2:-5901184 None:intergenic
GTGGTTGGAGGTGTATTAGC+AGG 0.434184 5_2:-5901249 None:intergenic
AGAAGATTGAACAGGTGGAG+GGG 0.439354 5_2:-5901283 None:intergenic
GGTACCAGAGGGAGAGATAG+AGG 0.440833 5_2:-5901712 None:intergenic
GGAGGAGATGAGAGAGGAGT+AGG 0.444838 5_2:-5901579 None:intergenic
GAATGGTGGAGGTGAGGCAG+GGG 0.448327 5_2:-5901490 None:intergenic
ACTGGTGGTGGAGCGGATAC+AGG 0.448600 5_2:-5901396 None:intergenic
TTCTTGAGACATTCATTTCA+GGG 0.448618 5_2:+5904142 Msa0752300:three_prime_UTR
AGGAGAGAATGGTGGAGGTG+AGG 0.448761 5_2:-5901496 None:intergenic
GAGAAGATTGAACAGGTGGA+GGG 0.453077 5_2:-5901284 None:intergenic
ATAAACATGGTTGTGGTAAA+GGG 0.460444 5_2:-5904387 None:intergenic
GGAGGAGGAGTTGCTGGAGG+TGG 0.464095 5_2:-5901546 None:intergenic
CCATCAGATGCTCCCGCTCC+CGG 0.465627 5_2:+5901672 Msa0752300:CDS
GGAGAAGATTGAACAGGTGG+AGG 0.466956 5_2:-5901285 None:intergenic
GATGAGTTTGGGGAGGTGGA+TGG 0.470184 5_2:-5901207 None:intergenic
AGAGTACAGGTGCCAATGTA+GGG 0.471479 5_2:-5901647 None:intergenic
AGAATGGTGGAGGTGAGGCA+GGG 0.471635 5_2:-5901491 None:intergenic
AGGTTAAATAGGCAGGATAT+AGG 0.475253 5_2:-5900929 None:intergenic
ATAAATCAAGACAATTAAGA+TGG 0.490920 5_2:+5901113 Msa0752300:exon
GCGGGAGGTGGAGTAGCAGG+GGG 0.491257 5_2:-5901519 None:intergenic
AGTGCCGGAGGAGGAGTTGC+TGG 0.491583 5_2:-5901552 None:intergenic
ACTTAAGAGTTTGTTGGCAT+GGG 0.492063 5_2:-5900954 None:intergenic
GAGAGTACAGGTGCCAATGT+AGG 0.499124 5_2:-5901648 None:intergenic
ACCTCCAGCAACTCCTCCTC+CGG 0.499715 5_2:+5901548 Msa0752300:CDS
GGCAGGAGCGGGAGCTGGAG+TGG 0.502540 5_2:-5901607 None:intergenic
GCATCTGATGGCGAGAGTAC+AGG 0.502597 5_2:-5901660 None:intergenic
GGAGAAGACTGAACGGGAGG+GGG 0.504581 5_2:-5901369 None:intergenic
GGGGAGAGAGAAGAGAGTCC+GGG 0.504838 5_2:-5901690 None:intergenic
GGGGAGGACTGAACTGGAGG+TGG 0.505376 5_2:-5901327 None:intergenic
ACGTGGGGAGACTCTACAAC+AGG 0.507489 5_2:+5904328 Msa0752300:three_prime_UTR
GAAGTTGTGGTCACATAAGA+TGG 0.507746 5_2:+5903965 Msa0752300:CDS
GGAGAAGACTGCACGGGTGG+AGG 0.508426 5_2:-5901306 None:intergenic
GTACCAGAGGGAGAGATAGA+GGG 0.516796 5_2:-5901711 None:intergenic
TGCGGGAGGTGGAGTAGCAG+GGG 0.516905 5_2:-5901520 None:intergenic
GGACTGAGCTGGTGGAGGGG+AGG 0.519909 5_2:-5901343 None:intergenic
TGGAGGGGAGGCTTGAGGAG+TGG 0.522970 5_2:-5901268 None:intergenic
TTTACGTAGTTCTGTAACGT+GGG 0.527539 5_2:+5904312 Msa0752300:three_prime_UTR
AGAGTTTGTTGGCATGGGAG+AGG 0.528931 5_2:-5900949 None:intergenic
AACCTGCGCATGCAACTGGC+AGG 0.529095 5_2:-5901043 None:intergenic
GAGAGAAGAGAGTCCGGGAG+CGG 0.529145 5_2:-5901685 None:intergenic
GGAGGGGAGGACTGAACTGG+AGG 0.529701 5_2:-5901330 None:intergenic
TGGTGCTGGAGATGAGTTTG+GGG 0.531907 5_2:-5901217 None:intergenic
ATGGGAGAGGTTAAATAGGC+AGG 0.534071 5_2:-5900936 None:intergenic
GAGAAAATAATAATATATAG+AGG 0.534434 5_2:-5904077 None:intergenic
AGGAGAAGACTGAACGGGAG+GGG 0.536416 5_2:-5901370 None:intergenic
GGTGGAGAAGACTGCACGGG+TGG 0.537106 5_2:-5901309 None:intergenic
AAAAGAAAGCAACGAATGGA+TGG 0.538134 5_2:-5904224 None:intergenic
GGAGGAGAAGATTGAACAGG+TGG 0.538673 5_2:-5901288 None:intergenic
GGAGGAGAAGACTGAACGGG+AGG 0.539000 5_2:-5901372 None:intergenic
CGATCTAGAACAGCAAGGAC+AGG 0.539363 5_2:-5904013 None:intergenic
GGTGGAGGAGAAGACTGAAC+GGG 0.540730 5_2:-5901375 None:intergenic
GGAGTAGGTGTGAGTGCCGG+AGG 0.541820 5_2:-5901564 None:intergenic
TTGTGGTCACATAAGATGGT+TGG 0.542769 5_2:+5903969 Msa0752300:CDS
ACTCTTAAGCTTGGCAGGAG+CGG 0.544295 5_2:-5901619 None:intergenic
TTGCGGGAGGTGGAGTAGCA+GGG 0.544392 5_2:-5901521 None:intergenic
GGTGGAGGAGAAGATTGAAC+AGG 0.545453 5_2:-5901291 None:intergenic
AGTTGCTGGAGGTGGAGTTG+CGG 0.545853 5_2:-5901538 None:intergenic
GGATCCACCAGGGGTGAAAG+AGG 0.546166 5_2:+5900771 None:intergenic
GTAGGTGTGAGTGCCGGAGG+AGG 0.550735 5_2:-5901561 None:intergenic
AGGTGTATTAGCAGGAGGAG+TGG 0.554875 5_2:-5901241 None:intergenic
