AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0754290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754290 MtrunA17_Chr5g0399071 98.816 591 7 0 1 591 1 591 0.0 1204
Msa0754290 MtrunA17_Chr5g0399061 74.786 583 143 3 1 580 1 582 0.0 910
Msa0754290 MtrunA17_Chr4g0056431 72.054 594 162 4 1 591 1 593 0.0 864
Msa0754290 MtrunA17_Chr4g0063591 57.168 572 219 9 11 573 8 562 0.0 577
Msa0754290 MtrunA17_Chr5g0439381 50.802 561 249 5 15 570 18 556 0.0 530
Msa0754290 MtrunA17_Chr4g0005901 45.781 557 290 8 17 570 24 571 1.33e-171 499
Msa0754290 MtrunA17_Chr7g0241741 45.781 557 290 8 17 570 14 561 9.85e-168 489
Msa0754290 MtrunA17_Chr8g0375311 43.705 556 306 4 17 570 32 582 3.00e-165 483
Msa0754290 MtrunA17_Chr3g0104011 44.444 558 298 7 17 570 14 563 3.44e-163 478
Msa0754290 MtrunA17_Chr8g0375291 43.818 550 302 4 17 564 32 576 1.46e-161 474
Msa0754290 MtrunA17_Chr8g0375341 41.889 561 317 5 17 575 32 585 4.47e-159 468
Msa0754290 MtrunA17_Chr8g0375351 42.068 561 316 5 17 575 32 585 6.38e-157 462
Msa0754290 MtrunA17_Chr5g0422881 41.918 563 318 7 25 583 20 577 2.57e-154 455
Msa0754290 MtrunA17_Chr8g0375361 42.806 556 311 4 17 570 31 581 2.62e-151 447
Msa0754290 MtrunA17_Chr8g0375321 40.787 559 322 5 17 573 29 580 2.34e-150 445
Msa0754290 MtrunA17_Chr3g0142101 40.283 566 318 9 17 579 27 575 5.04e-148 439
Msa0754290 MtrunA17_Chr8g0375331 40.981 571 327 6 6 573 4 567 5.29e-148 439
Msa0754290 MtrunA17_Chr7g0261881 40.587 579 328 7 17 590 19 586 1.77e-147 438
Msa0754290 MtrunA17_Chr3g0142091 39.930 571 320 8 14 576 15 570 1.42e-143 427
Msa0754290 MtrunA17_Chr7g0261811 40.587 579 324 8 17 588 19 584 6.30e-143 427
Msa0754290 MtrunA17_Chr7g0255621 37.828 571 340 6 21 588 16 574 2.06e-142 426
Msa0754290 MtrunA17_Chr1g0187241 39.138 557 328 5 17 570 18 566 1.29e-136 410
Msa0754290 MtrunA17_Chr7g0217461 38.632 585 339 6 11 583 10 586 1.17e-134 405
Msa0754290 MtrunA17_Chr1g0166711 39.487 585 338 6 7 588 11 582 1.52e-133 402
Msa0754290 MtrunA17_Chr1g0166791 38.095 567 336 7 7 570 10 564 9.62e-132 398
Msa0754290 MtrunA17_Chr7g0261771 38.144 582 340 8 7 582 17 584 1.01e-130 395
Msa0754290 MtrunA17_Chr4g0054891 36.555 569 341 7 7 567 92 648 4.15e-130 396
Msa0754290 MtrunA17_Chr5g0400371 37.370 578 351 7 11 583 98 669 4.18e-130 396
Msa0754290 MtrunA17_Chr7g0214461 36.804 557 337 6 14 567 67 611 5.99e-130 394
Msa0754290 MtrunA17_Chr7g0255601 37.455 550 338 5 24 570 26 572 8.88e-130 393
Msa0754290 MtrunA17_Chr7g0255611 34.940 581 367 8 17 591 23 598 4.27e-129 391
Msa0754290 MtrunA17_Chr2g0276751 37.716 578 325 10 3 570 11 563 4.82e-129 390
Msa0754290 MtrunA17_Chr1g0166741 38.779 557 323 6 17 570 19 560 5.36e-129 390
Msa0754290 MtrunA17_Chr3g0133341 37.809 566 330 7 21 578 10 561 3.14e-128 388
Msa0754290 MtrunA17_Chr7g0261791 36.815 584 353 6 5 582 9 582 2.04e-127 387
Msa0754290 MtrunA17_Chr8g0362711 38.144 582 332 6 4 570 3 571 1.63e-126 384
Msa0754290 MtrunA17_Chr4g0008651 38.095 567 332 11 10 571 18 570 5.52e-126 383
Msa0754290 MtrunA17_Chr7g0261851 37.743 567 338 6 19 580 22 578 7.28e-126 383
Msa0754290 MtrunA17_Chr1g0166771 39.612 515 293 6 42 553 8 507 1.29e-125 380
Msa0754290 MtrunA17_Chr7g0240381 38.095 567 326 11 10 571 13 559 1.75e-125 381
Msa0754290 MtrunA17_Chr4g0014841 38.569 573 317 9 11 578 15 557 9.57e-125 379
Msa0754290 MtrunA17_Chr4g0014871 38.112 572 322 8 12 578 17 561 1.49e-124 378
Msa0754290 MtrunA17_Chr7g0218851 35.144 589 357 8 8 587 29 601 2.64e-124 379
Msa0754290 MtrunA17_Chr3g0112671 38.313 569 326 10 6 570 13 560 4.59e-124 377
Msa0754290 MtrunA17_Chr4g0014791 38.276 580 323 10 4 578 8 557 6.16e-124 376
Msa0754290 MtrunA17_Chr3g0112611 36.364 572 343 9 6 570 12 569 5.08e-123 375
Msa0754290 MtrunA17_Chr5g0415961 39.024 574 317 10 17 572 16 574 2.14e-122 373
Msa0754290 MtrunA17_Chr3g0114501 37.148 568 339 10 17 577 14 570 3.19e-121 370
Msa0754290 MtrunA17_Chr1g0213711 35.951 573 349 9 17 586 14 571 1.53e-120 369
Msa0754290 MtrunA17_Chr5g0415791 36.598 582 343 11 1 570 10 577 2.18e-120 369
Msa0754290 MtrunA17_Chr4g0014781 38.324 561 313 9 17 572 21 553 2.73e-120 367
Msa0754290 MtrunA17_Chr1g0193391 36.204 569 327 11 25 583 17 559 7.55e-120 367
Msa0754290 MtrunA17_Chr2g0284701 37.018 570 342 11 17 572 24 590 8.71e-120 367
Msa0754290 MtrunA17_Chr3g0077151 38.556 568 305 11 10 570 13 543 9.75e-119 363
Msa0754290 MtrunA17_Chr7g0271221 36.283 565 334 8 25 584 17 560 1.15e-118 363
Msa0754290 MtrunA17_Chr4g0014801 38.070 570 320 8 8 572 12 553 4.89e-118 361
Msa0754290 MtrunA17_Chr7g0214731 37.148 568 333 6 24 576 60 618 8.65e-118 363
Msa0754290 MtrunA17_Chr4g0059991 31.894 602 388 8 1 588 1 594 2.15e-115 356
Msa0754290 MtrunA17_Chr8g0379971 36.851 597 337 13 17 580 12 601 7.71e-115 354
Msa0754290 MtrunA17_Chr8g0353031 36.332 567 328 8 25 578 16 562 5.40e-113 348
Msa0754290 MtrunA17_Chr4g0059971 31.959 582 378 7 2 571 10 585 8.25e-110 341
Msa0754290 MtrunA17_Chr4g0059981 31.323 597 381 10 7 584 7 593 1.67e-109 340
Msa0754290 MtrunA17_Chr1g0166731 40.693 462 262 5 112 570 9 461 3.67e-109 335
Msa0754290 MtrunA17_Chr4g0011471 35.140 535 331 6 40 567 31 556 9.29e-108 335
Msa0754290 MtrunA17_Chr8g0362781 32.709 587 373 8 3 574 6 585 1.13e-107 335
Msa0754290 MtrunA17_Chr4g0011041 32.200 559 363 5 17 567 28 578 1.93e-107 335
Msa0754290 MtrunA17_Chr8g0379991 36.505 578 320 12 46 580 1 574 1.20e-106 332
Msa0754290 MtrunA17_Chr4g0069581 37.388 559 319 11 43 591 1 538 6.37e-106 330
Msa0754290 MtrunA17_Chr7g0261661 38.254 481 277 8 115 588 3 470 3.72e-104 323
Msa0754290 MtrunA17_Chr4g0014861 38.182 440 251 7 138 572 7 430 5.66e-98 305
Msa0754290 MtrunA17_Chr8g0362801 36.247 469 276 9 115 570 3 461 2.04e-95 300
Msa0754290 MtrunA17_Chr7g0261751 37.037 486 250 7 7 451 17 487 3.60e-95 301
Msa0754290 MtrunA17_Chr2g0331471 32.860 563 343 14 21 567 86 629 1.70e-94 304
Msa0754290 MtrunA17_Chr3g0082631 37.471 435 264 5 149 576 32 465 2.93e-94 297
Msa0754290 MtrunA17_Chr4g0003761 31.162 568 360 12 29 583 34 583 4.68e-93 298
Msa0754290 MtrunA17_Chr2g0331511 31.818 572 357 12 11 567 9 562 1.14e-91 295
Msa0754290 MtrunA17_Chr2g0331481 31.294 572 356 13 14 567 14 566 3.89e-91 294
Msa0754290 MtrunA17_Chr8g0390331 32.661 545 345 8 29 564 19 550 4.89e-90 289
Msa0754290 MtrunA17_Chr2g0331521 29.016 579 384 11 25 590 22 586 5.71e-90 289
Msa0754290 MtrunA17_Chr1g0157601 32.065 552 357 11 23 567 13 553 3.28e-89 286
Msa0754290 MtrunA17_Chr2g0325961 33.752 557 331 11 26 571 20 549 8.02e-88 282
Msa0754290 MtrunA17_Chr2g0325951 32.252 555 341 12 26 571 20 548 5.37e-87 280
Msa0754290 MtrunA17_Chr1g0157611 32.671 554 347 12 25 567 16 554 1.14e-84 275
Msa0754290 MtrunA17_Chr4g0060001 29.636 577 381 12 17 580 18 582 3.57e-81 266
Msa0754290 MtrunA17_Chr1g0147631 31.181 542 352 10 29 561 29 558 2.89e-80 264
Msa0754290 MtrunA17_Chr7g0240271 29.795 584 381 12 16 585 15 583 6.74e-80 263
Msa0754290 MtrunA17_Chr2g0331461 30.580 569 364 14 14 567 14 566 7.76e-80 264
Msa0754290 MtrunA17_Chr7g0261731 40.346 347 188 5 7 349 17 348 3.08e-79 254
Msa0754290 MtrunA17_Chr6g0451841 32.007 553 316 12 43 572 23 538 9.86e-79 258
