AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755580 MtrunA17_Chr5g0400461 96.119 335 13 0 1 335 1 335 0.0 674
Msa0755580 MtrunA17_Chr4g0054791 60.290 345 100 9 1 335 1 318 7.21e-132 378
Msa0755580 MtrunA17_Chr6g0481091 62.500 176 56 2 1 173 1 169 3.13e-74 229
Msa0755580 MtrunA17_Chr3g0109821 64.024 164 48 2 1 160 1 157 4.58e-70 230
Msa0755580 MtrunA17_Chr5g0433781 63.804 163 49 2 1 160 1 156 7.67e-67 221
Msa0755580 MtrunA17_Chr2g0309891 46.930 228 102 3 1 216 1 221 8.07e-67 213
Msa0755580 MtrunA17_Chr3g0128151 53.529 170 69 3 5 171 21 183 5.23e-53 183
Msa0755580 MtrunA17_Chr5g0428991 53.704 162 65 3 6 164 25 179 1.39e-52 183
Msa0755580 MtrunA17_Chr1g0201021 55.769 156 59 2 8 160 21 169 1.79e-52 181
Msa0755580 MtrunA17_Chr3g0128111 52.201 159 66 2 9 164 45 196 4.42e-52 172
Msa0755580 MtrunA17_Chr2g0318081 51.190 168 68 4 1 164 11 168 2.31e-51 174
Msa0755580 MtrunA17_Chr2g0309331 50.307 163 69 4 2 160 6 160 8.58e-51 172
Msa0755580 MtrunA17_Chr4g0018391 49.057 159 72 3 4 160 5 156 1.07e-50 172
Msa0755580 MtrunA17_Chr7g0252971 47.059 170 79 4 4 164 6 173 1.20e-50 171
Msa0755580 MtrunA17_Chr8g0384721 48.588 177 71 4 2 168 3 169 1.37e-50 169
Msa0755580 MtrunA17_Chr4g0056541 49.686 159 71 3 4 160 5 156 1.73e-50 171
Msa0755580 MtrunA17_Chr3g0130731 51.190 168 66 4 2 163 3 160 2.77e-50 169
Msa0755580 MtrunA17_Chr8g0359921 52.469 162 63 3 5 161 13 165 8.21e-50 169
Msa0755580 MtrunA17_Chr1g0200561 49.682 157 70 3 6 160 19 168 8.90e-50 169
Msa0755580 MtrunA17_Chr4g0017921 51.266 158 69 2 4 160 6 156 9.08e-50 169
Msa0755580 MtrunA17_Chr5g0405211 50.314 159 66 4 6 160 8 157 9.93e-50 169
Msa0755580 MtrunA17_Chr5g0398971 47.500 160 75 3 4 160 5 158 1.05e-49 169
Msa0755580 MtrunA17_Chr2g0318101 48.824 170 66 5 5 160 14 176 1.09e-49 169
Msa0755580 MtrunA17_Chr1g0197361 52.564 156 64 3 8 160 10 158 1.20e-49 174
Msa0755580 MtrunA17_Chr4g0060931 44.560 193 84 4 6 193 17 191 1.62e-49 169
Msa0755580 MtrunA17_Chr2g0316971 50.898 167 70 3 4 165 21 180 2.39e-49 169
Msa0755580 MtrunA17_Chr8g0372121 50.303 165 69 5 1 161 1 156 2.45e-49 167
Msa0755580 MtrunA17_Chr3g0091921 46.237 186 84 4 6 184 16 192 1.07e-48 165
Msa0755580 MtrunA17_Chr8g0364791 45.405 185 91 2 1 182 1 178 2.46e-48 168
Msa0755580 MtrunA17_Chr1g0197351 54.167 168 59 3 4 161 40 199 2.49e-48 169
Msa0755580 MtrunA17_Chr4g0076731 50.649 154 67 3 8 160 56 201 2.75e-48 167
Msa0755580 MtrunA17_Chr4g0042561 40.426 235 107 6 2 215 5 227 2.77e-48 163
Msa0755580 MtrunA17_Chr4g0047841 54.348 138 56 2 6 143 15 145 2.88e-48 165
Msa0755580 MtrunA17_Chr6g0453131 47.904 167 67 4 6 160 15 173 3.81e-48 166
Msa0755580 MtrunA17_Chr3g0130101 46.857 175 83 3 8 179 9 176 4.24e-48 165
Msa0755580 MtrunA17_Chr3g0124761 52.174 161 61 5 6 160 7 157 4.58e-48 163
Msa0755580 MtrunA17_Chr6g0484441 49.045 157 70 3 5 160 4 151 7.71e-48 164
Msa0755580 MtrunA17_Chr3g0092671 50.318 157 68 3 8 161 7 156 1.15e-47 168
Msa0755580 MtrunA17_Chr8g0346001 44.211 190 80 5 2 174 11 191 2.78e-47 165
Msa0755580 MtrunA17_Chr6g0453451 50.625 160 65 3 6 160 20 170 3.58e-47 162
Msa0755580 MtrunA17_Chr5g0417791 39.914 233 109 5 6 216 3 226 7.48e-47 159
Msa0755580 MtrunA17_Chr1g0147421 46.857 175 84 5 5 177 26 193 3.40e-46 160
Msa0755580 MtrunA17_Chr8g0361731 46.108 167 67 4 8 160 16 173 4.54e-46 160
Msa0755580 MtrunA17_Chr3g0139331 45.946 185 84 5 5 188 10 179 4.61e-46 159
Msa0755580 MtrunA17_Chr7g0214071 44.809 183 89 4 2 182 11 183 5.90e-46 157
Msa0755580 MtrunA17_Chr1g0183741 48.795 166 77 4 3 168 7 164 7.10e-46 157
Msa0755580 MtrunA17_Chr8g0384201 43.784 185 94 3 1 182 1 178 1.49e-45 161
Msa0755580 MtrunA17_Chr5g0417001 47.024 168 67 5 6 160 14 172 1.58e-45 159
Msa0755580 MtrunA17_Chr7g0263931 39.344 244 117 9 6 241 11 231 6.24e-45 156
Msa0755580 MtrunA17_Chr7g0261411 51.613 155 67 4 3 157 7 153 1.08e-44 154
Msa0755580 MtrunA17_Chr7g0253011 50.676 148 60 3 6 153 17 151 1.22e-44 157
Msa0755580 MtrunA17_Chr2g0326361 46.061 165 71 4 5 160 13 168 1.32e-44 155
Msa0755580 MtrunA17_Chr6g0461661 52.206 136 58 2 6 141 18 146 3.20e-44 155
Msa0755580 MtrunA17_Chr4g0038751 39.048 210 120 3 8 217 17 218 1.95e-42 149
Msa0755580 MtrunA17_Chr3g0144271 54.745 137 54 3 6 141 23 152 9.52e-42 150
Msa0755580 MtrunA17_Chr2g0312321 46.429 168 75 4 1 164 6 162 2.17e-41 146
Msa0755580 MtrunA17_Chr8g0345671 48.701 154 70 4 6 158 11 156 2.28e-41 148
Msa0755580 MtrunA17_Chr7g0217711 51.515 132 55 2 9 140 22 144 9.35e-41 140
Msa0755580 MtrunA17_Chr7g0217721 52.273 132 54 2 9 140 22 144 1.10e-40 145
Msa0755580 MtrunA17_Chr2g0311661 42.262 168 79 3 8 161 23 186 2.34e-40 143
Msa0755580 MtrunA17_Chr5g0442771 42.262 168 73 4 8 160 20 178 1.02e-39 142
Msa0755580 MtrunA17_Chr2g0311651 42.857 175 81 6 2 161 17 187 1.21e-39 142
Msa0755580 MtrunA17_Chr2g0321741 44.444 162 66 4 26 187 12 149 4.52e-38 139
Msa0755580 MtrunA17_Chr8g0385991 43.293 164 76 4 2 157 10 164 3.08e-37 133
Msa0755580 MtrunA17_Chr8g0345691 44.156 154 77 4 6 158 12 157 8.88e-37 137
Msa0755580 MtrunA17_Chr8g0345711 44.099 161 78 5 6 162 12 164 4.11e-35 125
Msa0755580 MtrunA17_Chr3g0131911 42.373 177 85 5 2 169 10 178 1.20e-34 127
Msa0755580 MtrunA17_Chr2g0321631 44.172 163 71 6 7 157 5 159 2.42e-34 126
Msa0755580 MtrunA17_Chr7g0266701 42.690 171 78 7 5 162 3 166 3.44e-34 126
Msa0755580 MtrunA17_Chr4g0026141 42.236 161 78 5 6 157 5 159 1.72e-32 121
Msa0755580 MtrunA17_Chr8g0345731 40.000 155 85 3 6 157 24 173 9.05e-32 117
Msa0755580 MtrunA17_Chr3g0113001 50.943 106 39 2 61 160 18 116 2.83e-30 116
Msa0755580 MtrunA17_Chr4g0050701 35.838 173 87 4 6 169 11 168 5.85e-29 110
Msa0755580 MtrunA17_Chr8g0345701 41.060 151 66 5 4 139 5 147 2.99e-26 102
Msa0755580 MtrunA17_Chr8g0345721 37.278 169 65 5 5 138 29 191 1.14e-25 102
Msa0755580 MtrunA17_Chr8g0345741 40.323 124 67 3 17 139 2 119 7.46e-25 98.6
Msa0755580 MtrunA17_Chr3g0113031 48.454 97 36 2 71 160 3 92 3.15e-23 97.1
Msa0755580 MtrunA17_Chr7g0243371 44.444 90 45 1 56 145 12 96 7.89e-21 86.7
Msa0755580 MtrunA17_Chr8g0384351 31.527 203 104 9 1 200 2 172 8.22e-18 80.1
