AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1372690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1372690 MtrunA17_Chr5g0393641 97.980 99 2 0 130 228 125 223 9.38e-26 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 148 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGATGGTTGGATTAGTATT+TGG 0.211086 tig0019314:+31271 Msa1372690:CDS
GAGAATGGTGGAGGTGAGGC+AGG 0.243796 tig0019314:-30520 None:intergenic
GGTGGTGCTGGAGATGAGTT+TGG 0.260123 tig0019314:-30247 None:intergenic
GGGAGGCTTGAGGAGTGGTT+GGG 0.275436 tig0019314:-30291 None:intergenic
CGTTTGTGACATTCCATTAT+CGG 0.278164 tig0019314:+29861 Msa1372690:five_prime_UTR
GGAGGCTTGAGGAGTGGTTG+GGG 0.278231 tig0019314:-30290 None:intergenic
GGAGGAGTGAGTGGGGTTGG+AGG 0.298635 tig0019314:-30460 None:intergenic
CTCACTGTGATAACCGATAA+TGG 0.317247 tig0019314:-29874 None:intergenic
GGGAGGTGGATGGAGCTTGT+TGG 0.323002 tig0019314:-30225 None:intergenic
GGGGAGGCTTGAGGAGTGGT+TGG 0.324785 tig0019314:-30292 None:intergenic
GTGGTGCTGGAGATGAGTTT+GGG 0.326325 tig0019314:-30246 None:intergenic
TACATACATAATTACATATA+CGG 0.335636 tig0019314:+29949 Msa1372690:five_prime_UTR
ATTCTTGAGACATTCATTTC+AGG 0.339733 tig0019314:+31431 Msa1372690:three_prime_UTR
GTTGCTGGAGGTGGAGTTGC+GGG 0.342550 tig0019314:-30565 None:intergenic
AGTGGACTGAGCTGGTGGAG+GGG 0.345641 tig0019314:-30374 None:intergenic
GGAGGTGGATGGAGCTTGTT+GGG 0.351801 tig0019314:-30224 None:intergenic
GTTGCGGGAGGTGGAGTAGC+AGG 0.362408 tig0019314:-30550 None:intergenic
GGAGGTGGAGTTGCGGGAGG+TGG 0.365057 tig0019314:-30559 None:intergenic
GGGCACACATCATATAGTTT+TGG 0.373727 tig0019314:+30162 Msa1372690:CDS
TGGAGATGAGTTTGGGGAGG+TGG 0.375955 tig0019314:-30239 None:intergenic
TGGCATGGGAGAGGTTAAAT+AGG 0.377498 tig0019314:-29985 None:intergenic
GGTGGAGGAGTGAGTGGGGT+TGG 0.384797 tig0019314:-30463 None:intergenic
GGAGTGGACTGAGCTGGTGG+AGG 0.388176 tig0019314:-30376 None:intergenic
CTCTTAAGCTTGGCAGGAGC+GGG 0.396891 tig0019314:-30646 None:intergenic
ATATAACCTGCGCATGCAAC+TGG 0.397299 tig0019314:-30075 None:intergenic
GGAGGAGGAGATTGCTGAAC+TGG 0.403376 tig0019314:-30442 None:intergenic
GAGATTAAGCTGGAAATGTT+TGG 0.403651 tig0019314:+29894 Msa1372690:five_prime_UTR
GAGGCTTGAGGAGTGGTTGG+GGG 0.405097 tig0019314:-30289 None:intergenic
GACTTAAGAGTTTGTTGGCA+TGG 0.408106 tig0019314:-30000 None:intergenic
GGTGGAGGGGAGGACTGAAC+TGG 0.408526 tig0019314:-30361 None:intergenic
AATGGTGGAGGTGAGGCAGG+GGG 0.411793 tig0019314:-30517 None:intergenic
GGAGTGAGTGGGGTTGGAGG+AGG 0.412037 tig0019314:-30457 None:intergenic
AGAGAAGAGAGTCCGGGAGC+GGG 0.413239 tig0019314:-30712 None:intergenic
GAGTGGACTGAGCTGGTGGA+GGG 0.415952 tig0019314:-30375 None:intergenic
GCTTTACTCTTAAGCTTGGC+AGG 0.421108 tig0019314:-30652 None:intergenic
GCAGGAGGAGTGGGTGGTGC+TGG 0.425989 tig0019314:-30259 None:intergenic
TTGAAGACTTAAGAGTTTGT+TGG 0.426651 tig0019314:-30005 None:intergenic
AGCTTGGCAGGAGCGGGAGC+TGG 0.429818 tig0019314:-30640 None:intergenic
GGTGTATTAGCAGGAGGAGT+GGG 0.429888 tig0019314:-30268 None:intergenic
AGCTTGTTGGGCTCCTACGC+TGG 0.431825 tig0019314:-30212 None:intergenic
AGAAGATTGAACAGGTGGAG+GGG 0.439354 tig0019314:-30311 None:intergenic
GGTACCAGAGGGAGAGATAG+AGG 0.440833 tig0019314:-30740 None:intergenic
GAATGGTGGAGGTGAGGCAG+GGG 0.448327 tig0019314:-30518 None:intergenic
ACTGGTGGTGGAGCGGATAC+AGG 0.448600 tig0019314:-30424 None:intergenic
TTCTTGAGACATTCATTTCA+GGG 0.448618 tig0019314:+31432 Msa1372690:three_prime_UTR
AGGAGAGAATGGTGGAGGTG+AGG 0.448761 tig0019314:-30524 None:intergenic
GCGGGAGCTGGAGTAGTTGC+TGG 0.452629 tig0019314:-30628 None:intergenic
GAGAAGATTGAACAGGTGGA+GGG 0.453077 tig0019314:-30312 None:intergenic
ATAAACATGGTTGTGGTAAA+GGG 0.460444 tig0019314:-31677 None:intergenic
GGAGGAGGAGTTGCTGGAGG+TGG 0.464095 tig0019314:-30574 None:intergenic
CCATCAGATGCTCCCGCTCC+CGG 0.465627 tig0019314:+30700 Msa1372690:CDS
GGAGAAGATTGAACAGGTGG+AGG 0.466956 tig0019314:-30313 None:intergenic
GATGAGTTTGGGGAGGTGGA+TGG 0.470184 tig0019314:-30235 None:intergenic
AGAGTACAGGTGCCAATGTA+GGG 0.471479 tig0019314:-30675 None:intergenic
AGAATGGTGGAGGTGAGGCA+GGG 0.471635 tig0019314:-30519 None:intergenic
AGGTTAAATAGGCAGGATAT+AGG 0.475253 tig0019314:-29974 None:intergenic
GGAGTAGGTGTGAGTGCCGG+AGG 0.481269 tig0019314:-30592 None:intergenic
ATAAATCAAGACAATTAAGA+TGG 0.490920 tig0019314:+30141 Msa1372690:exon
GCGGGAGGTGGAGTAGCAGG+GGG 0.491257 tig0019314:-30547 None:intergenic
AGTGCCGGAGGAGGAGTTGC+TGG 0.491583 tig0019314:-30580 None:intergenic
ACTTAAGAGTTTGTTGGCAT+GGG 0.492063 tig0019314:-29999 None:intergenic
GGGTGTATTAGCAGGAGGAG+TGG 0.497326 tig0019314:-30269 None:intergenic
GAGAGTACAGGTGCCAATGT+AGG 0.499124 tig0019314:-30676 None:intergenic
ACCTCCAGCAACTCCTCCTC+CGG 0.499715 tig0019314:+30576 Msa1372690:CDS
GCATCTGATGGCGAGAGTAC+AGG 0.502597 tig0019314:-30688 None:intergenic
GGAGAAGACTGAACGGGAGG+GGG 0.504581 tig0019314:-30397 None:intergenic
GGGGAGAGAGAAGAGAGTCC+GGG 0.504838 tig0019314:-30718 None:intergenic
GGGGAGGACTGAACTGGAGG+TGG 0.505376 tig0019314:-30355 None:intergenic
AGTTGCTGGCGGAGATGAGA+GGG 0.506221 tig0019314:-30614 None:intergenic
ACGTGGGGAGACTCTACAAC+AGG 0.507489 tig0019314:+31618 Msa1372690:three_prime_UTR