Msa0754290 MtrunA17_Chr2g0326211 30.648 571 365 11 8 571 2 548 2.07e-78 258
Msa0754290 MtrunA17_Chr1g0177591 30.175 570 344 16 14 567 33 564 1.38e-76 253
Msa0754290 MtrunA17_Chr1g0157621 31.439 528 345 11 46 567 1 517 3.76e-76 252
Msa0754290 MtrunA17_Chr7g0240281 29.310 580 387 9 23 587 22 593 7.20e-75 249
Msa0754290 MtrunA17_Chr5g0415841 31.613 465 301 8 115 570 3 459 1.78e-74 245
Msa0754290 MtrunA17_Chr3g0142111 40.956 293 168 3 17 308 38 326 1.67e-73 238
Msa0754290 MtrunA17_Chr7g0235521 32.008 478 302 11 124 589 12 478 1.17e-67 227
Msa0754290 MtrunA17_Chr7g0240181 31.590 478 304 11 124 589 12 478 3.61e-66 223
Msa0754290 MtrunA17_Chr7g0240211 31.590 478 304 11 124 589 12 478 4.63e-66 223
Msa0754290 MtrunA17_Chr7g0240131 31.590 478 304 11 124 589 12 478 1.34e-65 222
Msa0754290 MtrunA17_Chr4g0060071 39.576 283 158 4 292 571 27 299 1.41e-63 211
Msa0754290 MtrunA17_Chr1g0177611 31.193 436 269 11 142 567 21 435 1.19e-61 210
Msa0754290 MtrunA17_Chr3g0112631 39.310 290 163 7 301 586 3 283 4.13e-61 204
Msa0754290 MtrunA17_Chr7g0240151 30.672 476 293 12 124 589 12 460 4.66e-61 209
Msa0754290 MtrunA17_Chr3g0142121 38.462 286 160 7 302 584 11 283 7.88e-59 198
Msa0754290 MtrunA17_Chr1g0177631 31.881 436 266 13 142 567 21 435 3.34e-56 196
Msa0754290 MtrunA17_Chr7g0234181 32.895 456 260 12 115 567 1 413 3.33e-54 189
Msa0754290 MtrunA17_Chr7g0234381 33.188 458 262 12 112 567 3 418 7.55e-54 189
Msa0754290 MtrunA17_Chr7g0234151 32.826 460 261 12 112 567 3 418 3.45e-53 187
Msa0754290 MtrunA17_Chr7g0261721 36.493 211 130 3 375 582 5 214 1.47e-39 144
Msa0754290 MtrunA17_Chr3g0112651 34.500 200 120 3 100 292 9 204 1.08e-31 122
Msa0754290 MtrunA17_Chr2g0326221 31.513 238 134 4 335 571 15 224 9.34e-30 117
Msa0754290 MtrunA17_Chr4g0060061 38.983 118 72 0 137 254 8 125 7.98e-25 100
Msa0754290 MtrunA17_Chr1g0147591 29.500 200 128 5 154 348 9 200 8.46e-22 93.6
Msa0754290 MtrunA17_Chr4g0060051 48.387 93 48 0 17 109 14 106 1.15e-20 88.2
Msa0754290 MtrunA17_Chr7g0261671 46.078 102 51 1 7 108 18 115 1.48e-20 87.4
Msa0754290 MtrunA17_Chr4g0014851 41.667 108 63 0 12 119 17 124 1.41e-19 86.3
Msa0754290 MtrunA17_Chr1g0166721 35.938 128 72 2 8 130 3 125 5.50e-19 84.0
Msa0754290 MtrunA17_Chr7g0261831 32.515 163 97 4 257 416 4 156 2.19e-18 84.3
Msa0754290 MtrunA17_Chr3g0112661 37.500 112 68 2 12 122 17 127 1.79e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754290 AT1G12110.1 63.077 585 208 5 3 583 2 582 0.0 744
Msa0754290 AT2G26690.1 56.128 563 226 6 11 567 8 555 0.0 595
Msa0754290 AT2G26690.2 55.140 535 219 6 39 567 3 522 0.0 551
Msa0754290 AT2G26690.3 54.857 525 216 6 49 567 1 510 0.0 538
Msa0754290 AT3G21670.1 52.043 563 244 7 14 570 16 558 0.0 536
Msa0754290 AT5G01180.2 43.088 557 306 6 17 570 15 563 2.63e-166 486
Msa0754290 AT5G01180.3 43.088 557 306 6 17 570 15 563 2.63e-166 486
Msa0754290 AT5G01180.1 43.088 557 306 6 17 570 15 563 2.63e-166 486
Msa0754290 AT3G54140.1 42.857 567 310 7 7 570 8 563 7.59e-164 479
Msa0754290 AT3G54140.2 42.857 567 310 7 7 570 8 563 7.59e-164 479
Msa0754290 AT2G02040.1 42.576 559 312 5 17 573 31 582 1.12e-159 469
Msa0754290 AT1G68570.1 42.907 571 312 8 7 570 5 568 3.67e-146 435
Msa0754290 AT1G68570.2 44.156 539 289 7 39 570 5 538 1.21e-143 427
Msa0754290 AT1G62200.1 39.292 565 327 6 6 565 30 583 1.03e-136 410
Msa0754290 AT1G62200.3 38.007 592 326 8 6 565 44 626 1.18e-132 402
Msa0754290 AT1G62200.2 38.007 592 326 8 6 565 30 612 1.43e-132 401
Msa0754290 AT1G59740.1 37.986 566 332 7 14 573 28 580 4.90e-132 399
Msa0754290 AT5G46050.1 36.934 574 344 8 17 585 17 577 2.65e-126 384
Msa0754290 AT2G02020.1 37.179 546 299 6 17 561 32 534 1.03e-125 381
Msa0754290 AT4G21680.1 38.298 564 328 6 17 569 18 572 1.55e-125 382
Msa0754290 AT5G46040.1 37.238 572 343 8 17 583 17 577 3.39e-125 381
Msa0754290 AT1G32450.1 36.380 558 345 6 17 567 27 581 5.24e-125 381
Msa0754290 AT2G37900.1 36.620 568 336 7 8 570 18 566 8.33e-124 377
Msa0754290 AT3G53960.1 38.179 571 331 10 8 570 17 573 2.96e-123 376
Msa0754290 AT1G69850.1 38.004 571 335 7 16 571 14 580 1.23e-122 374
Msa0754290 AT1G33440.1 38.342 579 327 11 17 586 28 585 2.02e-121 372
Msa0754290 AT1G72140.1 36.806 576 317 8 9 573 16 555 4.93e-121 369
Msa0754290 AT5G19640.1 37.385 543 316 7 28 567 60 581 3.10e-120 369
Msa0754290 AT2G40460.1 38.204 568 327 10 7 570 8 555 1.54e-118 363
Msa0754290 AT3G54450.1 34.690 565 346 7 24 583 9 555 2.49e-118 362
Msa0754290 AT1G27040.2 38.393 560 324 7 16 569 12 556 3.51e-118 362
Msa0754290 AT5G13400.1 36.503 589 350 10 9 587 47 621 4.02e-118 364
Msa0754290 AT1G27040.1 38.393 560 324 7 16 569 16 560 4.21e-118 362
Msa0754290 AT1G69870.1 34.760 584 351 12 11 585 41 603 2.51e-113 351
Msa0754290 AT1G27040.3 39.286 532 308 7 41 569 9 528 1.03e-112 347
Msa0754290 AT1G22540.1 38.998 559 310 8 17 570 20 552 4.09e-111 343
Msa0754290 AT5G62730.1 35.689 566 332 8 17 573 46 588 1.53e-110 343
Msa0754290 AT2G37900.2 36.217 497 294 6 79 571 11 488 4.14e-109 337
Msa0754290 AT2G02020.2 35.348 546 288 9 17 561 32 513 2.57e-108 335
Msa0754290 AT1G22570.1 36.667 570 326 10 12 570 15 560 6.63e-108 335
Msa0754290 AT1G72120.1 35.902 571 330 9 8 570 10 552 1.18e-106 332
Msa0754290 AT1G22550.1 35.026 571 335 9 11 570 14 559 5.57e-106 330
Msa0754290 AT5G62730.2 35.455 550 323 8 33 573 3 529 1.45e-105 328
Msa0754290 AT1G72125.1 34.555 573 339 11 8 570 10 556 6.04e-105 328
Msa0754290 AT1G72130.1 36.331 556 299 11 25 570 23 533 1.03e-102 321
Msa0754290 AT1G18880.1 31.712 555 357 8 30 571 22 567 1.85e-101 320
Msa0754290 AT5G46050.2 36.345 476 285 8 115 585 3 465 3.64e-98 307
Msa0754290 AT1G22570.2 36.213 544 312 10 38 570 4 523 1.37e-97 308
Msa0754290 AT1G52190.1 31.892 555 359 7 25 567 19 566 1.66e-97 310
Msa0754290 AT5G62680.1 32.379 559 348 11 30 570 46 592 3.17e-95 304
Msa0754290 AT3G25260.1 33.574 554 316 11 17 567 11 515 4.05e-95 301
Msa0754290 AT3G47960.1 32.914 556 347 10 30 570 64 608 7.12e-95 304
Msa0754290 AT3G16180.1 31.866 568 367 10 13 567 5 565 1.09e-93 299
Msa0754290 AT3G25280.1 33.874 555 321 12 16 567 10 521 9.61e-90 287
Msa0754290 AT3G45660.1 30.479 584 375 9 9 590 3 557 1.39e-88 285
Msa0754290 AT3G45660.3 30.479 584 375 9 9 590 3 557 1.39e-88 285
Msa0754290 AT1G27080.1 32.628 567 347 12 29 585 16 557 1.98e-88 285
Msa0754290 AT3G45660.2 30.479 584 375 9 9 590 24 578 2.95e-88 285
Msa0754290 AT3G45710.1 29.895 572 372 12 21 588 14 560 1.14e-83 272
Msa0754290 AT1G69860.1 30.261 575 369 11 4 571 1 550 1.94e-82 269
Msa0754290 AT3G45650.1 29.676 556 362 9 23 573 15 546 4.22e-81 265
Msa0754290 AT3G45680.1 29.453 567 367 10 26 587 19 557 3.88e-80 263
Msa0754290 AT1G72130.2 35.308 439 241 9 141 569 9 414 1.53e-78 254
Msa0754290 AT1G72130.3 35.308 439 241 9 141 569 9 414 1.53e-78 254
Msa0754290 AT5G14940.1 31.627 547 321 11 43 567 23 538 3.05e-78 258
Msa0754290 AT1G27080.2 32.528 538 328 12 58 585 3 515 5.72e-78 256
Msa0754290 AT3G45720.1 29.831 533 336 11 46 570 38 540 3.07e-77 255
Msa0754290 AT3G01350.1 30.900 589 346 11 24 583 4 560 5.65e-77 254
