AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755390 MtrunA17_Chr5g0400241 88.029 543 16 2 1 494 1 543 0.0 965
Msa0755390 MtrunA17_Chr4g0054981 62.591 548 133 9 1 482 1 542 0.0 628
Msa0755390 MtrunA17_Chr2g0324891 33.209 268 126 8 264 483 155 417 2.83e-34 133
Msa0755390 MtrunA17_Chr1g0161431 31.329 316 142 8 8 319 5 249 2.32e-31 127
Msa0755390 MtrunA17_Chr4g0040481 33.460 263 126 7 267 482 155 415 9.28e-31 123
Msa0755390 MtrunA17_Chr4g0074421 41.837 98 57 0 223 320 86 183 2.34e-16 77.4
Msa0755390 MtrunA17_Chr4g0074401 37.405 131 78 2 12 139 15 144 9.64e-16 80.1
Msa0755390 MtrunA17_Chr4g0074401 33.523 176 92 9 265 415 198 373 1.27e-13 73.2
Msa0755390 MtrunA17_Chr4g0074411 37.209 129 77 2 14 139 18 145 9.82e-16 80.1
Msa0755390 MtrunA17_Chr4g0074411 59.259 54 22 0 266 319 197 250 2.76e-12 68.9
Msa0755390 MtrunA17_Chr4g0067981 36.364 132 80 2 9 137 26 156 3.62e-15 78.2
Msa0755390 MtrunA17_Chr4g0067981 66.667 51 17 0 269 319 214 264 2.71e-14 75.5
Msa0755390 MtrunA17_Chr3g0134481 36.306 157 90 5 14 166 8 158 8.99e-15 72.8
Msa0755390 MtrunA17_Chr3g0134481 36.765 68 43 0 252 319 114 181 7.08e-11 61.6
Msa0755390 MtrunA17_Chr3g0123131 36.220 127 75 3 12 134 11 135 1.58e-14 76.3
Msa0755390 MtrunA17_Chr3g0123131 37.500 104 58 2 221 319 147 248 6.85e-11 64.7
Msa0755390 MtrunA17_Chr2g0294911 34.211 152 89 4 14 156 29 178 2.43e-14 75.5
Msa0755390 MtrunA17_Chr2g0294911 56.863 51 22 0 269 319 210 260 5.47e-12 68.2
Msa0755390 MtrunA17_Chr3g0134461 33.065 124 80 1 14 134 8 131 2.59e-14 71.6
Msa0755390 MtrunA17_Chr3g0134461 52.542 59 28 0 263 321 136 194 4.09e-12 65.1
Msa0755390 MtrunA17_Chr7g0255711 62.745 51 19 0 269 319 90 140 8.57e-14 72.0
Msa0755390 MtrunA17_Chr2g0304841 61.111 54 21 0 266 319 209 262 8.77e-14 73.9
Msa0755390 MtrunA17_Chr2g0304841 38.095 126 70 5 14 134 18 140 1.69e-13 73.2
Msa0755390 MtrunA17_Chr3g0137101 37.600 125 72 3 14 134 8 130 9.98e-14 73.6
Msa0755390 MtrunA17_Chr3g0137101 56.140 57 25 0 263 319 191 247 1.21e-13 73.6
Msa0755390 MtrunA17_Chr8g0376881 36.000 125 74 3 14 134 25 147 1.18e-13 73.2
Msa0755390 MtrunA17_Chr8g0376881 60.784 51 20 0 269 319 208 258 3.54e-11 65.5
Msa0755390 MtrunA17_Chr6g0471041 35.385 130 79 3 12 137 12 140 8.84e-13 70.1
Msa0755390 MtrunA17_Chr4g0031961 58.824 51 21 0 269 319 130 180 9.55e-13 68.9
Msa0755390 MtrunA17_Chr1g0149841 59.615 52 21 0 268 319 189 240 1.28e-12 70.1
Msa0755390 MtrunA17_Chr1g0149841 34.677 124 77 2 14 134 5 127 1.04e-11 67.0
Msa0755390 MtrunA17_Chr4g0061021 29.134 127 84 3 10 131 26 151 3.31e-12 68.9
Msa0755390 MtrunA17_Chr3g0127941 29.167 144 93 4 8 143 44 186 5.72e-12 68.2
Msa0755390 MtrunA17_Chr1g0149851 35.200 125 75 3 14 134 5 127 1.62e-11 66.6
Msa0755390 MtrunA17_Chr3g0091641 29.134 127 84 3 10 131 17 142 2.17e-11 66.2
Msa0755390 MtrunA17_Chr7g0276361 32.258 124 75 3 15 131 11 132 2.25e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755390 AT4G18020.3 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755390 AT4G18020.2 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755390 AT4G18020.1 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755390 AT4G18020.6 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755390 AT4G18020.9 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755390 AT4G18020.8 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT4G18020.11 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT4G18020.4 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT4G18020.5 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT4G18020.10 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT4G18020.7 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755390 AT5G44190.1 36.508 252 106 9 268 482 145 379 2.31e-20 93.2
Msa0755390 AT2G20570.1 33.455 275 126 10 259 482 142 410 4.44e-19 89.7
Msa0755390 AT5G44190.2 75.000 52 13 0 268 319 145 196 5.12e-18 85.9
Msa0755390 AT2G20570.2 33.462 260 122 9 271 482 170 426 3.66e-17 84.3
Msa0755390 AT3G16857.1 37.097 124 74 2 14 134 33 155 4.32e-15 78.6
Msa0755390 AT3G16857.1 57.377 61 26 0 259 319 226 286 1.38e-14 77.0
Msa0755390 AT3G16857.2 37.097 124 74 2 14 134 33 155 4.46e-15 78.6
Msa0755390 AT3G16857.2 57.377 61 26 0 259 319 226 286 1.39e-14 77.0
Msa0755390 AT5G58080.1 57.895 57 24 0 263 319 187 243 4.64e-15 78.2
Msa0755390 AT5G58080.1 33.333 132 85 2 14 143 14 144 3.11e-12 69.3
Msa0755390 AT2G01760.3 64.815 54 19 0 266 319 131 184 6.31e-15 76.3
Msa0755390 AT3G16857.3 57.377 61 26 0 259 319 156 216 1.02e-14 77.4
Msa0755390 AT2G25180.1 34.328 134 84 2 7 137 6 138 1.17e-14 77.0
Msa0755390 AT2G25180.1 63.462 52 19 0 268 319 193 244 3.34e-13 72.4
Msa0755390 AT2G01760.1 64.815 54 19 0 266 319 196 249 1.41e-14 75.9
Msa0755390 AT2G01760.1 31.200 125 81 2 14 134 7 130 1.11e-11 67.0
Msa0755390 AT2G01760.2 64.815 54 19 0 266 319 224 277 1.95e-14 75.5
Msa0755390 AT3G10760.1 62.745 51 19 0 269 319 104 154 3.21e-14 74.3
Msa0755390 AT5G05090.1 62.745 51 19 0 269 319 80 130 4.33e-14 72.8
Msa0755390 AT4G31920.1 63.462 52 19 0 268 319 181 232 6.78e-14 74.3
Msa0755390 AT4G31920.1 36.885 122 73 2 14 132 13 133 8.83e-14 74.3
Msa0755390 AT5G24470.1 32.576 132 80 4 8 131 38 168 1.41e-13 73.6
Msa0755390 AT2G40970.1 60.784 51 20 0 269 319 104 154 4.18e-13 69.7
Msa0755390 AT5G59570.2 58.824 51 21 0 269 319 140 190 4.18e-13 70.5
Msa0755390 AT5G59570.1 58.824 51 21 0 269 319 140 190 4.18e-13 70.5
Msa0755390 AT3G46640.2 58.824 51 21 0 269 319 143 193 5.98e-13 70.1
Msa0755390 AT3G46640.1 58.824 51 21 0 269 319 143 193 5.98e-13 70.1
Msa0755390 AT3G46640.3 58.824 51 21 0 269 319 143 193 9.35e-13 69.7
Msa0755390 AT1G67710.1 34.127 126 79 2 15 137 8 132 3.65e-12 68.9
Msa0755390 AT5G49240.1 53.846 52 24 0 269 320 222 273 4.48e-12 67.4
Msa0755390 AT5G60100.2 31.405 121 78 3 16 131 62 182 8.21e-12 67.8
Msa0755390 AT5G60100.7 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755390 AT5G60100.6 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755390 AT5G60100.4 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755390 AT5G60100.5 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755390 AT5G60100.3 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755390 AT5G60100.1 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755390 AT5G61380.1 27.612 134 89 4 3 131 7 137 1.30e-11 67.4
Msa0755390 AT5G07210.2 54.902 51 23 0 269 319 221 271 1.86e-11 67.0
Msa0755390 AT5G07210.1 54.902 51 23 0 269 319 229 279 1.86e-11 67.0

Find 205 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGCTCTTCTTGCTAAA+AGG 0.234968 5_2:-9148576 None:intergenic
AGCCATTCCTTCTCGTATAT+TGG 0.261203 5_2:+9147008 Msa0755390:CDS
AAGATTACCCCTGGCGGATA+TGG 0.263394 5_2:-9147456 None:intergenic
AGAAGAACCCTAAGTCCTTT+TGG 0.287836 5_2:-9143954 None:intergenic
AAGAGCTAAAATAATGAAAT+TGG 0.290639 5_2:-9149253 None:intergenic
TCTGCTTTGGTGATTTGATA+TGG 0.291574 5_2:-9149382 None:intergenic