GGTGGTGGAGTAGACTGAAC+AGG 0.557587 5_2:-5901456 None:intergenic
TGAACAGGTGGAGGAGTGAG+TGG 0.558370 5_2:-5901441 None:intergenic
GAGGAGAAGACTGAACGGGA+GGG 0.560092 5_2:-5901371 None:intergenic
TGCTGGAGATGAGTTTGGGG+AGG 0.562310 5_2:-5901214 None:intergenic
TTATCACAGTGAGATTAAGC+TGG 0.562741 5_2:+5900839 Msa0752300:five_prime_UTR
GTTGCTGGAGGAGATGAGAG+AGG 0.564896 5_2:-5901585 None:intergenic
TGAGACATTCATTTCAGGGG+AGG 0.568142 5_2:+5904146 Msa0752300:three_prime_UTR
AGAGGAGTAGGTGTGAGTGC+CGG 0.568247 5_2:-5901567 None:intergenic
ACAATGACCTCTTTCACCCC+TGG 0.570301 5_2:-5900778 None:intergenic
GCTGGAGGTGGAGTTGCGGG+AGG 0.571892 5_2:-5901534 None:intergenic
AGGGGCTTTACTCTTAAGCT+TGG 0.573619 5_2:-5901628 None:intergenic
CCGGGAGCGGGAGCATCTGA+TGG 0.577356 5_2:-5901672 None:intergenic
GTTGGAGGTGTATTAGCAGG+AGG 0.581176 5_2:-5901246 None:intergenic
TAAATCAAGACAATTAAGAT+GGG 0.584084 5_2:+5901114 Msa0752300:exon
ACAGGTGGAGGGGAGGCTTG+AGG 0.584481 5_2:-5901273 None:intergenic
GGAGATTGCTGAACTGGTGG+TGG 0.584891 5_2:-5901408 None:intergenic
ATGACCTCTTTCACCCCTGG+TGG 0.588469 5_2:-5900775 None:intergenic
ATTCAAAAGAAAGCAACGAA+TGG 0.591030 5_2:-5904228 None:intergenic
AGATTGAACAGGTGGAGGGG+AGG 0.591929 5_2:-5901280 None:intergenic
GAACAGGTGGAGGAGTGAGT+GGG 0.591944 5_2:-5901440 None:intergenic
TACCAGAGGGAGAGATAGAG+GGG 0.596413 5_2:-5901710 None:intergenic
GGTGGAGCGGATACAGGTGG+AGG 0.597066 5_2:-5901390 None:intergenic
GAGAAGTGAACTTACATCAT+CGG 0.598885 5_2:-5901733 None:intergenic
GGAGTAGACTGAACAGGTGG+AGG 0.602159 5_2:-5901450 None:intergenic
TAAGAGTAAAGCCCCTACAT+TGG 0.608658 5_2:+5901635 Msa0752300:CDS
GGTGGTGGAGCGGATACAGG+TGG 0.611309 5_2:-5901393 None:intergenic
TCTTGAGACATTCATTTCAG+GGG 0.612581 5_2:+5904143 Msa0752300:three_prime_UTR
GGAGCTGGAGTGGTTGCTGG+AGG 0.617650 5_2:-5901597 None:intergenic
GCCGGAGGAGGAGTTGCTGG+AGG 0.626597 5_2:-5901549 None:intergenic
AGGTGGAGGAGAAGACTGAA+CGG 0.627967 5_2:-5901376 None:intergenic
GTATTAGCAGGAGGAGTGGG+TGG 0.629272 5_2:-5901237 None:intergenic
ATTTACGTAGTTCTGTAACG+TGG 0.629666 5_2:+5904311 Msa0752300:three_prime_UTR
GACCTGCCAGTTGCATGCGC+AGG 0.636482 5_2:+5901041 Msa0752300:five_prime_UTR
TGAGGCAGTGGGATCCACCA+GGG 0.639800 5_2:+5900761 None:intergenic
TGGAGGTGGAGAAGACTGCA+CGG 0.644717 5_2:-5901313 None:intergenic
GGAGGTGGAGAAGACTGCAC+GGG 0.646719 5_2:-5901312 None:intergenic
AGAGTGGGGCAGAGAAGTTG+TGG 0.650807 5_2:+5903952 Msa0752300:intron
GAGTACAGGTGCCAATGTAG+GGG 0.651058 5_2:-5901646 None:intergenic
GGAGGAGATTGCTGAACTGG+TGG 0.653228 5_2:-5901411 None:intergenic
ATGTATATATCATGATCATG+AGG 0.655894 5_2:-5900886 None:intergenic
GAGGCAGTGGGATCCACCAG+GGG 0.660048 5_2:+5900762 None:intergenic
AACAGGTGGAGGAGTGAGTG+GGG 0.663660 5_2:-5901439 None:intergenic
TTGCTGAACTGGTGGTGGAG+CGG 0.669656 5_2:-5901403 None:intergenic
ACTTACATCATCGGTACCAG+AGG 0.669772 5_2:-5901724 None:intergenic
CTTACATCATCGGTACCAGA+GGG 0.676343 5_2:-5901723 None:intergenic
GGTGGAGTAGACTGAACAGG+TGG 0.681346 5_2:-5901453 None:intergenic
TTACGTAGTTCTGTAACGTG+GGG 0.688815 5_2:+5904313 Msa0752300:three_prime_UTR
ACCAGAGGGAGAGATAGAGG+GGG 0.699318 5_2:-5901709 None:intergenic
GGTGTCGATCTAGAACAGCA+AGG 0.718801 5_2:-5904018 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATATTAAAAAATTA+TGG + chr5_2:5902089-5902108 Msa0752300:intron 0.0%
!! TTAATAAAAATAAAAAAATA+CGG - chr5_2:5902373-5902392 None:intergenic 0.0%
!! TAAAAAATATTAAAAAATTA+TGG - chr5_2:5902089-5902108 None:intergenic 0.0%
!! TAAAAAATATTAATATGACA+TGG - chr5_2:5901854-5901873 None:intergenic 10.0%
!!! ATGTCATATTAATATTTTTT+AGG + chr5_2:5901853-5901872 Msa0752300:intron 10.0%
!!! TGTCATATTAATATTTTTTA+GGG + chr5_2:5901854-5901873 Msa0752300:intron 10.0%
!! TAAAAAAATCTGAAAAAATA+CGG + chr5_2:5902318-5902337 Msa0752300:intron 10.0%