Msa0755580 MtrunA17_Chr7g0251651 28.902 173 98 6 3 164 15 173 6.90e-14 69.3
Msa0755580 MtrunA17_Chr3g0130321 27.778 180 102 4 4 169 5 170 1.71e-13 68.6
Msa0755580 MtrunA17_Chr4g0040541 30.357 168 91 8 6 157 48 205 2.67e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755580 AT4G17980.2 52.632 323 108 10 1 315 1 286 4.52e-98 292
Msa0755580 AT4G17980.1 57.778 270 79 7 1 264 1 241 4.82e-97 288
Msa0755580 AT5G46590.1 54.982 271 92 7 1 266 1 246 6.00e-93 279
Msa0755580 AT1G32510.1 65.534 206 62 4 1 202 1 201 1.39e-86 262
Msa0755580 AT5G46590.2 53.731 268 89 7 1 266 1 235 1.87e-86 262
Msa0755580 AT1G65910.1 64.162 173 52 2 1 170 1 166 2.59e-71 233
Msa0755580 AT5G17260.1 46.809 282 119 7 1 267 1 266 2.77e-70 226
Msa0755580 AT1G54330.1 65.217 161 49 1 1 161 1 154 1.89e-69 219
Msa0755580 AT3G17730.1 63.030 165 49 3 1 161 1 157 4.52e-69 216
Msa0755580 AT3G03200.1 65.244 164 46 3 1 160 1 157 1.05e-68 223
Msa0755580 AT1G33060.1 52.761 163 67 2 1 160 19 174 2.16e-54 188
Msa0755580 AT3G10500.1 54.037 161 64 2 4 161 7 160 2.32e-54 186
Msa0755580 AT1G33060.2 52.761 163 67 2 1 160 19 174 2.40e-54 188
Msa0755580 AT4G35580.1 55.346 159 61 3 5 160 8 159 1.01e-53 184
Msa0755580 AT4G35580.3 55.346 159 61 3 5 160 8 159 1.10e-53 184
Msa0755580 AT4G35580.2 55.346 159 61 3 5 160 8 159 1.20e-53 184
Msa0755580 AT3G49530.2 51.553 161 69 2 5 162 12 166 1.48e-53 181
Msa0755580 AT3G49530.1 51.553 161 69 2 5 162 12 166 3.40e-53 182
Msa0755580 AT5G04410.1 54.088 159 63 2 5 160 8 159 9.30e-53 182
Msa0755580 AT5G22290.1 51.176 170 71 4 1 170 16 173 1.55e-52 177
Msa0755580 AT5G24590.2 50.595 168 74 2 1 165 8 169 1.92e-52 179
Msa0755580 AT1G71930.2 49.686 159 71 3 4 160 7 158 2.43e-51 173
Msa0755580 AT1G71930.1 49.686 159 71 3 4 160 7 158 2.43e-51 173
Msa0755580 AT1G79580.3 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0755580 AT1G79580.5 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0755580 AT1G79580.4 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0755580 AT1G79580.2 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0755580 AT1G79580.1 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0755580 AT3G10490.1 51.534 163 68 2 3 161 24 179 4.09e-51 170
Msa0755580 AT3G10480.1 52.727 165 67 3 1 161 22 179 4.65e-51 176
Msa0755580 AT4G36160.2 53.165 158 65 4 5 160 13 163 5.79e-51 174
Msa0755580 AT4G36160.1 53.165 158 65 4 5 160 9 159 6.11e-51 173
Msa0755580 AT4G36160.3 53.165 158 65 4 5 160 9 159 6.11e-51 173
Msa0755580 AT4G27410.2 53.459 159 62 4 5 160 13 162 9.31e-51 171
Msa0755580 AT2G18060.3 50.617 162 71 4 1 160 4 158 1.08e-50 172
Msa0755580 AT2G18060.1 50.617 162 71 4 1 160 4 158 1.08e-50 172
Msa0755580 AT3G10480.2 51.829 164 69 2 1 161 22 178 1.59e-50 174
Msa0755580 AT3G44290.2 53.548 155 60 3 8 162 16 158 1.62e-50 168
Msa0755580 AT1G12260.2 49.686 159 71 3 4 160 5 156 1.84e-50 171
Msa0755580 AT1G12260.1 49.686 159 71 3 4 160 5 156 1.87e-50 172
Msa0755580 AT4G10350.1 42.616 237 104 8 1 220 1 222 2.54e-50 171
Msa0755580 AT5G64060.1 48.171 164 75 2 1 161 1 157 2.65e-50 171
Msa0755580 AT5G07680.2 49.143 175 67 4 6 175 3 160 2.85e-50 170
Msa0755580 AT5G07680.1 49.143 175 67 4 6 175 17 174 3.75e-50 170
Msa0755580 AT2G02450.2 51.948 154 65 3 8 160 53 198 7.84e-50 171
Msa0755580 AT1G52890.1 52.727 165 62 5 5 164 13 166 7.99e-50 169
Msa0755580 AT3G04070.2 50.877 171 70 5 4 164 8 174 9.07e-50 169
Msa0755580 AT2G02450.1 51.948 154 65 3 8 160 53 198 9.94e-50 170
Msa0755580 AT3G44290.1 53.548 155 60 3 8 162 16 158 1.04e-49 169
Msa0755580 AT3G10490.2 51.534 163 68 2 3 161 24 179 1.13e-49 172
Msa0755580 AT3G15500.1 52.727 165 62 5 5 164 13 166 1.60e-49 168
Msa0755580 AT2G24430.2 51.250 160 69 3 5 162 15 167 2.19e-49 167
Msa0755580 AT2G24430.1 51.250 160 69 3 5 162 15 167 2.19e-49 167
Msa0755580 AT2G27300.1 51.572 159 65 3 1 159 9 155 2.58e-49 168
Msa0755580 AT5G09330.5 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0755580 AT5G09330.2 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0755580 AT5G09330.4 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0755580 AT5G09330.3 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0755580 AT5G09330.1 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0755580 AT1G62700.1 47.853 163 76 3 4 164 5 160 1.19e-48 168
Msa0755580 AT1G62700.2 47.853 163 76 3 4 164 5 160 1.19e-48 168
Msa0755580 AT5G61430.1 48.000 175 69 4 6 175 16 173 1.56e-48 166
Msa0755580 AT5G39610.1 51.250 160 64 3 6 160 20 170 2.01e-48 164
Msa0755580 AT1G61110.1 46.857 175 70 4 2 161 12 178 2.22e-48 165
Msa0755580 AT1G69490.1 46.591 176 75 4 4 169 7 173 3.76e-48 163
Msa0755580 AT3G04070.1 56.115 139 57 3 4 142 8 142 4.28e-48 166
Msa0755580 AT3G29035.1 54.088 159 54 4 6 162 24 165 4.98e-48 164
Msa0755580 AT5G66300.1 49.383 162 68 5 5 161 11 163 6.26e-48 163
Msa0755580 AT1G33280.1 48.734 158 73 2 4 160 6 156 7.11e-48 163
Msa0755580 AT1G34190.1 50.307 163 71 2 2 161 12 167 7.35e-48 169
Msa0755580 AT3G18400.1 48.780 164 69 4 5 164 4 156 8.06e-48 164
Msa0755580 AT4G27410.3 50.000 174 62 5 5 160 13 179 8.59e-48 164
Msa0755580 AT3G15170.1 50.932 161 67 3 6 161 20 173 8.63e-48 163
Msa0755580 AT1G32770.1 46.286 175 69 5 2 160 12 177 1.13e-47 164
Msa0755580 AT5G08790.1 49.697 165 65 3 5 161 6 160 2.77e-47 161
Msa0755580 AT1G01720.1 55.474 137 51 3 6 142 7 133 5.83e-47 160
Msa0755580 AT3G04060.1 49.080 163 70 3 4 161 18 172 7.67e-47 162
Msa0755580 AT3G61910.1 43.017 179 74 4 2 161 7 176 1.38e-46 161
Msa0755580 AT5G62380.2 47.170 159 75 3 4 160 5 156 1.44e-46 161
Msa0755580 AT5G62380.1 47.170 159 75 3 4 160 5 156 1.44e-46 161
Msa0755580 AT2G43000.1 50.000 158 64 4 8 160 20 167 1.47e-46 159
Msa0755580 AT3G10480.3 43.939 198 67 3 1 161 22 212 4.98e-46 164
Msa0755580 AT1G34180.3 50.641 156 67 3 8 160 18 166 6.27e-46 162
Msa0755580 AT2G46770.1 50.345 145 60 3 2 143 12 147 7.43e-46 160
Msa0755580 AT5G18270.2 49.080 163 70 3 4 161 19 173 9.04e-46 159
Msa0755580 AT5G18270.1 46.471 170 78 3 4 168 19 180 1.74e-45 158