Msa0754290 AT5G28470.2 29.159 559 372 9 25 573 15 559 1.64e-76 253
Msa0754290 AT3G45650.2 28.351 582 362 10 23 573 15 572 5.64e-76 253
Msa0754290 AT3G45700.1 29.331 583 358 15 16 584 4 546 6.55e-76 251
Msa0754290 AT5G28470.1 28.980 559 371 10 25 573 15 557 1.57e-73 245
Msa0754290 AT3G45690.1 28.780 549 323 13 26 571 17 500 3.84e-68 230
Msa0754290 AT5G11570.1 26.916 535 306 9 37 567 23 476 2.35e-53 189
Msa0754290 AT2G38100.2 26.604 530 337 13 55 573 2 490 1.12e-42 160
Msa0754290 AT2G38100.3 26.604 530 337 13 55 573 24 512 1.69e-42 160
Msa0754290 AT2G38100.1 26.604 530 337 13 55 573 18 506 2.79e-42 160

Find 168 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGCAATCCATGGTTTATT+TGG 0.146472 5_2:+7830818 None:intergenic
CTCCTTTATGCTCTGTCTAT+TGG 0.183421 5_2:-7834942 Msa0754290:CDS
TTAGAGTCTTCTTTGCATTT+TGG 0.212251 5_2:+7834127 None:intergenic
ATGTGGCATCCTTTGCTTCT+TGG 0.223376 5_2:+7833643 None:intergenic
ACTCGGCATCGCCGTTAATT+TGG 0.225881 5_2:-7835038 Msa0754290:CDS
TGAAGCTGTTTATTTGAAAA+AGG 0.227154 5_2:+7830383 None:intergenic
TCCTTTATGCTCTGTCTATT+GGG 0.231899 5_2:-7834941 Msa0754290:CDS
TGGAGAGGCCTTTATGTATA+TGG 0.257387 5_2:-7830975 Msa0754290:CDS
ATCCTTTGCTTCTTGGTCTT+AGG 0.272928 5_2:+7833650 None:intergenic
AATGTTGTTACTAATTTCTT+AGG 0.273061 5_2:-7834968 Msa0754290:CDS
CTTGACCGGTACTATGCATT+TGG 0.289091 5_2:-7835008 Msa0754290:CDS
ATGGATTGTCCAAAACATTA+TGG 0.311360 5_2:+7831360 None:intergenic
CATTATGGTTGTGGCCCATA+TGG 0.330752 5_2:+7831375 None:intergenic
TATAAATGTGGTGATATATT+TGG 0.333642 5_2:-7830738 Msa0754290:CDS
TTTCGTAAGCATAGGGTCTT+TGG 0.338269 5_2:-7833927 Msa0754290:CDS
AAATCTAGTGTCTCTGGCTT+TGG 0.347040 5_2:-7834022 Msa0754290:CDS
GGGCCACAACCATAATGTTT+TGG 0.348324 5_2:-7831369 Msa0754290:CDS
AGATGTGGAAGAAGTTAAAA+TGG 0.350382 5_2:-7831413 Msa0754290:CDS
TTGCTTGATCCGGTACTTGC+GGG 0.377777 5_2:+7833796 None:intergenic
AAGAAGTTAAAATGGTAATA+AGG 0.380191 5_2:-7831405 Msa0754290:CDS
TTCTTGAGCACACTCTCAAT+AGG 0.380892 5_2:-7830890 Msa0754290:CDS
AGATGCCATTGAGTGTGTTT+TGG 0.390364 5_2:-7831027 Msa0754290:CDS
GCCTCTACATTTCATGCATA+GGG 0.391161 5_2:-7830644 Msa0754290:exon
TGCTGAGGCGGGCATAGAAT+TGG 0.392359 5_2:-7830678 Msa0754290:CDS
CCCTTGTAATCAGATGCATC+TGG 0.396538 5_2:+7835145 None:intergenic
CAAGGTAGAGGTTGGGGTTA+CGG 0.404173 5_2:-7833869 Msa0754290:CDS
AACTTCTTCCACATCTGTTA+AGG 0.406906 5_2:+7831420 None:intergenic
TCTTGAGCACACTCTCAATA+GGG 0.411173 5_2:-7830889 Msa0754290:CDS
TCCGCGGCCGCCATGATATT+AGG 0.415550 5_2:-7835088 Msa0754290:CDS
TAATAAGGATGTTACCCATA+TGG 0.419503 5_2:-7831390 Msa0754290:CDS
CTCAGTAGTGTCCATGGTTG+CGG 0.432988 5_2:-7831119 Msa0754290:CDS
CCCAGATGCATCTGATTACA+AGG 0.434717 5_2:-7835146 Msa0754290:CDS
CAATCACAATCAAGGAGAAA+TGG 0.435261 5_2:-7831453 Msa0754290:CDS
TTTCTAAGAGAATGTCCTAA+AGG 0.437158 5_2:-7830938 Msa0754290:CDS
GTTTAATGGATATCTATTGA+TGG 0.439450 5_2:+7830405 None:intergenic
GAGATTATCTTACAATTGCT+TGG 0.439655 5_2:+7834468 None:intergenic
TTGACCGGTACTATGCATTT+GGG 0.441330 5_2:-7835007 Msa0754290:CDS
TCAATGACGGTCTTCTTAAT+CGG 0.441765 5_2:-7831259 Msa0754290:CDS
TGCCACATAGCAAACAGTTC+CGG 0.441974 5_2:-7833628 Msa0754290:intron
CTAGGGGAATTAAGTGAGTT+GGG 0.443425 5_2:+7835238 None:intergenic
GGTATGTGAAATGTGAAGCT+AGG 0.447060 5_2:+7835220 None:intergenic
TACATCACGGCCCTCGGCAC+CGG 0.448076 5_2:-7834052 Msa0754290:CDS
TCCTAATATCATGGCGGCCG+CGG 0.451996 5_2:+7835087 None:intergenic
GGTCGTAGAAAGGAACAGTT+AGG 0.460679 5_2:+7831227 None:intergenic
TTTCCCTTGTGTTGTAGGGA+GGG 0.463914 5_2:+7835174 None:intergenic
AGCAGACAGCAAGCAACTAT+TGG 0.464045 5_2:-7834092 Msa0754290:CDS
AGATAACCAAGGTAGAGGTT+GGG 0.464346 5_2:-7833876 Msa0754290:CDS
AATTTGGTCACATACTTGAC+CGG 0.465748 5_2:-7835022 Msa0754290:CDS
GGAATGAAAACTATGAGTAC+AGG 0.465946 5_2:-7830917 Msa0754290:CDS
CGGTCGTGTTTGTGGCTGCT+TGG 0.467550 5_2:-7833745 Msa0754290:CDS
TAATTGTCCCATATACATAA+AGG 0.467859 5_2:+7830967 None:intergenic
TCAGATTGCGGTCGTGTTTG+TGG 0.468178 5_2:-7833753 Msa0754290:CDS
CTCAATGGCATCTTTGCCGT+TGG 0.474314 5_2:+7831037 None:intergenic
TGCTTGGACAGCTGCAAAGA+TGG 0.474359 5_2:+7834484 None:intergenic
AAGACCGTCATTGATGCTGC+TGG 0.476879 5_2:+7831268 None:intergenic
ACAAGGGCCGGCCGGCCGAC+AGG 0.476979 5_2:-7835129 Msa0754290:CDS
CGCGGACCAACCACCGGTTG+TGG 0.478323 5_2:+7835105 None:intergenic
CACTTCTCCTCCTAATATCA+TGG 0.480052 5_2:+7835078 None:intergenic
GGTCTAAAATCTAGTGTCTC+TGG 0.480893 5_2:-7834028 Msa0754290:CDS
ACCCAATAGACAGAGCATAA+AGG 0.482538 5_2:+7834940 None:intergenic
TTCTGATGACCAAGAAAAGA+AGG 0.483279 5_2:-7833981 Msa0754290:CDS
GCTAGGGGAATTAAGTGAGT+TGG 0.483496 5_2:+7835237 None:intergenic
CCTTTACAACGCATTGGTGT+TGG 0.489948 5_2:-7831151 Msa0754290:CDS
CGAATGAAGCGGTCGTAGAA+AGG 0.491283 5_2:+7831217 None:intergenic
AATAAGGATGTTACCCATAT+GGG 0.493344 5_2:-7831389 Msa0754290:CDS
GGAGAGGCCTTTATGTATAT+GGG 0.496953 5_2:-7830974 Msa0754290:CDS
AGTCCTCTCAGTAGTGTCCA+TGG 0.500956 5_2:-7831125 Msa0754290:CDS
TATTTGTGCGGTCGCAATTG+TGG 0.501020 5_2:-7833846 Msa0754290:CDS
CAAGTATGTGACCAAATTAA+CGG 0.502223 5_2:+7835027 None:intergenic
TACCGGATCAAGCAACTTGT+TGG 0.502233 5_2:-7833788 Msa0754290:CDS
TTAAAATTCGCACGATCACA+TGG 0.502476 5_2:-7831073 Msa0754290:CDS
AAGATAACCAAGGTAGAGGT+TGG 0.503461 5_2:-7833877 Msa0754290:CDS
TTCACTCCTTTACAACGCAT+TGG 0.504068 5_2:-7831157 Msa0754290:CDS
TGTCCAAAACATTATGGTTG+TGG 0.504094 5_2:+7831366 None:intergenic
TTTATGCTCTGTCTATTGGG+TGG 0.509907 5_2:-7834938 Msa0754290:CDS
TACCAACAAGTTGCTTGATC+CGG 0.510732 5_2:+7833786 None:intergenic
ATATTTCAACAAACATTATG+TGG 0.512875 5_2:-7830466 Msa0754290:three_prime_UTR
TACCGGAACTGTTTGCTATG+TGG 0.513274 5_2:+7833626 None:intergenic
CCAACACCAATGCGTTGTAA+AGG 0.515233 5_2:+7831151 None:intergenic
GTATGTGAAATGTGAAGCTA+GGG 0.516552 5_2:+7835221 None:intergenic
ACCAACCAAAACACACTCAA+TGG 0.517641 5_2:+7831022 None:intergenic
TCGTGTTTGTGGCTGCTTGG+AGG 0.518539 5_2:-7833742 Msa0754290:CDS
TTCTTCATTGCTCTATGAAG+AGG 0.518830 5_2:-7833693 Msa0754290:CDS
AGTGAGTTGGGATGACATGA+AGG 0.519676 5_2:+7835250 None:intergenic
CCGGTTGTGGACCTGTCGGC+CGG 0.519819 5_2:+7835118 None:intergenic
GTTGCTTGATCCGGTACTTG+CGG 0.522486 5_2:+7833795 None:intergenic
TTTCTTTGTTGGGTCTGGAG+AGG 0.523163 5_2:-7830990 Msa0754290:CDS
TTGTGGACCTGTCGGCCGGC+CGG 0.524891 5_2:+7835122 None:intergenic
CCGGCCGACAGGTCCACAAC+CGG 0.525288 5_2:-7835118 Msa0754290:CDS
GCACTTTACATCACGGCCCT+CGG 0.525416 5_2:-7834058 Msa0754290:CDS
GACAAGAGACTTGCTGAGGC+GGG 0.533846 5_2:-7830689 Msa0754290:CDS
ATTGCGGATAATCTTGATCA+AGG 0.535890 5_2:-7830803 Msa0754290:CDS
GATAACCAAGGTAGAGGTTG+GGG 0.537914 5_2:-7833875 Msa0754290:CDS
ATCTGATTACAAGGGCCGGC+CGG 0.538203 5_2:-7835137 Msa0754290:CDS
TGGTCTTAGGTGTTTCACAT+AGG 0.541798 5_2:+7833663 None:intergenic
CCTTGTAATCAGATGCATCT+GGG 0.541992 5_2:+7835146 None:intergenic
TGTCCGGTACCCGCAAGTAC+CGG 0.542640 5_2:-7833805 Msa0754290:CDS
GGCGGCCGCGGACCAACCAC+CGG 0.543833 5_2:+7835099 None:intergenic
ATCACGGCCCTCGGCACCGG+TGG 0.545009 5_2:-7834049 Msa0754290:CDS
TGCCTCTACATTTCATGCAT+AGG 0.545650 5_2:-7830645 Msa0754290:exon
ATTATGGTTGTGGCCCATAT+GGG 0.546937 5_2:+7831376 None:intergenic
