AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755300 MtrunA17_Chr5g0400241 88.029 543 16 2 1 494 1 543 0.0 965
Msa0755300 MtrunA17_Chr4g0054981 62.591 548 133 9 1 482 1 542 0.0 628
Msa0755300 MtrunA17_Chr2g0324891 33.209 268 126 8 264 483 155 417 2.83e-34 133
Msa0755300 MtrunA17_Chr1g0161431 31.329 316 142 8 8 319 5 249 2.32e-31 127
Msa0755300 MtrunA17_Chr4g0040481 33.460 263 126 7 267 482 155 415 9.28e-31 123
Msa0755300 MtrunA17_Chr4g0074421 41.837 98 57 0 223 320 86 183 2.34e-16 77.4
Msa0755300 MtrunA17_Chr4g0074401 37.405 131 78 2 12 139 15 144 9.64e-16 80.1
Msa0755300 MtrunA17_Chr4g0074401 33.523 176 92 9 265 415 198 373 1.27e-13 73.2
Msa0755300 MtrunA17_Chr4g0074411 37.209 129 77 2 14 139 18 145 9.82e-16 80.1
Msa0755300 MtrunA17_Chr4g0074411 59.259 54 22 0 266 319 197 250 2.76e-12 68.9
Msa0755300 MtrunA17_Chr4g0067981 36.364 132 80 2 9 137 26 156 3.62e-15 78.2
Msa0755300 MtrunA17_Chr4g0067981 66.667 51 17 0 269 319 214 264 2.71e-14 75.5
Msa0755300 MtrunA17_Chr3g0134481 36.306 157 90 5 14 166 8 158 8.99e-15 72.8
Msa0755300 MtrunA17_Chr3g0134481 36.765 68 43 0 252 319 114 181 7.08e-11 61.6
Msa0755300 MtrunA17_Chr3g0123131 36.220 127 75 3 12 134 11 135 1.58e-14 76.3
Msa0755300 MtrunA17_Chr3g0123131 37.500 104 58 2 221 319 147 248 6.85e-11 64.7
Msa0755300 MtrunA17_Chr2g0294911 34.211 152 89 4 14 156 29 178 2.43e-14 75.5
Msa0755300 MtrunA17_Chr2g0294911 56.863 51 22 0 269 319 210 260 5.47e-12 68.2
Msa0755300 MtrunA17_Chr3g0134461 33.065 124 80 1 14 134 8 131 2.59e-14 71.6
Msa0755300 MtrunA17_Chr3g0134461 52.542 59 28 0 263 321 136 194 4.09e-12 65.1
Msa0755300 MtrunA17_Chr7g0255711 62.745 51 19 0 269 319 90 140 8.57e-14 72.0
Msa0755300 MtrunA17_Chr2g0304841 61.111 54 21 0 266 319 209 262 8.77e-14 73.9
Msa0755300 MtrunA17_Chr2g0304841 38.095 126 70 5 14 134 18 140 1.69e-13 73.2
Msa0755300 MtrunA17_Chr3g0137101 37.600 125 72 3 14 134 8 130 9.98e-14 73.6
Msa0755300 MtrunA17_Chr3g0137101 56.140 57 25 0 263 319 191 247 1.21e-13 73.6
Msa0755300 MtrunA17_Chr8g0376881 36.000 125 74 3 14 134 25 147 1.18e-13 73.2
Msa0755300 MtrunA17_Chr8g0376881 60.784 51 20 0 269 319 208 258 3.54e-11 65.5
Msa0755300 MtrunA17_Chr6g0471041 35.385 130 79 3 12 137 12 140 8.84e-13 70.1
Msa0755300 MtrunA17_Chr4g0031961 58.824 51 21 0 269 319 130 180 9.55e-13 68.9
Msa0755300 MtrunA17_Chr1g0149841 59.615 52 21 0 268 319 189 240 1.28e-12 70.1
Msa0755300 MtrunA17_Chr1g0149841 34.677 124 77 2 14 134 5 127 1.04e-11 67.0
Msa0755300 MtrunA17_Chr4g0061021 29.134 127 84 3 10 131 26 151 3.31e-12 68.9
Msa0755300 MtrunA17_Chr3g0127941 29.167 144 93 4 8 143 44 186 5.72e-12 68.2
Msa0755300 MtrunA17_Chr1g0149851 35.200 125 75 3 14 134 5 127 1.62e-11 66.6
Msa0755300 MtrunA17_Chr3g0091641 29.134 127 84 3 10 131 17 142 2.17e-11 66.2
Msa0755300 MtrunA17_Chr7g0276361 32.258 124 75 3 15 131 11 132 2.25e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755300 AT4G18020.3 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755300 AT4G18020.2 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755300 AT4G18020.1 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755300 AT4G18020.6 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755300 AT4G18020.9 45.796 559 185 16 1 482 1 518 2.88e-118 358
Msa0755300 AT4G18020.8 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT4G18020.11 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT4G18020.4 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT4G18020.5 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT4G18020.10 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT4G18020.7 44.980 498 164 15 1 429 1 457 1.05e-110 337
Msa0755300 AT5G44190.1 36.508 252 106 9 268 482 145 379 2.31e-20 93.2
Msa0755300 AT2G20570.1 33.455 275 126 10 259 482 142 410 4.44e-19 89.7
Msa0755300 AT5G44190.2 75.000 52 13 0 268 319 145 196 5.12e-18 85.9
Msa0755300 AT2G20570.2 33.462 260 122 9 271 482 170 426 3.66e-17 84.3
Msa0755300 AT3G16857.1 37.097 124 74 2 14 134 33 155 4.32e-15 78.6
Msa0755300 AT3G16857.1 57.377 61 26 0 259 319 226 286 1.38e-14 77.0
Msa0755300 AT3G16857.2 37.097 124 74 2 14 134 33 155 4.46e-15 78.6
Msa0755300 AT3G16857.2 57.377 61 26 0 259 319 226 286 1.39e-14 77.0
Msa0755300 AT5G58080.1 57.895 57 24 0 263 319 187 243 4.64e-15 78.2
Msa0755300 AT5G58080.1 33.333 132 85 2 14 143 14 144 3.11e-12 69.3
Msa0755300 AT2G01760.3 64.815 54 19 0 266 319 131 184 6.31e-15 76.3
Msa0755300 AT3G16857.3 57.377 61 26 0 259 319 156 216 1.02e-14 77.4
Msa0755300 AT2G25180.1 34.328 134 84 2 7 137 6 138 1.17e-14 77.0
Msa0755300 AT2G25180.1 63.462 52 19 0 268 319 193 244 3.34e-13 72.4
Msa0755300 AT2G01760.1 64.815 54 19 0 266 319 196 249 1.41e-14 75.9
Msa0755300 AT2G01760.1 31.200 125 81 2 14 134 7 130 1.11e-11 67.0
Msa0755300 AT2G01760.2 64.815 54 19 0 266 319 224 277 1.95e-14 75.5
Msa0755300 AT3G10760.1 62.745 51 19 0 269 319 104 154 3.21e-14 74.3
Msa0755300 AT5G05090.1 62.745 51 19 0 269 319 80 130 4.33e-14 72.8
Msa0755300 AT4G31920.1 63.462 52 19 0 268 319 181 232 6.78e-14 74.3
Msa0755300 AT4G31920.1 36.885 122 73 2 14 132 13 133 8.83e-14 74.3
Msa0755300 AT5G24470.1 32.576 132 80 4 8 131 38 168 1.41e-13 73.6
Msa0755300 AT2G40970.1 60.784 51 20 0 269 319 104 154 4.18e-13 69.7
Msa0755300 AT5G59570.2 58.824 51 21 0 269 319 140 190 4.18e-13 70.5
Msa0755300 AT5G59570.1 58.824 51 21 0 269 319 140 190 4.18e-13 70.5
Msa0755300 AT3G46640.2 58.824 51 21 0 269 319 143 193 5.98e-13 70.1
Msa0755300 AT3G46640.1 58.824 51 21 0 269 319 143 193 5.98e-13 70.1
Msa0755300 AT3G46640.3 58.824 51 21 0 269 319 143 193 9.35e-13 69.7
Msa0755300 AT1G67710.1 34.127 126 79 2 15 137 8 132 3.65e-12 68.9
Msa0755300 AT5G49240.1 53.846 52 24 0 269 320 222 273 4.48e-12 67.4
Msa0755300 AT5G60100.2 31.405 121 78 3 16 131 62 182 8.21e-12 67.8
Msa0755300 AT5G60100.7 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755300 AT5G60100.6 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755300 AT5G60100.4 31.405 121 78 3 16 131 62 182 8.55e-12 67.4
Msa0755300 AT5G60100.5 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755300 AT5G60100.3 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755300 AT5G60100.1 31.405 121 78 3 16 131 62 182 9.53e-12 67.8
Msa0755300 AT5G61380.1 27.612 134 89 4 3 131 7 137 1.30e-11 67.4
Msa0755300 AT5G07210.2 54.902 51 23 0 269 319 221 271 1.86e-11 67.0
Msa0755300 AT5G07210.1 54.902 51 23 0 269 319 229 279 1.86e-11 67.0

Find 205 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGCTCTTCTTGCTAAA+AGG 0.234968 5_2:+9074283 None:intergenic
AGCCATTCCTTCTCGTATAT+TGG 0.261203 5_2:-9075851 Msa0755300:CDS
AAGATTACCCCTGGCGGATA+TGG 0.263394 5_2:+9075403 None:intergenic
AGAAGAACCCTAAGTCCTTT+TGG 0.287836 5_2:+9078905 None:intergenic
AAGAGCTAAAATAATGAAAT+TGG 0.290639 5_2:+9073606 None:intergenic
TCTGCTTTGGTGATTTGATA+TGG 0.291574 5_2:+9073477 None:intergenic