!! AACAAAAAATTAAAAAATTC+TGG - chr5_2:5902465-5902484 None:intergenic 10.0%
!! TAAAAAATGTTAAAAAATTC+TGG - chr5_2:5902514-5902533 None:intergenic 10.0%
!! AAAAAAAATCTGAAAAAATA+CGG - chr5_2:5902830-5902849 None:intergenic 10.0%
!! TACATACATAATTACATATA+CGG + chr5_2:5900904-5900923 Msa0752300:five_prime_UTR 15.0%
!! TGGAAAATATTTAAAAATTC+TGG + chr5_2:5902280-5902299 Msa0752300:intron 15.0%
!!! TGAAAAATTCTGAAAAAATA+CGG + chr5_2:5902773-5902792 Msa0752300:intron 15.0%
!! TGGAAAATATTTAAAAAATC+TGG - chr5_2:5902865-5902884 None:intergenic 15.0%
!! AAAAAAATGTTAAACAATTC+TGG - chr5_2:5903047-5903066 None:intergenic 15.0%
!!! TAAAATTTTCCTTTGAATTT+TGG - chr5_2:5903323-5903342 None:intergenic 15.0%
!!! AAAATTCAAAGGAAAATTTT+AGG + chr5_2:5903322-5903341 Msa0752300:intron 15.0%
!!! AAATTCAAAGGAAAATTTTA+GGG + chr5_2:5903323-5903342 Msa0752300:intron 15.0%
!! ACATTTCTCTATAAAAAATA+GGG - chr5_2:5903399-5903418 None:intergenic 15.0%
!! AACATTTCTCTATAAAAAAT+AGG - chr5_2:5903400-5903419 None:intergenic 15.0%
!!! TAAACATAGAAATTTTTTCT+TGG + chr5_2:5903452-5903471 Msa0752300:intron 15.0%
!! GTTAGATCTAATATAAAAAA+GGG - chr5_2:5903594-5903613 None:intergenic 15.0%
!! AGTTAGATCTAATATAAAAA+AGG - chr5_2:5903595-5903614 None:intergenic 15.0%
!! GAGAAAATAATAATATATAG+AGG - chr5_2:5904080-5904099 None:intergenic 15.0%
!! ATAAATCAAGACAATTAAGA+TGG + chr5_2:5901113-5901132 Msa0752300:exon 20.0%
!! TAAATCAAGACAATTAAGAT+GGG + chr5_2:5901114-5901133 Msa0752300:exon 20.0%
!!! ACTAACTAGGTTTTTAATAT+TGG + chr5_2:5901785-5901804 Msa0752300:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG + chr5_2:5901870-5901889 Msa0752300:intron 20.0%
!! GAAAATTCGCTATATTTATA+GGG - chr5_2:5901897-5901916 None:intergenic 20.0%
!! CTGGAAAAATGAAAAAAATA+TGG - chr5_2:5902885-5902904 None:intergenic 20.0%
!! AAATATTTAATTATCCTACG+TGG + chr5_2:5903180-5903199 Msa0752300:intron 20.0%
!!! AATTCAAAGGAAAATTTTAG+GGG + chr5_2:5903324-5903343 Msa0752300:intron 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG - chr5_2:5903383-5903402 None:intergenic 20.0%
!!! TGGTATTTTCAATACTAATA+AGG + chr5_2:5903669-5903688 Msa0752300:intron 20.0%
!!! CTTAAACATGTTTTTTCATT+AGG - chr5_2:5903795-5903814 None:intergenic 20.0%
!! AATAGATTAAGTAGAAGAAA+AGG - chr5_2:5903835-5903854 None:intergenic 20.0%
!!! TTAGACTAATTAAGTTTTGT+GGG + chr5_2:5903911-5903930 Msa0752300:intron 20.0%
!!! ACAACTTAGTTTTAATCTAA+TGG - chr5_2:5904356-5904375 None:intergenic 20.0%
! ATGTATATATCATGATCATG+AGG - chr5_2:5900889-5900908 None:intergenic 25.0%
! ATCACTACTAATTACTAACT+AGG + chr5_2:5901772-5901791 Msa0752300:intron 25.0%
! CAAATCAAATTGTAAGGTAA+CGG + chr5_2:5901825-5901844 Msa0752300:intron 25.0%
! AAATCAAATTGTAAGGTAAC+GGG + chr5_2:5901826-5901845 Msa0752300:intron 25.0%
! CGAAAATTCGCTATATTTAT+AGG - chr5_2:5901898-5901917 None:intergenic 25.0%
!! AATATAGCGAATTTTCGTTT+TGG + chr5_2:5901901-5901920 Msa0752300:intron 25.0%
!! ATTGTGGATGGAAAATTTTA+GGG - chr5_2:5903294-5903313 None:intergenic 25.0%
!! AATTGTGGATGGAAAATTTT+AGG - chr5_2:5903293-5903312 None:intergenic 25.0%
!! AAATTTTCCATCCACAATTT+TGG + chr5_2:5901932-5901951 Msa0752300:intron 25.0%
! AAATTGTTAATTATCCTACG+TGG - chr5_2:5902044-5902063 None:intergenic 25.0%
! AAATGAAAAATGTTGCACTA+TGG - chr5_2:5902562-5902581 None:intergenic 25.0%
!! AAATTTTCCATCCACAATTT+TGG - chr5_2:5901932-5901951 None:intergenic 25.0%
!! AATTGTGGATGGAAAATTTT+AGG + chr5_2:5903293-5903312 Msa0752300:intron 25.0%
!! ATTGTGGATGGAAAATTTTA+GGG + chr5_2:5903294-5903313 Msa0752300:intron 25.0%
!! ATTCAAAGGAAAATTTTAGG+GGG + chr5_2:5903325-5903344 Msa0752300:intron 25.0%
! GAAAATTCGCCATATTTATA+GGG + chr5_2:5903356-5903375 Msa0752300:intron 25.0%
! TTGATATGAGTCAAACTAAA+GGG - chr5_2:5903718-5903737 None:intergenic 25.0%
! TTTGATATGAGTCAAACTAA+AGG - chr5_2:5903719-5903738 None:intergenic 25.0%