GAAGTTGTGGTCACATAAGA+TGG 0.507746 tig0019314:+31255 Msa1372690:CDS
GGAGAAGACTGCACGGGTGG+AGG 0.508426 tig0019314:-30334 None:intergenic
GTACCAGAGGGAGAGATAGA+GGG 0.516796 tig0019314:-30739 None:intergenic
TGCGGGAGGTGGAGTAGCAG+GGG 0.516905 tig0019314:-30548 None:intergenic
CGATCTAGAACAGCAAGTAC+AGG 0.517402 tig0019314:-31303 None:intergenic
GGACTGAGCTGGTGGAGGGG+AGG 0.519909 tig0019314:-30371 None:intergenic
TGGAGGGGAGGCTTGAGGAG+TGG 0.522970 tig0019314:-30296 None:intergenic
TTTACGTAGTTCTGTAACGT+GGG 0.527539 tig0019314:+31602 Msa1372690:three_prime_UTR
AGAGTTTGTTGGCATGGGAG+AGG 0.528931 tig0019314:-29994 None:intergenic
AACCTGCGCATGCAACTGGC+AGG 0.529095 tig0019314:-30071 None:intergenic
GAGAGAAGAGAGTCCGGGAG+CGG 0.529145 tig0019314:-30713 None:intergenic
GGAGGGGAGGACTGAACTGG+AGG 0.529701 tig0019314:-30358 None:intergenic
TGGTGCTGGAGATGAGTTTG+GGG 0.531907 tig0019314:-30245 None:intergenic
ATGGGAGAGGTTAAATAGGC+AGG 0.534071 tig0019314:-29981 None:intergenic
GAGAAAATAATAATATATAG+AGG 0.534434 tig0019314:-31367 None:intergenic
AGGAGAAGACTGAACGGGAG+GGG 0.536416 tig0019314:-30398 None:intergenic
GGTGGAGAAGACTGCACGGG+TGG 0.537106 tig0019314:-30337 None:intergenic
AAAAGAAAGCAACGAATGGA+TGG 0.538134 tig0019314:-31514 None:intergenic
GGCGGAGATGAGAGGGGAGT+AGG 0.538476 tig0019314:-30607 None:intergenic
GGAGGAGAAGATTGAACAGG+TGG 0.538673 tig0019314:-30316 None:intergenic
GGAGGAGAAGACTGAACGGG+AGG 0.539000 tig0019314:-30400 None:intergenic
GGTGGAGGAGAAGACTGAAC+GGG 0.540730 tig0019314:-30403 None:intergenic
TTGTGGTCACATAAGATGGT+TGG 0.542769 tig0019314:+31259 Msa1372690:CDS
ACTCTTAAGCTTGGCAGGAG+CGG 0.544295 tig0019314:-30647 None:intergenic
TTGCGGGAGGTGGAGTAGCA+GGG 0.544392 tig0019314:-30549 None:intergenic
GGTGGAGGAGAAGATTGAAC+AGG 0.545453 tig0019314:-30319 None:intergenic
AGTTGCTGGAGGTGGAGTTG+CGG 0.545853 tig0019314:-30566 None:intergenic
GGATCCACCAGGGGTGAAAG+AGG 0.546166 tig0019314:+29816 None:intergenic
GTAGGTGTGAGTGCCGGAGG+AGG 0.548715 tig0019314:-30589 None:intergenic
GTATTAGCAGGAGGAGTGGG+TGG 0.549613 tig0019314:-30265 None:intergenic
GGTGGTGGAGTAGACTGAAC+AGG 0.557587 tig0019314:-30484 None:intergenic
TGAACAGGTGGAGGAGTGAG+TGG 0.558370 tig0019314:-30469 None:intergenic
GAGGAGAAGACTGAACGGGA+GGG 0.560092 tig0019314:-30399 None:intergenic
TGCTGGAGATGAGTTTGGGG+AGG 0.562310 tig0019314:-30242 None:intergenic
TTATCACAGTGAGATTAAGC+TGG 0.562741 tig0019314:+29884 Msa1372690:five_prime_UTR
TGAGACATTCATTTCAGGGG+AGG 0.568142 tig0019314:+31436 Msa1372690:three_prime_UTR
ACAATGACCTCTTTCACCCC+TGG 0.570301 tig0019314:-29823 None:intergenic
GCTGGAGGTGGAGTTGCGGG+AGG 0.571892 tig0019314:-30562 None:intergenic
AGGGGCTTTACTCTTAAGCT+TGG 0.573619 tig0019314:-30656 None:intergenic
AGGGGAGTAGGTGTGAGTGC+CGG 0.575858 tig0019314:-30595 None:intergenic
CCGGGAGCGGGAGCATCTGA+TGG 0.577356 tig0019314:-30700 None:intergenic
TAAATCAAGACAATTAAGAT+GGG 0.584084 tig0019314:+30142 Msa1372690:exon
ACAGGTGGAGGGGAGGCTTG+AGG 0.584481 tig0019314:-30301 None:intergenic
GGAGATTGCTGAACTGGTGG+TGG 0.584891 tig0019314:-30436 None:intergenic
ATGACCTCTTTCACCCCTGG+TGG 0.588469 tig0019314:-29820 None:intergenic
TAGTTGCTGGCGGAGATGAG+AGG 0.590762 tig0019314:-30615 None:intergenic
ATTCAAAAGAAAGCAACGAA+TGG 0.591030 tig0019314:-31518 None:intergenic
AGATTGAACAGGTGGAGGGG+AGG 0.591929 tig0019314:-30308 None:intergenic
GAACAGGTGGAGGAGTGAGT+GGG 0.591944 tig0019314:-30468 None:intergenic
TACCAGAGGGAGAGATAGAG+GGG 0.596413 tig0019314:-30738 None:intergenic
GGTGGAGCGGATACAGGTGG+AGG 0.597066 tig0019314:-30418 None:intergenic
GAGAAGTGAACTTACATCAT+CGG 0.598885 tig0019314:-30761 None:intergenic
GGAGTAGACTGAACAGGTGG+AGG 0.602159 tig0019314:-30478 None:intergenic
TAAGAGTAAAGCCCCTACAT+TGG 0.608658 tig0019314:+30663 Msa1372690:CDS
GGTGGTGGAGCGGATACAGG+TGG 0.611309 tig0019314:-30421 None:intergenic
TCTTGAGACATTCATTTCAG+GGG 0.612581 tig0019314:+31433 Msa1372690:three_prime_UTR
GCCGGAGGAGGAGTTGCTGG+AGG 0.626597 tig0019314:-30577 None:intergenic
AGGTGGAGGAGAAGACTGAA+CGG 0.627967 tig0019314:-30404 None:intergenic
ATTTACGTAGTTCTGTAACG+TGG 0.629666 tig0019314:+31601 Msa1372690:three_prime_UTR
GACCTGCCAGTTGCATGCGC+AGG 0.636482 tig0019314:+30069 Msa1372690:five_prime_UTR
TGAGGCAGTGGGATCCACCA+GGG 0.639800 tig0019314:+29806 None:intergenic
TGGAGGTGGAGAAGACTGCA+CGG 0.644717 tig0019314:-30341 None:intergenic
GGAGGTGGAGAAGACTGCAC+GGG 0.646719 tig0019314:-30340 None:intergenic
AGAGTGGGGCAGAGAAGTTG+TGG 0.650807 tig0019314:+31242 Msa1372690:intron
GAGTACAGGTGCCAATGTAG+GGG 0.651058 tig0019314:-30674 None:intergenic
GGAGGAGATTGCTGAACTGG+TGG 0.653228 tig0019314:-30439 None:intergenic
ATGTATATATCATGATCATG+AGG 0.655894 tig0019314:-29931 None:intergenic
GAGTTCTGAAGAGAAGACAG+AGG 0.658474 tig0019314:-31329 None:intergenic
GAGGCAGTGGGATCCACCAG+GGG 0.660048 tig0019314:+29807 None:intergenic
AACAGGTGGAGGAGTGAGTG+GGG 0.663660 tig0019314:-30467 None:intergenic
GGAGCTGGAGTAGTTGCTGG+CGG 0.665527 tig0019314:-30625 None:intergenic
TTGCTGAACTGGTGGTGGAG+CGG 0.669656 tig0019314:-30431 None:intergenic
ACTTACATCATCGGTACCAG+AGG 0.669772 tig0019314:-30752 None:intergenic
CTTACATCATCGGTACCAGA+GGG 0.676343 tig0019314:-30751 None:intergenic
GGTGGAGTAGACTGAACAGG+TGG 0.681346 tig0019314:-30481 None:intergenic