AAGAACAAAGCTTGAATCTA+TGG 0.296938 5_2:-9078849 Msa0755300:CDS
TTGTATGCAAAGACCGATTA+TGG 0.298780 5_2:-9075575 Msa0755300:CDS
TACCTTGGCTGAAAAGAAAA+TGG 0.312284 5_2:+9079585 None:intergenic
TGTGTTAGTGTGGTTGGATA+GGG 0.314608 5_2:-9073757 Msa0755300:three_prime_UTR
CGGACACCTTATGTAGCTTC+TGG 0.340099 5_2:-9074013 Msa0755300:three_prime_UTR
AATTTGTATTGGTGAAGTTT+TGG 0.341698 5_2:+9079614 None:intergenic
CTTGAATCTATGGACTATAA+TGG 0.346894 5_2:-9078839 Msa0755300:intron
TGCTGACTTACTTGAGTGTA+AGG 0.351117 5_2:+9075200 None:intergenic
CTTAATCTAATCTACCATTC+TGG 0.351819 5_2:+9074077 None:intergenic
TTGTGTTAGTGTGGTTGGAT+AGG 0.353896 5_2:-9073758 Msa0755300:three_prime_UTR
ACACGGACGAAGATCGAAAA+TGG 0.354454 5_2:-9075630 Msa0755300:CDS
TGCATAGGATCTCTTCGATT+TGG 0.358006 5_2:+9075607 None:intergenic
ACCTACGAAACCTCTGATTA+AGG 0.360688 5_2:-9076528 Msa0755300:CDS
CTGTGGATGGTGGTGGGTGG+TGG 0.368315 5_2:-9074198 Msa0755300:three_prime_UTR
CATGTAGTGCGTTGTCTGTT+TGG 0.369087 5_2:+9076804 None:intergenic
CTTGTTGTTCATGACTCAAA+TGG 0.369721 5_2:-9074244 Msa0755300:three_prime_UTR
GTCCTCCGGGTTATCCTCTA+TGG 0.370689 5_2:-9075453 Msa0755300:CDS
AAACAGCTGGTGTACCGATT+TGG 0.372797 5_2:-9075477 Msa0755300:CDS
CATTATTAGATAACTCTACT+AGG 0.376355 5_2:+9073732 None:intergenic
AAGATTTCCCAAAAGGACTT+AGG 0.377585 5_2:-9078913 Msa0755300:CDS
TTTCCATCCTTGTAAATCAT+TGG 0.382036 5_2:+9078934 None:intergenic
TTGTGTAGAGGACTAGAAAA+AGG 0.382257 5_2:-9078984 Msa0755300:five_prime_UTR
TAATGTGGCAAGCCATCTTC+AGG 0.386166 5_2:-9075797 Msa0755300:intron
TATCTAATAATGGAAAGTTT+AGG 0.393877 5_2:-9073721 Msa0755300:three_prime_UTR
TATGGCAACATGGAAGCATT+TGG 0.394078 5_2:+9078087 None:intergenic
CAGAATTGTTGTCTCCTTCA+AGG 0.400600 5_2:+9078882 None:intergenic
TACATAAGGTGTCCGTGTTA+TGG 0.406359 5_2:+9074021 None:intergenic
AACGGTTCCAAGGGTGAGAA+TGG 0.408917 5_2:-9076488 Msa0755300:CDS
GAAGGAGGTTTGAGGCCTAT+AGG 0.414096 5_2:+9074346 None:intergenic
CTTAGGGTTCTTCTCCTTGA+AGG 0.421200 5_2:-9078896 Msa0755300:CDS
AGTGCAAACCATAGCTGGTT+TGG 0.423236 5_2:+9078958 None:intergenic
CTAGTAGAGTTATCTAATAA+TGG 0.427589 5_2:-9073731 Msa0755300:three_prime_UTR
AATCTACCATTCTGGTTGGT+TGG 0.427665 5_2:+9074085 None:intergenic
TGATTGATGAGTCCAGTCTT+TGG 0.430716 5_2:-9073653 Msa0755300:three_prime_UTR
AGCTCCTGCATATCCTATGT+GGG 0.434588 5_2:-9075515 Msa0755300:CDS
AGTTAGTATCCGCCAAAGAC+TGG 0.435785 5_2:+9073641 None:intergenic
AATGGTAGATTAGATTAAGT+TGG 0.437487 5_2:-9074073 Msa0755300:three_prime_UTR
GTTGTGTACTTACTAATAGT+TGG 0.439441 5_2:+9077558 None:intergenic
ATCAGAGGTTTCGTAGGTTG+AGG 0.442825 5_2:+9076533 None:intergenic
ATGGCAACATGGAAGCATTT+GGG 0.445028 5_2:+9078088 None:intergenic
GACTCTACAGATTCTTTGAC+CGG 0.446068 5_2:+9076839 None:intergenic
TAGGTACAAACTTCAATTGA+TGG 0.446180 5_2:+9073787 None:intergenic
ATCAAACTGCAGAATATGGC+TGG 0.446826 5_2:-9074852 Msa0755300:intron
AGATTTCCCAAAAGGACTTA+GGG 0.447765 5_2:-9078912 Msa0755300:CDS
ATGGTAGATTAGATTAAGTT+GGG 0.449486 5_2:-9074072 Msa0755300:three_prime_UTR
CCATGGCTACCTTTACCTAT+AGG 0.454703 5_2:-9074361 Msa0755300:CDS
CGTGTTATGGTAGGGACCAC+AGG 0.454839 5_2:+9074034 None:intergenic
CCACAGTAACTAGCACTGTT+TGG 0.455077 5_2:+9074215 None:intergenic
AGAAATTTGAAACCTCCATC+AGG 0.457896 5_2:+9077600 None:intergenic
CTAGTTACTGTGGATGGTGG+TGG 0.462595 5_2:-9074205 Msa0755300:three_prime_UTR
ACGGTTCCAAGGGTGAGAAT+GGG 0.464644 5_2:-9076487 Msa0755300:CDS
GGTAAAGTGCAGCGCGTTGA+AGG 0.465837 5_2:+9079694 None:intergenic
ACAATGATGCATGCAACAAA+TGG 0.466128 5_2:-9073980 Msa0755300:three_prime_UTR
TTCAGGTGCATGTGGATGCA+TGG 0.466852 5_2:-9075262 Msa0755300:intron
TGTACCGATTTGGAGTCCTC+CGG 0.467682 5_2:-9075467 Msa0755300:CDS
CAGCTCCTGCATATCCTATG+TGG 0.469307 5_2:-9075516 Msa0755300:CDS
TTTGAGGTGGAGGCAACATT+GGG 0.470593 5_2:+9075234 None:intergenic
CGATTAGCTTTATTCTCACA+TGG 0.470968 5_2:+9076380 None:intergenic
ATGCATGGGCCAATGCCATA+TGG 0.471531 5_2:-9074153 Msa0755300:three_prime_UTR
TTGGCAGTGCAAACCATAGC+TGG 0.472215 5_2:+9078953 None:intergenic
AATGGCCCACGAATTTGTAT+TGG 0.472547 5_2:+9079603 None:intergenic
TAAGGGATACAGTGAGTTTG+AGG 0.473363 5_2:+9075218 None:intergenic
GATTATTACAACAGTCCATA+TGG 0.473847 5_2:+9074138 None:intergenic
ACAAAATAATTACCTGAAGA+TGG 0.478335 5_2:+9075785 None:intergenic
AGGCCTCAAACCTCCTTCAA+TGG 0.480176 5_2:-9074341 Msa0755300:CDS
CATGTGAGAATAAAGCTAAT+CGG 0.480529 5_2:-9076379 Msa0755300:CDS
AAAGTTCATTACCTCCACTA+TGG 0.481628 5_2:+9078069 None:intergenic
AGCAGTGGATTATAGTTATC+CGG 0.482719 5_2:-9074814 Msa0755300:intron
TAGTTACTGTGGATGGTGGT+GGG 0.483936 5_2:-9074204 Msa0755300:three_prime_UTR
TCAGGTGCATGTGGATGCAT+GGG 0.484304 5_2:-9075261 Msa0755300:intron
AAATAATGAAATTGGTAATG+AGG 0.484572 5_2:+9073614 None:intergenic
CACATAGGATATGCAGGAGC+TGG 0.488577 5_2:+9075517 None:intergenic
TTCAGCTTGTCCTCAGAAAG+TGG 0.491885 5_2:+9077014 None:intergenic
TATGGTGGATAGGCCATAAT+CGG 0.494071 5_2:+9075562 None:intergenic
TGAAGCCCCATTCTCACCCT+TGG 0.498280 5_2:+9076481 None:intergenic
ATGTTCATTATCACTAAACT+TGG 0.498521 5_2:+9076748 None:intergenic
ATTGATGCAGGCAGAGGAAG+TGG 0.499805 5_2:-9074416 Msa0755300:intron
TGTTAGTGTGGTTGGATAGG+GGG 0.501718 5_2:-9073755 Msa0755300:three_prime_UTR
AGTGGTGGACAAGGCTGTAA+AGG 0.501990 5_2:-9074398 Msa0755300:CDS
AATAATGAAATTGGTAATGA+GGG 0.502570 5_2:+9073615 None:intergenic
GGATGGAAAGATTTCCCAAA+AGG 0.504062 5_2:-9078920 Msa0755300:CDS
AATTGAGGAGTCGAAGGAGC+CGG 0.504982 5_2:+9076698 None:intergenic
GTTTGAGGTGGAGGCAACAT+TGG 0.505444 5_2:+9075233 None:intergenic
TTCAGACAGAGCGCTTGCCT+CGG 0.507470 5_2:+9076871 None:intergenic
GGTTTGAGGCCTATAGGTAA+AGG 0.507845 5_2:+9074352 None:intergenic
CTGGTTGGTTGGAGCCTAAG+AGG 0.509344 5_2:+9074096 None:intergenic
CAGCTGTTTGACTTCCGTGT+TGG 0.509674 5_2:+9075491 None:intergenic
TCTGTCTGAATCGCTTAAAC+CGG 0.513162 5_2:-9076858 Msa0755300:CDS
GTGAAGGCAGTGGAACATCT+AGG 0.515004 5_2:-9075883 Msa0755300:CDS
TACAACAGTCCATATGGCAT+TGG 0.515441 5_2:+9074144 None:intergenic
CTCCAATATACGAGAAGGAA+TGG 0.515998 5_2:+9075849 None:intergenic
GGACACCTTATGTAGCTTCT+GGG 0.516193 5_2:-9074012 Msa0755300:three_prime_UTR
TATCCATTGAAGGAGGTTTG+AGG 0.516912 5_2:+9074338 None:intergenic
CATTGGAAGCCATATCCGCC+AGG 0.517092 5_2:-9075412 Msa0755300:CDS
GGAAAGTTTAGGTAGGAAGT+AGG 0.518233 5_2:-9073710 Msa0755300:three_prime_UTR
ATGCTTCCATGTTGCCATAG+TGG 0.519336 5_2:-9078083 Msa0755300:CDS
GACGGCAAGCGATAAATATC+CGG 0.521710 5_2:-9076717 Msa0755300:CDS
AGCATGTAGTAACAATTATG+AGG 0.522586 5_2:-9073561 Msa0755300:three_prime_UTR
CATTTCCCAGAAGCTACATA+AGG 0.526573 5_2:+9074007 None:intergenic
AAAGGATGCCAAACCAGCTA+TGG 0.530919 5_2:-9078966 Msa0755300:exon
ATACAGTGAGTTTGAGGTGG+AGG 0.531317 5_2:+9075224 None:intergenic
TGCACTGCCAATGATTTACA+AGG 0.534699 5_2:-9078941 Msa0755300:CDS
TGGTGGACAGACAAACTTGC+TGG 0.535931 5_2:-9074181 Msa0755300:three_prime_UTR
GTGAGTATAAGCTGCCCTGA+TGG 0.537521 5_2:-9077615 Msa0755300:CDS