AAGAACAAAGCTTGAATCTA+TGG 0.296938 5_2:+9144010 Msa0755390:CDS
TTGTATGCAAAGACCGATTA+TGG 0.298780 5_2:+9147284 Msa0755390:CDS
TACCTTGGCTGAAAAGAAAA+TGG 0.312284 5_2:-9143274 None:intergenic
TGTGTTAGTGTGGTTGGATA+GGG 0.314608 5_2:+9149102 Msa0755390:three_prime_UTR
CGGACACCTTATGTAGCTTC+TGG 0.340099 5_2:+9148846 Msa0755390:three_prime_UTR
AATTTGTATTGGTGAAGTTT+TGG 0.341698 5_2:-9143245 None:intergenic
CTTGAATCTATGGACTATAA+TGG 0.346894 5_2:+9144020 Msa0755390:CDS
TGCTGACTTACTTGAGTGTA+AGG 0.351117 5_2:-9147659 None:intergenic
CTTAATCTAATCTACCATTC+TGG 0.351819 5_2:-9148782 None:intergenic
TTGTGTTAGTGTGGTTGGAT+AGG 0.353896 5_2:+9149101 Msa0755390:three_prime_UTR
ACACGGACGAAGATCGAAAA+TGG 0.354454 5_2:+9147229 Msa0755390:CDS
TGCATAGGATCTCTTCGATT+TGG 0.358006 5_2:-9147252 None:intergenic
ACCTACGAAACCTCTGATTA+AGG 0.360688 5_2:+9146331 Msa0755390:CDS
CTGTGGATGGTGGTGGGTGG+TGG 0.368315 5_2:+9148661 Msa0755390:three_prime_UTR
CATGTAGTGCGTTGTCTGTT+TGG 0.369087 5_2:-9146055 None:intergenic
CTTGTTGTTCATGACTCAAA+TGG 0.369721 5_2:+9148615 Msa0755390:three_prime_UTR
GTCCTCCGGGTTATCCTCTA+TGG 0.370689 5_2:+9147406 Msa0755390:CDS
AAACAGCTGGTGTACCGATT+TGG 0.372797 5_2:+9147382 Msa0755390:CDS
CATTATTAGATAACTCTACT+AGG 0.376355 5_2:-9149127 None:intergenic
AAGATTTCCCAAAAGGACTT+AGG 0.377585 5_2:+9143946 Msa0755390:CDS
TTTCCATCCTTGTAAATCAT+TGG 0.382036 5_2:-9143925 None:intergenic
TTGTGTAGAGGACTAGAAAA+AGG 0.382257 5_2:+9143875 Msa0755390:five_prime_UTR
TAATGTGGCAAGCCATCTTC+AGG 0.386166 5_2:+9147062 Msa0755390:CDS
TATCTAATAATGGAAAGTTT+AGG 0.393877 5_2:+9149138 Msa0755390:three_prime_UTR
TATGGCAACATGGAAGCATT+TGG 0.394078 5_2:-9144772 None:intergenic
CAGAATTGTTGTCTCCTTCA+AGG 0.400600 5_2:-9143977 None:intergenic
TACATAAGGTGTCCGTGTTA+TGG 0.406359 5_2:-9148838 None:intergenic
AACGGTTCCAAGGGTGAGAA+TGG 0.408917 5_2:+9146371 Msa0755390:CDS
GAAGGAGGTTTGAGGCCTAT+AGG 0.414096 5_2:-9148513 None:intergenic
CTTAGGGTTCTTCTCCTTGA+AGG 0.421200 5_2:+9143963 Msa0755390:CDS
AGTGCAAACCATAGCTGGTT+TGG 0.423236 5_2:-9143901 None:intergenic
CTAGTAGAGTTATCTAATAA+TGG 0.427589 5_2:+9149128 Msa0755390:three_prime_UTR
AATCTACCATTCTGGTTGGT+TGG 0.427665 5_2:-9148774 None:intergenic
TGATTGATGAGTCCAGTCTT+TGG 0.430716 5_2:+9149206 Msa0755390:three_prime_UTR
AGCTCCTGCATATCCTATGT+GGG 0.434588 5_2:+9147344 Msa0755390:CDS
AGTTAGTATCCGCCAAAGAC+TGG 0.435785 5_2:-9149218 None:intergenic
AATGGTAGATTAGATTAAGT+TGG 0.437487 5_2:+9148786 Msa0755390:three_prime_UTR
GTTGTGTACTTACTAATAGT+TGG 0.439441 5_2:-9145301 None:intergenic
ATCAGAGGTTTCGTAGGTTG+AGG 0.442825 5_2:-9146326 None:intergenic
ATGGCAACATGGAAGCATTT+GGG 0.445028 5_2:-9144771 None:intergenic
GACTCTACAGATTCTTTGAC+CGG 0.446068 5_2:-9146020 None:intergenic
TAGGTACAAACTTCAATTGA+TGG 0.446180 5_2:-9149072 None:intergenic
ATCAAACTGCAGAATATGGC+TGG 0.446826 5_2:+9148007 Msa0755390:intron
AGATTTCCCAAAAGGACTTA+GGG 0.447765 5_2:+9143947 Msa0755390:CDS
ATGGTAGATTAGATTAAGTT+GGG 0.449486 5_2:+9148787 Msa0755390:three_prime_UTR
CCATGGCTACCTTTACCTAT+AGG 0.454703 5_2:+9148498 Msa0755390:CDS
CGTGTTATGGTAGGGACCAC+AGG 0.454839 5_2:-9148825 None:intergenic
CCACAGTAACTAGCACTGTT+TGG 0.455077 5_2:-9148644 None:intergenic
AGAAATTTGAAACCTCCATC+AGG 0.457896 5_2:-9145259 None:intergenic
CTAGTTACTGTGGATGGTGG+TGG 0.462595 5_2:+9148654 Msa0755390:three_prime_UTR
ACGGTTCCAAGGGTGAGAAT+GGG 0.464644 5_2:+9146372 Msa0755390:CDS
GGTAAAGTGCAGCGCGTTGA+AGG 0.465837 5_2:-9143165 None:intergenic
ACAATGATGCATGCAACAAA+TGG 0.466128 5_2:+9148879 Msa0755390:three_prime_UTR
TTCAGGTGCATGTGGATGCA+TGG 0.466852 5_2:+9147597 Msa0755390:intron
TGTACCGATTTGGAGTCCTC+CGG 0.467682 5_2:+9147392 Msa0755390:CDS
CAGCTCCTGCATATCCTATG+TGG 0.469307 5_2:+9147343 Msa0755390:CDS
TTTGAGGTGGAGGCAACATT+GGG 0.470593 5_2:-9147625 None:intergenic
CGATTAGCTTTATTCTCACA+TGG 0.470968 5_2:-9146479 None:intergenic
ATGCATGGGCCAATGCCATA+TGG 0.471531 5_2:+9148706 Msa0755390:three_prime_UTR
TTGGCAGTGCAAACCATAGC+TGG 0.472215 5_2:-9143906 None:intergenic
AATGGCCCACGAATTTGTAT+TGG 0.472547 5_2:-9143256 None:intergenic
TAAGGGATACAGTGAGTTTG+AGG 0.473363 5_2:-9147641 None:intergenic
GATTATTACAACAGTCCATA+TGG 0.473847 5_2:-9148721 None:intergenic
ACAAAATAATTACCTGAAGA+TGG 0.478335 5_2:-9147074 None:intergenic
AGGCCTCAAACCTCCTTCAA+TGG 0.480176 5_2:+9148518 Msa0755390:CDS
CATGTGAGAATAAAGCTAAT+CGG 0.480529 5_2:+9146480 Msa0755390:CDS
AAAGTTCATTACCTCCACTA+TGG 0.481628 5_2:-9144790 None:intergenic
AGCAGTGGATTATAGTTATC+CGG 0.482719 5_2:+9148045 Msa0755390:CDS
TAGTTACTGTGGATGGTGGT+GGG 0.483936 5_2:+9148655 Msa0755390:three_prime_UTR
TCAGGTGCATGTGGATGCAT+GGG 0.484304 5_2:+9147598 Msa0755390:intron
AAATAATGAAATTGGTAATG+AGG 0.484572 5_2:-9149245 None:intergenic
CACATAGGATATGCAGGAGC+TGG 0.488577 5_2:-9147342 None:intergenic
TTCAGCTTGTCCTCAGAAAG+TGG 0.491885 5_2:-9145845 None:intergenic
TATGGTGGATAGGCCATAAT+CGG 0.494071 5_2:-9147297 None:intergenic
TGAAGCCCCATTCTCACCCT+TGG 0.498280 5_2:-9146378 None:intergenic
ATGTTCATTATCACTAAACT+TGG 0.498521 5_2:-9146111 None:intergenic
ATTGATGCAGGCAGAGGAAG+TGG 0.499805 5_2:+9148443 Msa0755390:intron
TGTTAGTGTGGTTGGATAGG+GGG 0.501718 5_2:+9149104 Msa0755390:three_prime_UTR
AGTGGTGGACAAGGCTGTAA+AGG 0.501990 5_2:+9148461 Msa0755390:CDS
AATAATGAAATTGGTAATGA+GGG 0.502570 5_2:-9149244 None:intergenic
GGATGGAAAGATTTCCCAAA+AGG 0.504062 5_2:+9143939 Msa0755390:CDS
AATTGAGGAGTCGAAGGAGC+CGG 0.504982 5_2:-9146161 None:intergenic
GTTTGAGGTGGAGGCAACAT+TGG 0.505444 5_2:-9147626 None:intergenic
TTCAGACAGAGCGCTTGCCT+CGG 0.507470 5_2:-9145988 None:intergenic
GGTTTGAGGCCTATAGGTAA+AGG 0.507845 5_2:-9148507 None:intergenic
CTGGTTGGTTGGAGCCTAAG+AGG 0.509344 5_2:-9148763 None:intergenic
CAGCTGTTTGACTTCCGTGT+TGG 0.509674 5_2:-9147368 None:intergenic
TCTGTCTGAATCGCTTAAAC+CGG 0.513162 5_2:+9146001 Msa0755390:CDS
GTGAAGGCAGTGGAACATCT+AGG 0.515004 5_2:+9146976 Msa0755390:CDS
TACAACAGTCCATATGGCAT+TGG 0.515441 5_2:-9148715 None:intergenic
CTCCAATATACGAGAAGGAA+TGG 0.515998 5_2:-9147010 None:intergenic
GGACACCTTATGTAGCTTCT+GGG 0.516193 5_2:+9148847 Msa0755390:three_prime_UTR
TATCCATTGAAGGAGGTTTG+AGG 0.516912 5_2:-9148521 None:intergenic
CATTGGAAGCCATATCCGCC+AGG 0.517092 5_2:+9147447 Msa0755390:CDS
GGAAAGTTTAGGTAGGAAGT+AGG 0.518233 5_2:+9149149 Msa0755390:three_prime_UTR
ATGCTTCCATGTTGCCATAG+TGG 0.519336 5_2:+9144776 Msa0755390:CDS
GACGGCAAGCGATAAATATC+CGG 0.521710 5_2:+9146142 Msa0755390:CDS
AGCATGTAGTAACAATTATG+AGG 0.522586 5_2:+9149298 Msa0755390:three_prime_UTR
CATTTCCCAGAAGCTACATA+AGG 0.526573 5_2:-9148852 None:intergenic
AAAGGATGCCAAACCAGCTA+TGG 0.530919 5_2:+9143893 Msa0755390:exon
ATACAGTGAGTTTGAGGTGG+AGG 0.531317 5_2:-9147635 None:intergenic
TGCACTGCCAATGATTTACA+AGG 0.534699 5_2:+9143918 Msa0755390:CDS
TGGTGGACAGACAAACTTGC+TGG 0.535931 5_2:+9148678 Msa0755390:three_prime_UTR
GTGAGTATAAGCTGCCCTGA+TGG 0.537521 5_2:+9145244 Msa0755390:CDS