GTTGCTGGCGGAGATGAGAG+GGG 0.685759 tig0019314:-30613 None:intergenic
TTACGTAGTTCTGTAACGTG+GGG 0.688815 tig0019314:+31603 Msa1372690:three_prime_UTR
ACCAGAGGGAGAGATAGAGG+GGG 0.699318 tig0019314:-30737 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATATTAATATGACA+TGG - tig0019314:30882-30901 None:intergenic 10.0%
!!! TTAAACATGTTTTTTTAATT+AGG - tig0019314:31103-31122 None:intergenic 10.0%
!! TAAAAAATATTAATATGACA+TGG - tig0019314:30882-30901 None:intergenic 10.0%
!!! TTAAACATGTTTTTTTAATT+AGG - tig0019314:31103-31122 None:intergenic 10.0%
!! TACATACATAATTACATATA+CGG + tig0019314:29949-29968 Msa1372690:five_prime_UTR 15.0%
!! GAGAAAATAATAATATATAG+AGG - tig0019314:31370-31389 None:intergenic 15.0%
!! TACATACATAATTACATATA+CGG + tig0019314:29949-29968 Msa1372690:five_prime_UTR 15.0%
!! GAGAAAATAATAATATATAG+AGG - tig0019314:31370-31389 None:intergenic 15.0%
!! ATAAATCAAGACAATTAAGA+TGG + tig0019314:30141-30160 Msa1372690:exon 20.0%
!! TAAATCAAGACAATTAAGAT+GGG + tig0019314:30142-30161 Msa1372690:exon 20.0%
!!! ACTAACTAGGTTTTTAATAT+TGG + tig0019314:30813-30832 Msa1372690:intron 20.0%
!! AAAATCAAATTGTAAGGTAA+CGG + tig0019314:30853-30872 Msa1372690:intron 20.0%
!!! TGGTATTTTCAATACTAATA+AGG + tig0019314:30977-30996 Msa1372690:intron 20.0%
!! TTTGGAGATCAAATATATTT+CGG + tig0019314:31053-31072 Msa1372690:intron 20.0%
!!! CATGTTTTTTTAATTAGGAA+AGG - tig0019314:31098-31117 None:intergenic 20.0%
!! AATAGATAAAGTAGAAGAAA+AGG - tig0019314:31144-31163 None:intergenic 20.0%
!!! TTAGACTAATTAAGTTTTGT+GGG + tig0019314:31201-31220 Msa1372690:intron 20.0%
!!! ACAACTTAGTTTTAATCTAA+TGG - tig0019314:31646-31665 None:intergenic 20.0%
!! ATAAATCAAGACAATTAAGA+TGG + tig0019314:30141-30160 Msa1372690:exon 20.0%
!! TAAATCAAGACAATTAAGAT+GGG + tig0019314:30142-30161 Msa1372690:exon 20.0%
!!! ACTAACTAGGTTTTTAATAT+TGG + tig0019314:30813-30832 Msa1372690:intron 20.0%
!! AAAATCAAATTGTAAGGTAA+CGG + tig0019314:30853-30872 Msa1372690:intron 20.0%
!!! TGGTATTTTCAATACTAATA+AGG + tig0019314:30977-30996 Msa1372690:intron 20.0%
!! TTTGGAGATCAAATATATTT+CGG + tig0019314:31053-31072 Msa1372690:intron 20.0%
!!! CATGTTTTTTTAATTAGGAA+AGG - tig0019314:31098-31117 None:intergenic 20.0%
!! AATAGATAAAGTAGAAGAAA+AGG - tig0019314:31144-31163 None:intergenic 20.0%
!!! TTAGACTAATTAAGTTTTGT+GGG + tig0019314:31201-31220 Msa1372690:intron 20.0%
!!! ACAACTTAGTTTTAATCTAA+TGG - tig0019314:31646-31665 None:intergenic 20.0%
! ATGTATATATCATGATCATG+AGG - tig0019314:29934-29953 None:intergenic 25.0%
! ATCACTACTAATTACTAACT+AGG + tig0019314:30800-30819 Msa1372690:intron 25.0%
!!! CCTTACAATTTGATTTTGTA+AGG - tig0019314:30850-30869 None:intergenic 25.0%
! CCTTACAAAATCAAATTGTA+AGG + tig0019314:30847-30866 Msa1372690:intron 25.0%
! AAATCAAATTGTAAGGTAAC+GGG + tig0019314:30854-30873 Msa1372690:intron 25.0%
! TTGATATGAGTCAAACTAAA+GGG - tig0019314:31026-31045 None:intergenic 25.0%
! TTTGATATGAGTCAAACTAA+AGG - tig0019314:31027-31046 None:intergenic 25.0%
!!! ACTCATATCAAAGCTTTATT+TGG + tig0019314:31035-31054 Msa1372690:intron 25.0%
! AGATCAAATATATTTCGGTT+CGG + tig0019314:31058-31077 Msa1372690:intron 25.0%
! TATCTGTTTGCATCAAAATT+TGG - tig0019314:31173-31192 None:intergenic 25.0%
!! GTTAGACTAATTAAGTTTTG+TGG + tig0019314:31200-31219 Msa1372690:intron 25.0%
!! ATTATTTTCTCGATGTGATA+TGG + tig0019314:31379-31398 Msa1372690:three_prime_UTR 25.0%
!! TTATTTTCTCGATGTGATAT+GGG + tig0019314:31380-31399 Msa1372690:three_prime_UTR 25.0%
! ATGTATATATCATGATCATG+AGG - tig0019314:29934-29953 None:intergenic 25.0%
! ATCACTACTAATTACTAACT+AGG + tig0019314:30800-30819 Msa1372690:intron 25.0%
!!! CCTTACAATTTGATTTTGTA+AGG - tig0019314:30850-30869 None:intergenic 25.0%
! CCTTACAAAATCAAATTGTA+AGG + tig0019314:30847-30866 Msa1372690:intron 25.0%
! AAATCAAATTGTAAGGTAAC+GGG + tig0019314:30854-30873 Msa1372690:intron 25.0%
! TTGATATGAGTCAAACTAAA+GGG - tig0019314:31026-31045 None:intergenic 25.0%
! TTTGATATGAGTCAAACTAA+AGG - tig0019314:31027-31046 None:intergenic 25.0%
!!! ACTCATATCAAAGCTTTATT+TGG + tig0019314:31035-31054 Msa1372690:intron 25.0%
! AGATCAAATATATTTCGGTT+CGG + tig0019314:31058-31077 Msa1372690:intron 25.0%
! TATCTGTTTGCATCAAAATT+TGG - tig0019314:31173-31192 None:intergenic 25.0%
!! GTTAGACTAATTAAGTTTTG+TGG + tig0019314:31200-31219 Msa1372690:intron 25.0%
!! ATTATTTTCTCGATGTGATA+TGG + tig0019314:31379-31398 Msa1372690:three_prime_UTR 25.0%
!! TTATTTTCTCGATGTGATAT+GGG + tig0019314:31380-31399 Msa1372690:three_prime_UTR 25.0%
TTGAAGACTTAAGAGTTTGT+TGG - tig0019314:30008-30027 None:intergenic 30.0%
TGATATGAGTCAAACTAAAG+GGG - tig0019314:31025-31044 None:intergenic 30.0%
TATTATATTGCATTGCAGAG+TGG + tig0019314:31226-31245 Msa1372690:intron 30.0%
ATTATATTGCATTGCAGAGT+GGG + tig0019314:31227-31246 Msa1372690:intron 30.0%
!! AAGATGGTTGGATTAGTATT+TGG + tig0019314:31271-31290 Msa1372690:CDS 30.0%
ATTCTTGAGACATTCATTTC+AGG + tig0019314:31431-31450 Msa1372690:three_prime_UTR 30.0%
TTCTTGAGACATTCATTTCA+GGG + tig0019314:31432-31451 Msa1372690:three_prime_UTR 30.0%
ATTCAAAAGAAAGCAACGAA+TGG - tig0019314:31521-31540 None:intergenic 30.0%
TTGAAGACTTAAGAGTTTGT+TGG - tig0019314:30008-30027 None:intergenic 30.0%
TGATATGAGTCAAACTAAAG+GGG - tig0019314:31025-31044 None:intergenic 30.0%