Msa0755580 AT1G77450.1 42.534 221 99 9 3 215 5 205 1.80e-45 155
Msa0755580 AT5G53950.1 49.697 165 71 3 6 165 17 174 2.03e-45 159
Msa0755580 AT1G34180.1 50.000 156 68 2 8 160 18 166 3.65e-45 162
Msa0755580 AT2G33480.1 48.521 169 72 3 2 167 11 167 5.64e-45 155
Msa0755580 AT5G63790.1 49.390 164 65 4 5 160 49 202 6.07e-45 156
Msa0755580 AT5G63790.2 49.390 164 65 4 5 160 59 212 6.42e-45 156
Msa0755580 AT2G17040.1 40.553 217 109 5 1 205 1 209 8.09e-45 154
Msa0755580 AT5G39820.1 37.118 229 110 4 8 212 22 240 2.88e-44 155
Msa0755580 AT3G15510.1 44.970 169 72 4 10 164 21 182 3.12e-44 155
Msa0755580 AT1G26870.1 47.337 169 66 4 6 160 16 175 3.25e-44 157
Msa0755580 AT1G76420.1 50.955 157 68 3 6 160 22 171 4.18e-44 154
Msa0755580 AT1G32870.1 52.469 162 63 3 4 160 8 160 1.02e-43 157
Msa0755580 AT1G32870.2 52.469 162 63 3 4 160 8 160 1.04e-43 157
Msa0755580 AT1G52880.1 47.239 163 70 4 10 161 21 178 1.05e-43 153
Msa0755580 AT2G33480.2 47.904 167 74 3 2 167 11 165 1.10e-43 151
Msa0755580 AT1G32870.3 52.469 162 63 3 4 160 44 196 2.69e-43 157
Msa0755580 AT1G34180.4 41.063 207 100 4 2 193 12 211 7.25e-43 154
Msa0755580 AT5G13180.1 46.988 166 76 3 2 165 10 165 2.57e-42 147
Msa0755580 AT1G34180.2 47.024 168 67 4 8 160 18 178 4.38e-42 154
Msa0755580 AT3G12977.1 44.118 170 82 3 1 166 13 173 8.42e-41 144
Msa0755580 AT4G28530.1 45.714 175 69 6 3 160 7 172 8.91e-40 143
Msa0755580 AT1G56010.2 44.643 168 77 5 1 161 14 172 3.43e-39 141
Msa0755580 AT3G12910.1 42.708 192 79 8 8 176 23 206 7.21e-38 137
Msa0755580 AT5G04395.1 46.053 152 65 3 5 143 27 174 3.05e-35 127
Msa0755580 AT5G61430.2 48.333 120 42 3 61 175 6 110 1.23e-30 117
Msa0755580 AT5G22380.1 40.881 159 77 6 9 157 8 159 1.13e-29 114
Msa0755580 AT4G10350.2 41.520 171 72 6 63 220 20 175 3.04e-29 114
Msa0755580 AT3G44350.2 34.123 211 121 7 3 205 2 202 2.63e-28 110
Msa0755580 AT4G01550.1 35.938 192 112 4 9 199 7 188 8.26e-28 113
Msa0755580 AT4G01520.1 34.884 215 124 7 7 213 5 211 7.78e-27 107
Msa0755580 AT3G12977.2 49.074 108 44 2 63 166 20 120 1.45e-26 105
Msa0755580 AT3G04420.2 36.709 158 89 4 7 162 4 152 1.67e-26 107
Msa0755580 AT3G04420.1 36.709 158 89 4 7 162 4 152 1.97e-26 107
Msa0755580 AT3G44350.1 39.456 147 78 5 3 145 2 141 4.51e-26 102
Msa0755580 AT1G56010.1 49.541 109 40 3 63 164 8 108 2.23e-25 103
Msa0755580 AT4G28530.2 46.491 114 41 3 3 99 7 117 3.62e-25 103
Msa0755580 AT1G02230.1 35.057 174 97 7 7 175 4 166 1.71e-24 102
Msa0755580 AT4G01540.3 37.267 161 93 4 9 167 7 161 1.75e-24 103
Msa0755580 AT4G01540.4 37.267 161 93 4 9 167 7 161 1.89e-24 102
Msa0755580 AT5G64530.1 35.025 197 108 5 4 200 1 177 1.94e-24 98.6
Msa0755580 AT2G33480.3 47.222 108 47 2 63 167 10 110 2.95e-24 99.0
Msa0755580 AT1G02250.1 34.804 204 109 8 7 197 4 196 3.33e-24 102
Msa0755580 AT4G01540.2 37.267 161 93 4 9 167 7 161 5.07e-24 102
Msa0755580 AT4G01540.1 37.267 161 93 4 9 167 7 161 5.31e-24 102
Msa0755580 AT5G64530.2 39.855 138 64 4 5 142 2 120 6.89e-24 96.3
Msa0755580 AT1G02220.1 35.766 137 70 4 7 138 4 127 2.20e-21 94.4
Msa0755580 AT1G01010.1 34.783 161 96 6 9 165 6 161 9.11e-21 92.8
Msa0755580 AT3G10490.4 50.588 85 31 2 81 161 2 79 3.41e-18 84.7
Msa0755580 AT3G10490.3 50.588 85 31 2 81 161 2 79 3.41e-18 84.7
Msa0755580 AT5G14000.1 30.556 180 108 4 2 179 11 175 6.84e-18 81.3
Msa0755580 AT3G55210.1 31.515 165 91 5 6 157 11 166 6.12e-17 80.1
Msa0755580 AT5G14000.2 33.333 141 81 3 2 140 11 140 7.01e-17 77.4
Msa0755580 AT3G56530.1 29.487 156 99 4 5 157 51 198 1.59e-16 79.3
Msa0755580 AT2G43000.2 42.708 96 42 3 70 160 2 89 1.95e-16 77.0
Msa0755580 AT5G50820.1 30.198 202 108 8 1 191 10 189 4.55e-16 75.9
Msa0755580 AT2G18060.2 48.684 76 31 3 86 160 2 70 1.41e-14 73.2
Msa0755580 AT5G22290.2 42.857 84 37 3 87 170 2 74 9.28e-13 67.4
Msa0755580 AT1G28470.1 33.775 151 76 8 5 140 76 217 2.46e-11 64.3

Find 205 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGCCGGTCACAATTTA+AGG 0.122169 5_2:+9411393 Msa0755580:three_prime_UTR
ATTCTTATAACCTTTGTATA+TGG 0.174550 5_2:+9411722 Msa0755580:three_prime_UTR
TTATAGATTTCATCCGAATT+TGG 0.216728 5_2:+9410320 Msa0755580:three_prime_UTR
AAGTGAAACTGAAAATATTT+TGG 0.218909 5_2:-9407867 None:intergenic
GAGACGAGGTTGAGACTTTA+TGG 0.233252 5_2:+9411017 Msa0755580:three_prime_UTR
TCTCAACCTCGTCTCTTCTT+AGG 0.247691 5_2:-9411009 Msa0755590:CDS
ACTCAAAGACAGACATTAAA+AGG 0.255543 5_2:-9410166 None:intergenic
ACCATTCACCACTTTCTCTT+TGG 0.260036 5_2:+9407515 Msa0755580:five_prime_UTR
CTATTTGTCCTTGAACCATT+TGG 0.260232 5_2:-9408837 None:intergenic
TGTGGAAACAGTTGCAAAAT+TGG 0.260709 5_2:-9410716 Msa0755590:CDS
ACTCTTCTGCATTGCTTGAT+TGG 0.276649 5_2:-9410873 Msa0755590:CDS
GGTTGCATGTCACCTTATTC+AGG 0.278280 5_2:+9409914 Msa0755580:CDS
CAAAAGTGAAGGCTTTAAAA+AGG 0.279028 5_2:-9407556 None:intergenic
CCTGACACTCCTAGCCAAAT+TGG 0.283562 5_2:+9409893 Msa0755580:CDS
CAAAGGTTATAAGAATGTTT+TGG 0.284044 5_2:-9411715 Msa0755590:CDS
CTCGTTCCCATTGGTTGAAA+TGG 0.287030 5_2:-9409270 None:intergenic
ATGATCAGATTCATTCATTC+AGG 0.291099 5_2:+9409972 Msa0755580:CDS
AGATGATCGGAGAGTATTTC+GGG 0.298853 5_2:+9411069 Msa0755580:three_prime_UTR
AAACTTCCTTGTCCTGAATA+AGG 0.309664 5_2:-9409926 None:intergenic
TATTTGTCCTTGAACCATTT+GGG 0.317092 5_2:-9408836 None:intergenic
ACATTGCATTGGAAGTTAAT+AGG 0.319093 5_2:-9409347 None:intergenic
TGCATGGTTGTGTTTGTGTT+TGG 0.345549 5_2:+9410984 Msa0755580:three_prime_UTR
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 5_2:-9411562 Msa0755590:CDS
GGCTTTCCAGTAGCCAGCTT+TGG 0.349829 5_2:-9408865 None:intergenic
AAGATGATCGGAGAGTATTT+CGG 0.350796 5_2:+9411068 Msa0755580:three_prime_UTR
CTGTTTGAGATCAGAAATTC+AGG 0.351569 5_2:-9411453 Msa0755590:intron
AATTCTACAAATTTGATCCT+TGG 0.356563 5_2:+9408065 Msa0755580:CDS
GTGTGTAATATTCCTAAGTT+TGG 0.358091 5_2:+9407640 Msa0755580:five_prime_UTR
TTCAGGACAAGGAAGTTTCA+TGG 0.359502 5_2:+9409931 Msa0755580:CDS
CATCCGAATTTGGTTTATAT+CGG 0.360065 5_2:+9410330 Msa0755580:three_prime_UTR
CCAGGCGTTGCATGCAAGTT+GGG 0.364061 5_2:-9411579 Msa0755590:intron
TTCTTATAACCTTTGTATAT+GGG 0.365139 5_2:+9411723 Msa0755580:three_prime_UTR