ATCTAATCTACCATTCTGGT+TGG 0.537652 5_2:+9074081 None:intergenic
GTGTTAGTGTGGTTGGATAG+GGG 0.538343 5_2:-9073756 Msa0755300:three_prime_UTR
CTTTCTGTAGGCTGCCATAG+AGG 0.540911 5_2:+9075439 None:intergenic
TAACCCGGAGGACTCCAAAT+CGG 0.541856 5_2:+9075463 None:intergenic
TATGGCAGCCTACAGAAAGT+TGG 0.542411 5_2:-9075435 Msa0755300:CDS
CTTCCGTGTTGGCCCCACAT+AGG 0.543505 5_2:+9075502 None:intergenic
CTCAATTAAAACAAGGGGCA+AGG 0.543629 5_2:-9076682 Msa0755300:intron
ATTCTCACCCTTGGAACCGT+TGG 0.545261 5_2:+9076490 None:intergenic
TGGCCCCACATAGGATATGC+AGG 0.545338 5_2:+9075511 None:intergenic
CAGTAACTAGCACTGTTTGG+TGG 0.546715 5_2:+9074218 None:intergenic
TCCAACACACTATCCATTGA+AGG 0.547337 5_2:+9074328 None:intergenic
GTACCGATTTGGAGTCCTCC+GGG 0.547442 5_2:-9075466 Msa0755300:CDS
GGCAGAGGAAGTGGTGGACA+AGG 0.548339 5_2:-9074407 Msa0755300:CDS
AAGGTGTGATTAGAATGATA+TGG 0.548662 5_2:+9075544 None:intergenic
TTGTTGTTCATGACTCAAAT+GGG 0.550319 5_2:-9074243 Msa0755300:three_prime_UTR
GCCTTAATCAGAGGTTTCGT+AGG 0.552358 5_2:+9076527 None:intergenic
TTGATGAGTCCAGTCTTTGG+CGG 0.552528 5_2:-9073650 Msa0755300:three_prime_UTR
TTCCAATGCCAACTTTCTGT+AGG 0.557441 5_2:+9075427 None:intergenic
ACTTGCTGGCAGACATGCAT+GGG 0.557989 5_2:-9074167 Msa0755300:three_prime_UTR
GCAGAAGAACAAGAACAGAT+TGG 0.561014 5_2:-9079022 Msa0755300:intron
TAAGGTGTCCGTGTTATGGT+AGG 0.567111 5_2:+9074025 None:intergenic
AGTAACTAGCACTGTTTGGT+GGG 0.568901 5_2:+9074219 None:intergenic
ATACAATAGTTCCTTTGCAT+AGG 0.572699 5_2:+9075592 None:intergenic
GGGATACAGTGAGTTTGAGG+TGG 0.573814 5_2:+9075221 None:intergenic
TCTTCTTCCGCCTTAATCAG+AGG 0.577092 5_2:+9076518 None:intergenic
TCCTTCAATGGATAGTGTGT+TGG 0.579357 5_2:-9074329 Msa0755300:CDS
CAAATTTCTCGAGAATGCGA+AGG 0.579566 5_2:-9077586 Msa0755300:CDS
AATATCAATAGATTTAGATA+AGG 0.579803 5_2:-9076774 Msa0755300:CDS
ACAAATGGAGATTACATACA+TGG 0.580116 5_2:-9073965 Msa0755300:three_prime_UTR
AGCCTACAGAAAGTTGGCAT+TGG 0.580116 5_2:-9075429 Msa0755300:CDS
GCTGACTTACTTGAGTGTAA+GGG 0.580632 5_2:+9075201 None:intergenic
TTACTGTGGATGGTGGTGGG+TGG 0.582014 5_2:-9074201 Msa0755300:three_prime_UTR
TAATAATGGAAAGTTTAGGT+AGG 0.582334 5_2:-9073717 Msa0755300:three_prime_UTR
GTCTGTTTGGAGCTGCAACA+TGG 0.584513 5_2:+9076817 None:intergenic
TAGGCTCCAACCAACCAGAA+TGG 0.584546 5_2:-9074091 Msa0755300:three_prime_UTR
ACTTCACCAATACAAATTCG+TGG 0.586725 5_2:-9079609 Msa0755300:five_prime_UTR
CTGCCAATGATTTACAAGGA+TGG 0.587055 5_2:-9078937 Msa0755300:CDS
TCGACTCCTCAATTAAAACA+AGG 0.587700 5_2:-9076689 Msa0755300:CDS
ATTAACTCCAATATACGAGA+AGG 0.590177 5_2:+9075844 None:intergenic
GTAAAGTGCAGCGCGTTGAA+GGG 0.590995 5_2:+9079695 None:intergenic
TGGTTGGTTGGAGCCTAAGA+GGG 0.591259 5_2:+9074097 None:intergenic
TTGGCAGCATGTTGTTCACA+AGG 0.591380 5_2:-9076985 Msa0755300:intron
TCAAACTGCAGAATATGGCT+GGG 0.595527 5_2:-9074851 Msa0755300:intron
TGATCTGCTTACTTGTGTAG+AGG 0.596929 5_2:-9078996 Msa0755300:five_prime_UTR
CGGTTTGACAAGGCATAATG+TGG 0.597828 5_2:-9075812 Msa0755300:CDS
CCTATAGGTAAAGGTAGCCA+TGG 0.598962 5_2:+9074361 None:intergenic
CGGTTCCAAGGGTGAGAATG+GGG 0.600958 5_2:-9076486 Msa0755300:CDS
ACTACTTGAGATTGCTGACA+AGG 0.601057 5_2:+9078111 None:intergenic
AACTTGCTGGCAGACATGCA+TGG 0.602656 5_2:-9074168 Msa0755300:three_prime_UTR
TTGGAGTTAATGAAAGTCGA+CGG 0.603528 5_2:-9075832 Msa0755300:CDS
AGGAGGCAATAAACAAGCCA+TGG 0.604570 5_2:-9074378 Msa0755300:CDS
AAGTTTCTCGGCAACGCTGG+TGG 0.606145 5_2:-9076440 Msa0755300:CDS
AGTATAAGCTGCCCTGATGG+AGG 0.607969 5_2:-9077612 Msa0755300:CDS
ATTAGAATGATATGGTGGAT+AGG 0.608161 5_2:+9075552 None:intergenic
ATCGAAGAGATCCTATGCAA+AGG 0.609454 5_2:-9075603 Msa0755300:CDS
ATATGCAGGAGCTGGAGGAA+AGG 0.610602 5_2:+9075525 None:intergenic
CCTCACTAAACCACTTTCTG+AGG 0.611321 5_2:-9077024 Msa0755300:CDS
CCAAACAGTGCTAGTTACTG+TGG 0.612138 5_2:-9074215 Msa0755300:three_prime_UTR
AAGGTGTCCGTGTTATGGTA+GGG 0.612805 5_2:+9074026 None:intergenic
CGACTCCTCAATTAAAACAA+GGG 0.616068 5_2:-9076688 Msa0755300:CDS
GTGTTATGGTAGGGACCACA+GGG 0.616784 5_2:+9074035 None:intergenic
ATTGGAAGCCATATCCGCCA+GGG 0.619064 5_2:-9075411 Msa0755300:CDS
GCTCCTGCATATCCTATGTG+GGG 0.621371 5_2:-9075514 Msa0755300:CDS
TTGGATGAACTTTCTAAACA+AGG 0.621400 5_2:-9074310 Msa0755300:CDS
GGCTGCCATAGAGGATAACC+CGG 0.621410 5_2:+9075448 None:intergenic
CCTCAGAAAGTGGTTTAGTG+AGG 0.621536 5_2:+9077024 None:intergenic
CAACACGGAAGTCAAACAGC+TGG 0.623780 5_2:-9075490 Msa0755300:CDS
GGTGGACAAGGCTGTAAAGG+AGG 0.624645 5_2:-9074395 Msa0755300:CDS
CACAATGATGAAGTGCATTG+CGG 0.626806 5_2:-9077281 Msa0755300:intron
ATAGGATATGCAGGAGCTGG+AGG 0.633192 5_2:+9075520 None:intergenic
TGAAAGTCGACGGTTTGACA+AGG 0.634861 5_2:-9075822 Msa0755300:CDS
TATCCTATGTGGGGCCAACA+CGG 0.635664 5_2:-9075505 Msa0755300:CDS
CTTCACCAATACAAATTCGT+GGG 0.636999 5_2:-9079608 Msa0755300:five_prime_UTR
GAAATTTGAAACCTCCATCA+GGG 0.638403 5_2:+9077601 None:intergenic
GCTTCAATTCAACAAATGTG+TGG 0.639298 5_2:+9073877 None:intergenic
CAATCAGGCATTCAATGCCG+AGG 0.641798 5_2:-9076888 Msa0755300:intron
TCATGAACAACAAGTCAGCA+TGG 0.646375 5_2:+9074253 None:intergenic
GATGCACAACGCTAAAGCAG+TGG 0.647084 5_2:-9074829 Msa0755300:CDS
GACTCCTCAATTAAAACAAG+GGG 0.647576 5_2:-9076687 Msa0755300:CDS
AACACACTATCCATTGAAGG+AGG 0.656403 5_2:+9074331 None:intergenic
ACAGTGCTAGTTACTGTGGA+TGG 0.657988 5_2:-9074211 Msa0755300:three_prime_UTR
AGACAAATCGAAGAAAACAA+AGG 0.658823 5_2:+9073534 None:intergenic
TAATGAACATGAGAATTCGA+CGG 0.659183 5_2:-9076735 Msa0755300:CDS
GTGTGATTAGAATGATATGG+TGG 0.660247 5_2:+9075547 None:intergenic
CTGTGGTCCCTACCATAACA+CGG 0.660405 5_2:-9074033 Msa0755300:three_prime_UTR
GATGCAGGCAGAGGAAGTGG+TGG 0.661975 5_2:-9074413 Msa0755300:intron
CTTCCATGTTGCCATAGTGG+AGG 0.668416 5_2:-9078080 Msa0755300:intron
TTACCTCCACTATGGCAACA+TGG 0.672571 5_2:+9078077 None:intergenic
TACGAAACCTCTGATTAAGG+CGG 0.686443 5_2:-9076525 Msa0755300:CDS
CAGGTGCATGTGGATGCATG+GGG 0.691891 5_2:-9075260 Msa0755300:CDS
CAAGAGACAGATCATCCACA+CGG 0.695941 5_2:-9075647 Msa0755300:intron
TTGGAAGCCATATCCGCCAG+GGG 0.704021 5_2:-9075410 Msa0755300:intron
GTGCTAGTTACTGTGGATGG+TGG 0.720596 5_2:-9074208 Msa0755300:three_prime_UTR
TGCCATAGAGGATAACCCGG+AGG 0.746099 5_2:+9075451 None:intergenic
TGTTATGGTAGGGACCACAG+GGG 0.833590 5_2:+9074036 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAGATAAAATTAAACTA+AGG + chr5_2:9075039-9075058 None:intergenic 10.0%
!!! TTTTCTAATTCAATATTTTA+TGG - chr5_2:9076119-9076138 Msa0755300:intron 10.0%
!! AAATAAAAATGACATATATA+TGG - chr5_2:9077571-9077590 Msa0755300:CDS 10.0%
!! ATAAAAAACTGTACTTTAAT+TGG + chr5_2:9074033-9074052 None:intergenic 15.0%
!! AAAAATTAACTTTATTCACA+TGG + chr5_2:9074131-9074150 None:intergenic 15.0%
!! TGTTTAAAAAAAATGAAAAG+TGG - chr5_2:9074822-9074841 Msa0755300:CDS 15.0%
!!! GTTTAATTTTATCTTTATTG+TGG - chr5_2:9075041-9075060 Msa0755300:intron 15.0%