TATTATATTGCATTGCAGAG+TGG + tig0019314:31226-31245 Msa1372690:intron 30.0%
ATTATATTGCATTGCAGAGT+GGG + tig0019314:31227-31246 Msa1372690:intron 30.0%
!! AAGATGGTTGGATTAGTATT+TGG + tig0019314:31271-31290 Msa1372690:CDS 30.0%
ATTCTTGAGACATTCATTTC+AGG + tig0019314:31431-31450 Msa1372690:three_prime_UTR 30.0%
TTCTTGAGACATTCATTTCA+GGG + tig0019314:31432-31451 Msa1372690:three_prime_UTR 30.0%
ATTCAAAAGAAAGCAACGAA+TGG - tig0019314:31521-31540 None:intergenic 30.0%
CGTTTGTGACATTCCATTAT+CGG + tig0019314:29861-29880 Msa1372690:five_prime_UTR 35.0%
TTATCACAGTGAGATTAAGC+TGG + tig0019314:29884-29903 Msa1372690:five_prime_UTR 35.0%
GAGATTAAGCTGGAAATGTT+TGG + tig0019314:29894-29913 Msa1372690:five_prime_UTR 35.0%
AGGTTAAATAGGCAGGATAT+AGG - tig0019314:29977-29996 None:intergenic 35.0%
!! ACTTAAGAGTTTGTTGGCAT+GGG - tig0019314:30002-30021 None:intergenic 35.0%
!!! CACACATCATATAGTTTTGG+TGG + tig0019314:30165-30184 Msa1372690:CDS 35.0%
!!! CATCATATAGTTTTGGTGGT+TGG + tig0019314:30169-30188 Msa1372690:CDS 35.0%
GAGAAGTGAACTTACATCAT+CGG - tig0019314:30764-30783 None:intergenic 35.0%
! TGATTTTGTAAGGACGTGTT+AGG - tig0019314:30840-30859 None:intergenic 35.0%
AAAGGGGTTGTGTATGATAT+GGG - tig0019314:31009-31028 None:intergenic 35.0%
TAAAGGGGTTGTGTATGATA+TGG - tig0019314:31010-31029 None:intergenic 35.0%
TTATATTGCATTGCAGAGTG+GGG + tig0019314:31228-31247 Msa1372690:intron 35.0%
TCTTGAGACATTCATTTCAG+GGG + tig0019314:31433-31452 Msa1372690:three_prime_UTR 35.0%
!! GGGAGGTTTTGTATTAATTG+AGG + tig0019314:31453-31472 Msa1372690:three_prime_UTR 35.0%
AAAAGAAAGCAACGAATGGA+TGG - tig0019314:31517-31536 None:intergenic 35.0%
! ATTTACGTAGTTCTGTAACG+TGG + tig0019314:31601-31620 Msa1372690:three_prime_UTR 35.0%
! TTTACGTAGTTCTGTAACGT+GGG + tig0019314:31602-31621 Msa1372690:three_prime_UTR 35.0%
CGTTTGTGACATTCCATTAT+CGG + tig0019314:29861-29880 Msa1372690:five_prime_UTR 35.0%
TTATCACAGTGAGATTAAGC+TGG + tig0019314:29884-29903 Msa1372690:five_prime_UTR 35.0%
GAGATTAAGCTGGAAATGTT+TGG + tig0019314:29894-29913 Msa1372690:five_prime_UTR 35.0%
AGGTTAAATAGGCAGGATAT+AGG - tig0019314:29977-29996 None:intergenic 35.0%
!! ACTTAAGAGTTTGTTGGCAT+GGG - tig0019314:30002-30021 None:intergenic 35.0%
!!! CACACATCATATAGTTTTGG+TGG + tig0019314:30165-30184 Msa1372690:CDS 35.0%
!!! CATCATATAGTTTTGGTGGT+TGG + tig0019314:30169-30188 Msa1372690:CDS 35.0%
GAGAAGTGAACTTACATCAT+CGG - tig0019314:30764-30783 None:intergenic 35.0%
! TGATTTTGTAAGGACGTGTT+AGG - tig0019314:30840-30859 None:intergenic 35.0%
AAAGGGGTTGTGTATGATAT+GGG - tig0019314:31009-31028 None:intergenic 35.0%
TAAAGGGGTTGTGTATGATA+TGG - tig0019314:31010-31029 None:intergenic 35.0%
TTATATTGCATTGCAGAGTG+GGG + tig0019314:31228-31247 Msa1372690:intron 35.0%
TCTTGAGACATTCATTTCAG+GGG + tig0019314:31433-31452 Msa1372690:three_prime_UTR 35.0%
!! GGGAGGTTTTGTATTAATTG+AGG + tig0019314:31453-31472 Msa1372690:three_prime_UTR 35.0%
AAAAGAAAGCAACGAATGGA+TGG - tig0019314:31517-31536 None:intergenic 35.0%
! ATTTACGTAGTTCTGTAACG+TGG + tig0019314:31601-31620 Msa1372690:three_prime_UTR 35.0%
! TTTACGTAGTTCTGTAACGT+GGG + tig0019314:31602-31621 Msa1372690:three_prime_UTR 35.0%
CTCACTGTGATAACCGATAA+TGG - tig0019314:29877-29896 None:intergenic 40.0%
!! GACTTAAGAGTTTGTTGGCA+TGG - tig0019314:30003-30022 None:intergenic 40.0%
! GGGCACACATCATATAGTTT+TGG + tig0019314:30162-30181 Msa1372690:CDS 40.0%
TAAGAGTAAAGCCCCTACAT+TGG + tig0019314:30663-30682 Msa1372690:CDS 40.0%
ATGCGTGCATCTCTCTATAA+AGG + tig0019314:30951-30970 Msa1372690:intron 40.0%
GCATCTCTCTATAAAGGTCT+TGG + tig0019314:30957-30976 Msa1372690:intron 40.0%
AAGGGGTTGTGTATGATATG+GGG - tig0019314:31008-31027 None:intergenic 40.0%
GAAGTTGTGGTCACATAAGA+TGG + tig0019314:31255-31274 Msa1372690:CDS 40.0%
TTGTGGTCACATAAGATGGT+TGG + tig0019314:31259-31278 Msa1372690:CDS 40.0%
! TTACGTAGTTCTGTAACGTG+GGG + tig0019314:31603-31622 Msa1372690:three_prime_UTR 40.0%
CTCACTGTGATAACCGATAA+TGG - tig0019314:29877-29896 None:intergenic 40.0%
!! GACTTAAGAGTTTGTTGGCA+TGG - tig0019314:30003-30022 None:intergenic 40.0%
! GGGCACACATCATATAGTTT+TGG + tig0019314:30162-30181 Msa1372690:CDS 40.0%
TAAGAGTAAAGCCCCTACAT+TGG + tig0019314:30663-30682 Msa1372690:CDS 40.0%
ATGCGTGCATCTCTCTATAA+AGG + tig0019314:30951-30970 Msa1372690:intron 40.0%
GCATCTCTCTATAAAGGTCT+TGG + tig0019314:30957-30976 Msa1372690:intron 40.0%
AAGGGGTTGTGTATGATATG+GGG - tig0019314:31008-31027 None:intergenic 40.0%
GAAGTTGTGGTCACATAAGA+TGG + tig0019314:31255-31274 Msa1372690:CDS 40.0%
TTGTGGTCACATAAGATGGT+TGG + tig0019314:31259-31278 Msa1372690:CDS 40.0%
! TTACGTAGTTCTGTAACGTG+GGG + tig0019314:31603-31622 Msa1372690:three_prime_UTR 40.0%
ATGGGAGAGGTTAAATAGGC+AGG - tig0019314:29984-30003 None:intergenic 45.0%
TGGCATGGGAGAGGTTAAAT+AGG - tig0019314:29988-30007 None:intergenic 45.0%
ATATAACCTGCGCATGCAAC+TGG - tig0019314:30078-30097 None:intergenic 45.0%
AGAAGATTGAACAGGTGGAG+GGG - tig0019314:30314-30333 None:intergenic 45.0%
GAGAAGATTGAACAGGTGGA+GGG - tig0019314:30315-30334 None:intergenic 45.0%
GCTTTACTCTTAAGCTTGGC+AGG - tig0019314:30655-30674 None:intergenic 45.0%
AGGGGCTTTACTCTTAAGCT+TGG - tig0019314:30659-30678 None:intergenic 45.0%
AGAGTACAGGTGCCAATGTA+GGG - tig0019314:30678-30697 None:intergenic 45.0%