!!! ACTCATATCAAAGCTTTATT+TGG + chr5_2:5903727-5903746 Msa0752300:intron 25.0%
! TTTGGAGATCAAATATATCT+CGG + chr5_2:5903745-5903764 Msa0752300:intron 25.0%
!!! ACATGTTTTTTCATTAGGAA+AGG - chr5_2:5903790-5903809 None:intergenic 25.0%
!! GTTAGACTAATTAAGTTTTG+TGG + chr5_2:5903910-5903929 Msa0752300:intron 25.0%
!! ATTATTTTCTCGATGTGATA+TGG + chr5_2:5904089-5904108 Msa0752300:three_prime_UTR 25.0%
!! TTATTTTCTCGATGTGATAT+GGG + chr5_2:5904090-5904109 Msa0752300:three_prime_UTR 25.0%
TTGAAGACTTAAGAGTTTGT+TGG - chr5_2:5900963-5900982 None:intergenic 30.0%
!! CCTTACAATTTGATTTGGTA+AGG - chr5_2:5901822-5901841 None:intergenic 30.0%
CCTTACCAAATCAAATTGTA+AGG + chr5_2:5901819-5901838 Msa0752300:intron 30.0%
CGTTACCTTACAATTTGATT+TGG - chr5_2:5901827-5901846 None:intergenic 30.0%
! TTGTGGATGGAAAATTTTAG+GGG - chr5_2:5903295-5903314 None:intergenic 30.0%
! AAGTTTGCTTATTGCATAGA+TGG + chr5_2:5902584-5902603 Msa0752300:intron 30.0%
CCATAATCAATGAAACCAAA+CGG - chr5_2:5902638-5902657 None:intergenic 30.0%
! CGTTTGGTTTCATTGATTAT+GGG + chr5_2:5902636-5902655 Msa0752300:intron 30.0%
! TTGTGGATGGAAAATTTTAG+GGG + chr5_2:5903295-5903314 Msa0752300:intron 30.0%
! AATATGGCGAATTTTCGTTT+TGG - chr5_2:5903352-5903371 None:intergenic 30.0%
CGAAAATTCGCCATATTTAT+AGG + chr5_2:5903355-5903374 Msa0752300:intron 30.0%
!!! GTTTTTGGTCCCTATAAATA+TGG - chr5_2:5901885-5901904 None:intergenic 30.0%
TGATATGAGTCAAACTAAAG+GGG - chr5_2:5903717-5903736 None:intergenic 30.0%
AGATCAAATATATCTCGGTT+CGG + chr5_2:5903750-5903769 Msa0752300:intron 30.0%
TATTATATTGCATTGCAGAG+TGG + chr5_2:5903936-5903955 Msa0752300:intron 30.0%
ATTATATTGCATTGCAGAGT+GGG + chr5_2:5903937-5903956 Msa0752300:intron 30.0%
!! AAGATGGTTGGATTAGTATT+TGG + chr5_2:5903981-5904000 Msa0752300:CDS 30.0%
ATTCTTGAGACATTCATTTC+AGG + chr5_2:5904141-5904160 Msa0752300:three_prime_UTR 30.0%
TTCTTGAGACATTCATTTCA+GGG + chr5_2:5904142-5904161 Msa0752300:three_prime_UTR 30.0%
ATTCAAAAGAAAGCAACGAA+TGG - chr5_2:5904231-5904250 None:intergenic 30.0%
CGTTTGTGACATTCCATTAT+CGG + chr5_2:5900816-5900835 Msa0752300:five_prime_UTR 35.0%
TTATCACAGTGAGATTAAGC+TGG + chr5_2:5900839-5900858 Msa0752300:five_prime_UTR 35.0%
GAGATTAAGCTGGAAATGTT+TGG + chr5_2:5900849-5900868 Msa0752300:five_prime_UTR 35.0%
AGGTTAAATAGGCAGGATAT+AGG - chr5_2:5900932-5900951 None:intergenic 35.0%
!! ACTTAAGAGTTTGTTGGCAT+GGG - chr5_2:5900957-5900976 None:intergenic 35.0%
!!! CACACATCATATAGTTTTGG+TGG + chr5_2:5901137-5901156 Msa0752300:CDS 35.0%
!!! CATCATATAGTTTTGGTGGT+TGG + chr5_2:5901141-5901160 Msa0752300:CDS 35.0%
GAGAAGTGAACTTACATCAT+CGG - chr5_2:5901736-5901755 None:intergenic 35.0%
! TGTGGATGGAAAATTTTAGG+GGG - chr5_2:5903296-5903315 None:intergenic 35.0%
!! ATTGCTTTTCTCATTCCGTT+TGG + chr5_2:5902620-5902639 Msa0752300:intron 35.0%
! CCGTTTGGTTTCATTGATTA+TGG + chr5_2:5902635-5902654 Msa0752300:intron 35.0%
! GGTTTCATTGATTATGGGTA+TGG + chr5_2:5902641-5902660 Msa0752300:intron 35.0%
CTGCTGTCAAATTTGGATAA+CGG - chr5_2:5903266-5903285 None:intergenic 35.0%
GTTATCCAAATTTGACAGCA+GGG + chr5_2:5903265-5903284 Msa0752300:intron 35.0%
! TGTGGATGGAAAATTTTAGG+GGG + chr5_2:5903296-5903315 Msa0752300:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + chr5_2:5903413-5903432 Msa0752300:intron 35.0%
!! TTTCTTAACTTGTGCCCTAA+GGG + chr5_2:5903553-5903572 Msa0752300:intron 35.0%
!! CATATTAACTTGTGCCCTTA+GGG - chr5_2:5903570-5903589 None:intergenic 35.0%
!! TCATATTAACTTGTGCCCTT+AGG - chr5_2:5903571-5903590 None:intergenic 35.0%
AAAGGGGTTGTGTATGATAT+GGG - chr5_2:5903701-5903720 None:intergenic 35.0%
TAAAGGGGTTGTGTATGATA+TGG - chr5_2:5903702-5903721 None:intergenic 35.0%
TTATATTGCATTGCAGAGTG+GGG + chr5_2:5903938-5903957 Msa0752300:intron 35.0%
TCTTGAGACATTCATTTCAG+GGG + chr5_2:5904143-5904162 Msa0752300:three_prime_UTR 35.0%
!! GGGAGGTTTTGTATTAATTG+AGG + chr5_2:5904163-5904182 Msa0752300:three_prime_UTR 35.0%