CGTAACCCCAACCTCTACCT+TGG 0.549093 5_2:+7833870 None:intergenic
TGGCAGTGCAATCACAATCA+AGG 0.551937 5_2:-7831461 Msa0754290:CDS
TTAGACAAAGCGGCAATCAA+AGG 0.554882 5_2:-7831493 Msa0754290:CDS
GATATTAGGAGGAGAAGTGA+TGG 0.558978 5_2:-7835074 Msa0754290:CDS
TATGAGTGCTGCCGCAACCA+TGG 0.562291 5_2:+7831108 None:intergenic
CACCTAAGACCAAGAAGCAA+AGG 0.564356 5_2:-7833652 Msa0754290:CDS
ACAACCATGGATTGTCACAT+TGG 0.565357 5_2:-7831304 Msa0754290:CDS
AAGCATAGGGTCTTTGGCAG+CGG 0.567922 5_2:-7833921 Msa0754290:CDS
GATCCGGTACTTGCGGGTAC+CGG 0.569345 5_2:+7833802 None:intergenic
ATGCATCTGATTACAAGGGC+CGG 0.569787 5_2:-7835141 Msa0754290:CDS
TGTTCCAATGTGACAATCCA+TGG 0.571949 5_2:+7831300 None:intergenic
ACGACCGCAATCTGAGTCAA+AGG 0.573004 5_2:+7833761 None:intergenic
TCCAAATAAACCATGGATTG+CGG 0.574971 5_2:-7830819 Msa0754290:CDS
GGACAAGAGACTTGCTGAGG+CGG 0.576506 5_2:-7830690 Msa0754290:CDS
TCAAGATTATCCGCAATCCA+TGG 0.577407 5_2:+7830809 None:intergenic
CACAACCGGTGGTTGGTCCG+CGG 0.578072 5_2:-7835104 Msa0754290:CDS
TAAGAAATTAGTAACAACAT+TGG 0.578419 5_2:+7834970 None:intergenic
GCAATCAAAGGCATAGAAAG+TGG 0.579246 5_2:-7831481 Msa0754290:CDS
TATCTCTACCTTAACAGATG+TGG 0.585721 5_2:-7831428 Msa0754290:CDS
ATTAGTAACAACATTGGCAG+AGG 0.586147 5_2:+7834976 None:intergenic
TTGCGACTGGTCGAATGAAG+CGG 0.586629 5_2:+7831206 None:intergenic
AGCACCCTCCCTACAACACA+AGG 0.588695 5_2:-7835178 Msa0754290:CDS
TAGTCCTTTGACTCAGATTG+CGG 0.589065 5_2:-7833765 Msa0754290:CDS
AGACCGTCATTGATGCTGCT+GGG 0.589637 5_2:+7831269 None:intergenic
TGCTAAGTGGTATGTGTACA+AGG 0.589791 5_2:-7830711 Msa0754290:CDS
ACAGGTCCACAACCGGTGGT+TGG 0.591605 5_2:-7835111 Msa0754290:CDS
AAAAGACAAAGACTCAACTA+GGG 0.596229 5_2:+7830567 None:intergenic
CCCCTATGCATGAAATGTAG+AGG 0.599100 5_2:+7830643 None:intergenic
CCTCTACATTTCATGCATAG+GGG 0.599838 5_2:-7830643 Msa0754290:exon
AGAATGTTGTCATTTGAGCA+TGG 0.600950 5_2:+7831341 None:intergenic
ATTGCCCAAATGCATAGTAC+CGG 0.603355 5_2:+7835003 None:intergenic
ATACAAGATAACCAAGGTAG+AGG 0.606582 5_2:-7833881 Msa0754290:CDS
TATATTTGGCTTGTGCTAAG+TGG 0.609309 5_2:-7830724 Msa0754290:CDS
GGGATGACATGAAGGGCTTG+TGG 0.613318 5_2:+7835258 None:intergenic
ATGGAGAGATTGACAACACT+CGG 0.615658 5_2:-7835055 Msa0754290:CDS
GTATTTAGCACTTTACATCA+CGG 0.617039 5_2:-7834065 Msa0754290:CDS
GTGAGTTGGGATGACATGAA+GGG 0.620522 5_2:+7835251 None:intergenic
TTGCGGATAATCTTGATCAA+GGG 0.620665 5_2:-7830802 Msa0754290:CDS
GACTCTAGTGAACAATGTGA+CGG 0.622141 5_2:-7830843 Msa0754290:CDS
ACTCTAGTGAACAATGTGAC+GGG 0.623386 5_2:-7830842 Msa0754290:CDS
TCTGATGACCAAGAAAAGAA+GGG 0.624905 5_2:-7833980 Msa0754290:CDS
CGGATAATCTTGATCAAGGG+AGG 0.625811 5_2:-7830799 Msa0754290:CDS
ATAGAGCAATGAAGAATCAG+AGG 0.625823 5_2:+7833700 None:intergenic
ACCACCGGTTGTGGACCTGT+CGG 0.626051 5_2:+7835114 None:intergenic
GCCGACAGGTCCACAACCGG+TGG 0.637663 5_2:-7835115 Msa0754290:CDS
GAATGAAAACTATGAGTACA+GGG 0.638544 5_2:-7830916 Msa0754290:CDS
CTCATATTGCAAGATATGAG+AGG 0.641438 5_2:+7835199 None:intergenic
CAGCACTCATAGAAATGAAG+CGG 0.643538 5_2:-7831096 Msa0754290:CDS
GACAGCTGCAAAGATGGCAA+TGG 0.645630 5_2:+7834490 None:intergenic
TAGAGCAATGAAGAATCAGA+GGG 0.646481 5_2:+7833701 None:intergenic
AATCCCAGCAGCATCAATGA+CGG 0.648376 5_2:-7831272 Msa0754290:CDS
TGACGGGTCCAAATAAACCA+TGG 0.653922 5_2:-7830826 Msa0754290:CDS
GCGGCCGCCATGATATTAGG+AGG 0.655145 5_2:-7835085 Msa0754290:CDS
TATGCTAAGTGCTATAAATG+TGG 0.657537 5_2:-7830750 Msa0754290:CDS
AAACAGTTTCTTAGACAAAG+CGG 0.657671 5_2:-7831503 Msa0754290:intron
AGTATCACAAGCAACAACCA+TGG 0.663164 5_2:-7831317 Msa0754290:CDS
TTGGGGTTACGGTATTTGTG+CGG 0.666939 5_2:-7833858 Msa0754290:CDS
CAATAGACAGAGCATAAAGG+AGG 0.685001 5_2:+7834943 None:intergenic
AAATTACTAAACAACTCACA+CGG 0.686574 5_2:-7831181 Msa0754290:CDS
TTCTCCTCCTAATATCATGG+CGG 0.687568 5_2:+7835081 None:intergenic
GGGTACCGGACAAGAAAACA+AGG 0.694489 5_2:+7833816 None:intergenic
CCAGATGCATCTGATTACAA+GGG 0.704068 5_2:-7835145 Msa0754290:CDS
CAAGGACAAGAGACTTGCTG+AGG 0.709240 5_2:-7830693 Msa0754290:CDS
CAACCATGGACACTACTGAG+AGG 0.733442 5_2:+7831122 None:intergenic
TATGTGAAATGTGAAGCTAG+GGG 0.736577 5_2:+7835222 None:intergenic
GCACCCTCCCTACAACACAA+GGG 0.747611 5_2:-7835177 Msa0754290:CDS
GTGTACATACAAGATAACCA+AGG 0.754045 5_2:-7833887 Msa0754290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATTGTATAAATAAA+GGG + chr5_2:7832165-7832184 None:intergenic 10.0%
!! TAAGAAAATTGTATAAATAA+AGG + chr5_2:7832166-7832185 None:intergenic 10.0%
!! TCATTCATTTATTTATTTAT+TGG - chr5_2:7832461-7832480 Msa0754290:intron 10.0%
!! TTTATATAATAGTATAGTAT+TGG - chr5_2:7833196-7833215 Msa0754290:intron 10.0%
!!! ATTAAAAAAATTTGCAATTT+TGG - chr5_2:7833273-7833292 Msa0754290:intron 10.0%
!!! TTTTGCAATTTTTTTTAATA+GGG - chr5_2:7833447-7833466 Msa0754290:intron 10.0%
!!! TTTTAAAAAGAAAATACAAA+TGG + chr5_2:7835080-7835099 None:intergenic 10.0%
!! AAAAAATTCCTTTCTTATTA+TGG - chr5_2:7830911-7830930 Msa0754290:CDS 15.0%
!! ACAAATGTATGTTTATATTA+GGG - chr5_2:7831369-7831388 Msa0754290:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr5_2:7832100-7832119 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr5_2:7832101-7832120 None:intergenic 15.0%
!!! TTTTATTTGAAAACAAAAGT+TGG - chr5_2:7832638-7832657 Msa0754290:intron 15.0%
!!! TAAACCTTTATAATTTGTTT+GGG + chr5_2:7832821-7832840 None:intergenic 15.0%
!! ATAAAGACATTTATCATTAT+TGG - chr5_2:7832983-7833002 Msa0754290:intron 15.0%
!! TAAAGACATTTATCATTATT+GGG - chr5_2:7832984-7833003 Msa0754290:intron 15.0%
!!! CTTTTGCAATTTTTTTTAAT+AGG - chr5_2:7833446-7833465 Msa0754290:intron 15.0%
!!! TTTGCAATTTTTTTTAATAG+GGG - chr5_2:7833448-7833467 Msa0754290:intron 15.0%
!! ATTCTACTTAATTTACTTTA+AGG + chr5_2:7833752-7833771 None:intergenic 15.0%
!!! AGCTTTATTAATTTGTAATT+CGG + chr5_2:7833880-7833899 None:intergenic 15.0%
!! AATTAATTCATTAATCTTCA+AGG + chr5_2:7834026-7834045 None:intergenic 15.0%
!! TTTATTTGAAAAAGGTTTAA+TGG + chr5_2:7835177-7835196 None:intergenic 15.0%
!! TAAGAAATTAGTAACAACAT+TGG + chr5_2:7830598-7830617 None:intergenic 20.0%
!! AATGTTGTTACTAATTTCTT+AGG - chr5_2:7830597-7830616 Msa0754290:three_prime_UTR 20.0%
!!! AGAATTTTTCAAGAAATAGT+TGG - chr5_2:7830739-7830758 Msa0754290:CDS 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG - chr5_2:7830753-7830772 Msa0754290:CDS 20.0%
!!! TTAGTTTTCCATAATAAGAA+AGG + chr5_2:7830922-7830941 None:intergenic 20.0%
!! AAAACCAATCATAATTAATG+TGG + chr5_2:7830985-7831004 None:intergenic 20.0%
!! AAAATAGTACTAGAAAACAA+TGG + chr5_2:7831143-7831162 None:intergenic 20.0%
!!! TTTTTGAGGATTTAATTCAA+AGG + chr5_2:7831315-7831334 None:intergenic 20.0%
!! AATATCAAAGAACTAAACAA+CGG + chr5_2:7831348-7831367 None:intergenic 20.0%
!! GACAAATGTATGTTTATATT+AGG - chr5_2:7831368-7831387 Msa0754290:CDS 20.0%
!! AGAATGAATAGAAAATTTAC+CGG + chr5_2:7831959-7831978 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr5_2:7832031-7832050 None:intergenic 20.0%
!!! AGACACTTTTTTTTAGAAAA+TGG + chr5_2:7832032-7832051 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr5_2:7832068-7832087 None:intergenic 20.0%
!! AAAAGTGGAATATATTGTAT+CGG + chr5_2:7832142-7832161 None:intergenic 20.0%