ATCTAATCTACCATTCTGGT+TGG 0.537652 5_2:-9148778 None:intergenic
GTGTTAGTGTGGTTGGATAG+GGG 0.538343 5_2:+9149103 Msa0755390:three_prime_UTR
CTTTCTGTAGGCTGCCATAG+AGG 0.540911 5_2:-9147420 None:intergenic
TAACCCGGAGGACTCCAAAT+CGG 0.541856 5_2:-9147396 None:intergenic
TATGGCAGCCTACAGAAAGT+TGG 0.542411 5_2:+9147424 Msa0755390:CDS
CTTCCGTGTTGGCCCCACAT+AGG 0.543505 5_2:-9147357 None:intergenic
CTCAATTAAAACAAGGGGCA+AGG 0.543629 5_2:+9146177 Msa0755390:CDS
ATTCTCACCCTTGGAACCGT+TGG 0.545261 5_2:-9146369 None:intergenic
TGGCCCCACATAGGATATGC+AGG 0.545338 5_2:-9147348 None:intergenic
CAGTAACTAGCACTGTTTGG+TGG 0.546715 5_2:-9148641 None:intergenic
TCCAACACACTATCCATTGA+AGG 0.547337 5_2:-9148531 None:intergenic
GTACCGATTTGGAGTCCTCC+GGG 0.547442 5_2:+9147393 Msa0755390:CDS
GGCAGAGGAAGTGGTGGACA+AGG 0.548339 5_2:+9148452 Msa0755390:intron
AAGGTGTGATTAGAATGATA+TGG 0.548662 5_2:-9147315 None:intergenic
TTGTTGTTCATGACTCAAAT+GGG 0.550319 5_2:+9148616 Msa0755390:three_prime_UTR
GCCTTAATCAGAGGTTTCGT+AGG 0.552358 5_2:-9146332 None:intergenic
TTGATGAGTCCAGTCTTTGG+CGG 0.552528 5_2:+9149209 Msa0755390:three_prime_UTR
TTCCAATGCCAACTTTCTGT+AGG 0.557441 5_2:-9147432 None:intergenic
ACTTGCTGGCAGACATGCAT+GGG 0.557989 5_2:+9148692 Msa0755390:three_prime_UTR
GCAGAAGAACAAGAACAGAT+TGG 0.561014 5_2:+9143837 Msa0755390:intron
TAAGGTGTCCGTGTTATGGT+AGG 0.567111 5_2:-9148834 None:intergenic
AGTAACTAGCACTGTTTGGT+GGG 0.568901 5_2:-9148640 None:intergenic
ATACAATAGTTCCTTTGCAT+AGG 0.572699 5_2:-9147267 None:intergenic
GGGATACAGTGAGTTTGAGG+TGG 0.573814 5_2:-9147638 None:intergenic
TCTTCTTCCGCCTTAATCAG+AGG 0.577092 5_2:-9146341 None:intergenic
TCCTTCAATGGATAGTGTGT+TGG 0.579357 5_2:+9148530 Msa0755390:CDS
CAAATTTCTCGAGAATGCGA+AGG 0.579566 5_2:+9145273 Msa0755390:CDS
AATATCAATAGATTTAGATA+AGG 0.579803 5_2:+9146085 Msa0755390:CDS
AGCCTACAGAAAGTTGGCAT+TGG 0.580116 5_2:+9147430 Msa0755390:CDS
ACAAATGGAGATTACATACA+TGG 0.580116 5_2:+9148894 Msa0755390:three_prime_UTR
GCTGACTTACTTGAGTGTAA+GGG 0.580632 5_2:-9147658 None:intergenic
TTACTGTGGATGGTGGTGGG+TGG 0.582014 5_2:+9148658 Msa0755390:three_prime_UTR
TAATAATGGAAAGTTTAGGT+AGG 0.582334 5_2:+9149142 Msa0755390:three_prime_UTR
GTCTGTTTGGAGCTGCAACA+TGG 0.584513 5_2:-9146042 None:intergenic
TAGGCTCCAACCAACCAGAA+TGG 0.584546 5_2:+9148768 Msa0755390:three_prime_UTR
ACTTCACCAATACAAATTCG+TGG 0.586725 5_2:+9143250 Msa0755390:five_prime_UTR
CTGCCAATGATTTACAAGGA+TGG 0.587055 5_2:+9143922 Msa0755390:CDS
TCGACTCCTCAATTAAAACA+AGG 0.587700 5_2:+9146170 Msa0755390:CDS
ATTAACTCCAATATACGAGA+AGG 0.590177 5_2:-9147015 None:intergenic
GTAAAGTGCAGCGCGTTGAA+GGG 0.590995 5_2:-9143164 None:intergenic
TGGTTGGTTGGAGCCTAAGA+GGG 0.591259 5_2:-9148762 None:intergenic
TTGGCAGCATGTTGTTCACA+AGG 0.591380 5_2:+9145874 Msa0755390:CDS
TCAAACTGCAGAATATGGCT+GGG 0.595527 5_2:+9148008 Msa0755390:intron
TGATCTGCTTACTTGTGTAG+AGG 0.596929 5_2:+9143863 Msa0755390:five_prime_UTR
CGGTTTGACAAGGCATAATG+TGG 0.597828 5_2:+9147047 Msa0755390:CDS
CCTATAGGTAAAGGTAGCCA+TGG 0.598962 5_2:-9148498 None:intergenic
CGGTTCCAAGGGTGAGAATG+GGG 0.600958 5_2:+9146373 Msa0755390:CDS
ACTACTTGAGATTGCTGACA+AGG 0.601057 5_2:-9144748 None:intergenic
AACTTGCTGGCAGACATGCA+TGG 0.602656 5_2:+9148691 Msa0755390:three_prime_UTR
TTGGAGTTAATGAAAGTCGA+CGG 0.603528 5_2:+9147027 Msa0755390:CDS
AGGAGGCAATAAACAAGCCA+TGG 0.604570 5_2:+9148481 Msa0755390:CDS
AAGTTTCTCGGCAACGCTGG+TGG 0.606145 5_2:+9146419 Msa0755390:CDS
AGTATAAGCTGCCCTGATGG+AGG 0.607969 5_2:+9145247 Msa0755390:CDS
ATTAGAATGATATGGTGGAT+AGG 0.608161 5_2:-9147307 None:intergenic
ATCGAAGAGATCCTATGCAA+AGG 0.609454 5_2:+9147256 Msa0755390:CDS
ATATGCAGGAGCTGGAGGAA+AGG 0.610602 5_2:-9147334 None:intergenic
CCTCACTAAACCACTTTCTG+AGG 0.611321 5_2:+9145835 Msa0755390:CDS
CCAAACAGTGCTAGTTACTG+TGG 0.612138 5_2:+9148644 Msa0755390:three_prime_UTR
AAGGTGTCCGTGTTATGGTA+GGG 0.612805 5_2:-9148833 None:intergenic
CGACTCCTCAATTAAAACAA+GGG 0.616068 5_2:+9146171 Msa0755390:CDS
GTGTTATGGTAGGGACCACA+GGG 0.616784 5_2:-9148824 None:intergenic
ATTGGAAGCCATATCCGCCA+GGG 0.619064 5_2:+9147448 Msa0755390:CDS
GCTCCTGCATATCCTATGTG+GGG 0.621371 5_2:+9147345 Msa0755390:CDS
TTGGATGAACTTTCTAAACA+AGG 0.621400 5_2:+9148549 Msa0755390:CDS
GGCTGCCATAGAGGATAACC+CGG 0.621410 5_2:-9147411 None:intergenic
CCTCAGAAAGTGGTTTAGTG+AGG 0.621536 5_2:-9145835 None:intergenic
CAACACGGAAGTCAAACAGC+TGG 0.623780 5_2:+9147369 Msa0755390:CDS
GGTGGACAAGGCTGTAAAGG+AGG 0.624645 5_2:+9148464 Msa0755390:CDS
CACAATGATGAAGTGCATTG+CGG 0.626806 5_2:+9145578 Msa0755390:CDS
ATAGGATATGCAGGAGCTGG+AGG 0.633192 5_2:-9147339 None:intergenic
TGAAAGTCGACGGTTTGACA+AGG 0.634861 5_2:+9147037 Msa0755390:CDS
TATCCTATGTGGGGCCAACA+CGG 0.635664 5_2:+9147354 Msa0755390:CDS
CTTCACCAATACAAATTCGT+GGG 0.636999 5_2:+9143251 Msa0755390:five_prime_UTR
GAAATTTGAAACCTCCATCA+GGG 0.638403 5_2:-9145258 None:intergenic
GCTTCAATTCAACAAATGTG+TGG 0.639298 5_2:-9148982 None:intergenic
CAATCAGGCATTCAATGCCG+AGG 0.641798 5_2:+9145971 Msa0755390:intron
TCATGAACAACAAGTCAGCA+TGG 0.646375 5_2:-9148606 None:intergenic
GATGCACAACGCTAAAGCAG+TGG 0.647084 5_2:+9148030 Msa0755390:CDS
GACTCCTCAATTAAAACAAG+GGG 0.647576 5_2:+9146172 Msa0755390:CDS
AACACACTATCCATTGAAGG+AGG 0.656403 5_2:-9148528 None:intergenic
ACAGTGCTAGTTACTGTGGA+TGG 0.657988 5_2:+9148648 Msa0755390:three_prime_UTR
AGACAAATCGAAGAAAACAA+AGG 0.658823 5_2:-9149325 None:intergenic
TAATGAACATGAGAATTCGA+CGG 0.659183 5_2:+9146124 Msa0755390:CDS
GTGTGATTAGAATGATATGG+TGG 0.660247 5_2:-9147312 None:intergenic
CTGTGGTCCCTACCATAACA+CGG 0.660405 5_2:+9148826 Msa0755390:three_prime_UTR
GATGCAGGCAGAGGAAGTGG+TGG 0.661975 5_2:+9148446 Msa0755390:intron
CTTCCATGTTGCCATAGTGG+AGG 0.668416 5_2:+9144779 Msa0755390:CDS
TTACCTCCACTATGGCAACA+TGG 0.672571 5_2:-9144782 None:intergenic
TACGAAACCTCTGATTAAGG+CGG 0.686443 5_2:+9146334 Msa0755390:CDS
CAGGTGCATGTGGATGCATG+GGG 0.691891 5_2:+9147599 Msa0755390:intron
CAAGAGACAGATCATCCACA+CGG 0.695941 5_2:+9147212 Msa0755390:intron
TTGGAAGCCATATCCGCCAG+GGG 0.704021 5_2:+9147449 Msa0755390:CDS
GTGCTAGTTACTGTGGATGG+TGG 0.720596 5_2:+9148651 Msa0755390:three_prime_UTR
TGCCATAGAGGATAACCCGG+AGG 0.746099 5_2:-9147408 None:intergenic
TGTTATGGTAGGGACCACAG+GGG 0.833590 5_2:-9148823 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAGATAAAATTAAACTA+AGG - chr5_2:9144604-9144623 None:intergenic 10.0%
!!! TTTTCTAATTCAATATTTTA+TGG + chr5_2:9145684-9145703 Msa0755390:intron 10.0%
!! AAATAAAAATGACATATATA+TGG + chr5_2:9147136-9147155 Msa0755390:intron 10.0%
!! ATAAAAAACTGTACTTTAAT+TGG - chr5_2:9143598-9143617 None:intergenic 15.0%
!! AAAAATTAACTTTATTCACA+TGG - chr5_2:9143696-9143715 None:intergenic 15.0%
!! TGTTTAAAAAAAATGAAAAG+TGG + chr5_2:9144387-9144406 Msa0755390:intron 15.0%
!!! GTTTAATTTTATCTTTATTG+TGG + chr5_2:9144606-9144625 Msa0755390:intron 15.0%
!! AAGCAAAAAATAAACTAAAA+AGG + chr5_2:9144867-9144886 Msa0755390:intron 15.0%