AAAAGAAAGCAACGAATGGA+TGG - chr5_2:5904227-5904246 None:intergenic 35.0%
! ATTTACGTAGTTCTGTAACG+TGG + chr5_2:5904311-5904330 Msa0752300:three_prime_UTR 35.0%
! TTTACGTAGTTCTGTAACGT+GGG + chr5_2:5904312-5904331 Msa0752300:three_prime_UTR 35.0%
CTCACTGTGATAACCGATAA+TGG - chr5_2:5900832-5900851 None:intergenic 40.0%
!! GACTTAAGAGTTTGTTGGCA+TGG - chr5_2:5900958-5900977 None:intergenic 40.0%
! GGGCACACATCATATAGTTT+TGG + chr5_2:5901134-5901153 Msa0752300:CDS 40.0%
TAAGAGTAAAGCCCCTACAT+TGG + chr5_2:5901635-5901654 Msa0752300:CDS 40.0%
CGTTATCCAAATTTGACAGC+AGG + chr5_2:5903264-5903283 Msa0752300:intron 40.0%
TTAGGGGGACCAAAATTCAA+AGG + chr5_2:5903311-5903330 Msa0752300:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + chr5_2:5903412-5903431 Msa0752300:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG + chr5_2:5903414-5903433 Msa0752300:intron 40.0%
TTTCTAAACTTGTGCCCCAA+GGG - chr5_2:5903431-5903450 None:intergenic 40.0%
!! GTTTCTTAACTTGTGCCCTA+AGG + chr5_2:5903552-5903571 Msa0752300:intron 40.0%
ATGCGTGCATCTCTCTATAA+AGG + chr5_2:5903643-5903662 Msa0752300:intron 40.0%
GCATCTCTCTATAAAGGTCT+TGG + chr5_2:5903649-5903668 Msa0752300:intron 40.0%
AAGGGGTTGTGTATGATATG+GGG - chr5_2:5903700-5903719 None:intergenic 40.0%
GAAGTTGTGGTCACATAAGA+TGG + chr5_2:5903965-5903984 Msa0752300:CDS 40.0%
TTGTGGTCACATAAGATGGT+TGG + chr5_2:5903969-5903988 Msa0752300:CDS 40.0%
!!! GAGTTTTGAAGAGAAGACAG+AGG - chr5_2:5904042-5904061 None:intergenic 40.0%
! TTACGTAGTTCTGTAACGTG+GGG + chr5_2:5904313-5904332 Msa0752300:three_prime_UTR 40.0%
ATGGGAGAGGTTAAATAGGC+AGG - chr5_2:5900939-5900958 None:intergenic 45.0%
TGGCATGGGAGAGGTTAAAT+AGG - chr5_2:5900943-5900962 None:intergenic 45.0%
ATATAACCTGCGCATGCAAC+TGG - chr5_2:5901050-5901069 None:intergenic 45.0%
AGAAGATTGAACAGGTGGAG+GGG - chr5_2:5901286-5901305 None:intergenic 45.0%
GAGAAGATTGAACAGGTGGA+GGG - chr5_2:5901287-5901306 None:intergenic 45.0%
GCTTTACTCTTAAGCTTGGC+AGG - chr5_2:5901627-5901646 None:intergenic 45.0%
AGGGGCTTTACTCTTAAGCT+TGG - chr5_2:5901631-5901650 None:intergenic 45.0%
AGAGTACAGGTGCCAATGTA+GGG - chr5_2:5901650-5901669 None:intergenic 45.0%
CTTACATCATCGGTACCAGA+GGG - chr5_2:5901726-5901745 None:intergenic 45.0%
ACTTACATCATCGGTACCAG+AGG - chr5_2:5901727-5901746 None:intergenic 45.0%
!! TGATTTGGTAAGGACGTGCT+AGG - chr5_2:5901812-5901831 None:intergenic 45.0%
! TTTTGGTCCCTGCTGTCAAA+TGG + chr5_2:5901949-5901968 Msa0752300:intron 45.0%
TTTGGTCCCTGCTGTCAAAT+GGG + chr5_2:5901950-5901969 Msa0752300:intron 45.0%
GTTATCCCCATTTGACAGCA+GGG - chr5_2:5901959-5901978 None:intergenic 45.0%
CTGCTGTCAAATGGGGATAA+CGG + chr5_2:5901958-5901977 Msa0752300:intron 45.0%
TTGGTCCCTGCTGTCAAATT+TGG - chr5_2:5903273-5903292 None:intergenic 45.0%
GTTTCTAAACTTGTGCCCCA+AGG - chr5_2:5903432-5903451 None:intergenic 45.0%
TGAGACATTCATTTCAGGGG+AGG + chr5_2:5904146-5904165 Msa0752300:three_prime_UTR 45.0%
!! TAAAAAAAATTTAAAAATTC+TGG + chr5_2:5902128-5902147 Msa0752300:intron 5.0%
!! TAATAAAAATTAAAAAATTC+TGG + chr5_2:5902164-5902183 Msa0752300:intron 5.0%
!! AAAAAATATTAAAAAAATTC+TGG + chr5_2:5902212-5902231 Msa0752300:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr5_2:5902260-5902279 Msa0752300:intron 5.0%
!!! ATGAAATTTTTTTAAAAATA+TGG - chr5_2:5902421-5902440 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - chr5_2:5902260-5902279 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - chr5_2:5902260-5902279 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - chr5_2:5902260-5902279 None:intergenic 5.0%
!! TAAAAAAAATTTAAAAATTC+TGG - chr5_2:5902128-5902147 None:intergenic 5.0%
ACAATGACCTCTTTCACCCC+TGG - chr5_2:5900781-5900800 None:intergenic 50.0%
!! AGAGTTTGTTGGCATGGGAG+AGG - chr5_2:5900952-5900971 None:intergenic 50.0%