!! AAGCAAAAAATAAACTAAAA+AGG - chr5_2:9075302-9075321 Msa0755300:intron 15.0%
!! TAATTAAAATGATGTGAATA+TGG - chr5_2:9075341-9075360 Msa0755300:intron 15.0%
!! ATTTACTATGAACATTATAT+AGG - chr5_2:9076352-9076371 Msa0755300:intron 15.0%
!! AATATCAATAGATTTAGATA+AGG - chr5_2:9076520-9076539 Msa0755300:CDS 15.0%
!!! TAGAACATCATATATTTTTT+TGG - chr5_2:9077292-9077311 Msa0755300:CDS 15.0%
!! ATATCTAATCAAAATTACTT+TGG + chr5_2:9078418-9078437 None:intergenic 15.0%
!! TATTGTAAAATTGATACAAT+TGG - chr5_2:9078662-9078681 Msa0755300:intron 15.0%
!!! TTAATTAATTTGTGATCTCA+TGG - chr5_2:9074244-9074263 Msa0755300:three_prime_UTR 20.0%
!! TTATTCTATTTATGTGCATT+TGG - chr5_2:9074913-9074932 Msa0755300:intron 20.0%
!! AGATAAAATTAAACTAAGGT+TGG + chr5_2:9075035-9075054 None:intergenic 20.0%
!! AGTATATATCTTATATTGTC+GGG + chr5_2:9075577-9075596 None:intergenic 20.0%
!! CAGTATATATCTTATATTGT+CGG + chr5_2:9075578-9075597 None:intergenic 20.0%
!! ATATAAGTGACAGTTAAAAT+TGG + chr5_2:9075873-9075892 None:intergenic 20.0%
!! AAAATATATGATGTTCTAAC+CGG + chr5_2:9077290-9077309 None:intergenic 20.0%
!!! TATGAAATAACTGATTTTTC+AGG - chr5_2:9078015-9078034 Msa0755300:intron 20.0%
!! AAAATGACTTGAATTTAAAC+AGG - chr5_2:9078347-9078366 Msa0755300:intron 20.0%
!! AAATGACTTGAATTTAAACA+GGG - chr5_2:9078348-9078367 Msa0755300:intron 20.0%
!!! TATACTATTAATCAAGTTGA+AGG + chr5_2:9078531-9078550 None:intergenic 20.0%
!! AGTAACAATTGTAACATTAA+CGG - chr5_2:9078628-9078647 Msa0755300:intron 20.0%
!!! TATCTAATAATGGAAAGTTT+AGG - chr5_2:9079573-9079592 Msa0755300:intron 20.0%
!!! AATAATGAAATTGGTAATGA+GGG + chr5_2:9079682-9079701 None:intergenic 20.0%
!!! AAATAATGAAATTGGTAATG+AGG + chr5_2:9079683-9079702 None:intergenic 20.0%
!! AAGAGCTAAAATAATGAAAT+TGG + chr5_2:9079691-9079710 None:intergenic 20.0%
!!! TTTTTTTCTGCATATGTTTG+TGG - chr5_2:9073514-9073533 Msa0755300:three_prime_UTR 25.0%
!!! AATTTGTATTGGTGAAGTTT+TGG + chr5_2:9073683-9073702 None:intergenic 25.0%
! TGTATGTTGAAATAATACCT+TGG + chr5_2:9073727-9073746 None:intergenic 25.0%
! TCAATAGTCCTTATGTTATA+TGG - chr5_2:9074594-9074613 Msa0755300:intron 25.0%
! TAAGATCAAGCATCAAAAAA+AGG + chr5_2:9074721-9074740 None:intergenic 25.0%
!! TAAAAAGGATTTTGTCTAGT+AGG - chr5_2:9075317-9075336 Msa0755300:intron 25.0%
! CATTACAATATACTACAACT+TGG + chr5_2:9075547-9075566 None:intergenic 25.0%
! GGTTATAAATCATATGATCA+AGG + chr5_2:9075636-9075655 None:intergenic 25.0%
! CAGTTAAAATTGGATTTGAA+AGG + chr5_2:9075863-9075882 None:intergenic 25.0%
! ATGAAAAATTGCAAGTATCA+TGG + chr5_2:9075964-9075983 None:intergenic 25.0%
!!! CATTTTTTCTGTTTATAGCT+TGG - chr5_2:9076235-9076254 Msa0755300:intron 25.0%
! ATGTTCATTATCACTAAACT+TGG + chr5_2:9076549-9076568 None:intergenic 25.0%
!!! TTTCCAAAGTTTTGTATAAC+CGG - chr5_2:9077144-9077163 Msa0755300:intron 25.0%
! AAATATATGATGTTCTAACC+GGG + chr5_2:9077289-9077308 None:intergenic 25.0%
! ACAAAATAATTACCTGAAGA+TGG + chr5_2:9077512-9077531 None:intergenic 25.0%
! ATATGTATCTATCACTATTC+TGG - chr5_2:9077541-9077560 Msa0755300:intron 25.0%
!!! ATTTTTTCCGTTCATATGTA+TGG - chr5_2:9077941-9077960 Msa0755300:intron 25.0%
!! CTTTGCTAGTTATTTAAGAT+AGG - chr5_2:9078198-9078217 Msa0755300:intron 25.0%
!! GTCTTACATATGATGTTTTT+CGG + chr5_2:9078382-9078401 None:intergenic 25.0%
! TGATTAATAGTATAGCTCAA+TGG - chr5_2:9078537-9078556 Msa0755300:intron 25.0%
! AATTGTAACATTAACGGTTT+AGG - chr5_2:9078634-9078653 Msa0755300:intron 25.0%
! CCTTTCTATTATTCAAACTT+AGG + chr5_2:9078733-9078752 None:intergenic 25.0%
! CCTAAGTTTGAATAATAGAA+AGG - chr5_2:9078730-9078749 Msa0755300:intron 25.0%
!!! GTATTTGTTATCTTTTGAAC+CGG - chr5_2:9078818-9078837 Msa0755300:intron 25.0%
! ATTCTTGTTCTAACGATATT+TGG - chr5_2:9078841-9078860 Msa0755300:CDS 25.0%
! AATGGTAGATTAGATTAAGT+TGG - chr5_2:9079221-9079240 Msa0755300:intron 25.0%
! ATGGTAGATTAGATTAAGTT+GGG - chr5_2:9079222-9079241 Msa0755300:intron 25.0%
!!! ATTTTTTTGGTTTTAGCAAG+TGG + chr5_2:9079369-9079388 None:intergenic 25.0%
!! AAAAATTGGTAGCTAAAAAC+TGG - chr5_2:9079394-9079413 Msa0755300:intron 25.0%
! GTTCAGATACAAAAAATTGA+TGG - chr5_2:9079475-9079494 Msa0755300:intron 25.0%
! CATTATTAGATAACTCTACT+AGG + chr5_2:9079565-9079584 None:intergenic 25.0%
! CTAGTAGAGTTATCTAATAA+TGG - chr5_2:9079563-9079582 Msa0755300:intron 25.0%
!! TAATAATGGAAAGTTTAGGT+AGG - chr5_2:9079577-9079596 Msa0755300:intron 25.0%
! GTTCATTCTCTCTTTCTTTT+TGG - chr5_2:9073787-9073806 Msa0755300:three_prime_UTR 30.0%
TTTCCATCCTTGTAAATCAT+TGG + chr5_2:9074363-9074382 None:intergenic 30.0%
AAGAACAAAGCTTGAATCTA+TGG - chr5_2:9074445-9074464 Msa0755300:intron 30.0%
! CTTGAATCTATGGACTATAA+TGG - chr5_2:9074455-9074474 Msa0755300:intron 30.0%
! TTGATCCCATATTTTTCGTT+TGG - chr5_2:9074487-9074506 Msa0755300:intron 30.0%
ATGCCATTCTATTGAAAAGA+GGG + chr5_2:9074554-9074573 None:intergenic 30.0%
AAAAGTGGTCCAAATTCTAA+AGG - chr5_2:9074837-9074856 Msa0755300:CDS 30.0%
! TCCAAATTCTAAAGGTAATG+TGG - chr5_2:9074845-9074864 Msa0755300:intron 30.0%
!! TCCACATTACCTTTAGAATT+TGG + chr5_2:9074849-9074868 None:intergenic 30.0%
ATATTCGCATGGAAACTAAA+AGG + chr5_2:9074949-9074968 None:intergenic 30.0%
AGAAACTGTATAGAAAAGTG+AGG + chr5_2:9075141-9075160 None:intergenic 30.0%
!! ATGATTTTCTGTCATTTCTG+CGG + chr5_2:9075257-9075276 None:intergenic 30.0%
CTAAAAGATACTTTCTGCAA+AGG - chr5_2:9075415-9075434 Msa0755300:CDS 30.0%
! TTTTCATCTTATGCGTTACT+CGG - chr5_2:9075490-9075509 Msa0755300:CDS 30.0%
GTTGTGTACTTACTAATAGT+TGG + chr5_2:9075739-9075758 None:intergenic 30.0%
TATATGAGAGCAGACAAATT+AGG + chr5_2:9075766-9075785 None:intergenic 30.0%
!! AACTTCTAGGAAGTACATTT+TGG + chr5_2:9075823-9075842 None:intergenic 30.0%
AGGACAAGCTGAAAAATATT+TGG - chr5_2:9076290-9076309 Msa0755300:intron 30.0%
GTTGTTGAATTCAATCAATC+AGG - chr5_2:9076391-9076410 Msa0755300:CDS 30.0%
TAATGAACATGAGAATTCGA+CGG - chr5_2:9076559-9076578 Msa0755300:intron 30.0%
TGCTCAATAGAAAAAGAAAG+TGG - chr5_2:9076671-9076690 Msa0755300:intron 30.0%
GCTCAATAGAAAAAGAAAGT+GGG - chr5_2:9076672-9076691 Msa0755300:intron 30.0%
CTCAATAGAAAAAGAAAGTG+GGG - chr5_2:9076673-9076692 Msa0755300:intron 30.0%
CCACAGAATAAAAAGTTTCT+CGG - chr5_2:9076842-9076861 Msa0755300:CDS 30.0%
!! TTAACAGCACGTGTTTTATT+TGG + chr5_2:9076890-9076909 None:intergenic 30.0%
CATGTGAGAATAAAGCTAAT+CGG - chr5_2:9076915-9076934 Msa0755300:intron 30.0%
!! AAGTTGATATCTATAGCACT+AGG - chr5_2:9077100-9077119 Msa0755300:intron 30.0%
!!! TTGCATATCCTTATTTTTCC+CGG - chr5_2:9077268-9077287 Msa0755300:intron 30.0%
TGATTATCTGATTACACTTC+TGG - chr5_2:9077337-9077356 Msa0755300:intron 30.0%
ATTAACTCCAATATACGAGA+AGG + chr5_2:9077453-9077472 None:intergenic 30.0%
ATACAATAGTTCCTTTGCAT+AGG + chr5_2:9077705-9077724 None:intergenic 30.0%
!! ATTAGAATGATATGGTGGAT+AGG + chr5_2:9077745-9077764 None:intergenic 30.0%
AAGGTGTGATTAGAATGATA+TGG + chr5_2:9077753-9077772 None:intergenic 30.0%
! TTTTTATCCGAAATCAAAGC+AGG - chr5_2:9077912-9077931 Msa0755300:intron 30.0%