!! TAATTAAAATGATGTGAATA+TGG + chr5_2:9144906-9144925 Msa0755390:intron 15.0%
!! ATTTACTATGAACATTATAT+AGG + chr5_2:9145917-9145936 Msa0755390:intron 15.0%
!! AATATCAATAGATTTAGATA+AGG + chr5_2:9146085-9146104 Msa0755390:CDS 15.0%
!!! TAGAACATCATATATTTTTT+TGG + chr5_2:9146857-9146876 Msa0755390:intron 15.0%
!! ATATCTAATCAAAATTACTT+TGG - chr5_2:9147983-9148002 None:intergenic 15.0%
!! TATTGTAAAATTGATACAAT+TGG + chr5_2:9148227-9148246 Msa0755390:intron 15.0%
!!! TTAATTAATTTGTGATCTCA+TGG + chr5_2:9143809-9143828 Msa0755390:intron 20.0%
!! TTATTCTATTTATGTGCATT+TGG + chr5_2:9144478-9144497 Msa0755390:intron 20.0%
!! AGATAAAATTAAACTAAGGT+TGG - chr5_2:9144600-9144619 None:intergenic 20.0%
!! AGTATATATCTTATATTGTC+GGG - chr5_2:9145142-9145161 None:intergenic 20.0%
!! CAGTATATATCTTATATTGT+CGG - chr5_2:9145143-9145162 None:intergenic 20.0%
!! ATATAAGTGACAGTTAAAAT+TGG - chr5_2:9145438-9145457 None:intergenic 20.0%
!! AAAATATATGATGTTCTAAC+CGG - chr5_2:9146855-9146874 None:intergenic 20.0%
!!! TATGAAATAACTGATTTTTC+AGG + chr5_2:9147580-9147599 Msa0755390:intron 20.0%
!! AAAATGACTTGAATTTAAAC+AGG + chr5_2:9147912-9147931 Msa0755390:intron 20.0%
!! AAATGACTTGAATTTAAACA+GGG + chr5_2:9147913-9147932 Msa0755390:intron 20.0%
!!! TATACTATTAATCAAGTTGA+AGG - chr5_2:9148096-9148115 None:intergenic 20.0%
!! AGTAACAATTGTAACATTAA+CGG + chr5_2:9148193-9148212 Msa0755390:intron 20.0%
!!! TATCTAATAATGGAAAGTTT+AGG + chr5_2:9149138-9149157 Msa0755390:three_prime_UTR 20.0%
!!! AATAATGAAATTGGTAATGA+GGG - chr5_2:9149247-9149266 None:intergenic 20.0%
!!! AAATAATGAAATTGGTAATG+AGG - chr5_2:9149248-9149267 None:intergenic 20.0%
!! AAGAGCTAAAATAATGAAAT+TGG - chr5_2:9149256-9149275 None:intergenic 20.0%
!!! TTTTTTTCTGCATATGTTTG+TGG + chr5_2:9143079-9143098 Msa0755390:five_prime_UTR 25.0%
!!! AATTTGTATTGGTGAAGTTT+TGG - chr5_2:9143248-9143267 None:intergenic 25.0%
! TGTATGTTGAAATAATACCT+TGG - chr5_2:9143292-9143311 None:intergenic 25.0%
! TCAATAGTCCTTATGTTATA+TGG + chr5_2:9144159-9144178 Msa0755390:intron 25.0%
! TAAGATCAAGCATCAAAAAA+AGG - chr5_2:9144286-9144305 None:intergenic 25.0%
!! TAAAAAGGATTTTGTCTAGT+AGG + chr5_2:9144882-9144901 Msa0755390:intron 25.0%
! CATTACAATATACTACAACT+TGG - chr5_2:9145112-9145131 None:intergenic 25.0%
! GGTTATAAATCATATGATCA+AGG - chr5_2:9145201-9145220 None:intergenic 25.0%
! CAGTTAAAATTGGATTTGAA+AGG - chr5_2:9145428-9145447 None:intergenic 25.0%
! ATGAAAAATTGCAAGTATCA+TGG - chr5_2:9145529-9145548 None:intergenic 25.0%
!!! CATTTTTTCTGTTTATAGCT+TGG + chr5_2:9145800-9145819 Msa0755390:intron 25.0%
! ATGTTCATTATCACTAAACT+TGG - chr5_2:9146114-9146133 None:intergenic 25.0%
!!! TTTCCAAAGTTTTGTATAAC+CGG + chr5_2:9146709-9146728 Msa0755390:intron 25.0%
! AAATATATGATGTTCTAACC+GGG - chr5_2:9146854-9146873 None:intergenic 25.0%
! ACAAAATAATTACCTGAAGA+TGG - chr5_2:9147077-9147096 None:intergenic 25.0%
! ATATGTATCTATCACTATTC+TGG + chr5_2:9147106-9147125 Msa0755390:intron 25.0%
!!! ATTTTTTCCGTTCATATGTA+TGG + chr5_2:9147506-9147525 Msa0755390:intron 25.0%
!! CTTTGCTAGTTATTTAAGAT+AGG + chr5_2:9147763-9147782 Msa0755390:intron 25.0%
!! GTCTTACATATGATGTTTTT+CGG - chr5_2:9147947-9147966 None:intergenic 25.0%
! TGATTAATAGTATAGCTCAA+TGG + chr5_2:9148102-9148121 Msa0755390:intron 25.0%
! AATTGTAACATTAACGGTTT+AGG + chr5_2:9148199-9148218 Msa0755390:intron 25.0%
! CCTTTCTATTATTCAAACTT+AGG - chr5_2:9148298-9148317 None:intergenic 25.0%
! CCTAAGTTTGAATAATAGAA+AGG + chr5_2:9148295-9148314 Msa0755390:intron 25.0%
!!! GTATTTGTTATCTTTTGAAC+CGG + chr5_2:9148383-9148402 Msa0755390:intron 25.0%
! ATTCTTGTTCTAACGATATT+TGG + chr5_2:9148406-9148425 Msa0755390:intron 25.0%
! AATGGTAGATTAGATTAAGT+TGG + chr5_2:9148786-9148805 Msa0755390:three_prime_UTR 25.0%
! ATGGTAGATTAGATTAAGTT+GGG + chr5_2:9148787-9148806 Msa0755390:three_prime_UTR 25.0%
!!! ATTTTTTTGGTTTTAGCAAG+TGG - chr5_2:9148934-9148953 None:intergenic 25.0%
!! AAAAATTGGTAGCTAAAAAC+TGG + chr5_2:9148959-9148978 Msa0755390:three_prime_UTR 25.0%
! GTTCAGATACAAAAAATTGA+TGG + chr5_2:9149040-9149059 Msa0755390:three_prime_UTR 25.0%
! CATTATTAGATAACTCTACT+AGG - chr5_2:9149130-9149149 None:intergenic 25.0%
! CTAGTAGAGTTATCTAATAA+TGG + chr5_2:9149128-9149147 Msa0755390:three_prime_UTR 25.0%
!! TAATAATGGAAAGTTTAGGT+AGG + chr5_2:9149142-9149161 Msa0755390:three_prime_UTR 25.0%
! GTTCATTCTCTCTTTCTTTT+TGG + chr5_2:9143352-9143371 Msa0755390:intron 30.0%
TTTCCATCCTTGTAAATCAT+TGG - chr5_2:9143928-9143947 None:intergenic 30.0%
AAGAACAAAGCTTGAATCTA+TGG + chr5_2:9144010-9144029 Msa0755390:CDS 30.0%
! CTTGAATCTATGGACTATAA+TGG + chr5_2:9144020-9144039 Msa0755390:CDS 30.0%
! TTGATCCCATATTTTTCGTT+TGG + chr5_2:9144052-9144071 Msa0755390:intron 30.0%
ATGCCATTCTATTGAAAAGA+GGG - chr5_2:9144119-9144138 None:intergenic 30.0%
AAAAGTGGTCCAAATTCTAA+AGG + chr5_2:9144402-9144421 Msa0755390:intron 30.0%
! TCCAAATTCTAAAGGTAATG+TGG + chr5_2:9144410-9144429 Msa0755390:intron 30.0%
!! TCCACATTACCTTTAGAATT+TGG - chr5_2:9144414-9144433 None:intergenic 30.0%
ATATTCGCATGGAAACTAAA+AGG - chr5_2:9144514-9144533 None:intergenic 30.0%
AGAAACTGTATAGAAAAGTG+AGG - chr5_2:9144706-9144725 None:intergenic 30.0%
!! ATGATTTTCTGTCATTTCTG+CGG - chr5_2:9144822-9144841 None:intergenic 30.0%
CTAAAAGATACTTTCTGCAA+AGG + chr5_2:9144980-9144999 Msa0755390:intron 30.0%
! TTTTCATCTTATGCGTTACT+CGG + chr5_2:9145055-9145074 Msa0755390:intron 30.0%
GTTGTGTACTTACTAATAGT+TGG - chr5_2:9145304-9145323 None:intergenic 30.0%
TATATGAGAGCAGACAAATT+AGG - chr5_2:9145331-9145350 None:intergenic 30.0%
!! AACTTCTAGGAAGTACATTT+TGG - chr5_2:9145388-9145407 None:intergenic 30.0%
AGGACAAGCTGAAAAATATT+TGG + chr5_2:9145855-9145874 Msa0755390:CDS 30.0%
GTTGTTGAATTCAATCAATC+AGG + chr5_2:9145956-9145975 Msa0755390:intron 30.0%
TAATGAACATGAGAATTCGA+CGG + chr5_2:9146124-9146143 Msa0755390:CDS 30.0%
TGCTCAATAGAAAAAGAAAG+TGG + chr5_2:9146236-9146255 Msa0755390:intron 30.0%
GCTCAATAGAAAAAGAAAGT+GGG + chr5_2:9146237-9146256 Msa0755390:intron 30.0%
CTCAATAGAAAAAGAAAGTG+GGG + chr5_2:9146238-9146257 Msa0755390:intron 30.0%
CCACAGAATAAAAAGTTTCT+CGG + chr5_2:9146407-9146426 Msa0755390:CDS 30.0%
!! TTAACAGCACGTGTTTTATT+TGG - chr5_2:9146455-9146474 None:intergenic 30.0%
CATGTGAGAATAAAGCTAAT+CGG + chr5_2:9146480-9146499 Msa0755390:CDS 30.0%
!! AAGTTGATATCTATAGCACT+AGG + chr5_2:9146665-9146684 Msa0755390:intron 30.0%
!!! TTGCATATCCTTATTTTTCC+CGG + chr5_2:9146833-9146852 Msa0755390:intron 30.0%
TGATTATCTGATTACACTTC+TGG + chr5_2:9146902-9146921 Msa0755390:intron 30.0%
ATTAACTCCAATATACGAGA+AGG - chr5_2:9147018-9147037 None:intergenic 30.0%
ATACAATAGTTCCTTTGCAT+AGG - chr5_2:9147270-9147289 None:intergenic 30.0%
!! ATTAGAATGATATGGTGGAT+AGG - chr5_2:9147310-9147329 None:intergenic 30.0%
AAGGTGTGATTAGAATGATA+TGG - chr5_2:9147318-9147337 None:intergenic 30.0%
! TTTTTATCCGAAATCAAAGC+AGG + chr5_2:9147477-9147496 Msa0755390:intron 30.0%
! TGTATATCCTGCTTTGATTT+CGG - chr5_2:9147487-9147506 None:intergenic 30.0%