! TGGTGCTGGAGATGAGTTTG+GGG - chr5_2:5901220-5901239 None:intergenic 50.0%
! GTGGTGCTGGAGATGAGTTT+GGG - chr5_2:5901221-5901240 None:intergenic 50.0%
GGTGTATTAGCAGGAGGAGT+GGG - chr5_2:5901243-5901262 None:intergenic 50.0%
AGGTGTATTAGCAGGAGGAG+TGG - chr5_2:5901244-5901263 None:intergenic 50.0%
! GTTGGAGGTGTATTAGCAGG+AGG - chr5_2:5901249-5901268 None:intergenic 50.0%
! GTGGTTGGAGGTGTATTAGC+AGG - chr5_2:5901252-5901271 None:intergenic 50.0%
GGAGAAGATTGAACAGGTGG+AGG - chr5_2:5901288-5901307 None:intergenic 50.0%
GGAGGAGAAGATTGAACAGG+TGG - chr5_2:5901291-5901310 None:intergenic 50.0%
GGTGGAGGAGAAGATTGAAC+AGG - chr5_2:5901294-5901313 None:intergenic 50.0%
AGGTGGAGGAGAAGACTGAA+CGG - chr5_2:5901379-5901398 None:intergenic 50.0%
ACTCTTAAGCTTGGCAGGAG+CGG - chr5_2:5901622-5901641 None:intergenic 50.0%
GAGTACAGGTGCCAATGTAG+GGG - chr5_2:5901649-5901668 None:intergenic 50.0%
! GAGAGTACAGGTGCCAATGT+AGG - chr5_2:5901651-5901670 None:intergenic 50.0%
TACCAGAGGGAGAGATAGAG+GGG - chr5_2:5901713-5901732 None:intergenic 50.0%
GTACCAGAGGGAGAGATAGA+GGG - chr5_2:5901714-5901733 None:intergenic 50.0%
GCAGGGACCAAAATTGTGGA+TGG - chr5_2:5903282-5903301 None:intergenic 50.0%
GACAGCAGGGACCAAAATTG+TGG - chr5_2:5903278-5903297 None:intergenic 50.0%
TTGGTCCCTGCTGTCAAATG+GGG + chr5_2:5901951-5901970 Msa0752300:intron 50.0%
CGTTATCCCCATTTGACAGC+AGG - chr5_2:5901960-5901979 None:intergenic 50.0%
ATGACTGTACAGTGCCACGT+AGG + chr5_2:5902027-5902046 Msa0752300:intron 50.0%
ATGACTGTACAGTGCCACGT+AGG - chr5_2:5902027-5902046 None:intergenic 50.0%
GACAGCAGGGACCAAAATTG+TGG + chr5_2:5903278-5903297 Msa0752300:intron 50.0%
GCAGGGACCAAAATTGTGGA+TGG + chr5_2:5903282-5903301 Msa0752300:intron 50.0%
CCATGCGCGCACACAAAATT+TGG - chr5_2:5903865-5903884 None:intergenic 50.0%
! CCAAATTTTGTGTGCGCGCA+TGG + chr5_2:5903862-5903881 Msa0752300:intron 50.0%
! CGATCTAGAACAGCAAGGAC+AGG - chr5_2:5904016-5904035 None:intergenic 50.0%
!! GGTGTCGATCTAGAACAGCA+AGG - chr5_2:5904021-5904040 None:intergenic 50.0%
! TGCGCTGTGTTTTCCAGCGT+AGG + chr5_2:5901171-5901190 Msa0752300:CDS 55.0%
! GGAGGTGGATGGAGCTTGTT+GGG - chr5_2:5901199-5901218 None:intergenic 55.0%
GATGAGTTTGGGGAGGTGGA+TGG - chr5_2:5901210-5901229 None:intergenic 55.0%
TGGAGATGAGTTTGGGGAGG+TGG - chr5_2:5901214-5901233 None:intergenic 55.0%
TGCTGGAGATGAGTTTGGGG+AGG - chr5_2:5901217-5901236 None:intergenic 55.0%
! GGTGGTGCTGGAGATGAGTT+TGG - chr5_2:5901222-5901241 None:intergenic 55.0%
GTATTAGCAGGAGGAGTGGG+TGG - chr5_2:5901240-5901259 None:intergenic 55.0%
AGATTGAACAGGTGGAGGGG+AGG - chr5_2:5901283-5901302 None:intergenic 55.0%
TGGAGGTGGAGAAGACTGCA+CGG - chr5_2:5901316-5901335 None:intergenic 55.0%
AGGAGAAGACTGAACGGGAG+GGG - chr5_2:5901373-5901392 None:intergenic 55.0%
GAGGAGAAGACTGAACGGGA+GGG - chr5_2:5901374-5901393 None:intergenic 55.0%
GGTGGAGGAGAAGACTGAAC+GGG - chr5_2:5901378-5901397 None:intergenic 55.0%
!! TTGCTGAACTGGTGGTGGAG+CGG - chr5_2:5901406-5901425 None:intergenic 55.0%
GGAGATTGCTGAACTGGTGG+TGG - chr5_2:5901411-5901430 None:intergenic 55.0%
GGAGGAGATTGCTGAACTGG+TGG - chr5_2:5901414-5901433 None:intergenic 55.0%
GGAGGAGGAGATTGCTGAAC+TGG - chr5_2:5901417-5901436 None:intergenic 55.0%
AACAGGTGGAGGAGTGAGTG+GGG - chr5_2:5901442-5901461 None:intergenic 55.0%
GAACAGGTGGAGGAGTGAGT+GGG - chr5_2:5901443-5901462 None:intergenic 55.0%
TGAACAGGTGGAGGAGTGAG+TGG - chr5_2:5901444-5901463 None:intergenic 55.0%
GGAGTAGACTGAACAGGTGG+AGG - chr5_2:5901453-5901472 None:intergenic 55.0%
GGTGGAGTAGACTGAACAGG+TGG - chr5_2:5901456-5901475 None:intergenic 55.0%
!! GGTGGTGGAGTAGACTGAAC+AGG - chr5_2:5901459-5901478 None:intergenic 55.0%
! AGAATGGTGGAGGTGAGGCA+GGG - chr5_2:5901494-5901513 None:intergenic 55.0%
! AGGAGAGAATGGTGGAGGTG+AGG - chr5_2:5901499-5901518 None:intergenic 55.0%
AGTTGCTGGAGGTGGAGTTG+CGG - chr5_2:5901541-5901560 None:intergenic 55.0%