!!! TTATAATTTGTTTGGGAATT+CGG + chr5_2:7832814-7832833 None:intergenic 20.0%
!! AATTCCCAAACAAATTATAA+AGG - chr5_2:7832814-7832833 Msa0754290:intron 20.0%
!!! CTAAACCTTTATAATTTGTT+TGG + chr5_2:7832822-7832841 None:intergenic 20.0%
!! ATGTAGAAAGAACAAATTAT+TGG - chr5_2:7833016-7833035 Msa0754290:intron 20.0%
!! TGTAGAAAGAACAAATTATT+GGG - chr5_2:7833017-7833036 Msa0754290:intron 20.0%
!!! TTGCAATTTTTTTTAATAGG+GGG - chr5_2:7833449-7833468 Msa0754290:intron 20.0%
!! AAGTTTCAAAAATCTAACTA+AGG - chr5_2:7833645-7833664 Msa0754290:CDS 20.0%
!! CATTAACTAAAAACAAAGAA+AGG + chr5_2:7833686-7833705 None:intergenic 20.0%
!! AATTAAGTAGAATGATTGAA+AGG - chr5_2:7833759-7833778 Msa0754290:CDS 20.0%
!! ATTAAGTAGAATGATTGAAA+GGG - chr5_2:7833760-7833779 Msa0754290:CDS 20.0%
!!! TTTATTAATTTGTAATTCGG+TGG + chr5_2:7833877-7833896 None:intergenic 20.0%
!! AAGAAGTTAAAATGGTAATA+AGG - chr5_2:7834160-7834179 Msa0754290:CDS 20.0%
!! TATAAATGTGGTGATATATT+TGG - chr5_2:7834827-7834846 Msa0754290:intron 20.0%
!! ATATTTCAACAAACATTATG+TGG - chr5_2:7835099-7835118 Msa0754290:CDS 20.0%
!!! ATACTTTCTTTTGTTACATT+TGG + chr5_2:7835256-7835275 None:intergenic 20.0%
! TGATCCACATTAATTATGAT+TGG - chr5_2:7830978-7830997 Msa0754290:CDS 25.0%
! ATATCTGTCAAACAAAGAAT+GGG + chr5_2:7831051-7831070 None:intergenic 25.0%
!! ACGGTATGATTAAATTTTTG+AGG + chr5_2:7831329-7831348 None:intergenic 25.0%
!!! GTATGATTAAATTTTTCAGC+TGG - chr5_2:7831607-7831626 Msa0754290:intron 25.0%
!!! TTCTATTTTTTCGTAAGCAT+AGG - chr5_2:7831630-7831649 Msa0754290:intron 25.0%
!!! TCTATTTTTTCGTAAGCATA+GGG - chr5_2:7831631-7831650 Msa0754290:intron 25.0%
! AAAGTGGAATATATTGTATC+GGG + chr5_2:7832141-7832160 None:intergenic 25.0%
! TGTATAAATAAAGGGAAAAG+TGG + chr5_2:7832157-7832176 None:intergenic 25.0%
! ATTAAGCTACTTAAACTAAG+AGG + chr5_2:7832331-7832350 None:intergenic 25.0%
!! TGACATAGTTGATATATTTG+TGG - chr5_2:7832566-7832585 Msa0754290:intron 25.0%
! TGACTCAAAATTGAATAGTT+TGG - chr5_2:7832593-7832612 Msa0754290:intron 25.0%
!!! TATAATTTGTTTGGGAATTC+GGG + chr5_2:7832813-7832832 None:intergenic 25.0%
! TCTTTATTGTTAGTTGCATA+CGG + chr5_2:7832970-7832989 None:intergenic 25.0%
! ATAAACCACACATTATTAGT+TGG + chr5_2:7833154-7833173 None:intergenic 25.0%
! TTCTCTCAAAAAATAATGTG+TGG - chr5_2:7833173-7833192 Msa0754290:intron 25.0%
!!! GCAACATTTTAAAACTTAGA+GGG + chr5_2:7833239-7833258 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - chr5_2:7833244-7833263 Msa0754290:intron 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr5_2:7833351-7833370 None:intergenic 25.0%
! AGAACATATTTCTCTAAACA+TGG - chr5_2:7833416-7833435 Msa0754290:intron 25.0%
! GAACATATTTCTCTAAACAT+GGG - chr5_2:7833417-7833436 Msa0754290:intron 25.0%
! AACATATTTCTCTAAACATG+GGG - chr5_2:7833418-7833437 Msa0754290:intron 25.0%
!! GTTTCAAAATGTTGCAATTT+TGG + chr5_2:7833475-7833494 None:intergenic 25.0%
!!! ATTGCAACATTTTGAAACTT+AGG - chr5_2:7833477-7833496 Msa0754290:intron 25.0%
!!! TTGCAACATTTTGAAACTTA+GGG - chr5_2:7833478-7833497 Msa0754290:intron 25.0%
! GTAAAAGCAATAATTTCGAA+AGG + chr5_2:7833600-7833619 None:intergenic 25.0%
!!! TTTAGTAATTTTTTTGCGAC+TGG + chr5_2:7834375-7834394 None:intergenic 25.0%
! AAATTACTAAACAACTCACA+CGG - chr5_2:7834384-7834403 Msa0754290:intron 25.0%
! TAATTGTCCCATATACATAA+AGG + chr5_2:7834601-7834620 None:intergenic 25.0%
!!! CTATGATTTTTATTGGCTAT+TGG - chr5_2:7834791-7834810 Msa0754290:intron 25.0%
!! AACAGAAGAAAAAAGTTGAT+TGG + chr5_2:7834955-7834974 None:intergenic 25.0%
!! GTCTTTTTATAAAGAGTGAT+TGG - chr5_2:7835014-7835033 Msa0754290:CDS 25.0%
!! GTTTAATGGATATCTATTGA+TGG + chr5_2:7835163-7835182 None:intergenic 25.0%
! TGAAGCTGTTTATTTGAAAA+AGG + chr5_2:7835185-7835204 None:intergenic 25.0%
CAAGTATGTGACCAAATTAA+CGG + chr5_2:7830541-7830560 None:intergenic 30.0%
! TTTCTTGCTGATACTTTTCT+AGG - chr5_2:7830651-7830670 Msa0754290:CDS 30.0%
GATATCTGTCAAACAAAGAA+TGG + chr5_2:7831052-7831071 None:intergenic 30.0%
GAGATTATCTTACAATTGCT+TGG + chr5_2:7831100-7831119 None:intergenic 30.0%
! TTAGAGTCTTCTTTGCATTT+TGG + chr5_2:7831441-7831460 None:intergenic 30.0%
GTATTTAGCACTTTACATCA+CGG - chr5_2:7831500-7831519 Msa0754290:CDS 30.0%
! TAATCATACCCTTCTTTTCT+TGG + chr5_2:7831596-7831615 None:intergenic 30.0%
TCTGTGTGAAAAACTAAAGT+AGG - chr5_2:7832187-7832206 Msa0754290:intron 30.0%
CTAAAGTAGGTCAATTATAC+CGG - chr5_2:7832200-7832219 Msa0754290:intron 30.0%
TAAAGTAGGTCAATTATACC+GGG - chr5_2:7832201-7832220 Msa0754290:intron 30.0%
TTGCTATGTTTATGTCTTGT+TGG - chr5_2:7832301-7832320 Msa0754290:intron 30.0%
AAAGTTTCTCTTCCAATGAA+TGG - chr5_2:7832353-7832372 Msa0754290:intron 30.0%
ACTCAAATTGTTCCATTCAT+TGG + chr5_2:7832368-7832387 None:intergenic 30.0%
GTATAGACAATCTTCTCTAT+TGG + chr5_2:7832537-7832556 None:intergenic 30.0%
AAAGAAAAGAGAGGAGAAAA+TGG + chr5_2:7832787-7832806 None:intergenic 30.0%
GGAATATACTGTATATGTCA+AGG - chr5_2:7832875-7832894 Msa0754290:intron 30.0%
ATATACTGTATATGTCAAGG+AGG - chr5_2:7832878-7832897 Msa0754290:intron 30.0%
TATACTGTATATGTCAAGGA+GGG - chr5_2:7832879-7832898 Msa0754290:intron 30.0%
TTTGTTCTTTCTACATCAAG+TGG + chr5_2:7833012-7833031 None:intergenic 30.0%
AAATGACAACTGGGTTATTA+AGG - chr5_2:7833066-7833085 Msa0754290:intron 30.0%
AGAAACCAACTAATAATGTG+TGG - chr5_2:7833146-7833165 Msa0754290:intron 30.0%
!!! CGCAACATTTTAAAACTTAG+AGG + chr5_2:7833240-7833259 None:intergenic 30.0%
! CAACTTTTTGTAAAGATGTG+AGG - chr5_2:7833357-7833376 Msa0754290:intron 30.0%
! CATAAGGGAAATATGCTTTT+TGG + chr5_2:7833383-7833402 None:intergenic 30.0%
CATATTTCCCTTATGTTAGA+GGG - chr5_2:7833388-7833407 Msa0754290:intron 30.0%
ACATATTTCTCTAAACATGG+GGG - chr5_2:7833419-7833438 Msa0754290:intron 30.0%
!!! TGCAACATTTTGAAACTTAG+GGG - chr5_2:7833479-7833498 Msa0754290:intron 30.0%
CGATACGCAAAAAATACTAT+AGG + chr5_2:7833522-7833541 None:intergenic 30.0%
GATATCTTGCAAATCTCAAA+AGG + chr5_2:7833563-7833582 None:intergenic 30.0%
!!! AGGTAATTTTGATTGATGAG+AGG + chr5_2:7833732-7833751 None:intergenic 30.0%
TTGAAAGGGTCAATAAACTT+CGG - chr5_2:7833774-7833793 Msa0754290:CDS 30.0%
TCTTCAAGGTAATAACAAAG+AGG + chr5_2:7834012-7834031 None:intergenic 30.0%
AAACAGTTTCTTAGACAAAG+CGG - chr5_2:7834062-7834081 Msa0754290:CDS 30.0%
AGATGTGGAAGAAGTTAAAA+TGG - chr5_2:7834152-7834171 Msa0754290:CDS 30.0%
TAATAAGGATGTTACCCATA+TGG - chr5_2:7834175-7834194 Msa0754290:CDS 30.0%
AATAAGGATGTTACCCATAT+GGG - chr5_2:7834176-7834195 Msa0754290:CDS 30.0%
! ATGGATTGTCCAAAACATTA+TGG + chr5_2:7834208-7834227 None:intergenic 30.0%
! TGCCACAATTTTTCTTTGTT+GGG - chr5_2:7834565-7834584 Msa0754290:intron 30.0%
! TTTCTAAGAGAATGTCCTAA+AGG - chr5_2:7834627-7834646 Msa0754290:intron 30.0%
! CTCATAGTTTTCATTCCTTT+AGG + chr5_2:7834645-7834664 None:intergenic 30.0%
GAATGAAAACTATGAGTACA+GGG - chr5_2:7834649-7834668 Msa0754290:intron 30.0%
TATGCTAAGTGCTATAAATG+TGG - chr5_2:7834815-7834834 Msa0754290:intron 30.0%
AAAAGACAAAGACTCAACTA+GGG + chr5_2:7835001-7835020 None:intergenic 30.0%
AAAAAGACAAAGACTCAACT+AGG + chr5_2:7835002-7835021 None:intergenic 30.0%
! CTTTCTTTTGTTACATTTGG+AGG + chr5_2:7835253-7835272 None:intergenic 30.0%