AAACAAGCCATACATATGAA+CGG - chr5_2:9147516-9147535 None:intergenic 30.0%
AAGTCAGCAAATTGAATACT+TGG + chr5_2:9147673-9147692 Msa0755390:intron 30.0%
CACATGCTTGAATTAACTAT+TGG - chr5_2:9147731-9147750 None:intergenic 30.0%
TCGAACACAGACATTAAAAA+TGG - chr5_2:9147861-9147880 None:intergenic 30.0%
TTTCATCAAACTGCAGAATA+TGG + chr5_2:9148003-9148022 Msa0755390:intron 30.0%
! CAAGTTGAAGGAAACATAAA+GGG - chr5_2:9148084-9148103 None:intergenic 30.0%
!! TCAAGTTGAAGGAAACATAA+AGG - chr5_2:9148085-9148104 None:intergenic 30.0%
CAGTATTACACACCAATTAA+GGG - chr5_2:9148161-9148180 None:intergenic 30.0%
ACAGTATTACACACCAATTA+AGG - chr5_2:9148162-9148181 None:intergenic 30.0%
ATATCGTTAGAACAAGAATC+CGG - chr5_2:9148405-9148424 None:intergenic 30.0%
TGTGTTATATTCATTGATGC+AGG + chr5_2:9148431-9148450 Msa0755390:intron 30.0%
TTGGATGAACTTTCTAAACA+AGG + chr5_2:9148549-9148568 Msa0755390:CDS 30.0%
! TTGTTGTTCATGACTCAAAT+GGG + chr5_2:9148616-9148635 Msa0755390:three_prime_UTR 30.0%
GATTATTACAACAGTCCATA+TGG - chr5_2:9148724-9148743 None:intergenic 30.0%
CTTAATCTAATCTACCATTC+TGG - chr5_2:9148785-9148804 None:intergenic 30.0%
ACAAATGGAGATTACATACA+TGG + chr5_2:9148894-9148913 Msa0755390:three_prime_UTR 30.0%
TAGGTACAAACTTCAATTGA+TGG - chr5_2:9149075-9149094 None:intergenic 30.0%
CACACTAACACAAAAAACAT+AGG - chr5_2:9149094-9149113 None:intergenic 30.0%
!!! CTATGTTTTTTGTGTTAGTG+TGG + chr5_2:9149092-9149111 Msa0755390:three_prime_UTR 30.0%
AGCATGTAGTAACAATTATG+AGG + chr5_2:9149298-9149317 Msa0755390:three_prime_UTR 30.0%
AGACAAATCGAAGAAAACAA+AGG - chr5_2:9149328-9149347 None:intergenic 30.0%
ACTTCACCAATACAAATTCG+TGG + chr5_2:9143250-9143269 Msa0755390:five_prime_UTR 35.0%
CTTCACCAATACAAATTCGT+GGG + chr5_2:9143251-9143270 Msa0755390:five_prime_UTR 35.0%
TACCTTGGCTGAAAAGAAAA+TGG - chr5_2:9143277-9143296 None:intergenic 35.0%
!! TTGTCTTGTTGTGGTGTTAT+TGG + chr5_2:9143471-9143490 Msa0755390:intron 35.0%
TTTCTCCACAAGATCTTAAC+TGG + chr5_2:9143497-9143516 Msa0755390:intron 35.0%
TTCTCCACAAGATCTTAACT+GGG + chr5_2:9143498-9143517 Msa0755390:intron 35.0%
AAAACCCAGTTAAGATCTTG+TGG - chr5_2:9143505-9143524 None:intergenic 35.0%
TTGTGTAGAGGACTAGAAAA+AGG + chr5_2:9143875-9143894 Msa0755390:five_prime_UTR 35.0%
AAGATTTCCCAAAAGGACTT+AGG + chr5_2:9143946-9143965 Msa0755390:CDS 35.0%
AGATTTCCCAAAAGGACTTA+GGG + chr5_2:9143947-9143966 Msa0755390:CDS 35.0%
GCAAGCCAAACGAAAAATAT+GGG - chr5_2:9144060-9144079 None:intergenic 35.0%
ACCATCTTTACTAAGGAAAG+TGG - chr5_2:9144095-9144114 None:intergenic 35.0%
TGCCATTCTATTGAAAAGAG+GGG - chr5_2:9144118-9144137 None:intergenic 35.0%
GATGCCATTCTATTGAAAAG+AGG - chr5_2:9144120-9144139 None:intergenic 35.0%
TAGAATGGCATCTTGTAAAG+TGG + chr5_2:9144128-9144147 Msa0755390:intron 35.0%
CCAGAGAACCATATAACATA+AGG - chr5_2:9144170-9144189 None:intergenic 35.0%
CCTTATGTTATATGGTTCTC+TGG + chr5_2:9144167-9144186 Msa0755390:intron 35.0%
! TATGGTTCTCTGGAAATTTG+TGG + chr5_2:9144177-9144196 Msa0755390:intron 35.0%
TTGATCTTAGCATATGTGTG+TGG + chr5_2:9144297-9144316 Msa0755390:intron 35.0%
! TCAGTTTTCCACGATAAAGT+CGG - chr5_2:9144456-9144475 None:intergenic 35.0%
CCAACTAATACATATTCGCA+TGG - chr5_2:9144525-9144544 None:intergenic 35.0%
CCATGCGAATATGTATTAGT+TGG + chr5_2:9144522-9144541 Msa0755390:intron 35.0%
AAAGTTCATTACCTCCACTA+TGG - chr5_2:9144793-9144812 None:intergenic 35.0%
TGTGAATATGGAGAACTTGA+CGG + chr5_2:9144918-9144937 Msa0755390:intron 35.0%
GACTTCACTCACTTAATACT+AGG - chr5_2:9145033-9145052 None:intergenic 35.0%
! GAAATTTGAAACCTCCATCA+GGG - chr5_2:9145261-9145280 None:intergenic 35.0%
! AGAAATTTGAAACCTCCATC+AGG - chr5_2:9145262-9145281 None:intergenic 35.0%
ATAAAGATCCATCCATGTTG+AGG + chr5_2:9145348-9145367 Msa0755390:intron 35.0%
TAAAGATCCATCCATGTTGA+GGG + chr5_2:9145349-9145368 Msa0755390:intron 35.0%
ACTTCCTAGAAGTTGAAAGA+AGG + chr5_2:9145394-9145413 Msa0755390:intron 35.0%
TTTGCCTTCTTTCAACTTCT+AGG - chr5_2:9145401-9145420 None:intergenic 35.0%
ATATTGAGCTACACATCACT+AGG - chr5_2:9145624-9145643 None:intergenic 35.0%
!!! TGTTTTAATTGAGGAGTCGA+AGG - chr5_2:9146170-9146189 None:intergenic 35.0%
TCGACTCCTCAATTAAAACA+AGG + chr5_2:9146170-9146189 Msa0755390:CDS 35.0%
CGACTCCTCAATTAAAACAA+GGG + chr5_2:9146171-9146190 Msa0755390:CDS 35.0%
GACTCCTCAATTAAAACAAG+GGG + chr5_2:9146172-9146191 Msa0755390:CDS 35.0%
! CCGAGAAACTTTTTATTCTG+TGG - chr5_2:9146410-9146429 None:intergenic 35.0%
!! CGATTAGCTTTATTCTCACA+TGG - chr5_2:9146482-9146501 None:intergenic 35.0%
ATCGGAAGAAGATGAAAGTA+AGG + chr5_2:9146498-9146517 Msa0755390:intron 35.0%
TGATATCTATAGCACTAGGA+TGG + chr5_2:9146669-9146688 Msa0755390:intron 35.0%
TGACCGGTTATACAAAACTT+TGG - chr5_2:9146715-9146734 None:intergenic 35.0%
ATCATGTTGGGAATATTGAC+CGG - chr5_2:9146731-9146750 None:intergenic 35.0%
TGTTCTAACCGGGAAAAATA+AGG - chr5_2:9146844-9146863 None:intergenic 35.0%
!!! AAATTTTTTGTGCAGCTCAG+CGG - chr5_2:9146956-9146975 None:intergenic 35.0%
GCTGCACAAAAAATTTGTGA+AGG + chr5_2:9146960-9146979 Msa0755390:CDS 35.0%
CAAAAAATTTGTGAAGGCAG+TGG + chr5_2:9146966-9146985 Msa0755390:CDS 35.0%
TTGGAGTTAATGAAAGTCGA+CGG + chr5_2:9147027-9147046 Msa0755390:CDS 35.0%
TTGTATGCAAAGACCGATTA+TGG + chr5_2:9147284-9147303 Msa0755390:CDS 35.0%
GTGTGATTAGAATGATATGG+TGG - chr5_2:9147315-9147334 None:intergenic 35.0%
ATCCATGATTTCTACATCAC+AGG - chr5_2:9147551-9147570 None:intergenic 35.0%
!! AGCAGTGGATTATAGTTATC+CGG + chr5_2:9148045-9148064 Msa0755390:CDS 35.0%
TAGAACATGAGATTTGATCG+TGG - chr5_2:9148260-9148279 None:intergenic 35.0%
!! CTTGTTGTTCATGACTCAAA+TGG + chr5_2:9148615-9148634 Msa0755390:three_prime_UTR 35.0%
! TCTCTCAATTTTACCCTCTT+AGG + chr5_2:9148749-9148768 Msa0755390:three_prime_UTR 35.0%
ATCTAATCTACCATTCTGGT+TGG - chr5_2:9148781-9148800 None:intergenic 35.0%
ACAATGATGCATGCAACAAA+TGG + chr5_2:9148879-9148898 Msa0755390:three_prime_UTR 35.0%
GCTTCAATTCAACAAATGTG+TGG - chr5_2:9148985-9149004 None:intergenic 35.0%
TAGTGCAAAAATGTTGCATG+TGG + chr5_2:9149007-9149026 Msa0755390:three_prime_UTR 35.0%
!!! GTTTTTTGTGTTAGTGTGGT+TGG + chr5_2:9149096-9149115 Msa0755390:three_prime_UTR 35.0%
AAGTATGAAGAGAGAGAGAG+AGG - chr5_2:9143189-9143208 None:intergenic 40.0%
AATGGCCCACGAATTTGTAT+TGG - chr5_2:9143259-9143278 None:intergenic 40.0%
!!! GTGCTAGTTTTGTCTTGTTG+TGG + chr5_2:9143462-9143481 Msa0755390:intron 40.0%
GCAGAAGAACAAGAACAGAT+TGG + chr5_2:9143837-9143856 Msa0755390:intron 40.0%
TGATCTGCTTACTTGTGTAG+AGG + chr5_2:9143863-9143882 Msa0755390:five_prime_UTR 40.0%
TGCACTGCCAATGATTTACA+AGG + chr5_2:9143918-9143937 Msa0755390:CDS 40.0%
CTGCCAATGATTTACAAGGA+TGG + chr5_2:9143922-9143941 Msa0755390:CDS 40.0%
GGATGGAAAGATTTCCCAAA+AGG + chr5_2:9143939-9143958 Msa0755390:CDS 40.0%
! GAAGAACCCTAAGTCCTTTT+GGG - chr5_2:9143956-9143975 None:intergenic 40.0%
! AGAAGAACCCTAAGTCCTTT+TGG - chr5_2:9143957-9143976 None:intergenic 40.0%
CAGAATTGTTGTCTCCTTCA+AGG - chr5_2:9143980-9143999 None:intergenic 40.0%