! TGTATATCCTGCTTTGATTT+CGG + chr5_2:9077922-9077941 None:intergenic 30.0%
AAACAAGCCATACATATGAA+CGG + chr5_2:9077951-9077970 None:intergenic 30.0%
AAGTCAGCAAATTGAATACT+TGG - chr5_2:9078108-9078127 Msa0755300:CDS 30.0%
CACATGCTTGAATTAACTAT+TGG + chr5_2:9078166-9078185 None:intergenic 30.0%
TCGAACACAGACATTAAAAA+TGG + chr5_2:9078296-9078315 None:intergenic 30.0%
TTTCATCAAACTGCAGAATA+TGG - chr5_2:9078438-9078457 Msa0755300:intron 30.0%
! CAAGTTGAAGGAAACATAAA+GGG + chr5_2:9078519-9078538 None:intergenic 30.0%
!! TCAAGTTGAAGGAAACATAA+AGG + chr5_2:9078520-9078539 None:intergenic 30.0%
CAGTATTACACACCAATTAA+GGG + chr5_2:9078596-9078615 None:intergenic 30.0%
ACAGTATTACACACCAATTA+AGG + chr5_2:9078597-9078616 None:intergenic 30.0%
ATATCGTTAGAACAAGAATC+CGG + chr5_2:9078840-9078859 None:intergenic 30.0%
TGTGTTATATTCATTGATGC+AGG - chr5_2:9078866-9078885 Msa0755300:CDS 30.0%
TTGGATGAACTTTCTAAACA+AGG - chr5_2:9078984-9079003 Msa0755300:five_prime_UTR 30.0%
! TTGTTGTTCATGACTCAAAT+GGG - chr5_2:9079051-9079070 Msa0755300:intron 30.0%
GATTATTACAACAGTCCATA+TGG + chr5_2:9079159-9079178 None:intergenic 30.0%
CTTAATCTAATCTACCATTC+TGG + chr5_2:9079220-9079239 None:intergenic 30.0%
ACAAATGGAGATTACATACA+TGG - chr5_2:9079329-9079348 Msa0755300:intron 30.0%
TAGGTACAAACTTCAATTGA+TGG + chr5_2:9079510-9079529 None:intergenic 30.0%
CACACTAACACAAAAAACAT+AGG + chr5_2:9079529-9079548 None:intergenic 30.0%
!!! CTATGTTTTTTGTGTTAGTG+TGG - chr5_2:9079527-9079546 Msa0755300:intron 30.0%
AGCATGTAGTAACAATTATG+AGG - chr5_2:9079733-9079752 Msa0755300:five_prime_UTR 30.0%
AGACAAATCGAAGAAAACAA+AGG + chr5_2:9079763-9079782 None:intergenic 30.0%
ACTTCACCAATACAAATTCG+TGG - chr5_2:9073685-9073704 Msa0755300:three_prime_UTR 35.0%
CTTCACCAATACAAATTCGT+GGG - chr5_2:9073686-9073705 Msa0755300:three_prime_UTR 35.0%
TACCTTGGCTGAAAAGAAAA+TGG + chr5_2:9073712-9073731 None:intergenic 35.0%
!! TTGTCTTGTTGTGGTGTTAT+TGG - chr5_2:9073906-9073925 Msa0755300:three_prime_UTR 35.0%
TTTCTCCACAAGATCTTAAC+TGG - chr5_2:9073932-9073951 Msa0755300:three_prime_UTR 35.0%
TTCTCCACAAGATCTTAACT+GGG - chr5_2:9073933-9073952 Msa0755300:three_prime_UTR 35.0%
AAAACCCAGTTAAGATCTTG+TGG + chr5_2:9073940-9073959 None:intergenic 35.0%
TTGTGTAGAGGACTAGAAAA+AGG - chr5_2:9074310-9074329 Msa0755300:CDS 35.0%
AAGATTTCCCAAAAGGACTT+AGG - chr5_2:9074381-9074400 Msa0755300:CDS 35.0%
AGATTTCCCAAAAGGACTTA+GGG - chr5_2:9074382-9074401 Msa0755300:CDS 35.0%
GCAAGCCAAACGAAAAATAT+GGG + chr5_2:9074495-9074514 None:intergenic 35.0%
ACCATCTTTACTAAGGAAAG+TGG + chr5_2:9074530-9074549 None:intergenic 35.0%
TGCCATTCTATTGAAAAGAG+GGG + chr5_2:9074553-9074572 None:intergenic 35.0%
GATGCCATTCTATTGAAAAG+AGG + chr5_2:9074555-9074574 None:intergenic 35.0%
TAGAATGGCATCTTGTAAAG+TGG - chr5_2:9074563-9074582 Msa0755300:intron 35.0%
CCAGAGAACCATATAACATA+AGG + chr5_2:9074605-9074624 None:intergenic 35.0%
CCTTATGTTATATGGTTCTC+TGG - chr5_2:9074602-9074621 Msa0755300:intron 35.0%
! TATGGTTCTCTGGAAATTTG+TGG - chr5_2:9074612-9074631 Msa0755300:intron 35.0%
TTGATCTTAGCATATGTGTG+TGG - chr5_2:9074732-9074751 Msa0755300:intron 35.0%
! TCAGTTTTCCACGATAAAGT+CGG + chr5_2:9074891-9074910 None:intergenic 35.0%
CCAACTAATACATATTCGCA+TGG + chr5_2:9074960-9074979 None:intergenic 35.0%
CCATGCGAATATGTATTAGT+TGG - chr5_2:9074957-9074976 Msa0755300:intron 35.0%
AAAGTTCATTACCTCCACTA+TGG + chr5_2:9075228-9075247 None:intergenic 35.0%
TGTGAATATGGAGAACTTGA+CGG - chr5_2:9075353-9075372 Msa0755300:intron 35.0%
GACTTCACTCACTTAATACT+AGG + chr5_2:9075468-9075487 None:intergenic 35.0%
! GAAATTTGAAACCTCCATCA+GGG + chr5_2:9075696-9075715 None:intergenic 35.0%
! AGAAATTTGAAACCTCCATC+AGG + chr5_2:9075697-9075716 None:intergenic 35.0%
ATAAAGATCCATCCATGTTG+AGG - chr5_2:9075783-9075802 Msa0755300:intron 35.0%
TAAAGATCCATCCATGTTGA+GGG - chr5_2:9075784-9075803 Msa0755300:intron 35.0%
ACTTCCTAGAAGTTGAAAGA+AGG - chr5_2:9075829-9075848 Msa0755300:CDS 35.0%
TTTGCCTTCTTTCAACTTCT+AGG + chr5_2:9075836-9075855 None:intergenic 35.0%
ATATTGAGCTACACATCACT+AGG + chr5_2:9076059-9076078 None:intergenic 35.0%
!!! TGTTTTAATTGAGGAGTCGA+AGG + chr5_2:9076605-9076624 None:intergenic 35.0%
TCGACTCCTCAATTAAAACA+AGG - chr5_2:9076605-9076624 Msa0755300:intron 35.0%
CGACTCCTCAATTAAAACAA+GGG - chr5_2:9076606-9076625 Msa0755300:intron 35.0%
GACTCCTCAATTAAAACAAG+GGG - chr5_2:9076607-9076626 Msa0755300:intron 35.0%
! CCGAGAAACTTTTTATTCTG+TGG + chr5_2:9076845-9076864 None:intergenic 35.0%
!! CGATTAGCTTTATTCTCACA+TGG + chr5_2:9076917-9076936 None:intergenic 35.0%
ATCGGAAGAAGATGAAAGTA+AGG - chr5_2:9076933-9076952 Msa0755300:intron 35.0%
TGATATCTATAGCACTAGGA+TGG - chr5_2:9077104-9077123 Msa0755300:intron 35.0%
TGACCGGTTATACAAAACTT+TGG + chr5_2:9077150-9077169 None:intergenic 35.0%
ATCATGTTGGGAATATTGAC+CGG + chr5_2:9077166-9077185 None:intergenic 35.0%
TGTTCTAACCGGGAAAAATA+AGG + chr5_2:9077279-9077298 None:intergenic 35.0%
!!! AAATTTTTTGTGCAGCTCAG+CGG + chr5_2:9077391-9077410 None:intergenic 35.0%
GCTGCACAAAAAATTTGTGA+AGG - chr5_2:9077395-9077414 Msa0755300:intron 35.0%
CAAAAAATTTGTGAAGGCAG+TGG - chr5_2:9077401-9077420 Msa0755300:intron 35.0%
TTGGAGTTAATGAAAGTCGA+CGG - chr5_2:9077462-9077481 Msa0755300:intron 35.0%
TTGTATGCAAAGACCGATTA+TGG - chr5_2:9077719-9077738 Msa0755300:intron 35.0%
GTGTGATTAGAATGATATGG+TGG + chr5_2:9077750-9077769 None:intergenic 35.0%
ATCCATGATTTCTACATCAC+AGG + chr5_2:9077986-9078005 None:intergenic 35.0%
!! AGCAGTGGATTATAGTTATC+CGG - chr5_2:9078480-9078499 Msa0755300:intron 35.0%
TAGAACATGAGATTTGATCG+TGG + chr5_2:9078695-9078714 None:intergenic 35.0%
!! CTTGTTGTTCATGACTCAAA+TGG - chr5_2:9079050-9079069 Msa0755300:intron 35.0%
! TCTCTCAATTTTACCCTCTT+AGG - chr5_2:9079184-9079203 Msa0755300:intron 35.0%
ATCTAATCTACCATTCTGGT+TGG + chr5_2:9079216-9079235 None:intergenic 35.0%
ACAATGATGCATGCAACAAA+TGG - chr5_2:9079314-9079333 Msa0755300:intron 35.0%
GCTTCAATTCAACAAATGTG+TGG + chr5_2:9079420-9079439 None:intergenic 35.0%
TAGTGCAAAAATGTTGCATG+TGG - chr5_2:9079442-9079461 Msa0755300:intron 35.0%
!!! GTTTTTTGTGTTAGTGTGGT+TGG - chr5_2:9079531-9079550 Msa0755300:intron 35.0%
AAGTATGAAGAGAGAGAGAG+AGG + chr5_2:9073624-9073643 None:intergenic 40.0%
AATGGCCCACGAATTTGTAT+TGG + chr5_2:9073694-9073713 None:intergenic 40.0%
!!! GTGCTAGTTTTGTCTTGTTG+TGG - chr5_2:9073897-9073916 Msa0755300:three_prime_UTR 40.0%
GCAGAAGAACAAGAACAGAT+TGG - chr5_2:9074272-9074291 Msa0755300:CDS 40.0%
TGATCTGCTTACTTGTGTAG+AGG - chr5_2:9074298-9074317 Msa0755300:CDS 40.0%
TGCACTGCCAATGATTTACA+AGG - chr5_2:9074353-9074372 Msa0755300:CDS 40.0%
CTGCCAATGATTTACAAGGA+TGG - chr5_2:9074357-9074376 Msa0755300:CDS 40.0%
GGATGGAAAGATTTCCCAAA+AGG - chr5_2:9074374-9074393 Msa0755300:CDS 40.0%
! GAAGAACCCTAAGTCCTTTT+GGG + chr5_2:9074391-9074410 None:intergenic 40.0%
! AGAAGAACCCTAAGTCCTTT+TGG + chr5_2:9074392-9074411 None:intergenic 40.0%