ATTCTACAAATTTGATCCTT+GGG 0.375015 5_2:+9408066 Msa0755580:CDS
CAACCACGGTGTAGCCGAAT+TGG 0.384589 5_2:+9411486 Msa0755580:three_prime_UTR
GTCTGATGCGTAGGCACAAT+TGG 0.387107 5_2:-9411345 Msa0755590:intron
ATTATGTTGTGTAGGTTTCC+CGG 0.391471 5_2:+9410285 Msa0755580:three_prime_UTR
CCTCTTTCCTCCTTGTCCTT+CGG 0.394344 5_2:-9409222 None:intergenic
AAGGTGACATGCAACCAATT+TGG 0.396046 5_2:-9409907 None:intergenic
ATTGAGGAAGTTGAAGAACT+TGG 0.400564 5_2:-9410685 Msa0755590:CDS
CCCAACTTGCATGCAACGCC+TGG 0.403538 5_2:+9411579 Msa0755580:three_prime_UTR
TAATGAATATATGTTATAAC+AGG 0.408990 5_2:+9411229 Msa0755580:three_prime_UTR
ATACCAATCCTACAACCTTC+TGG 0.410453 5_2:+9409405 Msa0755580:CDS
TGACCGATATAAACCAAATT+CGG 0.415532 5_2:-9410333 None:intergenic
TCTGAAAACAAAGAAGGAAT+AGG 0.417637 5_2:+9410008 Msa0755580:exon
CTTTAGGTGATCGAACCAAT+TGG 0.418283 5_2:+9408991 Msa0755580:CDS
CCAATTTGGCTAGGAGTGTC+AGG 0.418438 5_2:-9409893 None:intergenic
AATTTGTAGAATTCAATAAC+AGG 0.424548 5_2:-9408055 None:intergenic
GAGCCACCAAAGCTGGCTAC+TGG 0.428919 5_2:+9408859 Msa0755580:CDS
TACTGTGGAAGAGCTCCTTT+AGG 0.431670 5_2:+9408975 Msa0755580:CDS
TGGGAACGAGGTTTCTTGTC+AGG 0.433403 5_2:+9409283 Msa0755580:CDS
ATTCATCAAATAAAAGACTA+AGG 0.436824 5_2:+9410525 Msa0755580:three_prime_UTR
TCTATAAAAGTGATATCATC+CGG 0.438124 5_2:-9410304 None:intergenic
CAAGATTTGATCTCGGAGTT+CGG 0.438171 5_2:+9411322 Msa0755580:three_prime_UTR
TAGTTTCTGTCTAGTGCAAA+TGG 0.441303 5_2:-9410220 None:intergenic
TGCAATGTCCCTCCTATGGC+TGG 0.442131 5_2:+9409362 Msa0755580:CDS
GCGACAGTTTCTTATGCTGT+TGG 0.449688 5_2:+9411101 Msa0755580:three_prime_UTR
ACTAACCAGTGTTTCATCAA+TGG 0.450544 5_2:+9411683 Msa0755580:intron
GCAAATAGTGCCTACGTATC+CGG 0.451186 5_2:+9411286 Msa0755580:three_prime_UTR
CCGAAGGACAAGGAGGAAAG+AGG 0.451346 5_2:+9409222 Msa0755580:CDS
CGGAACAATTTGCCTTCTCA+TGG 0.454690 5_2:-9410583 Msa0755590:CDS
TGGGAGAGCCAGAAGGTTGT+AGG 0.455808 5_2:-9409413 None:intergenic
ACAAATAGAGCCACCAAAGC+TGG 0.456357 5_2:+9408852 Msa0755580:CDS
AAAATTGGATCTTGTTATTG+AGG 0.463462 5_2:-9410701 Msa0755590:CDS
ACAAGCCGGTCACAATTTAA+GGG 0.465753 5_2:+9411394 Msa0755580:three_prime_UTR
TCATCTTCATGAAGCTCTAC+AGG 0.467841 5_2:-9411052 Msa0755590:CDS
GGAGCTGTTCTTCGCCAATT+CGG 0.468447 5_2:-9411500 Msa0755590:CDS
AACATGGCTCTAACTGATCT+TGG 0.468885 5_2:+9411180 Msa0755580:three_prime_UTR
TTTAGGTGATCGAACCAATT+GGG 0.469718 5_2:+9408992 Msa0755580:CDS
ATATTCATGCATGACCCAAT+TGG 0.471797 5_2:-9409006 None:intergenic
TTGAGGAAGTTGAAGAACTT+GGG 0.474676 5_2:-9410684 Msa0755590:CDS
AGGAACATAGAAATATAGAA+TGG 0.474922 5_2:+9407922 Msa0755580:exon
AGTTAAACAAAAGATGTGAA+TGG 0.475321 5_2:+9410101 Msa0755580:three_prime_UTR
TCAGATGATTTGATATCTCC+AGG 0.475473 5_2:+9411750 Msa0755580:three_prime_UTR
CCAACCGATGAAGAGTTGAT+AGG 0.477569 5_2:+9407980 Msa0755580:CDS
TTTCCAGTAGCCAGCTTTGG+TGG 0.478466 5_2:-9408862 None:intergenic
GGGCAATTACAAGATGTTGT+TGG 0.478523 5_2:+9409755 Msa0755580:CDS
AAAGATGCAAAAGCAGCAAA+AGG 0.479326 5_2:+9410742 Msa0755580:three_prime_UTR
TGCTTTAAAGAGTTTAGAGC+TGG 0.480144 5_2:-9410652 Msa0755590:CDS
TACACCGTGGTTGCTCTACA+TGG 0.480998 5_2:-9411476 Msa0755590:CDS
GCAATTCCATTTCAACCAAT+GGG 0.481299 5_2:+9409264 Msa0755580:CDS
TGTTCAAGGATCCATGCATA+AGG 0.481436 5_2:-9411161 Msa0755590:CDS
AAGAGGGTTAGAGCTAATGA+TGG 0.484892 5_2:+9409239 Msa0755580:CDS
ACAATGATTCTGGAGCATAA+TGG 0.486626 5_2:+9407724 Msa0755580:five_prime_UTR
ATCAGTTAGAGCCATGTTCA+AGG 0.486726 5_2:-9411175 Msa0755590:CDS
AGCAATTCCATTTCAACCAA+TGG 0.488117 5_2:+9409263 Msa0755580:CDS
GGTAGACATGGAAAAGGCTC+TGG 0.488167 5_2:-9410922 Msa0755590:CDS
CATGATTCTTGATTCTTCAA+AGG 0.488637 5_2:+9409439 Msa0755580:CDS
TTAATCCCTTAAATTGTGAC+CGG 0.488804 5_2:-9411399 Msa0755590:intron
GGAGGAGCTTCACTGCCTCC+AGG 0.489497 5_2:+9407944 Msa0755580:CDS
GCCAGGCGTTGCATGCAAGT+TGG 0.489802 5_2:-9411580 Msa0755590:intron
AAAATAAACCAAAGAGAAAG+TGG 0.490273 5_2:-9407523 None:intergenic
TGCATGCAAGTTGGGAGCCA+AGG 0.493195 5_2:-9411571 Msa0755590:CDS
CCAATGCAATGTCCCTCCTA+TGG 0.494392 5_2:+9409358 Msa0755580:CDS
ATGGATAGGTATAGTACTCT+TGG 0.500590 5_2:+9407829 Msa0755580:five_prime_UTR
GGTTGTAGGATTGGTATCAG+AGG 0.501312 5_2:-9409399 None:intergenic
GAGCCAGAAGGTTGTAGGAT+TGG 0.503637 5_2:-9409408 None:intergenic
ATCTGATCATAGCATTCATA+AGG 0.503854 5_2:-9409959 None:intergenic
CCTATCAACTCTTCATCGGT+TGG 0.504532 5_2:-9407980 None:intergenic
GTTTGAGCATGTTGTTTGCA+TGG 0.505188 5_2:+9410968 Msa0755580:three_prime_UTR
TGTAATTTATTATGTTGTGT+AGG 0.505587 5_2:+9410277 Msa0755580:three_prime_UTR
ATCAATTCTGAAAACAAAGA+AGG 0.507825 5_2:+9410002 Msa0755580:exon
GGAACATAGAAATATAGAAT+GGG 0.513465 5_2:+9407923 Msa0755580:exon
TGGCAGCAATATGTAAAAGT+TGG 0.518460 5_2:-9411521 Msa0755590:CDS
GTCTATTCAATTCCATGAGA+AGG 0.518933 5_2:+9410571 Msa0755580:three_prime_UTR
TCAACTCTTCATCGGTTGGA+TGG 0.522689 5_2:-9407976 None:intergenic
CGGGATCGCAAGTACCCAAA+TGG 0.524999 5_2:+9408822 Msa0755580:CDS
ATGCATAAGGGTTGCAGCAG+AGG 0.527389 5_2:-9411148 Msa0755590:CDS
ATTTCCACTGAGACTGTCAC+AGG 0.530687 5_2:+9408930 Msa0755580:CDS
ACAAGAAACCTCGTTCCCAT+TGG 0.531913 5_2:-9409279 None:intergenic
AGACATTTACCTCCGAGCCT+TGG 0.532346 5_2:-9409049 None:intergenic
TATGGAGAAATTGATAGCCC+TGG 0.532775 5_2:-9411768 Msa0755590:CDS
GCAAGTACCCAAATGGTTCA+AGG 0.532989 5_2:+9408829 Msa0755580:CDS
AAGAATCAAGAATCATGTCA+TGG 0.536644 5_2:-9409433 None:intergenic
AAGTTACAAGATGTTTCAGT+GGG 0.536724 5_2:+9410060 Msa0755580:three_prime_UTR
CACTCTGCAGTCTGATGCGT+AGG 0.538972 5_2:-9411354 Msa0755590:intron
TGTCTTGATTTAGATTTACA+AGG 0.540561 5_2:+9411833 Msa0755580:three_prime_UTR
CCATAGGAGGGACATTGCAT+TGG 0.543388 5_2:-9409358 None:intergenic
AATAGCTTATATAATGGATG+AGG 0.543955 5_2:+9410377 Msa0755580:three_prime_UTR
GTTCAAGGATCCATGCATAA+GGG 0.544118 5_2:-9411160 Msa0755590:CDS
AAACTAGCTGCTGCACAAGT+TGG 0.544612 5_2:-9410949 Msa0755590:CDS
GATTGGTATCAGAGGAAGCT+TGG 0.544770 5_2:-9409391 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 5_2:+9411554 Msa0755580:three_prime_UTR