GGCAAGCCAAACGAAAAATA+TGG - chr5_2:9144061-9144080 None:intergenic 40.0%
! GCCACTTTCCTTAGTAAAGA+TGG + chr5_2:9144091-9144110 Msa0755390:intron 40.0%
! GTCCCCTCTTTTCAATAGAA+TGG + chr5_2:9144113-9144132 Msa0755390:intron 40.0%
CAACATGCAACTAAAACCAC+AGG - chr5_2:9144203-9144222 None:intergenic 40.0%
TGTGTGGAATTTGACTCTAG+AGG + chr5_2:9144313-9144332 Msa0755390:intron 40.0%
GTGTGGAATTTGACTCTAGA+GGG + chr5_2:9144314-9144333 Msa0755390:intron 40.0%
! TGACTCTAGAGGGCTTATAA+AGG + chr5_2:9144324-9144343 Msa0755390:intron 40.0%
TCATGATTCCGACTTTATCG+TGG + chr5_2:9144445-9144464 Msa0755390:intron 40.0%
ACTACTTGAGATTGCTGACA+AGG - chr5_2:9144751-9144770 None:intergenic 40.0%
!! ATGGCAACATGGAAGCATTT+GGG - chr5_2:9144774-9144793 None:intergenic 40.0%
!! TATGGCAACATGGAAGCATT+TGG - chr5_2:9144775-9144794 None:intergenic 40.0%
TTTGTGTCCTGCAGAAGTTT+AGG + chr5_2:9144955-9144974 Msa0755390:intron 40.0%
! TTTAGAGCCTAAACTTCTGC+AGG - chr5_2:9144965-9144984 None:intergenic 40.0%
TGCGTTACTCGGATTTATCA+TGG + chr5_2:9145066-9145085 Msa0755390:intron 40.0%
CAAATTTCTCGAGAATGCGA+AGG + chr5_2:9145273-9145292 Msa0755390:CDS 40.0%
ACTAGTAAACACCCTCAACA+TGG - chr5_2:9145363-9145382 None:intergenic 40.0%
CACAATGATGAAGTGCATTG+CGG + chr5_2:9145578-9145597 Msa0755390:CDS 40.0%
! AGTGCATTGCGGTAAGATTT+TGG + chr5_2:9145589-9145608 Msa0755390:intron 40.0%
TCTGTCTGAATCGCTTAAAC+CGG + chr5_2:9146001-9146020 Msa0755390:CDS 40.0%
GACTCTACAGATTCTTTGAC+CGG - chr5_2:9146023-9146042 None:intergenic 40.0%
!!! CTTGCCCCTTGTTTTAATTG+AGG - chr5_2:9146179-9146198 None:intergenic 40.0%
CTCAATTAAAACAAGGGGCA+AGG + chr5_2:9146177-9146196 Msa0755390:CDS 40.0%
! TTGAGCAATTAGTCTGCTCA+TGG - chr5_2:9146223-9146242 None:intergenic 40.0%
AAAGAAAGTGGGGAACATGA+CGG + chr5_2:9146248-9146267 Msa0755390:intron 40.0%
ACCTACGAAACCTCTGATTA+AGG + chr5_2:9146331-9146350 Msa0755390:CDS 40.0%
TACGAAACCTCTGATTAAGG+CGG + chr5_2:9146334-9146353 Msa0755390:CDS 40.0%
AATGGTACAGAGAAAGAGGA+AGG - chr5_2:9146627-9146646 None:intergenic 40.0%
TGCAAATGGTACAGAGAAAG+AGG - chr5_2:9146631-9146650 None:intergenic 40.0%
!! CTGATTACACTTCTGGTTCT+TGG + chr5_2:9146909-9146928 Msa0755390:intron 40.0%
!!! ACACTTCTGGTTCTTGGTTT+TGG + chr5_2:9146915-9146934 Msa0755390:intron 40.0%
AGCCATTCCTTCTCGTATAT+TGG + chr5_2:9147008-9147027 Msa0755390:CDS 40.0%
CTCCAATATACGAGAAGGAA+TGG - chr5_2:9147013-9147032 None:intergenic 40.0%
TGCATAGGATCTCTTCGATT+TGG - chr5_2:9147255-9147274 None:intergenic 40.0%
ATCGAAGAGATCCTATGCAA+AGG + chr5_2:9147256-9147275 Msa0755390:CDS 40.0%
!! TATGGTGGATAGGCCATAAT+CGG - chr5_2:9147300-9147319 None:intergenic 40.0%
TTCCAATGCCAACTTTCTGT+AGG - chr5_2:9147435-9147454 None:intergenic 40.0%
GATAAAAAGATTACCCCTGG+CGG - chr5_2:9147465-9147484 None:intergenic 40.0%
TCGGATAAAAAGATTACCCC+TGG - chr5_2:9147468-9147487 None:intergenic 40.0%
GACCTGTGATGTAGAAATCA+TGG + chr5_2:9147546-9147565 Msa0755390:intron 40.0%
!!! ACTGATTTTTCAGGTGCATG+TGG + chr5_2:9147589-9147608 Msa0755390:intron 40.0%
TAAGGGATACAGTGAGTTTG+AGG - chr5_2:9147644-9147663 None:intergenic 40.0%
! GCTGACTTACTTGAGTGTAA+GGG - chr5_2:9147661-9147680 None:intergenic 40.0%
!! TGCTGACTTACTTGAGTGTA+AGG - chr5_2:9147662-9147681 None:intergenic 40.0%
ATCAAACTGCAGAATATGGC+TGG + chr5_2:9148007-9148026 Msa0755390:intron 40.0%
TCAAACTGCAGAATATGGCT+GGG + chr5_2:9148008-9148027 Msa0755390:intron 40.0%
AAAGGGAAGAACTGCATTAC+CGG - chr5_2:9148067-9148086 None:intergenic 40.0%
CAATAACCGTTCCTACAATG+TGG + chr5_2:9148131-9148150 Msa0755390:intron 40.0%
ATATTCATTGATGCAGGCAG+AGG + chr5_2:9148437-9148456 Msa0755390:intron 40.0%
TATCCATTGAAGGAGGTTTG+AGG - chr5_2:9148524-9148543 None:intergenic 40.0%
AACACACTATCCATTGAAGG+AGG - chr5_2:9148531-9148550 None:intergenic 40.0%
TCCTTCAATGGATAGTGTGT+TGG + chr5_2:9148530-9148549 Msa0755390:CDS 40.0%
TCCAACACACTATCCATTGA+AGG - chr5_2:9148534-9148553 None:intergenic 40.0%
! TCCTTTTAGCAAGAAGAGCA+AGG + chr5_2:9148575-9148594 Msa0755390:CDS 40.0%
! CCTTTTAGCAAGAAGAGCAA+GGG + chr5_2:9148576-9148595 Msa0755390:CDS 40.0%
TCATGAACAACAAGTCAGCA+TGG - chr5_2:9148609-9148628 None:intergenic 40.0%
AGTAACTAGCACTGTTTGGT+GGG - chr5_2:9148643-9148662 None:intergenic 40.0%
TACAACAGTCCATATGGCAT+TGG - chr5_2:9148718-9148737 None:intergenic 40.0%
! AATCTACCATTCTGGTTGGT+TGG - chr5_2:9148777-9148796 None:intergenic 40.0%
! TACATAAGGTGTCCGTGTTA+TGG - chr5_2:9148841-9148860 None:intergenic 40.0%
CATTTCCCAGAAGCTACATA+AGG - chr5_2:9148855-9148874 None:intergenic 40.0%
TTGTGTTAGTGTGGTTGGAT+AGG + chr5_2:9149101-9149120 Msa0755390:three_prime_UTR 40.0%
TGTGTTAGTGTGGTTGGATA+GGG + chr5_2:9149102-9149121 Msa0755390:three_prime_UTR 40.0%
GGAAAGTTTAGGTAGGAAGT+AGG + chr5_2:9149149-9149168 Msa0755390:three_prime_UTR 40.0%
TGATTGATGAGTCCAGTCTT+TGG + chr5_2:9149206-9149225 Msa0755390:three_prime_UTR 40.0%
!! GGCCATTTTCTTTTCAGCCA+AGG + chr5_2:9143272-9143291 Msa0755390:five_prime_UTR 45.0%
AAAGGATGCCAAACCAGCTA+TGG + chr5_2:9143893-9143912 Msa0755390:exon 45.0%
AGTGCAAACCATAGCTGGTT+TGG - chr5_2:9143904-9143923 None:intergenic 45.0%
CTTAGGGTTCTTCTCCTTGA+AGG + chr5_2:9143963-9143982 Msa0755390:CDS 45.0%
AGGAAAGTGGCAAAGAAGTG+AGG - chr5_2:9144082-9144101 None:intergenic 45.0%
AGAGGGGACCATCTTTACTA+AGG - chr5_2:9144102-9144121 None:intergenic 45.0%
ATGCTTCCATGTTGCCATAG+TGG + chr5_2:9144776-9144795 Msa0755390:CDS 45.0%
TTACCTCCACTATGGCAACA+TGG - chr5_2:9144785-9144804 None:intergenic 45.0%
ATACTCACCTGCAACTCAGA+TGG - chr5_2:9145232-9145251 None:intergenic 45.0%
GAGAGCAGACAAATTAGGCT+CGG - chr5_2:9145326-9145345 None:intergenic 45.0%
GTAAACACCCTCAACATGGA+TGG - chr5_2:9145359-9145378 None:intergenic 45.0%
TGCATCGAAAATCAGGAGGA+CGG - chr5_2:9145760-9145779 None:intergenic 45.0%
CGTATGCATCGAAAATCAGG+AGG - chr5_2:9145764-9145783 None:intergenic 45.0%
GCACGTATGCATCGAAAATC+AGG - chr5_2:9145767-9145786 None:intergenic 45.0%
CCTCAGAAAGTGGTTTAGTG+AGG - chr5_2:9145838-9145857 None:intergenic 45.0%
CCTCACTAAACCACTTTCTG+AGG + chr5_2:9145835-9145854 Msa0755390:CDS 45.0%
TTCAGCTTGTCCTCAGAAAG+TGG - chr5_2:9145848-9145867 None:intergenic 45.0%
TTGGCAGCATGTTGTTCACA+AGG + chr5_2:9145874-9145893 Msa0755390:CDS 45.0%
AGCATGTTGTTCACAAGGTC+TGG + chr5_2:9145879-9145898 Msa0755390:intron 45.0%
CATGTAGTGCGTTGTCTGTT+TGG - chr5_2:9146058-9146077 None:intergenic 45.0%
GACGGCAAGCGATAAATATC+CGG + chr5_2:9146142-9146161 Msa0755390:CDS 45.0%
AAAACAAGGGGCAAGGTTAG+TGG + chr5_2:9146184-9146203 Msa0755390:intron 45.0%
ATCAGAGGTTTCGTAGGTTG+AGG - chr5_2:9146329-9146348 None:intergenic 45.0%
GCCTTAATCAGAGGTTTCGT+AGG - chr5_2:9146335-9146354 None:intergenic 45.0%
TCTTCTTCCGCCTTAATCAG+AGG - chr5_2:9146344-9146363 None:intergenic 45.0%
! GCGGAAGAAGATTTTGCCAA+CGG + chr5_2:9146353-9146372 Msa0755390:CDS 45.0%
! AGATTTTGCCAACGGTTCCA+AGG + chr5_2:9146361-9146380 Msa0755390:CDS 45.0%
! GATTTTGCCAACGGTTCCAA+GGG + chr5_2:9146362-9146381 Msa0755390:CDS 45.0%