CAGAATTGTTGTCTCCTTCA+AGG + chr5_2:9074415-9074434 None:intergenic 40.0%
GGCAAGCCAAACGAAAAATA+TGG + chr5_2:9074496-9074515 None:intergenic 40.0%
! GCCACTTTCCTTAGTAAAGA+TGG - chr5_2:9074526-9074545 Msa0755300:intron 40.0%
! GTCCCCTCTTTTCAATAGAA+TGG - chr5_2:9074548-9074567 Msa0755300:intron 40.0%
CAACATGCAACTAAAACCAC+AGG + chr5_2:9074638-9074657 None:intergenic 40.0%
TGTGTGGAATTTGACTCTAG+AGG - chr5_2:9074748-9074767 Msa0755300:intron 40.0%
GTGTGGAATTTGACTCTAGA+GGG - chr5_2:9074749-9074768 Msa0755300:intron 40.0%
! TGACTCTAGAGGGCTTATAA+AGG - chr5_2:9074759-9074778 Msa0755300:intron 40.0%
TCATGATTCCGACTTTATCG+TGG - chr5_2:9074880-9074899 Msa0755300:intron 40.0%
ACTACTTGAGATTGCTGACA+AGG + chr5_2:9075186-9075205 None:intergenic 40.0%
!! ATGGCAACATGGAAGCATTT+GGG + chr5_2:9075209-9075228 None:intergenic 40.0%
!! TATGGCAACATGGAAGCATT+TGG + chr5_2:9075210-9075229 None:intergenic 40.0%
TTTGTGTCCTGCAGAAGTTT+AGG - chr5_2:9075390-9075409 Msa0755300:intron 40.0%
! TTTAGAGCCTAAACTTCTGC+AGG + chr5_2:9075400-9075419 None:intergenic 40.0%
TGCGTTACTCGGATTTATCA+TGG - chr5_2:9075501-9075520 Msa0755300:CDS 40.0%
CAAATTTCTCGAGAATGCGA+AGG - chr5_2:9075708-9075727 Msa0755300:intron 40.0%
ACTAGTAAACACCCTCAACA+TGG + chr5_2:9075798-9075817 None:intergenic 40.0%
CACAATGATGAAGTGCATTG+CGG - chr5_2:9076013-9076032 Msa0755300:intron 40.0%
! AGTGCATTGCGGTAAGATTT+TGG - chr5_2:9076024-9076043 Msa0755300:intron 40.0%
TCTGTCTGAATCGCTTAAAC+CGG - chr5_2:9076436-9076455 Msa0755300:CDS 40.0%
GACTCTACAGATTCTTTGAC+CGG + chr5_2:9076458-9076477 None:intergenic 40.0%
!!! CTTGCCCCTTGTTTTAATTG+AGG + chr5_2:9076614-9076633 None:intergenic 40.0%
CTCAATTAAAACAAGGGGCA+AGG - chr5_2:9076612-9076631 Msa0755300:intron 40.0%
! TTGAGCAATTAGTCTGCTCA+TGG + chr5_2:9076658-9076677 None:intergenic 40.0%
AAAGAAAGTGGGGAACATGA+CGG - chr5_2:9076683-9076702 Msa0755300:CDS 40.0%
ACCTACGAAACCTCTGATTA+AGG - chr5_2:9076766-9076785 Msa0755300:CDS 40.0%
TACGAAACCTCTGATTAAGG+CGG - chr5_2:9076769-9076788 Msa0755300:CDS 40.0%
AATGGTACAGAGAAAGAGGA+AGG + chr5_2:9077062-9077081 None:intergenic 40.0%
TGCAAATGGTACAGAGAAAG+AGG + chr5_2:9077066-9077085 None:intergenic 40.0%
!! CTGATTACACTTCTGGTTCT+TGG - chr5_2:9077344-9077363 Msa0755300:intron 40.0%
!!! ACACTTCTGGTTCTTGGTTT+TGG - chr5_2:9077350-9077369 Msa0755300:intron 40.0%
AGCCATTCCTTCTCGTATAT+TGG - chr5_2:9077443-9077462 Msa0755300:intron 40.0%
CTCCAATATACGAGAAGGAA+TGG + chr5_2:9077448-9077467 None:intergenic 40.0%
TGCATAGGATCTCTTCGATT+TGG + chr5_2:9077690-9077709 None:intergenic 40.0%
ATCGAAGAGATCCTATGCAA+AGG - chr5_2:9077691-9077710 Msa0755300:intron 40.0%
!! TATGGTGGATAGGCCATAAT+CGG + chr5_2:9077735-9077754 None:intergenic 40.0%
TTCCAATGCCAACTTTCTGT+AGG + chr5_2:9077870-9077889 None:intergenic 40.0%
GATAAAAAGATTACCCCTGG+CGG + chr5_2:9077900-9077919 None:intergenic 40.0%
TCGGATAAAAAGATTACCCC+TGG + chr5_2:9077903-9077922 None:intergenic 40.0%
GACCTGTGATGTAGAAATCA+TGG - chr5_2:9077981-9078000 Msa0755300:intron 40.0%
!!! ACTGATTTTTCAGGTGCATG+TGG - chr5_2:9078024-9078043 Msa0755300:intron 40.0%
TAAGGGATACAGTGAGTTTG+AGG + chr5_2:9078079-9078098 None:intergenic 40.0%
! GCTGACTTACTTGAGTGTAA+GGG + chr5_2:9078096-9078115 None:intergenic 40.0%
!! TGCTGACTTACTTGAGTGTA+AGG + chr5_2:9078097-9078116 None:intergenic 40.0%
ATCAAACTGCAGAATATGGC+TGG - chr5_2:9078442-9078461 Msa0755300:intron 40.0%
TCAAACTGCAGAATATGGCT+GGG - chr5_2:9078443-9078462 Msa0755300:intron 40.0%
AAAGGGAAGAACTGCATTAC+CGG + chr5_2:9078502-9078521 None:intergenic 40.0%
CAATAACCGTTCCTACAATG+TGG - chr5_2:9078566-9078585 Msa0755300:intron 40.0%
ATATTCATTGATGCAGGCAG+AGG - chr5_2:9078872-9078891 Msa0755300:CDS 40.0%
TATCCATTGAAGGAGGTTTG+AGG + chr5_2:9078959-9078978 None:intergenic 40.0%
AACACACTATCCATTGAAGG+AGG + chr5_2:9078966-9078985 None:intergenic 40.0%
TCCTTCAATGGATAGTGTGT+TGG - chr5_2:9078965-9078984 Msa0755300:exon 40.0%
TCCAACACACTATCCATTGA+AGG + chr5_2:9078969-9078988 None:intergenic 40.0%
! TCCTTTTAGCAAGAAGAGCA+AGG - chr5_2:9079010-9079029 Msa0755300:five_prime_UTR 40.0%
! CCTTTTAGCAAGAAGAGCAA+GGG - chr5_2:9079011-9079030 Msa0755300:five_prime_UTR 40.0%
TCATGAACAACAAGTCAGCA+TGG + chr5_2:9079044-9079063 None:intergenic 40.0%
AGTAACTAGCACTGTTTGGT+GGG + chr5_2:9079078-9079097 None:intergenic 40.0%
TACAACAGTCCATATGGCAT+TGG + chr5_2:9079153-9079172 None:intergenic 40.0%
! AATCTACCATTCTGGTTGGT+TGG + chr5_2:9079212-9079231 None:intergenic 40.0%
! TACATAAGGTGTCCGTGTTA+TGG + chr5_2:9079276-9079295 None:intergenic 40.0%
CATTTCCCAGAAGCTACATA+AGG + chr5_2:9079290-9079309 None:intergenic 40.0%
TTGTGTTAGTGTGGTTGGAT+AGG - chr5_2:9079536-9079555 Msa0755300:intron 40.0%
TGTGTTAGTGTGGTTGGATA+GGG - chr5_2:9079537-9079556 Msa0755300:intron 40.0%
GGAAAGTTTAGGTAGGAAGT+AGG - chr5_2:9079584-9079603 Msa0755300:intron 40.0%
TGATTGATGAGTCCAGTCTT+TGG - chr5_2:9079641-9079660 Msa0755300:five_prime_UTR 40.0%
!! GGCCATTTTCTTTTCAGCCA+AGG - chr5_2:9073707-9073726 Msa0755300:three_prime_UTR 45.0%
AAAGGATGCCAAACCAGCTA+TGG - chr5_2:9074328-9074347 Msa0755300:CDS 45.0%
AGTGCAAACCATAGCTGGTT+TGG + chr5_2:9074339-9074358 None:intergenic 45.0%
CTTAGGGTTCTTCTCCTTGA+AGG - chr5_2:9074398-9074417 Msa0755300:CDS 45.0%
AGGAAAGTGGCAAAGAAGTG+AGG + chr5_2:9074517-9074536 None:intergenic 45.0%
AGAGGGGACCATCTTTACTA+AGG + chr5_2:9074537-9074556 None:intergenic 45.0%
ATGCTTCCATGTTGCCATAG+TGG - chr5_2:9075211-9075230 Msa0755300:CDS 45.0%
TTACCTCCACTATGGCAACA+TGG + chr5_2:9075220-9075239 None:intergenic 45.0%
ATACTCACCTGCAACTCAGA+TGG + chr5_2:9075667-9075686 None:intergenic 45.0%
GAGAGCAGACAAATTAGGCT+CGG + chr5_2:9075761-9075780 None:intergenic 45.0%
GTAAACACCCTCAACATGGA+TGG + chr5_2:9075794-9075813 None:intergenic 45.0%
TGCATCGAAAATCAGGAGGA+CGG + chr5_2:9076195-9076214 None:intergenic 45.0%
CGTATGCATCGAAAATCAGG+AGG + chr5_2:9076199-9076218 None:intergenic 45.0%
GCACGTATGCATCGAAAATC+AGG + chr5_2:9076202-9076221 None:intergenic 45.0%
CCTCAGAAAGTGGTTTAGTG+AGG + chr5_2:9076273-9076292 None:intergenic 45.0%
CCTCACTAAACCACTTTCTG+AGG - chr5_2:9076270-9076289 Msa0755300:intron 45.0%
TTCAGCTTGTCCTCAGAAAG+TGG + chr5_2:9076283-9076302 None:intergenic 45.0%
TTGGCAGCATGTTGTTCACA+AGG - chr5_2:9076309-9076328 Msa0755300:intron 45.0%
AGCATGTTGTTCACAAGGTC+TGG - chr5_2:9076314-9076333 Msa0755300:intron 45.0%
CATGTAGTGCGTTGTCTGTT+TGG + chr5_2:9076493-9076512 None:intergenic 45.0%
GACGGCAAGCGATAAATATC+CGG - chr5_2:9076577-9076596 Msa0755300:intron 45.0%
AAAACAAGGGGCAAGGTTAG+TGG - chr5_2:9076619-9076638 Msa0755300:intron 45.0%
ATCAGAGGTTTCGTAGGTTG+AGG + chr5_2:9076764-9076783 None:intergenic 45.0%
GCCTTAATCAGAGGTTTCGT+AGG + chr5_2:9076770-9076789 None:intergenic 45.0%
TCTTCTTCCGCCTTAATCAG+AGG + chr5_2:9076779-9076798 None:intergenic 45.0%
! GCGGAAGAAGATTTTGCCAA+CGG - chr5_2:9076788-9076807 Msa0755300:CDS 45.0%
! AGATTTTGCCAACGGTTCCA+AGG - chr5_2:9076796-9076815 Msa0755300:CDS 45.0%