TCATGATCAATTTACTCAGT+AGG 0.549130 5_2:-9410417 None:intergenic
GAAACAGTTTGCAAAAGTGA+AGG 0.549134 5_2:-9407567 None:intergenic
AACTAGCAGGACTATTCTCA+AGG 0.550921 5_2:+9409734 Msa0755580:intron
TATATCGGTCATTGTATGTG+TGG 0.552924 5_2:+9410345 Msa0755580:three_prime_UTR
TTTACCTCCGAGCCTTGGCT+AGG 0.552976 5_2:-9409044 None:intergenic
CAAGTTGGTCAAGGTAGACA+TGG 0.553561 5_2:-9410934 Msa0755590:CDS
ACCAAAGAGAAAGTGGTGAA+TGG 0.554609 5_2:-9407516 None:intergenic
GGTCAAGGTAGACATGGAAA+AGG 0.558508 5_2:-9410928 Msa0755590:CDS
TTTGATCCTTGGGAGTTACC+TGG 0.560186 5_2:+9408076 Msa0755580:CDS
ATCTTGTGTTCAAACACAGC+CGG 0.561794 5_2:-9411305 Msa0755590:intron
TTGAACACAAGATTTGATCT+CGG 0.564648 5_2:+9411315 Msa0755580:three_prime_UTR
TACGCATCAGACTGCAGAGT+GGG 0.567158 5_2:+9411356 Msa0755580:three_prime_UTR
TTCCGCATTAAAATTTGAGT+AGG 0.567816 5_2:-9409861 None:intergenic
ACTTATTATTAGTACTCAGT+GGG 0.568638 5_2:-9410455 None:intergenic
TTCTGTCTAGTGCAAATGGA+GGG 0.570441 5_2:-9410216 None:intergenic
TTTGGGTACTTGCGATCCCG+TGG 0.573459 5_2:-9408819 None:intergenic
ATATCCTATCAACTCTTCAT+CGG 0.573542 5_2:-9407984 None:intergenic
TTCATCAAATAAAAGACTAA+GGG 0.574168 5_2:+9410526 Msa0755580:three_prime_UTR
CTCGATAACTCATGTTGCTG+TGG 0.576057 5_2:-9409785 None:intergenic
TGGTCAAATCCAGCCATAGG+AGG 0.577334 5_2:-9409371 None:intergenic
TCAGTGGAAATGAATGGACT+AGG 0.578648 5_2:-9408918 None:intergenic
TAGAGCTTCATGAAGATGAT+CGG 0.579444 5_2:+9411056 Msa0755580:three_prime_UTR
CATTTCAACCAATGGGAACG+AGG 0.580432 5_2:+9409271 Msa0755580:CDS
GTTGGATGGAAACGAAAACC+TGG 0.583973 5_2:-9407962 None:intergenic
ACAGTCTCAGTGGAAATGAA+TGG 0.584355 5_2:-9408924 None:intergenic
CAATTGGTTCGATCACCTAA+AGG 0.588285 5_2:-9408990 None:intergenic
TGATGATCCTAGCCAAGGCT+CGG 0.588446 5_2:+9409037 Msa0755580:CDS
GCTTGGTCAAATCCAGCCAT+AGG 0.594904 5_2:-9409374 None:intergenic
AGAATCAAGAATCATGTCAT+GGG 0.595091 5_2:-9409432 None:intergenic
GCTGGCTACTGGAAAGCCAC+AGG 0.598108 5_2:+9408870 Msa0755580:CDS
GGAAAGCCACAGGAAAAGAC+AGG 0.599029 5_2:+9408880 Msa0755580:CDS
TCTGCTGCAACCCTTATGCA+TGG 0.600193 5_2:+9411150 Msa0755580:three_prime_UTR
TGCAGTCGAAGGAAAACGAA+AGG 0.603800 5_2:-9410828 Msa0755590:CDS
AGATTCATTAATGCAGTCGA+AGG 0.607766 5_2:-9410839 Msa0755590:CDS
CTCAATGATGATCCTAGCCA+AGG 0.611417 5_2:+9409032 Msa0755580:CDS
TACTTATTATTAGTACTCAG+TGG 0.611777 5_2:-9410456 None:intergenic
CAAGTTACAAGATGTTTCAG+TGG 0.612949 5_2:+9410059 Msa0755580:three_prime_UTR
CGAAGGACAAGGAGGAAAGA+GGG 0.614265 5_2:+9409223 Msa0755580:CDS
AAATTTGAGTAGGATGAACA+AGG 0.615587 5_2:-9409851 None:intergenic
CTATAAAAGTGATATCATCC+GGG 0.616117 5_2:-9410303 None:intergenic
TATCGAGTACAATCTCAACT+TGG 0.616686 5_2:+9409801 Msa0755580:CDS
GCAAATGATTCCGAAGGACA+AGG 0.617621 5_2:+9409212 Msa0755580:CDS
AGAGTATTTCGGGAGAGCAA+TGG 0.619871 5_2:+9411079 Msa0755580:three_prime_UTR
CATGTCATGGGAGAGCCAGA+AGG 0.622804 5_2:-9409420 None:intergenic
GAGAAGGCAAATGATTCCGA+AGG 0.623623 5_2:+9409206 Msa0755580:CDS
ATGTCACCTTATTCAGGACA+AGG 0.624913 5_2:+9409920 Msa0755580:CDS
GCTGCTGCACAAGTTGGTCA+AGG 0.626016 5_2:-9410943 Msa0755590:CDS
ACATAGAAATATAGAATGGG+AGG 0.627145 5_2:+9407926 Msa0755580:exon
GGTACTGTCACAAATTTCCA+TGG 0.628747 5_2:-9411541 Msa0755590:CDS
AGAGGGTTAGAGCTAATGAT+GGG 0.630099 5_2:+9409240 Msa0755580:CDS
TGAACCTATCTCCACCCCAA+AGG 0.632778 5_2:-9407673 None:intergenic
GGTCAAATCCAGCCATAGGA+GGG 0.633856 5_2:-9409370 None:intergenic
TTTCTGTCTAGTGCAAATGG+AGG 0.640935 5_2:-9410217 None:intergenic
GACATGCAACCAATTTGGCT+AGG 0.642381 5_2:-9409902 None:intergenic
TCTAAATCAAGACATAGTCA+AGG 0.644103 5_2:-9411824 Msa0755590:intron
GACCTACCAGGTAACTCCCA+AGG 0.644578 5_2:-9408082 None:intergenic
CAGATGATTTGATATCTCCA+GGG 0.645408 5_2:+9411751 Msa0755580:three_prime_UTR
TGGAGATATCAAATCATCTG+AGG 0.646682 5_2:-9411748 Msa0755590:CDS
ACAGTCTTAAACTTACAAGC+CGG 0.651144 5_2:+9411380 Msa0755580:three_prime_UTR
CTTGGCTAGGATCATCATTG+AGG 0.653192 5_2:-9409031 None:intergenic
AGAGTTAAATGACACTTCAA+CGG 0.653873 5_2:-9407754 None:intergenic
TCTGAGGATCCCATATACAA+AGG 0.659738 5_2:-9411732 Msa0755590:CDS
TATGCATGGATCCTTGAACA+TGG 0.660343 5_2:+9411164 Msa0755580:three_prime_UTR
ACATACACGGATTTCTGAGA+CGG 0.664223 5_2:+9410141 Msa0755580:three_prime_UTR
ATATGTTATAACAGGAACCC+CGG 0.665430 5_2:+9411237 Msa0755580:three_prime_UTR
CACTAGTCTTGAATTCTCTG+AGG 0.665482 5_2:-9410770 Msa0755590:CDS
CAGGCAAGTCAACTATTGAG+TGG 0.665687 5_2:+9409302 Msa0755580:CDS
ACTAGCAGGACTATTCTCAA+GGG 0.665974 5_2:+9409735 Msa0755580:intron
ATGCAAGAAGACTACATACA+CGG 0.667220 5_2:+9410128 Msa0755580:three_prime_UTR
TTCCGCGACACATCAACTCG+AGG 0.668844 5_2:+9410601 Msa0755580:three_prime_UTR
AACCTCGAGTTGATGTGTCG+CGG 0.672079 5_2:-9410603 Msa0755590:CDS
AGCCACAGGAAAAGACAGGA+AGG 0.673089 5_2:+9408884 Msa0755580:CDS
GTAACCTGTGACAGTCTCAG+TGG 0.678126 5_2:-9408934 None:intergenic
TCAAACACAGCCGGATACGT+AGG 0.678958 5_2:-9411296 Msa0755590:intron
ACAGCCATGTAGAGCAACCA+CGG 0.689758 5_2:+9411472 Msa0755580:three_prime_UTR
TGATCCTAGCCAAGGCTCGG+AGG 0.696143 5_2:+9409040 Msa0755580:CDS
TCGCCAATTCGGCTACACCG+TGG 0.698242 5_2:-9411489 Msa0755590:CDS
TTGGAACCTAAGAAGAGACG+AGG 0.710005 5_2:+9411003 Msa0755580:three_prime_UTR
CTACGCATCAGACTGCAGAG+TGG 0.715113 5_2:+9411355 Msa0755580:three_prime_UTR
AATGATTCCGAAGGACAAGG+AGG 0.715890 5_2:+9409215 Msa0755580:CDS
TGATATTGTTGTGACTTGTG+AGG 0.758451 5_2:-9410626 Msa0755590:CDS
GGATGGAAACGAAAACCTGG+AGG 0.767680 5_2:-9407959 None:intergenic
AGTTACAAGATGTTTCAGTG+GGG 0.791907 5_2:+9410061 Msa0755580:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCCATTATTTAATTTTAA+GGG - chr5_2:9408551-9408570 None:intergenic 10.0%
!!! TTTTCCATTATTTAATTTTA+AGG - chr5_2:9408552-9408571 None:intergenic 10.0%
!!! TAGACAAAAGTTTTTATTTT+TGG + chr5_2:9407794-9407813 Msa0755580:five_prime_UTR 15.0%
!!! ATTAACTTTTGAAAACTTTT+AGG + chr5_2:9408272-9408291 Msa0755580:intron 15.0%
!! TAACCCTTAAAATTAAATAA+TGG + chr5_2:9408545-9408564 Msa0755580:intron 15.0%
!! CATAAAAATAGCTTATATAA+TGG + chr5_2:9410371-9410390 Msa0755580:three_prime_UTR 15.0%