TATGTGAAATGTGAAGCTAG+GGG + chr5_2:7830346-7830365 None:intergenic 35.0%
GTATGTGAAATGTGAAGCTA+GGG + chr5_2:7830347-7830366 None:intergenic 35.0%
CTCATATTGCAAGATATGAG+AGG + chr5_2:7830369-7830388 None:intergenic 35.0%
AATTTGGTCACATACTTGAC+CGG - chr5_2:7830543-7830562 Msa0754290:three_prime_UTR 35.0%
ATTAGTAACAACATTGGCAG+AGG + chr5_2:7830592-7830611 None:intergenic 35.0%
TCCTTTATGCTCTGTCTATT+GGG - chr5_2:7830624-7830643 Msa0754290:three_prime_UTR 35.0%
!! TTGCTGATACTTTTCTAGGA+AGG - chr5_2:7830655-7830674 Msa0754290:CDS 35.0%
TGTGGCTGAAATATAAGAAG+TGG + chr5_2:7830792-7830811 None:intergenic 35.0%
ATTAACTCTCAGAAATCACG+AGG + chr5_2:7831012-7831031 None:intergenic 35.0%
TTCTGATGACCAAGAAAAGA+AGG - chr5_2:7831584-7831603 Msa0754290:intron 35.0%
TCTGATGACCAAGAAAAGAA+GGG - chr5_2:7831585-7831604 Msa0754290:intron 35.0%
GTGTACATACAAGATAACCA+AGG - chr5_2:7831678-7831697 Msa0754290:intron 35.0%
ATACAAGATAACCAAGGTAG+AGG - chr5_2:7831684-7831703 Msa0754290:intron 35.0%
TAGAGCAATGAAGAATCAGA+GGG + chr5_2:7831867-7831886 None:intergenic 35.0%
ATAGAGCAATGAAGAATCAG+AGG + chr5_2:7831868-7831887 None:intergenic 35.0%
TTCTTCATTGCTCTATGAAG+AGG - chr5_2:7831872-7831891 Msa0754290:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr5_2:7832018-7832037 None:intergenic 35.0%
TGGTTTCCAATCATGAAGAT+CGG + chr5_2:7832517-7832536 None:intergenic 35.0%
AAGGTAAGAGAAGGAAAAAG+TGG + chr5_2:7832754-7832773 None:intergenic 35.0%
AAAGAGAGGAGAAAATGGAA+GGG + chr5_2:7832782-7832801 None:intergenic 35.0%
AAAAGAGAGGAGAAAATGGA+AGG + chr5_2:7832783-7832802 None:intergenic 35.0%
ATACTGTATATGTCAAGGAG+GGG - chr5_2:7832880-7832899 Msa0754290:intron 35.0%
! GGTGCCACATATTTAATAGT+GGG - chr5_2:7833038-7833057 Msa0754290:intron 35.0%
ATGGCCCACTATTAAATATG+TGG + chr5_2:7833045-7833064 None:intergenic 35.0%
! ATAACCCAGTTGTCATTTCA+TGG + chr5_2:7833064-7833083 None:intergenic 35.0%
GATCATTTGCTCCTTAATCA+TGG - chr5_2:7833088-7833107 Msa0754290:intron 35.0%
!!! TCAACAATTTTGGGACGAAA+GGG + chr5_2:7833300-7833319 None:intergenic 35.0%
GCATATTTCCCTTATGTTAG+AGG - chr5_2:7833387-7833406 Msa0754290:intron 35.0%
! CTTTTGACCCTCTAACATAA+GGG + chr5_2:7833398-7833417 None:intergenic 35.0%
! TCTTTTGACCCTCTAACATA+AGG + chr5_2:7833399-7833418 None:intergenic 35.0%
CATATTTCTCTAAACATGGG+GGG - chr5_2:7833420-7833439 Msa0754290:intron 35.0%
!!! GTATTTTTTGCGTATCGCTT+TGG - chr5_2:7833525-7833544 Msa0754290:intron 35.0%
! GTCAAAAAAGAAGTATGCCT+TGG - chr5_2:7833705-7833724 Msa0754290:CDS 35.0%
ATATGCATATTGCTCCTCTT+TGG - chr5_2:7833963-7833982 Msa0754290:CDS 35.0%
CATATTAAGCAACACCAAAG+AGG + chr5_2:7833980-7833999 None:intergenic 35.0%
CAATCACAATCAAGGAGAAA+TGG - chr5_2:7834112-7834131 Msa0754290:CDS 35.0%
TATCTCTACCTTAACAGATG+TGG - chr5_2:7834137-7834156 Msa0754290:CDS 35.0%
AACTTCTTCCACATCTGTTA+AGG + chr5_2:7834148-7834167 None:intergenic 35.0%
TGTCCAAAACATTATGGTTG+TGG + chr5_2:7834202-7834221 None:intergenic 35.0%
! AGAATGTTGTCATTTGAGCA+TGG + chr5_2:7834227-7834246 None:intergenic 35.0%
TCAATGACGGTCTTCTTAAT+CGG - chr5_2:7834306-7834325 Msa0754290:intron 35.0%
TTAAAATTCGCACGATCACA+TGG - chr5_2:7834492-7834511 Msa0754290:CDS 35.0%
!!! TGGTTTTGTAAACGATCCAA+CGG - chr5_2:7834512-7834531 Msa0754290:intron 35.0%
! GTGCCACAATTTTTCTTTGT+TGG - chr5_2:7834564-7834583 Msa0754290:intron 35.0%
GACCCAACAAAGAAAAATTG+TGG + chr5_2:7834570-7834589 None:intergenic 35.0%
! CAATTTTTCTTTGTTGGGTC+TGG - chr5_2:7834570-7834589 Msa0754290:intron 35.0%
GGAATGAAAACTATGAGTAC+AGG - chr5_2:7834648-7834667 Msa0754290:intron 35.0%
! TCCAAATAAACCATGGATTG+CGG - chr5_2:7834746-7834765 Msa0754290:intron 35.0%
ATTGCGGATAATCTTGATCA+AGG - chr5_2:7834762-7834781 Msa0754290:intron 35.0%
TTGCGGATAATCTTGATCAA+GGG - chr5_2:7834763-7834782 Msa0754290:intron 35.0%
! GGAGGCTCTATGATTTTTAT+TGG - chr5_2:7834784-7834803 Msa0754290:intron 35.0%
!! TATATTTGGCTTGTGCTAAG+TGG - chr5_2:7834841-7834860 Msa0754290:intron 35.0%
CTAGGGGAATTAAGTGAGTT+GGG + chr5_2:7830330-7830349 None:intergenic 40.0%
GGTATGTGAAATGTGAAGCT+AGG + chr5_2:7830348-7830367 None:intergenic 40.0%
! CAGTTTTCCCTTGTGTTGTA+GGG + chr5_2:7830398-7830417 None:intergenic 40.0%
! ACAGTTTTCCCTTGTGTTGT+AGG + chr5_2:7830399-7830418 None:intergenic 40.0%
CCTTGTAATCAGATGCATCT+GGG + chr5_2:7830422-7830441 None:intergenic 40.0%
CCAGATGCATCTGATTACAA+GGG - chr5_2:7830420-7830439 Msa0754290:three_prime_UTR 40.0%
TTCTCCTCCTAATATCATGG+CGG + chr5_2:7830487-7830506 None:intergenic 40.0%
CACTTCTCCTCCTAATATCA+TGG + chr5_2:7830490-7830509 None:intergenic 40.0%
GATATTAGGAGGAGAAGTGA+TGG - chr5_2:7830491-7830510 Msa0754290:three_prime_UTR 40.0%
ATGGAGAGATTGACAACACT+CGG - chr5_2:7830510-7830529 Msa0754290:three_prime_UTR 40.0%
TTGACCGGTACTATGCATTT+GGG - chr5_2:7830558-7830577 Msa0754290:three_prime_UTR 40.0%
ATTGCCCAAATGCATAGTAC+CGG + chr5_2:7830565-7830584 None:intergenic 40.0%
CAATAGACAGAGCATAAAGG+AGG + chr5_2:7830625-7830644 None:intergenic 40.0%
CTCCTTTATGCTCTGTCTAT+TGG - chr5_2:7830623-7830642 Msa0754290:three_prime_UTR 40.0%
ACCCAATAGACAGAGCATAA+AGG + chr5_2:7830628-7830647 None:intergenic 40.0%
TTTATGCTCTGTCTATTGGG+TGG - chr5_2:7830627-7830646 Msa0754290:exon 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr5_2:7830815-7830834 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr5_2:7830818-7830837 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr5_2:7830826-7830845 Msa0754290:CDS 40.0%
!! CTTTGCATTTTGGTGGATGT+AGG + chr5_2:7831431-7831450 None:intergenic 40.0%
! GAGTCTTCTTTGCATTTTGG+TGG + chr5_2:7831438-7831457 None:intergenic 40.0%
! GACACTAGATTTTAGACCAC+CGG + chr5_2:7831535-7831554 None:intergenic 40.0%
! GGTCTAAAATCTAGTGTCTC+TGG - chr5_2:7831537-7831556 Msa0754290:intron 40.0%
! AAATCTAGTGTCTCTGGCTT+TGG - chr5_2:7831543-7831562 Msa0754290:intron 40.0%
TTTCGTAAGCATAGGGTCTT+TGG - chr5_2:7831638-7831657 Msa0754290:intron 40.0%
AAGATAACCAAGGTAGAGGT+TGG - chr5_2:7831688-7831707 Msa0754290:intron 40.0%
AGATAACCAAGGTAGAGGTT+GGG - chr5_2:7831689-7831708 Msa0754290:intron 40.0%
TACCAACAAGTTGCTTGATC+CGG + chr5_2:7831782-7831801 None:intergenic 40.0%
TAGTCCTTTGACTCAGATTG+CGG - chr5_2:7831800-7831819 Msa0754290:intron 40.0%
! TGGTCTTAGGTGTTTCACAT+AGG + chr5_2:7831905-7831924 None:intergenic 40.0%
! ATCCTTTGCTTCTTGGTCTT+AGG + chr5_2:7831918-7831937 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr5_2:7832017-7832036 None:intergenic 40.0%
TAATAATACTACCTCCGTCC+CGG + chr5_2:7832222-7832241 None:intergenic 40.0%
TCAATCCCGATCTTCATGAT+TGG - chr5_2:7832508-7832527 Msa0754290:intron 40.0%
GGTTTCCAATCATGAAGATC+GGG + chr5_2:7832516-7832535 None:intergenic 40.0%
TTCGGGAGTAAAGAAAAGAG+AGG + chr5_2:7832796-7832815 None:intergenic 40.0%
GTCAACACAAAGTGATAGAG+TGG - chr5_2:7832854-7832873 Msa0754290:intron 40.0%
AATGAAACTCCCATGCATCT+TGG + chr5_2:7832927-7832946 None:intergenic 40.0%
! GGGTGCCACATATTTAATAG+TGG - chr5_2:7833037-7833056 Msa0754290:intron 40.0%
TGGACTTGTCACCATGATTA+AGG + chr5_2:7833102-7833121 None:intergenic 40.0%
TTAACTATTAAGCTCGTGCG+TGG + chr5_2:7833122-7833141 None:intergenic 40.0%