CTTACATCATCGGTACCAGA+GGG - tig0019314:30754-30773 None:intergenic 45.0%
ACTTACATCATCGGTACCAG+AGG - tig0019314:30755-30774 None:intergenic 45.0%
! CGATCTAGAACAGCAAGTAC+AGG - tig0019314:31306-31325 None:intergenic 45.0%
!! GAGTTCTGAAGAGAAGACAG+AGG - tig0019314:31332-31351 None:intergenic 45.0%
TGAGACATTCATTTCAGGGG+AGG + tig0019314:31436-31455 Msa1372690:three_prime_UTR 45.0%
ATGGGAGAGGTTAAATAGGC+AGG - tig0019314:29984-30003 None:intergenic 45.0%
TGGCATGGGAGAGGTTAAAT+AGG - tig0019314:29988-30007 None:intergenic 45.0%
ATATAACCTGCGCATGCAAC+TGG - tig0019314:30078-30097 None:intergenic 45.0%
AGAAGATTGAACAGGTGGAG+GGG - tig0019314:30314-30333 None:intergenic 45.0%
GAGAAGATTGAACAGGTGGA+GGG - tig0019314:30315-30334 None:intergenic 45.0%
GCTTTACTCTTAAGCTTGGC+AGG - tig0019314:30655-30674 None:intergenic 45.0%
AGGGGCTTTACTCTTAAGCT+TGG - tig0019314:30659-30678 None:intergenic 45.0%
AGAGTACAGGTGCCAATGTA+GGG - tig0019314:30678-30697 None:intergenic 45.0%
CTTACATCATCGGTACCAGA+GGG - tig0019314:30754-30773 None:intergenic 45.0%
ACTTACATCATCGGTACCAG+AGG - tig0019314:30755-30774 None:intergenic 45.0%
! CGATCTAGAACAGCAAGTAC+AGG - tig0019314:31306-31325 None:intergenic 45.0%
!! GAGTTCTGAAGAGAAGACAG+AGG - tig0019314:31332-31351 None:intergenic 45.0%
TGAGACATTCATTTCAGGGG+AGG + tig0019314:31436-31455 Msa1372690:three_prime_UTR 45.0%
ACAATGACCTCTTTCACCCC+TGG - tig0019314:29826-29845 None:intergenic 50.0%
!! AGAGTTTGTTGGCATGGGAG+AGG - tig0019314:29997-30016 None:intergenic 50.0%
! TGGTGCTGGAGATGAGTTTG+GGG - tig0019314:30248-30267 None:intergenic 50.0%
! GTGGTGCTGGAGATGAGTTT+GGG - tig0019314:30249-30268 None:intergenic 50.0%
GGTGTATTAGCAGGAGGAGT+GGG - tig0019314:30271-30290 None:intergenic 50.0%
GGAGAAGATTGAACAGGTGG+AGG - tig0019314:30316-30335 None:intergenic 50.0%
GGAGGAGAAGATTGAACAGG+TGG - tig0019314:30319-30338 None:intergenic 50.0%
GGTGGAGGAGAAGATTGAAC+AGG - tig0019314:30322-30341 None:intergenic 50.0%
AGGTGGAGGAGAAGACTGAA+CGG - tig0019314:30407-30426 None:intergenic 50.0%
ACTCTTAAGCTTGGCAGGAG+CGG - tig0019314:30650-30669 None:intergenic 50.0%
GAGTACAGGTGCCAATGTAG+GGG - tig0019314:30677-30696 None:intergenic 50.0%
! GAGAGTACAGGTGCCAATGT+AGG - tig0019314:30679-30698 None:intergenic 50.0%
TACCAGAGGGAGAGATAGAG+GGG - tig0019314:30741-30760 None:intergenic 50.0%
GTACCAGAGGGAGAGATAGA+GGG - tig0019314:30742-30761 None:intergenic 50.0%
ACAATGACCTCTTTCACCCC+TGG - tig0019314:29826-29845 None:intergenic 50.0%
!! AGAGTTTGTTGGCATGGGAG+AGG - tig0019314:29997-30016 None:intergenic 50.0%
! TGGTGCTGGAGATGAGTTTG+GGG - tig0019314:30248-30267 None:intergenic 50.0%
! GTGGTGCTGGAGATGAGTTT+GGG - tig0019314:30249-30268 None:intergenic 50.0%
GGTGTATTAGCAGGAGGAGT+GGG - tig0019314:30271-30290 None:intergenic 50.0%
GGAGAAGATTGAACAGGTGG+AGG - tig0019314:30316-30335 None:intergenic 50.0%
GGAGGAGAAGATTGAACAGG+TGG - tig0019314:30319-30338 None:intergenic 50.0%
GGTGGAGGAGAAGATTGAAC+AGG - tig0019314:30322-30341 None:intergenic 50.0%
AGGTGGAGGAGAAGACTGAA+CGG - tig0019314:30407-30426 None:intergenic 50.0%
ACTCTTAAGCTTGGCAGGAG+CGG - tig0019314:30650-30669 None:intergenic 50.0%
GAGTACAGGTGCCAATGTAG+GGG - tig0019314:30677-30696 None:intergenic 50.0%
! GAGAGTACAGGTGCCAATGT+AGG - tig0019314:30679-30698 None:intergenic 50.0%
TACCAGAGGGAGAGATAGAG+GGG - tig0019314:30741-30760 None:intergenic 50.0%
GTACCAGAGGGAGAGATAGA+GGG - tig0019314:30742-30761 None:intergenic 50.0%
! TGCGCTGTGTTTTCCAGCGT+AGG + tig0019314:30199-30218 Msa1372690:CDS 55.0%
! GGAGGTGGATGGAGCTTGTT+GGG - tig0019314:30227-30246 None:intergenic 55.0%
GATGAGTTTGGGGAGGTGGA+TGG - tig0019314:30238-30257 None:intergenic 55.0%
TGGAGATGAGTTTGGGGAGG+TGG - tig0019314:30242-30261 None:intergenic 55.0%
TGCTGGAGATGAGTTTGGGG+AGG - tig0019314:30245-30264 None:intergenic 55.0%
! GGTGGTGCTGGAGATGAGTT+TGG - tig0019314:30250-30269 None:intergenic 55.0%
GTATTAGCAGGAGGAGTGGG+TGG - tig0019314:30268-30287 None:intergenic 55.0%
GGGTGTATTAGCAGGAGGAG+TGG - tig0019314:30272-30291 None:intergenic 55.0%
! GTTGGGGGTGTATTAGCAGG+AGG - tig0019314:30277-30296 None:intergenic 55.0%
! GTGGTTGGGGGTGTATTAGC+AGG - tig0019314:30280-30299 None:intergenic 55.0%
AGATTGAACAGGTGGAGGGG+AGG - tig0019314:30311-30330 None:intergenic 55.0%
TGGAGGTGGAGAAGACTGCA+CGG - tig0019314:30344-30363 None:intergenic 55.0%
AGGAGAAGACTGAACGGGAG+GGG - tig0019314:30401-30420 None:intergenic 55.0%
GAGGAGAAGACTGAACGGGA+GGG - tig0019314:30402-30421 None:intergenic 55.0%
GGTGGAGGAGAAGACTGAAC+GGG - tig0019314:30406-30425 None:intergenic 55.0%
!! TTGCTGAACTGGTGGTGGAG+CGG - tig0019314:30434-30453 None:intergenic 55.0%
GGAGATTGCTGAACTGGTGG+TGG - tig0019314:30439-30458 None:intergenic 55.0%
GGAGGAGATTGCTGAACTGG+TGG - tig0019314:30442-30461 None:intergenic 55.0%
GGAGGAGGAGATTGCTGAAC+TGG - tig0019314:30445-30464 None:intergenic 55.0%
AACAGGTGGAGGAGTGAGTG+GGG - tig0019314:30470-30489 None:intergenic 55.0%
GAACAGGTGGAGGAGTGAGT+GGG - tig0019314:30471-30490 None:intergenic 55.0%
TGAACAGGTGGAGGAGTGAG+TGG - tig0019314:30472-30491 None:intergenic 55.0%
GGAGTAGACTGAACAGGTGG+AGG - tig0019314:30481-30500 None:intergenic 55.0%
GGTGGAGTAGACTGAACAGG+TGG - tig0019314:30484-30503 None:intergenic 55.0%