! GATTTTGCCAACGGTTCCAA+GGG - chr5_2:9076797-9076816 Msa0755300:CDS 45.0%
AAAAAGTTTCTCGGCAACGC+TGG - chr5_2:9076851-9076870 Msa0755300:CDS 45.0%
CAGAGAAAGAGGAAGGAGAA+GGG + chr5_2:9077055-9077074 None:intergenic 45.0%
ACAGAGAAAGAGGAAGGAGA+AGG + chr5_2:9077056-9077075 None:intergenic 45.0%
CATGAGCGTGTGTATGCAAA+TGG + chr5_2:9077080-9077099 None:intergenic 45.0%
GCATGCAGATGCATCATGTT+GGG + chr5_2:9077178-9077197 None:intergenic 45.0%
AGCATGCAGATGCATCATGT+TGG + chr5_2:9077179-9077198 None:intergenic 45.0%
!!! CTGGTTCTTGGTTTTGGTTC+AGG - chr5_2:9077356-9077375 Msa0755300:intron 45.0%
!!! TGGTTTTGGTTCAGGTAGAC+TGG - chr5_2:9077364-9077383 Msa0755300:intron 45.0%
TAATGTGGCAAGCCATCTTC+AGG - chr5_2:9077497-9077516 Msa0755300:intron 45.0%
CAAGAGACAGATCATCCACA+CGG - chr5_2:9077647-9077666 Msa0755300:intron 45.0%
! ATTTTCGATCTTCGTCCGTG+TGG + chr5_2:9077665-9077684 None:intergenic 45.0%
ACACGGACGAAGATCGAAAA+TGG - chr5_2:9077664-9077683 Msa0755300:intron 45.0%
AGCTCCTGCATATCCTATGT+GGG - chr5_2:9077779-9077798 Msa0755300:intron 45.0%
!! AAACAGCTGGTGTACCGATT+TGG - chr5_2:9077817-9077836 Msa0755300:intron 45.0%
TATGGCAGCCTACAGAAAGT+TGG - chr5_2:9077859-9077878 Msa0755300:intron 45.0%
AGCCTACAGAAAGTTGGCAT+TGG - chr5_2:9077865-9077884 Msa0755300:intron 45.0%
! TTTGAGGTGGAGGCAACATT+GGG + chr5_2:9078063-9078082 None:intergenic 45.0%
! ATACAGTGAGTTTGAGGTGG+AGG + chr5_2:9078073-9078092 None:intergenic 45.0%
TTAAGGGTCGACCACATTGT+AGG + chr5_2:9078580-9078599 None:intergenic 45.0%
CAATGTGGTCGACCCTTAAT+TGG - chr5_2:9078581-9078600 Msa0755300:intron 45.0%
! CAGAGTGTCCAACTATAGTG+CGG + chr5_2:9078764-9078783 None:intergenic 45.0%
AGGAGGCAATAAACAAGCCA+TGG - chr5_2:9078916-9078935 Msa0755300:CDS 45.0%
CCTATAGGTAAAGGTAGCCA+TGG + chr5_2:9078936-9078955 None:intergenic 45.0%
CCATGGCTACCTTTACCTAT+AGG - chr5_2:9078933-9078952 Msa0755300:CDS 45.0%
! GGTTTGAGGCCTATAGGTAA+AGG + chr5_2:9078945-9078964 None:intergenic 45.0%
CCCTTGCTCTTCTTGCTAAA+AGG + chr5_2:9079014-9079033 None:intergenic 45.0%
CAGTAACTAGCACTGTTTGG+TGG + chr5_2:9079079-9079098 None:intergenic 45.0%
CCACAGTAACTAGCACTGTT+TGG + chr5_2:9079082-9079101 None:intergenic 45.0%
CCAAACAGTGCTAGTTACTG+TGG - chr5_2:9079079-9079098 Msa0755300:intron 45.0%
ACAGTGCTAGTTACTGTGGA+TGG - chr5_2:9079083-9079102 Msa0755300:intron 45.0%
! TAGTTACTGTGGATGGTGGT+GGG - chr5_2:9079090-9079109 Msa0755300:intron 45.0%
!!! GACCAGTTATTTTTCCCCTG+TGG - chr5_2:9079244-9079263 Msa0755300:intron 45.0%
GACCACAGGGGAAAAATAAC+TGG + chr5_2:9079249-9079268 None:intergenic 45.0%
! AAGGTGTCCGTGTTATGGTA+GGG + chr5_2:9079271-9079290 None:intergenic 45.0%
! TAAGGTGTCCGTGTTATGGT+AGG + chr5_2:9079272-9079291 None:intergenic 45.0%
GGACACCTTATGTAGCTTCT+GGG - chr5_2:9079282-9079301 Msa0755300:intron 45.0%
GTGTTAGTGTGGTTGGATAG+GGG - chr5_2:9079538-9079557 Msa0755300:intron 45.0%
TGTTAGTGTGGTTGGATAGG+GGG - chr5_2:9079539-9079558 Msa0755300:intron 45.0%
TTGATGAGTCCAGTCTTTGG+CGG - chr5_2:9079644-9079663 Msa0755300:five_prime_UTR 45.0%
AGTTAGTATCCGCCAAAGAC+TGG + chr5_2:9079656-9079675 None:intergenic 45.0%
!!! CAATTTTTTATTTATTTTTT+TGG + chr5_2:9079382-9079401 None:intergenic 5.0%
!! CAAAAAAATAAATAAAAAAT+TGG - chr5_2:9079380-9079399 Msa0755300:intron 5.0%
GTAAAGTGCAGCGCGTTGAA+GGG + chr5_2:9073602-9073621 None:intergenic 50.0%
TTGGCAGTGCAAACCATAGC+TGG + chr5_2:9074344-9074363 None:intergenic 50.0%
! CTCTGGAAATTTGTGGCCTG+TGG - chr5_2:9074619-9074638 Msa0755300:intron 50.0%
CTTCCATGTTGCCATAGTGG+AGG - chr5_2:9075214-9075233 Msa0755300:CDS 50.0%
GTGAGTATAAGCTGCCCTGA+TGG - chr5_2:9075679-9075698 Msa0755300:intron 50.0%
AGTATAAGCTGCCCTGATGG+AGG - chr5_2:9075682-9075701 Msa0755300:intron 50.0%
CAATCAGGCATTCAATGCCG+AGG - chr5_2:9076406-9076425 Msa0755300:CDS 50.0%
! GTCTGTTTGGAGCTGCAACA+TGG + chr5_2:9076480-9076499 None:intergenic 50.0%
AATTGAGGAGTCGAAGGAGC+CGG + chr5_2:9076599-9076618 None:intergenic 50.0%
ATTCTCACCCTTGGAACCGT+TGG + chr5_2:9076807-9076826 None:intergenic 50.0%
AACGGTTCCAAGGGTGAGAA+TGG - chr5_2:9076806-9076825 Msa0755300:CDS 50.0%
ACGGTTCCAAGGGTGAGAAT+GGG - chr5_2:9076807-9076826 Msa0755300:CDS 50.0%
GTGAAGGCAGTGGAACATCT+AGG - chr5_2:9077411-9077430 Msa0755300:intron 50.0%
ATATGCAGGAGCTGGAGGAA+AGG + chr5_2:9077772-9077791 None:intergenic 50.0%
ATAGGATATGCAGGAGCTGG+AGG + chr5_2:9077777-9077796 None:intergenic 50.0%
CACATAGGATATGCAGGAGC+TGG + chr5_2:9077780-9077799 None:intergenic 50.0%
CAGCTCCTGCATATCCTATG+TGG - chr5_2:9077778-9077797 Msa0755300:intron 50.0%
GCTCCTGCATATCCTATGTG+GGG - chr5_2:9077780-9077799 Msa0755300:intron 50.0%
TATCCTATGTGGGGCCAACA+CGG - chr5_2:9077789-9077808 Msa0755300:intron 50.0%
! CAGCTGTTTGACTTCCGTGT+TGG + chr5_2:9077806-9077825 None:intergenic 50.0%
CAACACGGAAGTCAAACAGC+TGG - chr5_2:9077804-9077823 Msa0755300:intron 50.0%
!! TGTACCGATTTGGAGTCCTC+CGG - chr5_2:9077827-9077846 Msa0755300:intron 50.0%
TAACCCGGAGGACTCCAAAT+CGG + chr5_2:9077834-9077853 None:intergenic 50.0%
CTTTCTGTAGGCTGCCATAG+AGG + chr5_2:9077858-9077877 None:intergenic 50.0%
ATTGGAAGCCATATCCGCCA+GGG - chr5_2:9077883-9077902 Msa0755300:intron 50.0%
! AAGATTACCCCTGGCGGATA+TGG + chr5_2:9077894-9077913 None:intergenic 50.0%
TTCAGGTGCATGTGGATGCA+TGG - chr5_2:9078032-9078051 Msa0755300:intron 50.0%
TCAGGTGCATGTGGATGCAT+GGG - chr5_2:9078033-9078052 Msa0755300:intron 50.0%
! GTTTGAGGTGGAGGCAACAT+TGG + chr5_2:9078064-9078083 None:intergenic 50.0%
GGGATACAGTGAGTTTGAGG+TGG + chr5_2:9078076-9078095 None:intergenic 50.0%
GATGCACAACGCTAAAGCAG+TGG - chr5_2:9078465-9078484 Msa0755300:intron 50.0%
GGTCGACCACATTGTAGGAA+CGG + chr5_2:9078575-9078594 None:intergenic 50.0%
TTCTGCAGCCGCACTATAGT+TGG - chr5_2:9078753-9078772 Msa0755300:intron 50.0%
ATTGATGCAGGCAGAGGAAG+TGG - chr5_2:9078878-9078897 Msa0755300:CDS 50.0%
!! AGTGGTGGACAAGGCTGTAA+AGG - chr5_2:9078896-9078915 Msa0755300:CDS 50.0%
! GAAGGAGGTTTGAGGCCTAT+AGG + chr5_2:9078951-9078970 None:intergenic 50.0%
AGGCCTCAAACCTCCTTCAA+TGG - chr5_2:9078953-9078972 Msa0755300:exon 50.0%
GTGCTAGTTACTGTGGATGG+TGG - chr5_2:9079086-9079105 Msa0755300:intron 50.0%
! CTAGTTACTGTGGATGGTGG+TGG - chr5_2:9079089-9079108 Msa0755300:intron 50.0%
! TGGTGGACAGACAAACTTGC+TGG - chr5_2:9079113-9079132 Msa0755300:intron 50.0%
!! AACTTGCTGGCAGACATGCA+TGG - chr5_2:9079126-9079145 Msa0755300:intron 50.0%
! ACTTGCTGGCAGACATGCAT+GGG - chr5_2:9079127-9079146 Msa0755300:intron 50.0%
ATGCATGGGCCAATGCCATA+TGG - chr5_2:9079141-9079160 Msa0755300:intron 50.0%
! TGGTTGGTTGGAGCCTAAGA+GGG + chr5_2:9079200-9079219 None:intergenic 50.0%
TAGGCTCCAACCAACCAGAA+TGG - chr5_2:9079203-9079222 Msa0755300:intron 50.0%
TGTTATGGTAGGGACCACAG+GGG + chr5_2:9079261-9079280 None:intergenic 50.0%
GTGTTATGGTAGGGACCACA+GGG + chr5_2:9079262-9079281 None:intergenic 50.0%
CTGTGGTCCCTACCATAACA+CGG - chr5_2:9079261-9079280 Msa0755300:intron 50.0%
CGGACACCTTATGTAGCTTC+TGG - chr5_2:9079281-9079300 Msa0755300:intron 50.0%