!!! CAACAATTTTGGGACGAAAG+GGG + chr5_2:7833299-7833318 None:intergenic 40.0%
!!! CTCAACAATTTTGGGACGAA+AGG + chr5_2:7833301-7833320 None:intergenic 40.0%
! GGCGTCTTCTCAACAATTTT+GGG + chr5_2:7833309-7833328 None:intergenic 40.0%
! TGGCGTCTTCTCAACAATTT+TGG + chr5_2:7833310-7833329 None:intergenic 40.0%
!!! GCGATTATGGTCCCTTTTTT+GGG + chr5_2:7833338-7833357 None:intergenic 40.0%
!!! TGCGATTATGGTCCCTTTTT+TGG + chr5_2:7833339-7833358 None:intergenic 40.0%
TCGAAAGGAGATAGACTAGA+TGG + chr5_2:7833585-7833604 None:intergenic 40.0%
TTTGATTGATGAGAGGTCCA+AGG + chr5_2:7833725-7833744 None:intergenic 40.0%
TTAGACAAAGCGGCAATCAA+AGG - chr5_2:7834072-7834091 Msa0754290:CDS 40.0%
! GCAATCAAAGGCATAGAAAG+TGG - chr5_2:7834084-7834103 Msa0754290:CDS 40.0%
ATTATGGTTGTGGCCCATAT+GGG + chr5_2:7834192-7834211 None:intergenic 40.0%
AGTATCACAAGCAACAACCA+TGG - chr5_2:7834248-7834267 Msa0754290:intron 40.0%
! ACAACCATGGATTGTCACAT+TGG - chr5_2:7834261-7834280 Msa0754290:intron 40.0%
TGTTCCAATGTGACAATCCA+TGG + chr5_2:7834268-7834287 None:intergenic 40.0%
TTCACTCCTTTACAACGCAT+TGG - chr5_2:7834408-7834427 Msa0754290:intron 40.0%
CAGCACTCATAGAAATGAAG+CGG - chr5_2:7834469-7834488 Msa0754290:intron 40.0%
! AGATGCCATTGAGTGTGTTT+TGG - chr5_2:7834538-7834557 Msa0754290:intron 40.0%
ACCAACCAAAACACACTCAA+TGG + chr5_2:7834546-7834565 None:intergenic 40.0%
TGGAGAGGCCTTTATGTATA+TGG - chr5_2:7834590-7834609 Msa0754290:intron 40.0%
GGAGAGGCCTTTATGTATAT+GGG - chr5_2:7834591-7834610 Msa0754290:intron 40.0%
TTCTTGAGCACACTCTCAAT+AGG - chr5_2:7834675-7834694 Msa0754290:intron 40.0%
TCTTGAGCACACTCTCAATA+GGG - chr5_2:7834676-7834695 Msa0754290:intron 40.0%
GACTCTAGTGAACAATGTGA+CGG - chr5_2:7834722-7834741 Msa0754290:intron 40.0%
ACTCTAGTGAACAATGTGAC+GGG - chr5_2:7834723-7834742 Msa0754290:intron 40.0%
TCCGCAATCCATGGTTTATT+TGG + chr5_2:7834750-7834769 None:intergenic 40.0%
TCAAGATTATCCGCAATCCA+TGG + chr5_2:7834759-7834778 None:intergenic 40.0%
TGCTAAGTGGTATGTGTACA+AGG - chr5_2:7834854-7834873 Msa0754290:intron 40.0%
TGCCTCTACATTTCATGCAT+AGG - chr5_2:7834920-7834939 Msa0754290:CDS 40.0%
GCCTCTACATTTCATGCATA+GGG - chr5_2:7834921-7834940 Msa0754290:CDS 40.0%
CCTCTACATTTCATGCATAG+GGG - chr5_2:7834922-7834941 Msa0754290:CDS 40.0%
! GTGAGTTGGGATGACATGAA+GGG + chr5_2:7830317-7830336 None:intergenic 45.0%
! AGTGAGTTGGGATGACATGA+AGG + chr5_2:7830318-7830337 None:intergenic 45.0%
GCTAGGGGAATTAAGTGAGT+TGG + chr5_2:7830331-7830350 None:intergenic 45.0%
TTTCCCTTGTGTTGTAGGGA+GGG + chr5_2:7830394-7830413 None:intergenic 45.0%
! TTTTCCCTTGTGTTGTAGGG+AGG + chr5_2:7830395-7830414 None:intergenic 45.0%
CCCAGATGCATCTGATTACA+AGG - chr5_2:7830419-7830438 Msa0754290:three_prime_UTR 45.0%
CCCTTGTAATCAGATGCATC+TGG + chr5_2:7830423-7830442 None:intergenic 45.0%
ATGCATCTGATTACAAGGGC+CGG - chr5_2:7830424-7830443 Msa0754290:three_prime_UTR 45.0%
CTTGACCGGTACTATGCATT+TGG - chr5_2:7830557-7830576 Msa0754290:three_prime_UTR 45.0%
!! CATTTTGGTGGATGTAGGCT+TGG + chr5_2:7831426-7831445 None:intergenic 45.0%
AGCAGACAGCAAGCAACTAT+TGG - chr5_2:7831473-7831492 Msa0754290:CDS 45.0%
GATAACCAAGGTAGAGGTTG+GGG - chr5_2:7831690-7831709 Msa0754290:intron 45.0%
TTGGGGTTACGGTATTTGTG+CGG - chr5_2:7831707-7831726 Msa0754290:intron 45.0%
TATTTGTGCGGTCGCAATTG+TGG - chr5_2:7831719-7831738 Msa0754290:intron 45.0%
TACCGGATCAAGCAACTTGT+TGG - chr5_2:7831777-7831796 Msa0754290:intron 45.0%
CACCTAAGACCAAGAAGCAA+AGG - chr5_2:7831913-7831932 Msa0754290:intron 45.0%
ATGTGGCATCCTTTGCTTCT+TGG + chr5_2:7831925-7831944 None:intergenic 45.0%
TGCCACATAGCAAACAGTTC+CGG - chr5_2:7831937-7831956 Msa0754290:intron 45.0%
!! TACCGGAACTGTTTGCTATG+TGG + chr5_2:7831942-7831961 None:intergenic 45.0%
AATAATTACTCCCTCCGTCC+CGG - chr5_2:7831996-7832015 Msa0754290:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr5_2:7832205-7832224 Msa0754290:intron 45.0%
AGAAAATGGAAGGGATGGGA+AGG + chr5_2:7832773-7832792 None:intergenic 45.0%
GAGGAGAAAATGGAAGGGAT+GGG + chr5_2:7832777-7832796 None:intergenic 45.0%
AGAGGAGAAAATGGAAGGGA+TGG + chr5_2:7832778-7832797 None:intergenic 45.0%
GGCAGGATCAACATCGAATA+GGG + chr5_2:7832906-7832925 None:intergenic 45.0%
TGGCAGGATCAACATCGAAT+AGG + chr5_2:7832907-7832926 None:intergenic 45.0%
TTGATCCTGCCAAGATGCAT+GGG - chr5_2:7832915-7832934 Msa0754290:intron 45.0%
AGTTGCATACGGCTCTCAAT+TGG + chr5_2:7832959-7832978 None:intergenic 45.0%
TGGGCCATGAAATGACAACT+GGG - chr5_2:7833057-7833076 Msa0754290:intron 45.0%
TGGCAGTGCAATCACAATCA+AGG - chr5_2:7834104-7834123 Msa0754290:CDS 45.0%
CATTATGGTTGTGGCCCATA+TGG + chr5_2:7834193-7834212 None:intergenic 45.0%
! GGGCCACAACCATAATGTTT+TGG - chr5_2:7834196-7834215 Msa0754290:intron 45.0%
AATCCCAGCAGCATCAATGA+CGG - chr5_2:7834293-7834312 Msa0754290:intron 45.0%
GGTCGTAGAAAGGAACAGTT+AGG + chr5_2:7834341-7834360 None:intergenic 45.0%
CCAACACCAATGCGTTGTAA+AGG + chr5_2:7834417-7834436 None:intergenic 45.0%
! CCTTTACAACGCATTGGTGT+TGG - chr5_2:7834414-7834433 Msa0754290:intron 45.0%
!!! GCCATTGAGTGTGTTTTGGT+TGG - chr5_2:7834542-7834561 Msa0754290:intron 45.0%
TTTCTTTGTTGGGTCTGGAG+AGG - chr5_2:7834575-7834594 Msa0754290:intron 45.0%
! TGACGGGTCCAAATAAACCA+TGG - chr5_2:7834739-7834758 Msa0754290:intron 45.0%
CGGATAATCTTGATCAAGGG+AGG - chr5_2:7834766-7834785 Msa0754290:intron 45.0%
CCCCTATGCATGAAATGTAG+AGG + chr5_2:7834925-7834944 None:intergenic 45.0%
!! TTTAATATATCTATAAAAAA+AGG - chr5_2:7830685-7830704 Msa0754290:CDS 5.0%
!!! TTTTTAACATAATATAATTT+CGG - chr5_2:7832717-7832736 Msa0754290:intron 5.0%
ACTCGGCATCGCCGTTAATT+TGG - chr5_2:7830527-7830546 Msa0754290:three_prime_UTR 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr5_2:7830805-7830824 Msa0754290:CDS 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr5_2:7830810-7830829 None:intergenic 50.0%
GACAGCTGCAAAGATGGCAA+TGG + chr5_2:7831078-7831097 None:intergenic 50.0%
TGCTTGGACAGCTGCAAAGA+TGG + chr5_2:7831084-7831103 None:intergenic 50.0%
AAGCATAGGGTCTTTGGCAG+CGG - chr5_2:7831644-7831663 Msa0754290:intron 50.0%
CAAGGTAGAGGTTGGGGTTA+CGG - chr5_2:7831696-7831715 Msa0754290:intron 50.0%
!!! GCGCTCCTTGTTTTCTTGTC+CGG - chr5_2:7831744-7831763 Msa0754290:intron 50.0%
!! GGGTACCGGACAAGAAAACA+AGG + chr5_2:7831752-7831771 None:intergenic 50.0%
TTGCTTGATCCGGTACTTGC+GGG + chr5_2:7831772-7831791 None:intergenic 50.0%
GTTGCTTGATCCGGTACTTG+CGG + chr5_2:7831773-7831792 None:intergenic 50.0%
ACGACCGCAATCTGAGTCAA+AGG + chr5_2:7831807-7831826 None:intergenic 50.0%
TCAGATTGCGGTCGTGTTTG+TGG - chr5_2:7831812-7831831 Msa0754290:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr5_2:7832013-7832032 None:intergenic 50.0%
AGGGATGGGAAGGTAAGAGA+AGG + chr5_2:7832763-7832782 None:intergenic 50.0%
GTTGATCCTGCCAAGATGCA+TGG - chr5_2:7832914-7832933 Msa0754290:intron 50.0%
AAACTCCCATGCATCTTGGC+AGG + chr5_2:7832923-7832942 None:intergenic 50.0%
GTGGGCCATGAAATGACAAC+TGG - chr5_2:7833056-7833075 Msa0754290:intron 50.0%
ACGCCACGTGTCCCAAAAAA+GGG - chr5_2:7833324-7833343 Msa0754290:intron 50.0%
AGACCGTCATTGATGCTGCT+GGG + chr5_2:7834299-7834318 None:intergenic 50.0%
AAGACCGTCATTGATGCTGC+TGG + chr5_2:7834300-7834319 None:intergenic 50.0%