AGAGGAGTAGGTGTGAGTGC+CGG - chr5_2:5901570-5901589 None:intergenic 55.0%
GGAGGAGATGAGAGAGGAGT+AGG - chr5_2:5901582-5901601 None:intergenic 55.0%
GTTGCTGGAGGAGATGAGAG+AGG - chr5_2:5901588-5901607 None:intergenic 55.0%
CTCTTAAGCTTGGCAGGAGC+GGG - chr5_2:5901621-5901640 None:intergenic 55.0%
! GCATCTGATGGCGAGAGTAC+AGG - chr5_2:5901663-5901682 None:intergenic 55.0%
ACCAGAGGGAGAGATAGAGG+GGG - chr5_2:5901712-5901731 None:intergenic 55.0%
GGTACCAGAGGGAGAGATAG+AGG - chr5_2:5901715-5901734 None:intergenic 55.0%
!! TTTGGATAACGGCGCTGACG+TGG - chr5_2:5903255-5903274 None:intergenic 55.0%
AGAGTGGGGCAGAGAAGTTG+TGG + chr5_2:5903952-5903971 Msa0752300:intron 55.0%
ACGTGGGGAGACTCTACAAC+AGG + chr5_2:5904328-5904347 Msa0752300:three_prime_UTR 55.0%
AACCTGCGCATGCAACTGGC+AGG - chr5_2:5901046-5901065 None:intergenic 60.0%
!! AGCTTGTTGGGCTCCTACGC+TGG - chr5_2:5901187-5901206 None:intergenic 60.0%
GGGAGGTGGATGGAGCTTGT+TGG - chr5_2:5901200-5901219 None:intergenic 60.0%
GAGGCTTGAGGAGTGGTTGG+AGG - chr5_2:5901264-5901283 None:intergenic 60.0%
GGAGGTGGAGAAGACTGCAC+GGG - chr5_2:5901315-5901334 None:intergenic 60.0%
!! AGTGGACTGAGCTGGTGGAG+GGG - chr5_2:5901349-5901368 None:intergenic 60.0%
!! GAGTGGACTGAGCTGGTGGA+GGG - chr5_2:5901350-5901369 None:intergenic 60.0%
GGAGAAGACTGAACGGGAGG+GGG - chr5_2:5901372-5901391 None:intergenic 60.0%
GGAGGAGAAGACTGAACGGG+AGG - chr5_2:5901375-5901394 None:intergenic 60.0%
!! ACTGGTGGTGGAGCGGATAC+AGG - chr5_2:5901399-5901418 None:intergenic 60.0%
! AATGGTGGAGGTGAGGCAGG+GGG - chr5_2:5901492-5901511 None:intergenic 60.0%
! GAATGGTGGAGGTGAGGCAG+GGG - chr5_2:5901493-5901512 None:intergenic 60.0%
! GAGAATGGTGGAGGTGAGGC+AGG - chr5_2:5901495-5901514 None:intergenic 60.0%
GTAGCAGGGGGAGGAGAGAA+TGG - chr5_2:5901510-5901529 None:intergenic 60.0%
TTGCGGGAGGTGGAGTAGCA+GGG - chr5_2:5901524-5901543 None:intergenic 60.0%
GTTGCTGGAGGTGGAGTTGC+GGG - chr5_2:5901540-5901559 None:intergenic 60.0%
ACCTCCAGCAACTCCTCCTC+CGG + chr5_2:5901548-5901567 Msa0752300:CDS 60.0%
AGAGAAGAGAGTCCGGGAGC+GGG - chr5_2:5901687-5901706 None:intergenic 60.0%
GAGAGAAGAGAGTCCGGGAG+CGG - chr5_2:5901688-5901707 None:intergenic 60.0%
GGGGAGAGAGAAGAGAGTCC+GGG - chr5_2:5901693-5901712 None:intergenic 60.0%
GGGGGAGAGAGAAGAGAGTC+CGG - chr5_2:5901694-5901713 None:intergenic 60.0%
TCCCCCTCTATCTCTCCCTC+TGG + chr5_2:5901708-5901727 Msa0752300:CDS 60.0%
GACCTGCCAGTTGCATGCGC+AGG + chr5_2:5901041-5901060 Msa0752300:five_prime_UTR 65.0%
GGGGAGGCTTGAGGAGTGGT+TGG - chr5_2:5901267-5901286 None:intergenic 65.0%
TGGAGGGGAGGCTTGAGGAG+TGG - chr5_2:5901271-5901290 None:intergenic 65.0%
ACAGGTGGAGGGGAGGCTTG+AGG - chr5_2:5901276-5901295 None:intergenic 65.0%
GGAGAAGACTGCACGGGTGG+AGG - chr5_2:5901309-5901328 None:intergenic 65.0%
GGTGGAGAAGACTGCACGGG+TGG - chr5_2:5901312-5901331 None:intergenic 65.0%
GGGGAGGACTGAACTGGAGG+TGG - chr5_2:5901330-5901349 None:intergenic 65.0%
GGAGGGGAGGACTGAACTGG+AGG - chr5_2:5901333-5901352 None:intergenic 65.0%
GGTGGAGGGGAGGACTGAAC+TGG - chr5_2:5901336-5901355 None:intergenic 65.0%
!! GGAGTGGACTGAGCTGGTGG+AGG - chr5_2:5901351-5901370 None:intergenic 65.0%
AGACTGAACGGGAGGGGGAG+TGG - chr5_2:5901367-5901386 None:intergenic 65.0%
GGTGGAGCGGATACAGGTGG+AGG - chr5_2:5901393-5901412 None:intergenic 65.0%
!! GGTGGTGGAGCGGATACAGG+TGG - chr5_2:5901396-5901415 None:intergenic 65.0%
GGAGTGAGTGGGGTTGGAGG+AGG - chr5_2:5901432-5901451 None:intergenic 65.0%
GGAGGAGTGAGTGGGGTTGG+AGG - chr5_2:5901435-5901454 None:intergenic 65.0%
GGTGGAGGAGTGAGTGGGGT+TGG - chr5_2:5901438-5901457 None:intergenic 65.0%
GGGGGAGGAGAGAATGGTGG+AGG - chr5_2:5901504-5901523 None:intergenic 65.0%
GCAGGGGGAGGAGAGAATGG+TGG - chr5_2:5901507-5901526 None:intergenic 65.0%
TGCGGGAGGTGGAGTAGCAG+GGG - chr5_2:5901523-5901542 None:intergenic 65.0%