!! TAATGAATATATGTTATAAC+AGG + chr5_2:9411229-9411248 Msa0755580:three_prime_UTR 15.0%
!!! TTTGGTTTATTTTAACTTCT+AGG + chr5_2:9407533-9407552 Msa0755580:five_prime_UTR 20.0%
!!! AAACTGTTTCTTTTTTTTCT+TGG + chr5_2:9407580-9407599 Msa0755580:five_prime_UTR 20.0%
!!! TTGTTTTAATACAATGATTC+TGG + chr5_2:9407714-9407733 Msa0755580:five_prime_UTR 20.0%
!!! TTTTTGGATTTTTCAGATTA+TGG + chr5_2:9407810-9407829 Msa0755580:five_prime_UTR 20.0%
!!! AAGTGAAACTGAAAATATTT+TGG - chr5_2:9407870-9407889 None:intergenic 20.0%
!!! TTTTGGTTTTAATAGTAGTA+AGG + chr5_2:9407902-9407921 Msa0755580:five_prime_UTR 20.0%
!! AATTTGTAGAATTCAATAAC+AGG - chr5_2:9408058-9408077 None:intergenic 20.0%
!!! TAATATGTTTTCTTTAGAGT+TGG + chr5_2:9408659-9408678 Msa0755580:intron 20.0%
!!! AATATGTTTTCTTTAGAGTT+GGG + chr5_2:9408660-9408679 Msa0755580:intron 20.0%
!!! TCTCATTCTTTTTAATAACT+CGG - chr5_2:9409190-9409209 None:intergenic 20.0%
!! AGTTATTAAAAAGAATGAGA+AGG + chr5_2:9409190-9409209 Msa0755580:CDS 20.0%
!! TCTAACATAAAGTTAGAATT+TGG + chr5_2:9409509-9409528 Msa0755580:intron 20.0%
!! TGTAATTTATTATGTTGTGT+AGG + chr5_2:9410277-9410296 Msa0755580:three_prime_UTR 20.0%
!! ATTCATCAAATAAAAGACTA+AGG + chr5_2:9410525-9410544 Msa0755580:three_prime_UTR 20.0%
!! TTCATCAAATAAAAGACTAA+GGG + chr5_2:9410526-9410545 Msa0755580:three_prime_UTR 20.0%
!! AATTAAAATTAACCTAGAGA+TGG + chr5_2:9411651-9411670 Msa0755580:intron 20.0%
!! ATTCTTATAACCTTTGTATA+TGG + chr5_2:9411722-9411741 Msa0755580:three_prime_UTR 20.0%
!! TTCTTATAACCTTTGTATAT+GGG + chr5_2:9411723-9411742 Msa0755580:three_prime_UTR 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG - chr5_2:9411789-9411808 Msa0755590:CDS 20.0%
! AAAATAAACCAAAGAGAAAG+TGG - chr5_2:9407526-9407545 None:intergenic 25.0%
!!! TTTGGTACATTTTTTCCTTT+GGG + chr5_2:9407658-9407677 Msa0755580:five_prime_UTR 25.0%
!!! CACTTGTGTTTTTTTGTTTT+TGG + chr5_2:9407885-9407904 Msa0755580:five_prime_UTR 25.0%
! AGGAACATAGAAATATAGAA+TGG + chr5_2:9407922-9407941 Msa0755580:exon 25.0%
! GGAACATAGAAATATAGAAT+GGG + chr5_2:9407923-9407942 Msa0755580:exon 25.0%
! TTACCTAAAAAGAAAAGTTG+AGG + chr5_2:9408006-9408025 Msa0755580:CDS 25.0%
! TACCTAAAAAGAAAAGTTGA+GGG + chr5_2:9408007-9408026 Msa0755580:CDS 25.0%
! AATTCTACAAATTTGATCCT+TGG + chr5_2:9408065-9408084 Msa0755580:CDS 25.0%
! ATTCTACAAATTTGATCCTT+GGG + chr5_2:9408066-9408085 Msa0755580:CDS 25.0%
! ACACGATTAATCACAAAATT+CGG - chr5_2:9408618-9408637 None:intergenic 25.0%
! TTTAAGAGAACTCTAATTTG+TGG + chr5_2:9408727-9408746 Msa0755580:intron 25.0%
!! TTAAGAGAACTCTAATTTGT+GGG + chr5_2:9408728-9408747 Msa0755580:intron 25.0%
!!! ATCCTACTCAAATTTTAATG+CGG + chr5_2:9409859-9409878 Msa0755580:CDS 25.0%
!!! CTTTGTTTTCAGAATTGATT+TGG - chr5_2:9410001-9410020 None:intergenic 25.0%
!! ATCAATTCTGAAAACAAAGA+AGG + chr5_2:9410002-9410021 Msa0755580:exon 25.0%
! AGTTAAACAAAAGATGTGAA+TGG + chr5_2:9410101-9410120 Msa0755580:three_prime_UTR 25.0%
! TCTATAAAAGTGATATCATC+CGG - chr5_2:9410307-9410326 None:intergenic 25.0%
! TTATAGATTTCATCCGAATT+TGG + chr5_2:9410320-9410339 Msa0755580:three_prime_UTR 25.0%
!!! AATAGCTTATATAATGGATG+AGG + chr5_2:9410377-9410396 Msa0755580:three_prime_UTR 25.0%
! ACTTATTATTAGTACTCAGT+GGG - chr5_2:9410458-9410477 None:intergenic 25.0%
! TACTTATTATTAGTACTCAG+TGG - chr5_2:9410459-9410478 None:intergenic 25.0%
!!! AAAATTGGATCTTGTTATTG+AGG - chr5_2:9410704-9410723 Msa0755590:CDS 25.0%
!!! TATTTGTTTTCTTTTGAACC+GGG - chr5_2:9411258-9411277 Msa0755590:intron 25.0%
!!! GTATTTGTTTTCTTTTGAAC+CGG - chr5_2:9411259-9411278 Msa0755590:intron 25.0%
!! CAAAGGTTATAAGAATGTTT+TGG - chr5_2:9411718-9411737 Msa0755590:CDS 25.0%
! TGTCTTGATTTAGATTTACA+AGG + chr5_2:9411833-9411852 Msa0755580:three_prime_UTR 25.0%
!! CAAAAGTGAAGGCTTTAAAA+AGG - chr5_2:9407559-9407578 None:intergenic 30.0%
GTGTGTAATATTCCTAAGTT+TGG + chr5_2:9407640-9407659 Msa0755580:five_prime_UTR 30.0%
GGAAAAAATGTACCAAACTT+AGG - chr5_2:9407655-9407674 None:intergenic 30.0%
!!! GTTTGGTACATTTTTTCCTT+TGG + chr5_2:9407657-9407676 Msa0755580:five_prime_UTR 30.0%
!!! TTGGTACATTTTTTCCTTTG+GGG + chr5_2:9407659-9407678 Msa0755580:five_prime_UTR 30.0%
AGAGTTAAATGACACTTCAA+CGG - chr5_2:9407757-9407776 None:intergenic 30.0%
!! GGATTTTTCAGATTATGGAT+AGG + chr5_2:9407815-9407834 Msa0755580:five_prime_UTR 30.0%
ACATAGAAATATAGAATGGG+AGG + chr5_2:9407926-9407945 Msa0755580:exon 30.0%
ATATCCTATCAACTCTTCAT+CGG - chr5_2:9407987-9408006 None:intergenic 30.0%
ACAACAAATAGGAGGATTTA+AGG + chr5_2:9408442-9408461 Msa0755580:intron 30.0%
!!! TTGTTTTGAGCTAACTACTA+AGG + chr5_2:9408701-9408720 Msa0755580:intron 30.0%
! TAAGAGAACTCTAATTTGTG+GGG + chr5_2:9408729-9408748 Msa0755580:intron 30.0%
! AACCATTCCATATCTCTTTT+TGG - chr5_2:9408789-9408808 None:intergenic 30.0%
TATTTGTCCTTGAACCATTT+GGG - chr5_2:9408839-9408858 None:intergenic 30.0%
TCTTCCACAGTAAAAAACTA+GGG - chr5_2:9408967-9408986 None:intergenic 30.0%
TTCTTATTGATCACTGTTGT+AGG + chr5_2:9409148-9409167 Msa0755580:intron 30.0%
TCTTATTGATCACTGTTGTA+GGG + chr5_2:9409149-9409168 Msa0755580:intron 30.0%
ACATTGCATTGGAAGTTAAT+AGG - chr5_2:9409350-9409369 None:intergenic 30.0%
AGAATCAAGAATCATGTCAT+GGG - chr5_2:9409435-9409454 None:intergenic 30.0%
AAGAATCAAGAATCATGTCA+TGG - chr5_2:9409436-9409455 None:intergenic 30.0%
CATGATTCTTGATTCTTCAA+AGG + chr5_2:9409439-9409458 Msa0755580:CDS 30.0%
AACTAATATCTACATGTGTC+TGG - chr5_2:9409682-9409701 None:intergenic 30.0%
AAATTTGAGTAGGATGAACA+AGG - chr5_2:9409854-9409873 None:intergenic 30.0%
TTCCGCATTAAAATTTGAGT+AGG - chr5_2:9409864-9409883 None:intergenic 30.0%
ATCTGATCATAGCATTCATA+AGG - chr5_2:9409962-9409981 None:intergenic 30.0%
ATGATCAGATTCATTCATTC+AGG + chr5_2:9409972-9409991 Msa0755580:CDS 30.0%
TCTGAAAACAAAGAAGGAAT+AGG + chr5_2:9410008-9410027 Msa0755580:exon 30.0%
AAGTTACAAGATGTTTCAGT+GGG + chr5_2:9410060-9410079 Msa0755580:three_prime_UTR 30.0%
ACTCAAAGACAGACATTAAA+AGG - chr5_2:9410169-9410188 None:intergenic 30.0%
CTATAAAAGTGATATCATCC+GGG - chr5_2:9410306-9410325 None:intergenic 30.0%