!! GGTGGTGGAGTAGACTGAAC+AGG - tig0019314:30487-30506 None:intergenic 55.0%
! AGAATGGTGGAGGTGAGGCA+GGG - tig0019314:30522-30541 None:intergenic 55.0%
! AGGAGAGAATGGTGGAGGTG+AGG - tig0019314:30527-30546 None:intergenic 55.0%
AGTTGCTGGAGGTGGAGTTG+CGG - tig0019314:30569-30588 None:intergenic 55.0%
AGTTGCTGGCGGAGATGAGA+GGG - tig0019314:30617-30636 None:intergenic 55.0%
TAGTTGCTGGCGGAGATGAG+AGG - tig0019314:30618-30637 None:intergenic 55.0%
CTCTTAAGCTTGGCAGGAGC+GGG - tig0019314:30649-30668 None:intergenic 55.0%
! GCATCTGATGGCGAGAGTAC+AGG - tig0019314:30691-30710 None:intergenic 55.0%
ACCAGAGGGAGAGATAGAGG+GGG - tig0019314:30740-30759 None:intergenic 55.0%
GGTACCAGAGGGAGAGATAG+AGG - tig0019314:30743-30762 None:intergenic 55.0%
AGAGTGGGGCAGAGAAGTTG+TGG + tig0019314:31242-31261 Msa1372690:intron 55.0%
ACGTGGGGAGACTCTACAAC+AGG + tig0019314:31618-31637 Msa1372690:three_prime_UTR 55.0%
ATGACCTCTTTCACCCCTGG+TGG - tig0019314:29823-29842 None:intergenic 55.0%
! TGCGCTGTGTTTTCCAGCGT+AGG + tig0019314:30199-30218 Msa1372690:CDS 55.0%
! GGAGGTGGATGGAGCTTGTT+GGG - tig0019314:30227-30246 None:intergenic 55.0%
GATGAGTTTGGGGAGGTGGA+TGG - tig0019314:30238-30257 None:intergenic 55.0%
TGGAGATGAGTTTGGGGAGG+TGG - tig0019314:30242-30261 None:intergenic 55.0%
TGCTGGAGATGAGTTTGGGG+AGG - tig0019314:30245-30264 None:intergenic 55.0%
! GGTGGTGCTGGAGATGAGTT+TGG - tig0019314:30250-30269 None:intergenic 55.0%
GTATTAGCAGGAGGAGTGGG+TGG - tig0019314:30268-30287 None:intergenic 55.0%
GGGTGTATTAGCAGGAGGAG+TGG - tig0019314:30272-30291 None:intergenic 55.0%
! GTTGGGGGTGTATTAGCAGG+AGG - tig0019314:30277-30296 None:intergenic 55.0%
! GTGGTTGGGGGTGTATTAGC+AGG - tig0019314:30280-30299 None:intergenic 55.0%
AGATTGAACAGGTGGAGGGG+AGG - tig0019314:30311-30330 None:intergenic 55.0%
TGGAGGTGGAGAAGACTGCA+CGG - tig0019314:30344-30363 None:intergenic 55.0%
AGGAGAAGACTGAACGGGAG+GGG - tig0019314:30401-30420 None:intergenic 55.0%
GAGGAGAAGACTGAACGGGA+GGG - tig0019314:30402-30421 None:intergenic 55.0%
GGTGGAGGAGAAGACTGAAC+GGG - tig0019314:30406-30425 None:intergenic 55.0%
!! TTGCTGAACTGGTGGTGGAG+CGG - tig0019314:30434-30453 None:intergenic 55.0%
GGAGATTGCTGAACTGGTGG+TGG - tig0019314:30439-30458 None:intergenic 55.0%
GGAGGAGATTGCTGAACTGG+TGG - tig0019314:30442-30461 None:intergenic 55.0%
GGAGGAGGAGATTGCTGAAC+TGG - tig0019314:30445-30464 None:intergenic 55.0%
AACAGGTGGAGGAGTGAGTG+GGG - tig0019314:30470-30489 None:intergenic 55.0%
GAACAGGTGGAGGAGTGAGT+GGG - tig0019314:30471-30490 None:intergenic 55.0%
TGAACAGGTGGAGGAGTGAG+TGG - tig0019314:30472-30491 None:intergenic 55.0%
GGAGTAGACTGAACAGGTGG+AGG - tig0019314:30481-30500 None:intergenic 55.0%
GGTGGAGTAGACTGAACAGG+TGG - tig0019314:30484-30503 None:intergenic 55.0%
!! GGTGGTGGAGTAGACTGAAC+AGG - tig0019314:30487-30506 None:intergenic 55.0%
! AGAATGGTGGAGGTGAGGCA+GGG - tig0019314:30522-30541 None:intergenic 55.0%
! AGGAGAGAATGGTGGAGGTG+AGG - tig0019314:30527-30546 None:intergenic 55.0%
AGTTGCTGGAGGTGGAGTTG+CGG - tig0019314:30569-30588 None:intergenic 55.0%
AGTTGCTGGCGGAGATGAGA+GGG - tig0019314:30617-30636 None:intergenic 55.0%
TAGTTGCTGGCGGAGATGAG+AGG - tig0019314:30618-30637 None:intergenic 55.0%
CTCTTAAGCTTGGCAGGAGC+GGG - tig0019314:30649-30668 None:intergenic 55.0%
! GCATCTGATGGCGAGAGTAC+AGG - tig0019314:30691-30710 None:intergenic 55.0%
ACCAGAGGGAGAGATAGAGG+GGG - tig0019314:30740-30759 None:intergenic 55.0%
GGTACCAGAGGGAGAGATAG+AGG - tig0019314:30743-30762 None:intergenic 55.0%
AGAGTGGGGCAGAGAAGTTG+TGG + tig0019314:31242-31261 Msa1372690:intron 55.0%
ACGTGGGGAGACTCTACAAC+AGG + tig0019314:31618-31637 Msa1372690:three_prime_UTR 55.0%
AACCTGCGCATGCAACTGGC+AGG - tig0019314:30074-30093 None:intergenic 60.0%
!! AGCTTGTTGGGCTCCTACGC+TGG - tig0019314:30215-30234 None:intergenic 60.0%
GGGAGGTGGATGGAGCTTGT+TGG - tig0019314:30228-30247 None:intergenic 60.0%
GAGGCTTGAGGAGTGGTTGG+GGG - tig0019314:30292-30311 None:intergenic 60.0%
GGAGGCTTGAGGAGTGGTTG+GGG - tig0019314:30293-30312 None:intergenic 60.0%
GGGAGGCTTGAGGAGTGGTT+GGG - tig0019314:30294-30313 None:intergenic 60.0%
GGAGGTGGAGAAGACTGCAC+GGG - tig0019314:30343-30362 None:intergenic 60.0%
!! AGTGGACTGAGCTGGTGGAG+GGG - tig0019314:30377-30396 None:intergenic 60.0%
!! GAGTGGACTGAGCTGGTGGA+GGG - tig0019314:30378-30397 None:intergenic 60.0%
GGAGAAGACTGAACGGGAGG+GGG - tig0019314:30400-30419 None:intergenic 60.0%
GGAGGAGAAGACTGAACGGG+AGG - tig0019314:30403-30422 None:intergenic 60.0%
!! ACTGGTGGTGGAGCGGATAC+AGG - tig0019314:30427-30446 None:intergenic 60.0%
! AATGGTGGAGGTGAGGCAGG+GGG - tig0019314:30520-30539 None:intergenic 60.0%
! GAATGGTGGAGGTGAGGCAG+GGG - tig0019314:30521-30540 None:intergenic 60.0%
! GAGAATGGTGGAGGTGAGGC+AGG - tig0019314:30523-30542 None:intergenic 60.0%
GTAGCAGGGGGAGGAGAGAA+TGG - tig0019314:30538-30557 None:intergenic 60.0%
TTGCGGGAGGTGGAGTAGCA+GGG - tig0019314:30552-30571 None:intergenic 60.0%
GTTGCTGGAGGTGGAGTTGC+GGG - tig0019314:30568-30587 None:intergenic 60.0%
ACCTCCAGCAACTCCTCCTC+CGG + tig0019314:30576-30595 Msa1372690:CDS 60.0%
AGGGGAGTAGGTGTGAGTGC+CGG - tig0019314:30598-30617 None:intergenic 60.0%
GTTGCTGGCGGAGATGAGAG+GGG - tig0019314:30616-30635 None:intergenic 60.0%
GGAGCTGGAGTAGTTGCTGG+CGG - tig0019314:30628-30647 None:intergenic 60.0%