GTTGCGGGAGGTGGAGTAGC+AGG - chr5_2:5901525-5901544 None:intergenic 65.0%
GGAGGAGGAGTTGCTGGAGG+TGG - chr5_2:5901549-5901568 None:intergenic 65.0%
! AGTGCCGGAGGAGGAGTTGC+TGG - chr5_2:5901555-5901574 None:intergenic 65.0%
!! GTAGGTGTGAGTGCCGGAGG+AGG - chr5_2:5901564-5901583 None:intergenic 65.0%
!! GGAGTAGGTGTGAGTGCCGG+AGG - chr5_2:5901567-5901586 None:intergenic 65.0%
GGAGCTGGAGTGGTTGCTGG+AGG - chr5_2:5901600-5901619 None:intergenic 65.0%
CCATCAGATGCTCCCGCTCC+CGG + chr5_2:5901672-5901691 Msa0752300:CDS 65.0%
!! TGGGGATAACGGCGCTGACG+TGG + chr5_2:5901969-5901988 Msa0752300:intron 65.0%
CGCTGACGTGGCAGATGACG+TGG + chr5_2:5901981-5902000 Msa0752300:intron 65.0%
CGCTGACGTGGCAGATGACG+TGG - chr5_2:5901981-5902000 None:intergenic 65.0%
GCAGGAGGAGTGGGTGGTGC+TGG - chr5_2:5901234-5901253 None:intergenic 70.0%
GGACTGAGCTGGTGGAGGGG+AGG - chr5_2:5901346-5901365 None:intergenic 70.0%
!! GGGGGAGTGGACTGAGCTGG+TGG - chr5_2:5901354-5901373 None:intergenic 70.0%
!! GGAGGGGGAGTGGACTGAGC+TGG - chr5_2:5901357-5901376 None:intergenic 70.0%
! GGGGGTGGTGATGCAGGTGG+TGG - chr5_2:5901474-5901493 None:intergenic 70.0%
! GCAGGGGGTGGTGATGCAGG+TGG - chr5_2:5901477-5901496 None:intergenic 70.0%
! GAGGCAGGGGGTGGTGATGC+AGG - chr5_2:5901480-5901499 None:intergenic 70.0%
GGAGGTGGAGTAGCAGGGGG+AGG - chr5_2:5901519-5901538 None:intergenic 70.0%
GCGGGAGGTGGAGTAGCAGG+GGG - chr5_2:5901522-5901541 None:intergenic 70.0%
GGAGGTGGAGTTGCGGGAGG+TGG - chr5_2:5901534-5901553 None:intergenic 70.0%
GCTGGAGGTGGAGTTGCGGG+AGG - chr5_2:5901537-5901556 None:intergenic 70.0%
GCCGGAGGAGGAGTTGCTGG+AGG - chr5_2:5901552-5901571 None:intergenic 70.0%
GCGGGAGCTGGAGTGGTTGC+TGG - chr5_2:5901603-5901622 None:intergenic 70.0%
AGCTTGGCAGGAGCGGGAGC+TGG - chr5_2:5901615-5901634 None:intergenic 70.0%
!! CCGGGAGCGGGAGCATCTGA+TGG - chr5_2:5901675-5901694 None:intergenic 70.0%
GGTGGAGGTGAGGCAGGGGG+TGG - chr5_2:5901489-5901508 None:intergenic 75.0%
GGCAGGAGCGGGAGCTGGAG+TGG - chr5_2:5901610-5901629 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 5900776 5904394 5900776 ID=Msa0752300;Name=Msa0752300
chr5_2 mRNA 5900776 5904394 5900776 ID=Msa0752300-mRNA-1;Parent=Msa0752300;Name=Msa0752300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=356|1|1|1|0|0|2|363|228
chr5_2 exon 5900776 5901740 5900776 ID=Msa0752300-mRNA-1:exon:2468;Parent=Msa0752300-mRNA-1
chr5_2 exon 5903954 5904394 5903954 ID=Msa0752300-mRNA-1:exon:2469;Parent=Msa0752300-mRNA-1
chr5_2 five_prime_UTR 5900776 5901131 5900776 ID=Msa0752300-mRNA-1:five_prime_utr;Parent=Msa0752300-mRNA-1
chr5_2 CDS 5901132 5901740 5901132 ID=Msa0752300-mRNA-1:cds;Parent=Msa0752300-mRNA-1
chr5_2 CDS 5903954 5904031 5903954 ID=Msa0752300-mRNA-1:cds;Parent=Msa0752300-mRNA-1
chr5_2 three_prime_UTR 5904032 5904394 5904032 ID=Msa0752300-mRNA-1:three_prime_utr;Parent=Msa0752300-mRNA-1
Gene Sequence

>Msa0752300

ATGGGCACACATCATATAGTTTTGGTGGTTGGTTTGATCTGCGCTGTGTTTTCCAGCGTAGGAGCCCAACAAGCTCCATCCACCTCCCCAAACTCATCTCCAGCACCACCCACTCCTCCTGCTAATACACCTCCAACCACTCCTCAAGCCTCCCCTCCACCTGTTCAATCTTCTCCTCCACCCGTGCAGTCTTCTCCACCTCCAGTTCAGTCCTCCCCTCCACCAGCTCAGTCCACTCCCCCTCCCGTTCAGTCTTCTCCTCCACCTGTATCCGCTCCACCACCAGTTCAGCAATCTCCTCCTCCAACCCCACTCACTCCTCCACCTGTTCAGTCTACTCCACCACCTGCATCACCACCCCCTGCCTCACCTCCACCATTCTCTCCTCCCCCTGCTACTCCACCTCCCGCAACTCCACCTCCAGCAACTCCTCCTCCGGCACTCACACCTACTCCTCTCTCATCTCCTCCAGCAACCACTCCAGCTCCCGCTCCTGCCAAGCTTAAGAGTAAAGCCCCTACATTGGCACCTGTACTCTCGCCATCAGATGCTCCCGCTCCCGGACTCTCTTCTCTCTCCCCCTCTATCTCTCCCTCTGGTACCGATGATAGTGGGGCAGAGAAGTTGTGGTCACATAAGATGGTTGGATTAGTATTTGGATGTGCTTTCCTGTCCTTGCTGTTCTAG
Protein sequence

>Msa0752300

MGTHHIVLVVGLICAVFSSVGAQQAPSTSPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPVQSSPPPAQSTPPPVQSSPPPVSAPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTPLSSPPATTPAPAPAKLKSKAPTLAPVLSPSDAPAPGLSSLSPSISPSGTDDSGAEKLWSHKMVGLVFGCAFLSLLF*