AAAAAGTTTCTCGGCAACGC+TGG + chr5_2:9146416-9146435 Msa0755390:CDS 45.0%
CAGAGAAAGAGGAAGGAGAA+GGG - chr5_2:9146620-9146639 None:intergenic 45.0%
ACAGAGAAAGAGGAAGGAGA+AGG - chr5_2:9146621-9146640 None:intergenic 45.0%
CATGAGCGTGTGTATGCAAA+TGG - chr5_2:9146645-9146664 None:intergenic 45.0%
GCATGCAGATGCATCATGTT+GGG - chr5_2:9146743-9146762 None:intergenic 45.0%
AGCATGCAGATGCATCATGT+TGG - chr5_2:9146744-9146763 None:intergenic 45.0%
!!! CTGGTTCTTGGTTTTGGTTC+AGG + chr5_2:9146921-9146940 Msa0755390:intron 45.0%
!!! TGGTTTTGGTTCAGGTAGAC+TGG + chr5_2:9146929-9146948 Msa0755390:intron 45.0%
TAATGTGGCAAGCCATCTTC+AGG + chr5_2:9147062-9147081 Msa0755390:CDS 45.0%
CAAGAGACAGATCATCCACA+CGG + chr5_2:9147212-9147231 Msa0755390:intron 45.0%
! ATTTTCGATCTTCGTCCGTG+TGG - chr5_2:9147230-9147249 None:intergenic 45.0%
ACACGGACGAAGATCGAAAA+TGG + chr5_2:9147229-9147248 Msa0755390:CDS 45.0%
AGCTCCTGCATATCCTATGT+GGG + chr5_2:9147344-9147363 Msa0755390:CDS 45.0%
!! AAACAGCTGGTGTACCGATT+TGG + chr5_2:9147382-9147401 Msa0755390:CDS 45.0%
TATGGCAGCCTACAGAAAGT+TGG + chr5_2:9147424-9147443 Msa0755390:CDS 45.0%
AGCCTACAGAAAGTTGGCAT+TGG + chr5_2:9147430-9147449 Msa0755390:CDS 45.0%
! TTTGAGGTGGAGGCAACATT+GGG - chr5_2:9147628-9147647 None:intergenic 45.0%
! ATACAGTGAGTTTGAGGTGG+AGG - chr5_2:9147638-9147657 None:intergenic 45.0%
TTAAGGGTCGACCACATTGT+AGG - chr5_2:9148145-9148164 None:intergenic 45.0%
CAATGTGGTCGACCCTTAAT+TGG + chr5_2:9148146-9148165 Msa0755390:intron 45.0%
! CAGAGTGTCCAACTATAGTG+CGG - chr5_2:9148329-9148348 None:intergenic 45.0%
AGGAGGCAATAAACAAGCCA+TGG + chr5_2:9148481-9148500 Msa0755390:CDS 45.0%
CCTATAGGTAAAGGTAGCCA+TGG - chr5_2:9148501-9148520 None:intergenic 45.0%
CCATGGCTACCTTTACCTAT+AGG + chr5_2:9148498-9148517 Msa0755390:CDS 45.0%
! GGTTTGAGGCCTATAGGTAA+AGG - chr5_2:9148510-9148529 None:intergenic 45.0%
CCCTTGCTCTTCTTGCTAAA+AGG - chr5_2:9148579-9148598 None:intergenic 45.0%
CAGTAACTAGCACTGTTTGG+TGG - chr5_2:9148644-9148663 None:intergenic 45.0%
CCACAGTAACTAGCACTGTT+TGG - chr5_2:9148647-9148666 None:intergenic 45.0%
CCAAACAGTGCTAGTTACTG+TGG + chr5_2:9148644-9148663 Msa0755390:three_prime_UTR 45.0%
ACAGTGCTAGTTACTGTGGA+TGG + chr5_2:9148648-9148667 Msa0755390:three_prime_UTR 45.0%
! TAGTTACTGTGGATGGTGGT+GGG + chr5_2:9148655-9148674 Msa0755390:three_prime_UTR 45.0%
!!! GACCAGTTATTTTTCCCCTG+TGG + chr5_2:9148809-9148828 Msa0755390:three_prime_UTR 45.0%
GACCACAGGGGAAAAATAAC+TGG - chr5_2:9148814-9148833 None:intergenic 45.0%
! AAGGTGTCCGTGTTATGGTA+GGG - chr5_2:9148836-9148855 None:intergenic 45.0%
! TAAGGTGTCCGTGTTATGGT+AGG - chr5_2:9148837-9148856 None:intergenic 45.0%
GGACACCTTATGTAGCTTCT+GGG + chr5_2:9148847-9148866 Msa0755390:three_prime_UTR 45.0%
GTGTTAGTGTGGTTGGATAG+GGG + chr5_2:9149103-9149122 Msa0755390:three_prime_UTR 45.0%
TGTTAGTGTGGTTGGATAGG+GGG + chr5_2:9149104-9149123 Msa0755390:three_prime_UTR 45.0%
TTGATGAGTCCAGTCTTTGG+CGG + chr5_2:9149209-9149228 Msa0755390:three_prime_UTR 45.0%
AGTTAGTATCCGCCAAAGAC+TGG - chr5_2:9149221-9149240 None:intergenic 45.0%
!!! CAATTTTTTATTTATTTTTT+TGG - chr5_2:9148947-9148966 None:intergenic 5.0%
!! CAAAAAAATAAATAAAAAAT+TGG + chr5_2:9148945-9148964 Msa0755390:three_prime_UTR 5.0%
GTAAAGTGCAGCGCGTTGAA+GGG - chr5_2:9143167-9143186 None:intergenic 50.0%
TTGGCAGTGCAAACCATAGC+TGG - chr5_2:9143909-9143928 None:intergenic 50.0%
! CTCTGGAAATTTGTGGCCTG+TGG + chr5_2:9144184-9144203 Msa0755390:intron 50.0%
CTTCCATGTTGCCATAGTGG+AGG + chr5_2:9144779-9144798 Msa0755390:CDS 50.0%
GTGAGTATAAGCTGCCCTGA+TGG + chr5_2:9145244-9145263 Msa0755390:CDS 50.0%
AGTATAAGCTGCCCTGATGG+AGG + chr5_2:9145247-9145266 Msa0755390:CDS 50.0%
CAATCAGGCATTCAATGCCG+AGG + chr5_2:9145971-9145990 Msa0755390:intron 50.0%
! GTCTGTTTGGAGCTGCAACA+TGG - chr5_2:9146045-9146064 None:intergenic 50.0%
AATTGAGGAGTCGAAGGAGC+CGG - chr5_2:9146164-9146183 None:intergenic 50.0%
ATTCTCACCCTTGGAACCGT+TGG - chr5_2:9146372-9146391 None:intergenic 50.0%
AACGGTTCCAAGGGTGAGAA+TGG + chr5_2:9146371-9146390 Msa0755390:CDS 50.0%
ACGGTTCCAAGGGTGAGAAT+GGG + chr5_2:9146372-9146391 Msa0755390:CDS 50.0%
GTGAAGGCAGTGGAACATCT+AGG + chr5_2:9146976-9146995 Msa0755390:CDS 50.0%
ATATGCAGGAGCTGGAGGAA+AGG - chr5_2:9147337-9147356 None:intergenic 50.0%
ATAGGATATGCAGGAGCTGG+AGG - chr5_2:9147342-9147361 None:intergenic 50.0%
CACATAGGATATGCAGGAGC+TGG - chr5_2:9147345-9147364 None:intergenic 50.0%
CAGCTCCTGCATATCCTATG+TGG + chr5_2:9147343-9147362 Msa0755390:CDS 50.0%
GCTCCTGCATATCCTATGTG+GGG + chr5_2:9147345-9147364 Msa0755390:CDS 50.0%
TATCCTATGTGGGGCCAACA+CGG + chr5_2:9147354-9147373 Msa0755390:CDS 50.0%
! CAGCTGTTTGACTTCCGTGT+TGG - chr5_2:9147371-9147390 None:intergenic 50.0%
CAACACGGAAGTCAAACAGC+TGG + chr5_2:9147369-9147388 Msa0755390:CDS 50.0%
!! TGTACCGATTTGGAGTCCTC+CGG + chr5_2:9147392-9147411 Msa0755390:CDS 50.0%
TAACCCGGAGGACTCCAAAT+CGG - chr5_2:9147399-9147418 None:intergenic 50.0%
CTTTCTGTAGGCTGCCATAG+AGG - chr5_2:9147423-9147442 None:intergenic 50.0%
ATTGGAAGCCATATCCGCCA+GGG + chr5_2:9147448-9147467 Msa0755390:CDS 50.0%
! AAGATTACCCCTGGCGGATA+TGG - chr5_2:9147459-9147478 None:intergenic 50.0%
TTCAGGTGCATGTGGATGCA+TGG + chr5_2:9147597-9147616 Msa0755390:intron 50.0%
TCAGGTGCATGTGGATGCAT+GGG + chr5_2:9147598-9147617 Msa0755390:intron 50.0%
! GTTTGAGGTGGAGGCAACAT+TGG - chr5_2:9147629-9147648 None:intergenic 50.0%
GGGATACAGTGAGTTTGAGG+TGG - chr5_2:9147641-9147660 None:intergenic 50.0%
GATGCACAACGCTAAAGCAG+TGG + chr5_2:9148030-9148049 Msa0755390:CDS 50.0%
GGTCGACCACATTGTAGGAA+CGG - chr5_2:9148140-9148159 None:intergenic 50.0%
TTCTGCAGCCGCACTATAGT+TGG + chr5_2:9148318-9148337 Msa0755390:intron 50.0%
ATTGATGCAGGCAGAGGAAG+TGG + chr5_2:9148443-9148462 Msa0755390:intron 50.0%
!! AGTGGTGGACAAGGCTGTAA+AGG + chr5_2:9148461-9148480 Msa0755390:CDS 50.0%
! GAAGGAGGTTTGAGGCCTAT+AGG - chr5_2:9148516-9148535 None:intergenic 50.0%
AGGCCTCAAACCTCCTTCAA+TGG + chr5_2:9148518-9148537 Msa0755390:CDS 50.0%
GTGCTAGTTACTGTGGATGG+TGG + chr5_2:9148651-9148670 Msa0755390:three_prime_UTR 50.0%
! CTAGTTACTGTGGATGGTGG+TGG + chr5_2:9148654-9148673 Msa0755390:three_prime_UTR 50.0%
! TGGTGGACAGACAAACTTGC+TGG + chr5_2:9148678-9148697 Msa0755390:three_prime_UTR 50.0%
!! AACTTGCTGGCAGACATGCA+TGG + chr5_2:9148691-9148710 Msa0755390:three_prime_UTR 50.0%
! ACTTGCTGGCAGACATGCAT+GGG + chr5_2:9148692-9148711 Msa0755390:three_prime_UTR 50.0%
ATGCATGGGCCAATGCCATA+TGG + chr5_2:9148706-9148725 Msa0755390:three_prime_UTR 50.0%
! TGGTTGGTTGGAGCCTAAGA+GGG - chr5_2:9148765-9148784 None:intergenic 50.0%
TAGGCTCCAACCAACCAGAA+TGG + chr5_2:9148768-9148787 Msa0755390:three_prime_UTR 50.0%
TGTTATGGTAGGGACCACAG+GGG - chr5_2:9148826-9148845 None:intergenic 50.0%
GTGTTATGGTAGGGACCACA+GGG - chr5_2:9148827-9148846 None:intergenic 50.0%
CTGTGGTCCCTACCATAACA+CGG + chr5_2:9148826-9148845 Msa0755390:three_prime_UTR 50.0%
CGGACACCTTATGTAGCTTC+TGG + chr5_2:9148846-9148865 Msa0755390:three_prime_UTR 50.0%