AGAGAAGAGAGTCCGGGAGC+GGG - tig0019314:30715-30734 None:intergenic 60.0%
GAGAGAAGAGAGTCCGGGAG+CGG - tig0019314:30716-30735 None:intergenic 60.0%
GGGGAGAGAGAAGAGAGTCC+GGG - tig0019314:30721-30740 None:intergenic 60.0%
GGGGGAGAGAGAAGAGAGTC+CGG - tig0019314:30722-30741 None:intergenic 60.0%
TCCCCCTCTATCTCTCCCTC+TGG + tig0019314:30736-30755 Msa1372690:CDS 60.0%
AACCTGCGCATGCAACTGGC+AGG - tig0019314:30074-30093 None:intergenic 60.0%
!! AGCTTGTTGGGCTCCTACGC+TGG - tig0019314:30215-30234 None:intergenic 60.0%
GGGAGGTGGATGGAGCTTGT+TGG - tig0019314:30228-30247 None:intergenic 60.0%
GAGGCTTGAGGAGTGGTTGG+GGG - tig0019314:30292-30311 None:intergenic 60.0%
GGAGGCTTGAGGAGTGGTTG+GGG - tig0019314:30293-30312 None:intergenic 60.0%
GGGAGGCTTGAGGAGTGGTT+GGG - tig0019314:30294-30313 None:intergenic 60.0%
GGAGGTGGAGAAGACTGCAC+GGG - tig0019314:30343-30362 None:intergenic 60.0%
!! AGTGGACTGAGCTGGTGGAG+GGG - tig0019314:30377-30396 None:intergenic 60.0%
!! GAGTGGACTGAGCTGGTGGA+GGG - tig0019314:30378-30397 None:intergenic 60.0%
GGAGAAGACTGAACGGGAGG+GGG - tig0019314:30400-30419 None:intergenic 60.0%
GGAGGAGAAGACTGAACGGG+AGG - tig0019314:30403-30422 None:intergenic 60.0%
!! ACTGGTGGTGGAGCGGATAC+AGG - tig0019314:30427-30446 None:intergenic 60.0%
! AATGGTGGAGGTGAGGCAGG+GGG - tig0019314:30520-30539 None:intergenic 60.0%
! GAATGGTGGAGGTGAGGCAG+GGG - tig0019314:30521-30540 None:intergenic 60.0%
! GAGAATGGTGGAGGTGAGGC+AGG - tig0019314:30523-30542 None:intergenic 60.0%
GTAGCAGGGGGAGGAGAGAA+TGG - tig0019314:30538-30557 None:intergenic 60.0%
TTGCGGGAGGTGGAGTAGCA+GGG - tig0019314:30552-30571 None:intergenic 60.0%
GTTGCTGGAGGTGGAGTTGC+GGG - tig0019314:30568-30587 None:intergenic 60.0%
ACCTCCAGCAACTCCTCCTC+CGG + tig0019314:30576-30595 Msa1372690:CDS 60.0%
AGGGGAGTAGGTGTGAGTGC+CGG - tig0019314:30598-30617 None:intergenic 60.0%
GTTGCTGGCGGAGATGAGAG+GGG - tig0019314:30616-30635 None:intergenic 60.0%
GGAGCTGGAGTAGTTGCTGG+CGG - tig0019314:30628-30647 None:intergenic 60.0%
AGAGAAGAGAGTCCGGGAGC+GGG - tig0019314:30715-30734 None:intergenic 60.0%
GAGAGAAGAGAGTCCGGGAG+CGG - tig0019314:30716-30735 None:intergenic 60.0%
GGGGAGAGAGAAGAGAGTCC+GGG - tig0019314:30721-30740 None:intergenic 60.0%
GGGGGAGAGAGAAGAGAGTC+CGG - tig0019314:30722-30741 None:intergenic 60.0%
TCCCCCTCTATCTCTCCCTC+TGG + tig0019314:30736-30755 Msa1372690:CDS 60.0%
GACCTGCCAGTTGCATGCGC+AGG + tig0019314:30069-30088 Msa1372690:five_prime_UTR 65.0%
GGGGAGGCTTGAGGAGTGGT+TGG - tig0019314:30295-30314 None:intergenic 65.0%
TGGAGGGGAGGCTTGAGGAG+TGG - tig0019314:30299-30318 None:intergenic 65.0%
ACAGGTGGAGGGGAGGCTTG+AGG - tig0019314:30304-30323 None:intergenic 65.0%
GGAGAAGACTGCACGGGTGG+AGG - tig0019314:30337-30356 None:intergenic 65.0%
GGTGGAGAAGACTGCACGGG+TGG - tig0019314:30340-30359 None:intergenic 65.0%
GGGGAGGACTGAACTGGAGG+TGG - tig0019314:30358-30377 None:intergenic 65.0%
GGAGGGGAGGACTGAACTGG+AGG - tig0019314:30361-30380 None:intergenic 65.0%
GGTGGAGGGGAGGACTGAAC+TGG - tig0019314:30364-30383 None:intergenic 65.0%
!! GGAGTGGACTGAGCTGGTGG+AGG - tig0019314:30379-30398 None:intergenic 65.0%
AGACTGAACGGGAGGGGGAG+TGG - tig0019314:30395-30414 None:intergenic 65.0%
GGTGGAGCGGATACAGGTGG+AGG - tig0019314:30421-30440 None:intergenic 65.0%
!! GGTGGTGGAGCGGATACAGG+TGG - tig0019314:30424-30443 None:intergenic 65.0%
GGAGTGAGTGGGGTTGGAGG+AGG - tig0019314:30460-30479 None:intergenic 65.0%
GGAGGAGTGAGTGGGGTTGG+AGG - tig0019314:30463-30482 None:intergenic 65.0%
GGTGGAGGAGTGAGTGGGGT+TGG - tig0019314:30466-30485 None:intergenic 65.0%
GGGGGAGGAGAGAATGGTGG+AGG - tig0019314:30532-30551 None:intergenic 65.0%
GCAGGGGGAGGAGAGAATGG+TGG - tig0019314:30535-30554 None:intergenic 65.0%
TGCGGGAGGTGGAGTAGCAG+GGG - tig0019314:30551-30570 None:intergenic 65.0%
GTTGCGGGAGGTGGAGTAGC+AGG - tig0019314:30553-30572 None:intergenic 65.0%
GGAGGAGGAGTTGCTGGAGG+TGG - tig0019314:30577-30596 None:intergenic 65.0%
! AGTGCCGGAGGAGGAGTTGC+TGG - tig0019314:30583-30602 None:intergenic 65.0%
!! GTAGGTGTGAGTGCCGGAGG+AGG - tig0019314:30592-30611 None:intergenic 65.0%
!! GGAGTAGGTGTGAGTGCCGG+AGG - tig0019314:30595-30614 None:intergenic 65.0%
GGCGGAGATGAGAGGGGAGT+AGG - tig0019314:30610-30629 None:intergenic 65.0%
GCGGGAGCTGGAGTAGTTGC+TGG - tig0019314:30631-30650 None:intergenic 65.0%
CCATCAGATGCTCCCGCTCC+CGG + tig0019314:30700-30719 Msa1372690:CDS 65.0%
GACCTGCCAGTTGCATGCGC+AGG + tig0019314:30069-30088 Msa1372690:five_prime_UTR 65.0%
GGGGAGGCTTGAGGAGTGGT+TGG - tig0019314:30295-30314 None:intergenic 65.0%
TGGAGGGGAGGCTTGAGGAG+TGG - tig0019314:30299-30318 None:intergenic 65.0%
ACAGGTGGAGGGGAGGCTTG+AGG - tig0019314:30304-30323 None:intergenic 65.0%
GGAGAAGACTGCACGGGTGG+AGG - tig0019314:30337-30356 None:intergenic 65.0%
GGTGGAGAAGACTGCACGGG+TGG - tig0019314:30340-30359 None:intergenic 65.0%
GGGGAGGACTGAACTGGAGG+TGG - tig0019314:30358-30377 None:intergenic 65.0%
GGAGGGGAGGACTGAACTGG+AGG - tig0019314:30361-30380 None:intergenic 65.0%
GGTGGAGGGGAGGACTGAAC+TGG - tig0019314:30364-30383 None:intergenic 65.0%
!! GGAGTGGACTGAGCTGGTGG+AGG - tig0019314:30379-30398 None:intergenic 65.0%
AGACTGAACGGGAGGGGGAG+TGG - tig0019314:30395-30414 None:intergenic 65.0%