CGAATGAAGCGGTCGTAGAA+AGG + chr5_2:7834351-7834370 None:intergenic 50.0%
! TTGCGACTGGTCGAATGAAG+CGG + chr5_2:7834362-7834381 None:intergenic 50.0%
AGTCCTCTCAGTAGTGTCCA+TGG - chr5_2:7834440-7834459 Msa0754290:intron 50.0%
CAACCATGGACACTACTGAG+AGG + chr5_2:7834446-7834465 None:intergenic 50.0%
CTCAGTAGTGTCCATGGTTG+CGG - chr5_2:7834446-7834465 Msa0754290:intron 50.0%
CTCAATGGCATCTTTGCCGT+TGG + chr5_2:7834531-7834550 None:intergenic 50.0%
!! CAAGGACAAGAGACTTGCTG+AGG - chr5_2:7834872-7834891 Msa0754290:intron 50.0%
GGGATGACATGAAGGGCTTG+TGG + chr5_2:7830310-7830329 None:intergenic 55.0%
AGCACCCTCCCTACAACACA+AGG - chr5_2:7830387-7830406 Msa0754290:three_prime_UTR 55.0%
GCACCCTCCCTACAACACAA+GGG - chr5_2:7830388-7830407 Msa0754290:three_prime_UTR 55.0%
ATCTGATTACAAGGGCCGGC+CGG - chr5_2:7830428-7830447 Msa0754290:three_prime_UTR 55.0%
TCCTAATATCATGGCGGCCG+CGG + chr5_2:7830481-7830500 None:intergenic 55.0%
GCACTTTACATCACGGCCCT+CGG - chr5_2:7831507-7831526 Msa0754290:intron 55.0%
!! TTTTAGACCACCGGTGCCGA+GGG + chr5_2:7831526-7831545 None:intergenic 55.0%
!! ATTTTAGACCACCGGTGCCG+AGG + chr5_2:7831527-7831546 None:intergenic 55.0%
CGTAACCCCAACCTCTACCT+TGG + chr5_2:7831698-7831717 None:intergenic 55.0%
TCGTGTTTGTGGCTGCTTGG+AGG - chr5_2:7831823-7831842 Msa0754290:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr5_2:7832009-7832028 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr5_2:7832208-7832227 Msa0754290:intron 55.0%
GACGCCACGTGTCCCAAAAA+AGG - chr5_2:7833323-7833342 Msa0754290:intron 55.0%
!!! GGTCCCTTTTTTGGGACACG+TGG + chr5_2:7833330-7833349 None:intergenic 55.0%
! TATGAGTGCTGCCGCAACCA+TGG + chr5_2:7834460-7834479 None:intergenic 55.0%
!! GGACAAGAGACTTGCTGAGG+CGG - chr5_2:7834875-7834894 Msa0754290:intron 55.0%
!! GACAAGAGACTTGCTGAGGC+GGG - chr5_2:7834876-7834895 Msa0754290:intron 55.0%
TGCTGAGGCGGGCATAGAAT+TGG - chr5_2:7834887-7834906 Msa0754290:intron 55.0%
! ACCACCGGTTGTGGACCTGT+CGG + chr5_2:7830454-7830473 None:intergenic 60.0%
ACAGGTCCACAACCGGTGGT+TGG - chr5_2:7830454-7830473 Msa0754290:three_prime_UTR 60.0%
TCCGCGGCCGCCATGATATT+AGG - chr5_2:7830477-7830496 Msa0754290:three_prime_UTR 60.0%
GCGGCCGCCATGATATTAGG+AGG - chr5_2:7830480-7830499 Msa0754290:three_prime_UTR 60.0%
TGTCCGGTACCCGCAAGTAC+CGG - chr5_2:7831760-7831779 Msa0754290:intron 60.0%
GATCCGGTACTTGCGGGTAC+CGG + chr5_2:7831766-7831785 None:intergenic 60.0%
CGGTCGTGTTTGTGGCTGCT+TGG - chr5_2:7831820-7831839 Msa0754290:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr5_2:7832010-7832029 None:intergenic 60.0%
! CACAACCGGTGGTTGGTCCG+CGG - chr5_2:7830461-7830480 Msa0754290:three_prime_UTR 65.0%
TACATCACGGCCCTCGGCAC+CGG - chr5_2:7831513-7831532 Msa0754290:intron 65.0%
TTGTGGACCTGTCGGCCGGC+CGG + chr5_2:7830446-7830465 None:intergenic 70.0%
CCGGTTGTGGACCTGTCGGC+CGG + chr5_2:7830450-7830469 None:intergenic 70.0%
CCGGCCGACAGGTCCACAAC+CGG - chr5_2:7830447-7830466 Msa0754290:three_prime_UTR 70.0%
GCCGACAGGTCCACAACCGG+TGG - chr5_2:7830450-7830469 Msa0754290:three_prime_UTR 70.0%
! CGCGGACCAACCACCGGTTG+TGG + chr5_2:7830463-7830482 None:intergenic 70.0%
! ATCACGGCCCTCGGCACCGG+TGG - chr5_2:7831516-7831535 Msa0754290:intron 75.0%
! ACAAGGGCCGGCCGGCCGAC+AGG - chr5_2:7830436-7830455 Msa0754290:three_prime_UTR 80.0%
! GGCGGCCGCGGACCAACCAC+CGG + chr5_2:7830469-7830488 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 7830307 7835280 7830307 ID=Msa0754290;Name=Msa0754290
chr5_2 mRNA 7830307 7835280 7830307 ID=Msa0754290-mRNA-1;Parent=Msa0754290;Name=Msa0754290-mRNA-1;_AED=0.02;_eAED=0.02;_QI=77|1|1|1|1|1|4|339|591
chr5_2 exon 7830307 7831519 7830307 ID=Msa0754290-mRNA-1:exon:3555;Parent=Msa0754290-mRNA-1
chr5_2 exon 7833629 7834197 7833629 ID=Msa0754290-mRNA-1:exon:3554;Parent=Msa0754290-mRNA-1
chr5_2 exon 7834481 7834520 7834481 ID=Msa0754290-mRNA-1:exon:3553;Parent=Msa0754290-mRNA-1
chr5_2 exon 7834911 7835280 7834911 ID=Msa0754290-mRNA-1:exon:3552;Parent=Msa0754290-mRNA-1
chr5_2 five_prime_UTR 7835204 7835280 7835204 ID=Msa0754290-mRNA-1:five_prime_utr;Parent=Msa0754290-mRNA-1
chr5_2 CDS 7834911 7835203 7834911 ID=Msa0754290-mRNA-1:cds;Parent=Msa0754290-mRNA-1
chr5_2 CDS 7834481 7834520 7834481 ID=Msa0754290-mRNA-1:cds;Parent=Msa0754290-mRNA-1
chr5_2 CDS 7833629 7834197 7833629 ID=Msa0754290-mRNA-1:cds;Parent=Msa0754290-mRNA-1
chr5_2 CDS 7830646 7831519 7830646 ID=Msa0754290-mRNA-1:cds;Parent=Msa0754290-mRNA-1
chr5_2 three_prime_UTR 7830307 7830645 7830307 ID=Msa0754290-mRNA-1:three_prime_utr;Parent=Msa0754290-mRNA-1
Gene Sequence

>Msa0754290

ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCCAGATGCATCTGATTACAAGGGCCGGCCGGCCGACAGGTCCACAACCGGTGGTTGGTCCGCGGCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGATTGACAACACTCGGCATCGCCGTTAATTTGGTCACATACTTGACCGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAATTTCTTAGGAACCTCCTTTATGCTCTGTCTATTGGGTGGATTTCTTGCTGATACTTTTCTAGGAAGATATCTCACCATTGCCATCTTTGCAGCTGTCCAAGCAATTGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCCTACATCCACCAAAATGCAAAGAAGACTCTAAATCTTGCATACAAGCAGACAGCAAGCAACTATTGGTGATGTATTTAGCACTTTACATCACGGCCCTCGGCACCGGTGGTCTAAAATCTAGTGTCTCTGGCTTTGGTTCTGATCAATTTGATGATTCTGATGACCAAGAAAAGAAGGGTATGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGCATAGGGTCTTTGGCAGCGGTGACTGTTCTTGTGTACATACAAGATAACCAAGGTAGAGGTTGGGGTTACGGTATTTGTGCGGTCGCAATTGTGGTTGCGCTCCTTGTTTTCTTGTCCGGTACCCGCAAGTACCGGATCAAGCAACTTGTTGGTAGTCCTTTGACTCAGATTGCGGTCGTGTTTGTGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCTGATTCTTCATTGCTCTATGAAGAGGATGATATCCTATGTGAAACACCTAAGACCAAGAAGCAAAGGATGCCACATAGCAAACAGTTCCGTTTCTTAGACAAAGCGGCAATCAAAGGCATAGAAAGTGGCAGTGCAATCACAATCAAGGAGAAATGGTATATCTCTACCTTAACAGATGTGGAAGAAGTTAAAATGGTAATAAGGATGTTACCCATATGGGCCACAACCATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACCATGGATTGTCACATTGGAACATTTCAAATCCCAGCAGCATCAATGACGGTCTTCTTAATCGGAACTATTCTCCTAACTGTTCCTTTCTACGACCGCTTCATTCGACCAGTCGCAAAAAAATTACTAAACAACTCACACGGATTCACTCCTTTACAACGCATTGGTGTTGGTTTAGTCCTCTCAGTAGTGTCCATGGTTGCGGCAGCACTCATAGAAATGAAGCGGTTAAAATTCGCACGATCACATGGTTTTGTAAACGATCCAACGGCAAAGATGCCATTGAGTGTGTTTTGGTTGGTGCCACAATTTTTCTTTGTTGGGTCTGGAGAGGCCTTTATGTATATGGGACAATTAGACTTTTTTCTAAGAGAATGTCCTAAAGGAATGAAAACTATGAGTACAGGGTTGTTCTTGAGCACACTCTCAATAGGGTTTTTCTTTAGCTCATTATTAGTGACTCTAGTGAACAATGTGACGGGTCCAAATAAACCATGGATTGCGGATAATCTTGATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGGTGATATATTTGGCTTGTGCTAAGTGGTATGTGTACAAGGACAAGAGACTTGCTGAGGCGGGCATAGAATTGGAAGAAATAGATGCCTCTACATTTCATGCATAG
Protein sequence

>Msa0754290

MSTLPTTQGKTVPDASDYKGRPADRSTTGGWSAAAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAVQAIGVTILTISTIIPSLHPPKCKEDSKSCIQADSKQLLVMYLALYITALGTGGLKSSVSGFGSDQFDDSDDQEKKGMIKFFSWFYFFVSIGSLAAVTVLVYIQDNQGRGWGYGICAVAIVVALLVFLSGTRKYRIKQLVGSPLTQIAVVFVAAWRKRHMQLPSDSSLLYEEDDILCETPKTKKQRMPHSKQFRFLDKAAIKGIESGSAITIKEKWYISTLTDVEEVKMVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCHIGTFQIPAASMTVFLIGTILLTVPFYDRFIRPVAKKLLNNSHGFTPLQRIGVGLVLSVVSMVAAALIEMKRLKFARSHGFVNDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVTLVNNVTGPNKPWIADNLDQGRLYDFYWLLAMLSAINVVIYLACAKWYVYKDKRLAEAGIELEEIDASTFHA*