GGTAAAGTGCAGCGCGTTGA+AGG - chr5_2:9143168-9143187 None:intergenic 55.0%
! TTCAGACAGAGCGCTTGCCT+CGG - chr5_2:9145991-9146010 None:intergenic 55.0%
! GGGGCAAGGTTAGTGGATGA+TGG + chr5_2:9146191-9146210 Msa0755390:intron 55.0%
GAAAGTGGGGAACATGACGG+TGG + chr5_2:9146251-9146270 Msa0755390:intron 55.0%
CGGTTCCAAGGGTGAGAATG+GGG + chr5_2:9146373-9146392 Msa0755390:CDS 55.0%
TGAAGCCCCATTCTCACCCT+TGG - chr5_2:9146381-9146400 None:intergenic 55.0%
AAGTTTCTCGGCAACGCTGG+TGG + chr5_2:9146419-9146438 Msa0755390:CDS 55.0%
AGGAAGGAGAAGGGTAGCGA+AGG - chr5_2:9146611-9146630 None:intergenic 55.0%
TGGCCCCACATAGGATATGC+AGG - chr5_2:9147351-9147370 None:intergenic 55.0%
!! GTACCGATTTGGAGTCCTCC+GGG + chr5_2:9147393-9147412 Msa0755390:CDS 55.0%
GTCCTCCGGGTTATCCTCTA+TGG + chr5_2:9147406-9147425 Msa0755390:CDS 55.0%
TGCCATAGAGGATAACCCGG+AGG - chr5_2:9147411-9147430 None:intergenic 55.0%
GGCTGCCATAGAGGATAACC+CGG - chr5_2:9147414-9147433 None:intergenic 55.0%
CATTGGAAGCCATATCCGCC+AGG + chr5_2:9147447-9147466 Msa0755390:CDS 55.0%
TTGGAAGCCATATCCGCCAG+GGG + chr5_2:9147449-9147468 Msa0755390:CDS 55.0%
CAGGTGCATGTGGATGCATG+GGG + chr5_2:9147599-9147618 Msa0755390:intron 55.0%
GGTGGACAAGGCTGTAAAGG+AGG + chr5_2:9148464-9148483 Msa0755390:CDS 55.0%
!! TTACTGTGGATGGTGGTGGG+TGG + chr5_2:9148658-9148677 Msa0755390:three_prime_UTR 55.0%
! CTGGTTGGTTGGAGCCTAAG+AGG - chr5_2:9148766-9148785 None:intergenic 55.0%
CGTGTTATGGTAGGGACCAC+AGG - chr5_2:9148828-9148847 None:intergenic 55.0%
GCAACTCAGATGGACGCACG+AGG - chr5_2:9145222-9145241 None:intergenic 60.0%
CGTGCGTCCATCTGAGTTGC+AGG + chr5_2:9145222-9145241 Msa0755390:intron 60.0%
! CTTCCGTGTTGGCCCCACAT+AGG - chr5_2:9147360-9147379 None:intergenic 60.0%
GATGCAGGCAGAGGAAGTGG+TGG + chr5_2:9148446-9148465 Msa0755390:intron 60.0%
!! GGCAGAGGAAGTGGTGGACA+AGG + chr5_2:9148452-9148471 Msa0755390:intron 60.0%
!! CTGTGGATGGTGGTGGGTGG+TGG + chr5_2:9148661-9148680 Msa0755390:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9143051 9149395 9143051 ID=Msa0755390;Name=Msa0755390
chr5_2 mRNA 9143051 9149395 9143051 ID=Msa0755390-mRNA-1;Parent=Msa0755390;Name=Msa0755390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=314|0.83|0.76|1|0.75|0.61|13|781|494
chr5_2 exon 9143051 9143293 9143051 ID=Msa0755390-mRNA-1:exon:4225;Parent=Msa0755390-mRNA-1
chr5_2 exon 9143841 9144041 9143841 ID=Msa0755390-mRNA-1:exon:4226;Parent=Msa0755390-mRNA-1
chr5_2 exon 9144721 9144800 9144721 ID=Msa0755390-mRNA-1:exon:4227;Parent=Msa0755390-mRNA-1
chr5_2 exon 9145244 9145310 9145244 ID=Msa0755390-mRNA-1:exon:4228;Parent=Msa0755390-mRNA-1
chr5_2 exon 9145553 9145599 9145553 ID=Msa0755390-mRNA-1:exon:4229;Parent=Msa0755390-mRNA-1
chr5_2 exon 9145818 9145895 9145818 ID=Msa0755390-mRNA-1:exon:4230;Parent=Msa0755390-mRNA-1
chr5_2 exon 9145978 9146198 9145978 ID=Msa0755390-mRNA-1:exon:4231;Parent=Msa0755390-mRNA-1
chr5_2 exon 9146322 9146514 9146322 ID=Msa0755390-mRNA-1:exon:4232;Parent=Msa0755390-mRNA-1
chr5_2 exon 9146943 9147083 9146943 ID=Msa0755390-mRNA-1:exon:4233;Parent=Msa0755390-mRNA-1
chr5_2 exon 9147222 9147470 9147222 ID=Msa0755390-mRNA-1:exon:4234;Parent=Msa0755390-mRNA-1
chr5_2 exon 9147602 9147670 9147602 ID=Msa0755390-mRNA-1:exon:4235;Parent=Msa0755390-mRNA-1
chr5_2 exon 9148019 9148066 9148019 ID=Msa0755390-mRNA-1:exon:4236;Parent=Msa0755390-mRNA-1
chr5_2 exon 9148453 9149395 9148453 ID=Msa0755390-mRNA-1:exon:4237;Parent=Msa0755390-mRNA-1
chr5_2 five_prime_UTR 9143051 9143293 9143051 ID=Msa0755390-mRNA-1:five_prime_utr;Parent=Msa0755390-mRNA-1
chr5_2 five_prime_UTR 9143841 9143911 9143841 ID=Msa0755390-mRNA-1:five_prime_utr;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9143912 9144041 9143912 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9144721 9144800 9144721 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9145244 9145310 9145244 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9145553 9145599 9145553 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9145818 9145895 9145818 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9145978 9146198 9145978 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9146322 9146514 9146322 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9146943 9147083 9146943 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9147222 9147470 9147222 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9147602 9147670 9147602 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9148019 9148066 9148019 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 CDS 9148453 9148614 9148453 ID=Msa0755390-mRNA-1:cds;Parent=Msa0755390-mRNA-1
chr5_2 three_prime_UTR 9148615 9149395 9148615 ID=Msa0755390-mRNA-1:three_prime_utr;Parent=Msa0755390-mRNA-1
Gene Sequence

>Msa0755390

ATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTCCCAAAAGGACTTAGGGTTCTTCTCCTTGAAGGAGACAACAATTCTGCTTCTGAAATAAGAACAAAGCTTGAATCTATGGACTATAATGTTTCTACGTTCTACAATGAGAATGAAGCCTTGTCAGCAATCTCAAGTAGTCCCAAATGCTTCCATGTTGCCATAGTGGAGGTGAGTATAAGCTGCCCTGATGGAGGTTTCAAATTTCTCGAGAATGCGAAGGACTTGCCAACTATTATGACTTCGAATAGTCAGTGCATAAACACAATGATGAAGTGCATTGCGCTTGGTGCAGTTGAGTTCCTCACTAAACCACTTTCTGAGGACAAGCTGAAAAATATTTGGCAGCATGTTGTTCACAAGGCATTCAATGCCGAGGCAAGCGCTCTGTCTGAATCGCTTAAACCGGTCAAAGAATCTGTAGAGTCCATGTTGCAGCTCCAAACAGACAACGCACTACATGAAAGTACAATATCAATAGATTTAGATAAGGTGTCCAAGTTTAGTGATAATGAACATGAGAATTCGACGGCAAGCGATAAATATCCGGCTCCTTCGACTCCTCAATTAAAACAAGGGGCAAGTTCTCCTCAACCTACGAAACCTCTGATTAAGGCGGAAGAAGATTTTGCCAACGGTTCCAAGGGTGAGAATGGGGCTTCATTGAATCCACAGAATAAAAAGTTTCTCGGCAACGCTGGTGGTAATACATCTCCAAATAAAACACGTGCTGTTAACGATCCATGTGAGAATAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACCGCTGAGCTGCACAAAAAATTTGTGAAGGCAGTGGAACATCTAGGTATTGATCAAGCCATTCCTTCTCGTATATTGGAGTTAATGAAAGTCGACGGTTTGACAAGGCATAATGTGGCAAGCCATCTTCAGATCATCCACACGGACGAAGATCGAAAATGGCCAAATCGAAGAGATCCTATGCAAAGGAACTATTGTATGCAAAGACCGATTATGGCCTATCCACCATATCATTCTAATCACACCTTTCCTCCAGCTCCTGCATATCCTATGTGGGGCCAACACGGAAGTCAAACAGCTGGTGTACCGATTTGGAGTCCTCCGGGTTATCCTCTATGGCAGCCTACAGAAAGTTGGCATTGGAAGCCATATCCGCCAGGGGTGCATGTGGATGCATGGGGTAACCCAATGTTGCCTCCACCTCAAACTCACTGTATCCCTTACACTCAAAATATGGCTGGGATGCACAACGCTAAAGCAGTGGATTATAGTTATCCGGCAGAGGAAGTGGTGGACAAGGCTGTAAAGGAGGCAATAAACAAGCCATGGCTACCTTTACCTATAGGCCTCAAACCTCCTTCAATGGATAGTGTGTTGGATGAACTTTCTAAACAAGGCATTCCTTTTAGCAAGAAGAGCAAGGGCTCTAGACCATGCTGA
Protein sequence

>Msa0755390

MVCTANDLQGWKDFPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSISCPDGGFKFLENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQHVVHKAFNAEASALSESLKPVKESVESMLQLQTDNALHESTISIDLDKVSKFSDNEHENSTASDKYPAPSTPQLKQGASSPQPTKPLIKAEEDFANGSKGENGASLNPQNKKFLGNAGGNTSPNKTRAVNDPCENKANRKKMKVDWTAELHKKFVKAVEHLGIDQAIPSRILELMKVDGLTRHNVASHLQIIHTDEDRKWPNRRDPMQRNYCMQRPIMAYPPYHSNHTFPPAPAYPMWGQHGSQTAGVPIWSPPGYPLWQPTESWHWKPYPPGVHVDAWGNPMLPPPQTHCIPYTQNMAGMHNAKAVDYSYPAEEVVDKAVKEAINKPWLPLPIGLKPPSMDSVLDELSKQGIPFSKKSKGSRPC*