GGTAAAGTGCAGCGCGTTGA+AGG + chr5_2:9073603-9073622 None:intergenic 55.0%
! TTCAGACAGAGCGCTTGCCT+CGG + chr5_2:9076426-9076445 None:intergenic 55.0%
! GGGGCAAGGTTAGTGGATGA+TGG - chr5_2:9076626-9076645 Msa0755300:intron 55.0%
GAAAGTGGGGAACATGACGG+TGG - chr5_2:9076686-9076705 Msa0755300:CDS 55.0%
CGGTTCCAAGGGTGAGAATG+GGG - chr5_2:9076808-9076827 Msa0755300:CDS 55.0%
TGAAGCCCCATTCTCACCCT+TGG + chr5_2:9076816-9076835 None:intergenic 55.0%
AAGTTTCTCGGCAACGCTGG+TGG - chr5_2:9076854-9076873 Msa0755300:CDS 55.0%
AGGAAGGAGAAGGGTAGCGA+AGG + chr5_2:9077046-9077065 None:intergenic 55.0%
TGGCCCCACATAGGATATGC+AGG + chr5_2:9077786-9077805 None:intergenic 55.0%
!! GTACCGATTTGGAGTCCTCC+GGG - chr5_2:9077828-9077847 Msa0755300:intron 55.0%
GTCCTCCGGGTTATCCTCTA+TGG - chr5_2:9077841-9077860 Msa0755300:intron 55.0%
TGCCATAGAGGATAACCCGG+AGG + chr5_2:9077846-9077865 None:intergenic 55.0%
GGCTGCCATAGAGGATAACC+CGG + chr5_2:9077849-9077868 None:intergenic 55.0%
CATTGGAAGCCATATCCGCC+AGG - chr5_2:9077882-9077901 Msa0755300:intron 55.0%
TTGGAAGCCATATCCGCCAG+GGG - chr5_2:9077884-9077903 Msa0755300:intron 55.0%
CAGGTGCATGTGGATGCATG+GGG - chr5_2:9078034-9078053 Msa0755300:intron 55.0%
GGTGGACAAGGCTGTAAAGG+AGG - chr5_2:9078899-9078918 Msa0755300:CDS 55.0%
!! TTACTGTGGATGGTGGTGGG+TGG - chr5_2:9079093-9079112 Msa0755300:intron 55.0%
! CTGGTTGGTTGGAGCCTAAG+AGG + chr5_2:9079201-9079220 None:intergenic 55.0%
CGTGTTATGGTAGGGACCAC+AGG + chr5_2:9079263-9079282 None:intergenic 55.0%
GCAACTCAGATGGACGCACG+AGG + chr5_2:9075657-9075676 None:intergenic 60.0%
CGTGCGTCCATCTGAGTTGC+AGG - chr5_2:9075657-9075676 Msa0755300:intron 60.0%
! CTTCCGTGTTGGCCCCACAT+AGG + chr5_2:9077795-9077814 None:intergenic 60.0%
GATGCAGGCAGAGGAAGTGG+TGG - chr5_2:9078881-9078900 Msa0755300:CDS 60.0%
!! GGCAGAGGAAGTGGTGGACA+AGG - chr5_2:9078887-9078906 Msa0755300:CDS 60.0%
!! CTGTGGATGGTGGTGGGTGG+TGG - chr5_2:9079096-9079115 Msa0755300:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9073486 9079830 9073486 ID=Msa0755300;Name=Msa0755300
chr5_2 mRNA 9073486 9079830 9073486 ID=Msa0755300-mRNA-1;Parent=Msa0755300;Name=Msa0755300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=314|0.83|0.76|1|0.83|0.69|13|781|494
chr5_2 exon 9073486 9074428 9073486 ID=Msa0755300-mRNA-1:exon:4206;Parent=Msa0755300-mRNA-1
chr5_2 exon 9074815 9074862 9074815 ID=Msa0755300-mRNA-1:exon:4205;Parent=Msa0755300-mRNA-1
chr5_2 exon 9075211 9075279 9075211 ID=Msa0755300-mRNA-1:exon:4204;Parent=Msa0755300-mRNA-1
chr5_2 exon 9075411 9075659 9075411 ID=Msa0755300-mRNA-1:exon:4203;Parent=Msa0755300-mRNA-1
chr5_2 exon 9075798 9075938 9075798 ID=Msa0755300-mRNA-1:exon:4202;Parent=Msa0755300-mRNA-1
chr5_2 exon 9076367 9076559 9076367 ID=Msa0755300-mRNA-1:exon:4201;Parent=Msa0755300-mRNA-1
chr5_2 exon 9076683 9076903 9076683 ID=Msa0755300-mRNA-1:exon:4200;Parent=Msa0755300-mRNA-1
chr5_2 exon 9076986 9077063 9076986 ID=Msa0755300-mRNA-1:exon:4199;Parent=Msa0755300-mRNA-1
chr5_2 exon 9077282 9077328 9077282 ID=Msa0755300-mRNA-1:exon:4198;Parent=Msa0755300-mRNA-1
chr5_2 exon 9077571 9077637 9077571 ID=Msa0755300-mRNA-1:exon:4197;Parent=Msa0755300-mRNA-1
chr5_2 exon 9078081 9078160 9078081 ID=Msa0755300-mRNA-1:exon:4196;Parent=Msa0755300-mRNA-1
chr5_2 exon 9078840 9079040 9078840 ID=Msa0755300-mRNA-1:exon:4195;Parent=Msa0755300-mRNA-1
chr5_2 exon 9079588 9079830 9079588 ID=Msa0755300-mRNA-1:exon:4194;Parent=Msa0755300-mRNA-1
chr5_2 five_prime_UTR 9079588 9079830 9079588 ID=Msa0755300-mRNA-1:five_prime_utr;Parent=Msa0755300-mRNA-1
chr5_2 five_prime_UTR 9078970 9079040 9078970 ID=Msa0755300-mRNA-1:five_prime_utr;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9078840 9078969 9078840 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9078081 9078160 9078081 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9077571 9077637 9077571 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9077282 9077328 9077282 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9076986 9077063 9076986 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9076683 9076903 9076683 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9076367 9076559 9076367 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9075798 9075938 9075798 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9075411 9075659 9075411 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9075211 9075279 9075211 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9074815 9074862 9074815 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 CDS 9074267 9074428 9074267 ID=Msa0755300-mRNA-1:cds;Parent=Msa0755300-mRNA-1
chr5_2 three_prime_UTR 9073486 9074266 9073486 ID=Msa0755300-mRNA-1:three_prime_utr;Parent=Msa0755300-mRNA-1
Gene Sequence

>Msa0755300

ATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTCCCAAAAGGACTTAGGGTTCTTCTCCTTGAAGGAGACAACAATTCTGCTTCTGAAATAAGAACAAAGCTTGAATCTATGGACTATAATGTTTCTACGTTCTACAATGAGAATGAAGCCTTGTCAGCAATCTCAAGTAGTCCCAAATGCTTCCATGTTGCCATAGTGGAGGTGAGTATAAGCTGCCCTGATGGAGGTTTCAAATTTCTCGAGAATGCGAAGGACTTGCCAACTATTATGACTTCGAATAGTCAGTGCATAAACACAATGATGAAGTGCATTGCGCTTGGTGCAGTTGAGTTCCTCACTAAACCACTTTCTGAGGACAAGCTGAAAAATATTTGGCAGCATGTTGTTCACAAGGCATTCAATGCCGAGGCAAGCGCTCTGTCTGAATCGCTTAAACCGGTCAAAGAATCTGTAGAGTCCATGTTGCAGCTCCAAACAGACAACGCACTACATGAAAGTACAATATCAATAGATTTAGATAAGGTGTCCAAGTTTAGTGATAATGAACATGAGAATTCGACGGCAAGCGATAAATATCCGGCTCCTTCGACTCCTCAATTAAAACAAGGGGCAAGTTCTCCTCAACCTACGAAACCTCTGATTAAGGCGGAAGAAGATTTTGCCAACGGTTCCAAGGGTGAGAATGGGGCTTCATTGAATCCACAGAATAAAAAGTTTCTCGGCAACGCTGGTGGTAATACATCTCCAAATAAAACACGTGCTGTTAACGATCCATGTGAGAATAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACCGCTGAGCTGCACAAAAAATTTGTGAAGGCAGTGGAACATCTAGGTATTGATCAAGCCATTCCTTCTCGTATATTGGAGTTAATGAAAGTCGACGGTTTGACAAGGCATAATGTGGCAAGCCATCTTCAGATCATCCACACGGACGAAGATCGAAAATGGCCAAATCGAAGAGATCCTATGCAAAGGAACTATTGTATGCAAAGACCGATTATGGCCTATCCACCATATCATTCTAATCACACCTTTCCTCCAGCTCCTGCATATCCTATGTGGGGCCAACACGGAAGTCAAACAGCTGGTGTACCGATTTGGAGTCCTCCGGGTTATCCTCTATGGCAGCCTACAGAAAGTTGGCATTGGAAGCCATATCCGCCAGGGGTGCATGTGGATGCATGGGGTAACCCAATGTTGCCTCCACCTCAAACTCACTGTATCCCTTACACTCAAAATATGGCTGGGATGCACAACGCTAAAGCAGTGGATTATAGTTATCCGGCAGAGGAAGTGGTGGACAAGGCTGTAAAGGAGGCAATAAACAAGCCATGGCTACCTTTACCTATAGGCCTCAAACCTCCTTCAATGGATAGTGTGTTGGATGAACTTTCTAAACAAGGCATTCCTTTTAGCAAGAAGAGCAAGGGCTCTAGACCATGCTGA
Protein sequence

>Msa0755300

MVCTANDLQGWKDFPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSISCPDGGFKFLENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQHVVHKAFNAEASALSESLKPVKESVESMLQLQTDNALHESTISIDLDKVSKFSDNEHENSTASDKYPAPSTPQLKQGASSPQPTKPLIKAEEDFANGSKGENGASLNPQNKKFLGNAGGNTSPNKTRAVNDPCENKANRKKMKVDWTAELHKKFVKAVEHLGIDQAIPSRILELMKVDGLTRHNVASHLQIIHTDEDRKWPNRRDPMQRNYCMQRPIMAYPPYHSNHTFPPAPAYPMWGQHGSQTAGVPIWSPPGYPLWQPTESWHWKPYPPGVHVDAWGNPMLPPPQTHCIPYTQNMAGMHNAKAVDYSYPAEEVVDKAVKEAINKPWLPLPIGLKPPSMDSVLDELSKQGIPFSKKSKGSRPC*