! CATCCGAATTTGGTTTATAT+CGG + chr5_2:9410330-9410349 Msa0755580:three_prime_UTR 30.0%
TGACCGATATAAACCAAATT+CGG - chr5_2:9410336-9410355 None:intergenic 30.0%
TCATGATCAATTTACTCAGT+AGG - chr5_2:9410420-9410439 None:intergenic 30.0%
! ATAGCAATTTTACTCAACTG+AGG + chr5_2:9410793-9410812 Msa0755580:three_prime_UTR 30.0%
!! ATTTGTTTTCTTTTGAACCG+GGG - chr5_2:9411257-9411276 Msa0755590:intron 30.0%
TTGAACACAAGATTTGATCT+CGG + chr5_2:9411315-9411334 Msa0755580:three_prime_UTR 30.0%
TTAATCCCTTAAATTGTGAC+CGG - chr5_2:9411402-9411421 Msa0755590:intron 30.0%
TTAATACATTCCTTCGAATG+AGG - chr5_2:9411633-9411652 Msa0755590:intron 30.0%
AAAATCCATTGATGAAACAC+TGG - chr5_2:9411691-9411710 Msa0755590:CDS 30.0%
TCTAAATCAAGACATAGTCA+AGG - chr5_2:9411827-9411846 Msa0755590:intron 30.0%
GAAACAGTTTGCAAAAGTGA+AGG - chr5_2:9407570-9407589 None:intergenic 35.0%
!! ACAATGATTCTGGAGCATAA+TGG + chr5_2:9407724-9407743 Msa0755580:five_prime_UTR 35.0%
ATGGATAGGTATAGTACTCT+TGG + chr5_2:9407829-9407848 Msa0755580:five_prime_UTR 35.0%
! GTCCCTCAACTTTTCTTTTT+AGG - chr5_2:9408012-9408031 None:intergenic 35.0%
TCACATATTGATCAGTTGCA+TGG + chr5_2:9408115-9408134 Msa0755580:intron 35.0%
! AACTTTTAGGCTGTAAAAGC+CGG + chr5_2:9408285-9408304 Msa0755580:intron 35.0%
CTAAAATAATCCCGTTGAAC+CGG - chr5_2:9408307-9408326 None:intergenic 35.0%
TTTCCTGCCAAAAAGAGATA+TGG + chr5_2:9408779-9408798 Msa0755580:CDS 35.0%
!! ATTCCATATCTCTTTTTGGC+AGG - chr5_2:9408785-9408804 None:intergenic 35.0%
TGCCAAAAAGAGATATGGAA+TGG + chr5_2:9408784-9408803 Msa0755580:CDS 35.0%
! AATGGTTTTTCTTCTGTCCA+CGG + chr5_2:9408802-9408821 Msa0755580:CDS 35.0%
CTATTTGTCCTTGAACCATT+TGG - chr5_2:9408840-9408859 None:intergenic 35.0%
AGTAAAAAACTAGGGTCTTG+CGG - chr5_2:9408959-9408978 None:intergenic 35.0%
!!! AAGACCCTAGTTTTTTACTG+TGG + chr5_2:9408960-9408979 Msa0755580:CDS 35.0%
CTCTTCCACAGTAAAAAACT+AGG - chr5_2:9408968-9408987 None:intergenic 35.0%
TTTAGGTGATCGAACCAATT+GGG + chr5_2:9408992-9409011 Msa0755580:CDS 35.0%
ATATTCATGCATGACCCAAT+TGG - chr5_2:9409009-9409028 None:intergenic 35.0%
AGCAATTCCATTTCAACCAA+TGG + chr5_2:9409263-9409282 Msa0755580:CDS 35.0%
GCAATTCCATTTCAACCAAT+GGG + chr5_2:9409264-9409283 Msa0755580:CDS 35.0%
TATCGAGTACAATCTCAACT+TGG + chr5_2:9409801-9409820 Msa0755580:CDS 35.0%
AAACTTCCTTGTCCTGAATA+AGG - chr5_2:9409929-9409948 None:intergenic 35.0%
CAAGTTACAAGATGTTTCAG+TGG + chr5_2:9410059-9410078 Msa0755580:three_prime_UTR 35.0%
AGTTACAAGATGTTTCAGTG+GGG + chr5_2:9410061-9410080 Msa0755580:three_prime_UTR 35.0%
ATGCAAGAAGACTACATACA+CGG + chr5_2:9410128-9410147 Msa0755580:three_prime_UTR 35.0%
TAGTTTCTGTCTAGTGCAAA+TGG - chr5_2:9410223-9410242 None:intergenic 35.0%
ATTATGTTGTGTAGGTTTCC+CGG + chr5_2:9410285-9410304 Msa0755580:three_prime_UTR 35.0%
TATATCGGTCATTGTATGTG+TGG + chr5_2:9410345-9410364 Msa0755580:three_prime_UTR 35.0%
GTCTATTCAATTCCATGAGA+AGG + chr5_2:9410571-9410590 Msa0755580:three_prime_UTR 35.0%
! TGATATTGTTGTGACTTGTG+AGG - chr5_2:9410629-9410648 Msa0755590:CDS 35.0%
!! TGCTTTAAAGAGTTTAGAGC+TGG - chr5_2:9410655-9410674 Msa0755590:CDS 35.0%
TTGAGGAAGTTGAAGAACTT+GGG - chr5_2:9410687-9410706 Msa0755590:CDS 35.0%
ATTGAGGAAGTTGAAGAACT+TGG - chr5_2:9410688-9410707 Msa0755590:CDS 35.0%
TGTGGAAACAGTTGCAAAAT+TGG - chr5_2:9410719-9410738 Msa0755590:CDS 35.0%
AAAGATGCAAAAGCAGCAAA+AGG + chr5_2:9410742-9410761 Msa0755580:three_prime_UTR 35.0%
AGATTCATTAATGCAGTCGA+AGG - chr5_2:9410842-9410861 Msa0755590:CDS 35.0%
!! GTCAGTTTTAACACTCGATA+AGG + chr5_2:9410894-9410913 Msa0755580:three_prime_UTR 35.0%
TAGAGCTTCATGAAGATGAT+CGG + chr5_2:9411056-9411075 Msa0755580:three_prime_UTR 35.0%
!! AAGATGATCGGAGAGTATTT+CGG + chr5_2:9411068-9411087 Msa0755580:three_prime_UTR 35.0%
ATATGTTATAACAGGAACCC+CGG + chr5_2:9411237-9411256 Msa0755580:three_prime_UTR 35.0%
ACAGTCTTAAACTTACAAGC+CGG + chr5_2:9411380-9411399 Msa0755580:three_prime_UTR 35.0%
! CTGTTTGAGATCAGAAATTC+AGG - chr5_2:9411456-9411475 Msa0755590:CDS 35.0%
TGGCAGCAATATGTAAAAGT+TGG - chr5_2:9411524-9411543 Msa0755590:CDS 35.0%
! ACTTTTACATATTGCTGCCA+TGG + chr5_2:9411524-9411543 Msa0755580:three_prime_UTR 35.0%
! ATATCGCTTCGGTATTGAAT+TGG - chr5_2:9411605-9411624 Msa0755590:intron 35.0%
ATGAGGATCTTATATCGCTT+CGG - chr5_2:9411616-9411635 Msa0755590:intron 35.0%
GATATAAGATCCTCATTCGA+AGG + chr5_2:9411620-9411639 Msa0755580:intron 35.0%
ACTAACCAGTGTTTCATCAA+TGG + chr5_2:9411683-9411702 Msa0755580:intron 35.0%
TGGAGATATCAAATCATCTG+AGG - chr5_2:9411751-9411770 Msa0755590:CDS 35.0%
TCAGATGATTTGATATCTCC+AGG + chr5_2:9411750-9411769 Msa0755580:three_prime_UTR 35.0%
CAGATGATTTGATATCTCCA+GGG + chr5_2:9411751-9411770 Msa0755580:three_prime_UTR 35.0%
ACCATTCACCACTTTCTCTT+TGG + chr5_2:9407515-9407534 Msa0755580:five_prime_UTR 40.0%
ACCAAAGAGAAAGTGGTGAA+TGG - chr5_2:9407519-9407538 None:intergenic 40.0%
!!! GTACATTTTTTCCTTTGGGG+TGG + chr5_2:9407662-9407681 Msa0755580:five_prime_UTR 40.0%
GAAATTGAAGATGACCTACC+AGG - chr5_2:9408097-9408116 None:intergenic 40.0%
ACGTAATGTAGCAGAGTGAA+TGG + chr5_2:9408409-9408428 Msa0755580:intron 40.0%
GAGCTCAAAGCACAACAAAT+AGG + chr5_2:9408431-9408450 Msa0755580:intron 40.0%
CTCAAAGCACAACAAATAGG+AGG + chr5_2:9408434-9408453 Msa0755580:intron 40.0%
! ATAGGAGGATTTAAGGTGTG+AGG + chr5_2:9408449-9408468 Msa0755580:intron 40.0%
! TAGGAGGATTTAAGGTGTGA+GGG + chr5_2:9408450-9408469 Msa0755580:intron 40.0%
! ATGGTTTTTCTTCTGTCCAC+GGG + chr5_2:9408803-9408822 Msa0755580:CDS 40.0%
! TCAGTGGAAATGAATGGACT+AGG - chr5_2:9408921-9408940 None:intergenic 40.0%
ACAGTCTCAGTGGAAATGAA+TGG - chr5_2:9408927-9408946 None:intergenic 40.0%
!! CAATTGGTTCGATCACCTAA+AGG - chr5_2:9408993-9409012 None:intergenic 40.0%
CTTTAGGTGATCGAACCAAT+TGG + chr5_2:9408991-9409010 Msa0755580:CDS 40.0%
AAGAGGGTTAGAGCTAATGA+TGG + chr5_2:9409239-9409258 Msa0755580:CDS 40.0%
AGAGGGTTAGAGCTAATGAT+GGG + chr5_2:9409240-9409259 Msa0755580:CDS 40.0%
ATACCAATCCTACAACCTTC+TGG + chr5_2:9409405-9409424 Msa0755580:CDS 40.0%
! TTTTTCCTCTTCCAACTAGC+AGG + chr5_2:9409721-9409740 Msa0755580:intron 40.0%
TTGAGAATAGTCCTGCTAGT+TGG - chr5_2:9409735-9409754 None:intergenic 40.0%