GGTGGAGCGGATACAGGTGG+AGG - tig0019314:30421-30440 None:intergenic 65.0%
!! GGTGGTGGAGCGGATACAGG+TGG - tig0019314:30424-30443 None:intergenic 65.0%
GGAGTGAGTGGGGTTGGAGG+AGG - tig0019314:30460-30479 None:intergenic 65.0%
GGAGGAGTGAGTGGGGTTGG+AGG - tig0019314:30463-30482 None:intergenic 65.0%
GGTGGAGGAGTGAGTGGGGT+TGG - tig0019314:30466-30485 None:intergenic 65.0%
GGGGGAGGAGAGAATGGTGG+AGG - tig0019314:30532-30551 None:intergenic 65.0%
GCAGGGGGAGGAGAGAATGG+TGG - tig0019314:30535-30554 None:intergenic 65.0%
TGCGGGAGGTGGAGTAGCAG+GGG - tig0019314:30551-30570 None:intergenic 65.0%
GTTGCGGGAGGTGGAGTAGC+AGG - tig0019314:30553-30572 None:intergenic 65.0%
GGAGGAGGAGTTGCTGGAGG+TGG - tig0019314:30577-30596 None:intergenic 65.0%
! AGTGCCGGAGGAGGAGTTGC+TGG - tig0019314:30583-30602 None:intergenic 65.0%
!! GTAGGTGTGAGTGCCGGAGG+AGG - tig0019314:30592-30611 None:intergenic 65.0%
!! GGAGTAGGTGTGAGTGCCGG+AGG - tig0019314:30595-30614 None:intergenic 65.0%
GGCGGAGATGAGAGGGGAGT+AGG - tig0019314:30610-30629 None:intergenic 65.0%
GCGGGAGCTGGAGTAGTTGC+TGG - tig0019314:30631-30650 None:intergenic 65.0%
CCATCAGATGCTCCCGCTCC+CGG + tig0019314:30700-30719 Msa1372690:CDS 65.0%
GCAGGAGGAGTGGGTGGTGC+TGG - tig0019314:30262-30281 None:intergenic 70.0%
GGACTGAGCTGGTGGAGGGG+AGG - tig0019314:30374-30393 None:intergenic 70.0%
!! GGGGGAGTGGACTGAGCTGG+TGG - tig0019314:30382-30401 None:intergenic 70.0%
!! GGAGGGGGAGTGGACTGAGC+TGG - tig0019314:30385-30404 None:intergenic 70.0%
! GGGGGTGGTGATGCAGGTGG+TGG - tig0019314:30502-30521 None:intergenic 70.0%
! GCAGGGGGTGGTGATGCAGG+TGG - tig0019314:30505-30524 None:intergenic 70.0%
! GAGGCAGGGGGTGGTGATGC+AGG - tig0019314:30508-30527 None:intergenic 70.0%
GGAGGTGGAGTAGCAGGGGG+AGG - tig0019314:30547-30566 None:intergenic 70.0%
GCGGGAGGTGGAGTAGCAGG+GGG - tig0019314:30550-30569 None:intergenic 70.0%
GGAGGTGGAGTTGCGGGAGG+TGG - tig0019314:30562-30581 None:intergenic 70.0%
GCTGGAGGTGGAGTTGCGGG+AGG - tig0019314:30565-30584 None:intergenic 70.0%
GCCGGAGGAGGAGTTGCTGG+AGG - tig0019314:30580-30599 None:intergenic 70.0%
AGCTTGGCAGGAGCGGGAGC+TGG - tig0019314:30643-30662 None:intergenic 70.0%
!! CCGGGAGCGGGAGCATCTGA+TGG - tig0019314:30703-30722 None:intergenic 70.0%
GCAGGAGGAGTGGGTGGTGC+TGG - tig0019314:30262-30281 None:intergenic 70.0%
GGACTGAGCTGGTGGAGGGG+AGG - tig0019314:30374-30393 None:intergenic 70.0%
!! GGGGGAGTGGACTGAGCTGG+TGG - tig0019314:30382-30401 None:intergenic 70.0%
!! GGAGGGGGAGTGGACTGAGC+TGG - tig0019314:30385-30404 None:intergenic 70.0%
! GGGGGTGGTGATGCAGGTGG+TGG - tig0019314:30502-30521 None:intergenic 70.0%
! GCAGGGGGTGGTGATGCAGG+TGG - tig0019314:30505-30524 None:intergenic 70.0%
! GAGGCAGGGGGTGGTGATGC+AGG - tig0019314:30508-30527 None:intergenic 70.0%
GGAGGTGGAGTAGCAGGGGG+AGG - tig0019314:30547-30566 None:intergenic 70.0%
GCGGGAGGTGGAGTAGCAGG+GGG - tig0019314:30550-30569 None:intergenic 70.0%
GGAGGTGGAGTTGCGGGAGG+TGG - tig0019314:30562-30581 None:intergenic 70.0%
GCTGGAGGTGGAGTTGCGGG+AGG - tig0019314:30565-30584 None:intergenic 70.0%
GCCGGAGGAGGAGTTGCTGG+AGG - tig0019314:30580-30599 None:intergenic 70.0%
AGCTTGGCAGGAGCGGGAGC+TGG - tig0019314:30643-30662 None:intergenic 70.0%
!! CCGGGAGCGGGAGCATCTGA+TGG - tig0019314:30703-30722 None:intergenic 70.0%
GGTGGAGGTGAGGCAGGGGG+TGG - tig0019314:30517-30536 None:intergenic 75.0%
GGTGGAGGTGAGGCAGGGGG+TGG - tig0019314:30517-30536 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0019314 gene 29821 31684 29821 ID=Msa1372690;Name=Msa1372690
tig0019314 mRNA 29821 31684 29821 ID=Msa1372690-mRNA-1;Parent=Msa1372690;Name=Msa1372690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=339|1|1|1|1|1|2|363|228
tig0019314 exon 29821 30768 29821 ID=Msa1372690-mRNA-1:exon:2857;Parent=Msa1372690-mRNA-1
tig0019314 exon 31244 31684 31244 ID=Msa1372690-mRNA-1:exon:2858;Parent=Msa1372690-mRNA-1
tig0019314 five_prime_UTR 29821 30159 29821 ID=Msa1372690-mRNA-1:five_prime_utr;Parent=Msa1372690-mRNA-1
tig0019314 CDS 30160 30768 30160 ID=Msa1372690-mRNA-1:cds;Parent=Msa1372690-mRNA-1
tig0019314 CDS 31244 31321 31244 ID=Msa1372690-mRNA-1:cds;Parent=Msa1372690-mRNA-1
tig0019314 three_prime_UTR 31322 31684 31322 ID=Msa1372690-mRNA-1:three_prime_utr;Parent=Msa1372690-mRNA-1
Gene Sequence

>Msa1372690

ATGGGCACACATCATATAGTTTTGGTGGTTGGTTTGATCTGCGCTGTGTTTTCCAGCGTAGGAGCCCAACAAGCTCCATCCACCTCCCCAAACTCATCTCCAGCACCACCCACTCCTCCTGCTAATACACCCCCAACCACTCCTCAAGCCTCCCCTCCACCTGTTCAATCTTCTCCTCCACCCGTGCAGTCTTCTCCACCTCCAGTTCAGTCCTCCCCTCCACCAGCTCAGTCCACTCCCCCTCCCGTTCAGTCTTCTCCTCCACCTGTATCCGCTCCACCACCAGTTCAGCAATCTCCTCCTCCAACCCCACTCACTCCTCCACCTGTTCAGTCTACTCCACCACCTGCATCACCACCCCCTGCCTCACCTCCACCATTCTCTCCTCCCCCTGCTACTCCACCTCCCGCAACTCCACCTCCAGCAACTCCTCCTCCGGCACTCACACCTACTCCCCTCTCATCTCCGCCAGCAACTACTCCAGCTCCCGCTCCTGCCAAGCTTAAGAGTAAAGCCCCTACATTGGCACCTGTACTCTCGCCATCAGATGCTCCCGCTCCCGGACTCTCTTCTCTCTCCCCCTCTATCTCTCCCTCTGGTACCGATGATAGTGGGGCAGAGAAGTTGTGGTCACATAAGATGGTTGGATTAGTATTTGGATGTGCTTTCCTGTACTTGCTGTTCTAG
Protein sequence

>Msa1372690

MGTHHIVLVVGLICAVFSSVGAQQAPSTSPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPVQSSPPPAQSTPPPVQSSPPPVSAPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTPLSSPPATTPAPAPAKLKSKAPTLAPVLSPSDAPAPGLSSLSPSISPSGTDDSGAEKLWSHKMVGLVFGCAFLYLLF*