AACTAGCAGGACTATTCTCA+AGG + chr5_2:9409734-9409753 Msa0755580:intron 40.0%
ACTAGCAGGACTATTCTCAA+GGG + chr5_2:9409735-9409754 Msa0755580:intron 40.0%
GGGCAATTACAAGATGTTGT+TGG + chr5_2:9409755-9409774 Msa0755580:CDS 40.0%
AAGGTGACATGCAACCAATT+TGG - chr5_2:9409910-9409929 None:intergenic 40.0%
ATGTCACCTTATTCAGGACA+AGG + chr5_2:9409920-9409939 Msa0755580:CDS 40.0%
TTCAGGACAAGGAAGTTTCA+TGG + chr5_2:9409931-9409950 Msa0755580:CDS 40.0%
! ACATACACGGATTTCTGAGA+CGG + chr5_2:9410141-9410160 Msa0755580:three_prime_UTR 40.0%
TTCTGTCTAGTGCAAATGGA+GGG - chr5_2:9410219-9410238 None:intergenic 40.0%
TTTCTGTCTAGTGCAAATGG+AGG - chr5_2:9410220-9410239 None:intergenic 40.0%
! TGCTTTTGCATCTTTGCTTG+TGG - chr5_2:9410737-9410756 Msa0755590:CDS 40.0%
!! CACTAGTCTTGAATTCTCTG+AGG - chr5_2:9410773-9410792 Msa0755590:CDS 40.0%
ACTCTTCTGCATTGCTTGAT+TGG - chr5_2:9410876-9410895 Msa0755590:CDS 40.0%
! GTTTGAGCATGTTGTTTGCA+TGG + chr5_2:9410968-9410987 Msa0755580:three_prime_UTR 40.0%
TGCATGGTTGTGTTTGTGTT+TGG + chr5_2:9410984-9411003 Msa0755580:three_prime_UTR 40.0%
TCATCTTCATGAAGCTCTAC+AGG - chr5_2:9411055-9411074 Msa0755590:CDS 40.0%
!! AGATGATCGGAGAGTATTTC+GGG + chr5_2:9411069-9411088 Msa0755580:three_prime_UTR 40.0%
GTTCAAGGATCCATGCATAA+GGG - chr5_2:9411163-9411182 Msa0755590:CDS 40.0%
TGTTCAAGGATCCATGCATA+AGG - chr5_2:9411164-9411183 Msa0755590:CDS 40.0%
TATGCATGGATCCTTGAACA+TGG + chr5_2:9411164-9411183 Msa0755580:three_prime_UTR 40.0%
ATCAGTTAGAGCCATGTTCA+AGG - chr5_2:9411178-9411197 Msa0755590:CDS 40.0%
!! AACATGGCTCTAACTGATCT+TGG + chr5_2:9411180-9411199 Msa0755580:three_prime_UTR 40.0%
ATCTTGTGTTCAAACACAGC+CGG - chr5_2:9411308-9411327 Msa0755590:intron 40.0%
CAAGATTTGATCTCGGAGTT+CGG + chr5_2:9411322-9411341 Msa0755580:three_prime_UTR 40.0%
TACAAGCCGGTCACAATTTA+AGG + chr5_2:9411393-9411412 Msa0755580:three_prime_UTR 40.0%
ACAAGCCGGTCACAATTTAA+GGG + chr5_2:9411394-9411413 Msa0755580:three_prime_UTR 40.0%
GGTACTGTCACAAATTTCCA+TGG - chr5_2:9411544-9411563 Msa0755590:CDS 40.0%
TCTGAGGATCCCATATACAA+AGG - chr5_2:9411735-9411754 Msa0755590:CDS 40.0%
! TATGGAGAAATTGATAGCCC+TGG - chr5_2:9411771-9411790 Msa0755590:CDS 40.0%
!!! TTTTCCTTTGGGGTGGAGAT+AGG + chr5_2:9407669-9407688 Msa0755580:five_prime_UTR 45.0%
GTTGGATGGAAACGAAAACC+TGG - chr5_2:9407965-9407984 None:intergenic 45.0%
! TCAACTCTTCATCGGTTGGA+TGG - chr5_2:9407979-9407998 None:intergenic 45.0%
CCTATCAACTCTTCATCGGT+TGG - chr5_2:9407983-9408002 None:intergenic 45.0%
! CCAACCGATGAAGAGTTGAT+AGG + chr5_2:9407980-9407999 Msa0755580:CDS 45.0%
TTTGATCCTTGGGAGTTACC+TGG + chr5_2:9408076-9408095 Msa0755580:CDS 45.0%
! AGGAGGATTTAAGGTGTGAG+GGG + chr5_2:9408451-9408470 Msa0755580:intron 45.0%
AAGCCTTGGAATACGGTTCA+GGG + chr5_2:9408476-9408495 Msa0755580:intron 45.0%
TACCTCAACCAGCCTATTGT+CGG + chr5_2:9408574-9408593 Msa0755580:intron 45.0%
GTGTCTACTTCTCCGACAAT+AGG - chr5_2:9408589-9408608 None:intergenic 45.0%
GTCGGAGAAGTAGACACTAT+TGG + chr5_2:9408592-9408611 Msa0755580:intron 45.0%
GCAAGTACCCAAATGGTTCA+AGG + chr5_2:9408829-9408848 Msa0755580:CDS 45.0%
ACAAATAGAGCCACCAAAGC+TGG + chr5_2:9408852-9408871 Msa0755580:CDS 45.0%
! AACCTTCCTGTCTTTTCCTG+TGG - chr5_2:9408889-9408908 None:intergenic 45.0%
ATTTCCACTGAGACTGTCAC+AGG + chr5_2:9408930-9408949 Msa0755580:CDS 45.0%
TACTGTGGAAGAGCTCCTTT+AGG + chr5_2:9408975-9408994 Msa0755580:CDS 45.0%
CTTGGCTAGGATCATCATTG+AGG - chr5_2:9409034-9409053 None:intergenic 45.0%
CTCAATGATGATCCTAGCCA+AGG + chr5_2:9409032-9409051 Msa0755580:CDS 45.0%
GAGAAGGCAAATGATTCCGA+AGG + chr5_2:9409206-9409225 Msa0755580:CDS 45.0%
GCAAATGATTCCGAAGGACA+AGG + chr5_2:9409212-9409231 Msa0755580:CDS 45.0%
AATGATTCCGAAGGACAAGG+AGG + chr5_2:9409215-9409234 Msa0755580:CDS 45.0%
! CTCGTTCCCATTGGTTGAAA+TGG - chr5_2:9409273-9409292 None:intergenic 45.0%
CATTTCAACCAATGGGAACG+AGG + chr5_2:9409271-9409290 Msa0755580:CDS 45.0%
ACAAGAAACCTCGTTCCCAT+TGG - chr5_2:9409282-9409301 None:intergenic 45.0%
CAGGCAAGTCAACTATTGAG+TGG + chr5_2:9409302-9409321 Msa0755580:CDS 45.0%
GATTGGTATCAGAGGAAGCT+TGG - chr5_2:9409394-9409413 None:intergenic 45.0%
! GGTTGTAGGATTGGTATCAG+AGG - chr5_2:9409402-9409421 None:intergenic 45.0%
!! TCTACATGTGTCTGGTTCTG+CGG - chr5_2:9409674-9409693 None:intergenic 45.0%
ATAGTCCTGCTAGTTGGAAG+AGG - chr5_2:9409729-9409748 None:intergenic 45.0%
CTCGATAACTCATGTTGCTG+TGG - chr5_2:9409788-9409807 None:intergenic 45.0%
GACATGCAACCAATTTGGCT+AGG - chr5_2:9409905-9409924 None:intergenic 45.0%
GGTTGCATGTCACCTTATTC+AGG + chr5_2:9409914-9409933 Msa0755580:CDS 45.0%
CGGAACAATTTGCCTTCTCA+TGG - chr5_2:9410586-9410605 Msa0755590:CDS 45.0%
TGCAGTCGAAGGAAAACGAA+AGG - chr5_2:9410831-9410850 Msa0755590:CDS 45.0%
GGTCAAGGTAGACATGGAAA+AGG - chr5_2:9410931-9410950 Msa0755590:CDS 45.0%
!! CAAGTTGGTCAAGGTAGACA+TGG - chr5_2:9410937-9410956 Msa0755590:CDS 45.0%
AAACTAGCTGCTGCACAAGT+TGG - chr5_2:9410952-9410971 Msa0755590:CDS 45.0%
TTGGAACCTAAGAAGAGACG+AGG + chr5_2:9411003-9411022 Msa0755580:three_prime_UTR 45.0%
TCTCAACCTCGTCTCTTCTT+AGG - chr5_2:9411012-9411031 Msa0755590:CDS 45.0%
GAGACGAGGTTGAGACTTTA+TGG + chr5_2:9411017-9411036 Msa0755580:three_prime_UTR 45.0%
! AGAGTATTTCGGGAGAGCAA+TGG + chr5_2:9411079-9411098 Msa0755580:three_prime_UTR 45.0%
GCGACAGTTTCTTATGCTGT+TGG + chr5_2:9411101-9411120 Msa0755580:three_prime_UTR 45.0%
GCAAATAGTGCCTACGTATC+CGG + chr5_2:9411286-9411305 Msa0755580:three_prime_UTR 45.0%
TGACAGTACCTAGAATGCCT+TGG + chr5_2:9411554-9411573 Msa0755580:three_prime_UTR 45.0%
AGTCTCTATGTGCCATCTCT+AGG - chr5_2:9411666-9411685 Msa0755590:intron 45.0%
TGAACCTATCTCCACCCCAA+AGG - chr5_2:9407676-9407695 None:intergenic 50.0%
GGATGGAAACGAAAACCTGG+AGG - chr5_2:9407962-9407981 None:intergenic 50.0%
ATCCTTGGGAGTTACCTGGT+AGG + chr5_2:9408080-9408099 Msa0755580:intron 50.0%
! GGCTGTAAAAGCCGGTTCAA+CGG + chr5_2:9408293-9408312 Msa0755580:intron 50.0%
! GCTGTAAAAGCCGGTTCAAC+GGG + chr5_2:9408294-9408313 Msa0755580:intron 50.0%
AGGGGTGAAGCCTTGGAATA+CGG + chr5_2:9408469-9408488 Msa0755580:intron 50.0%
GAAGCCTTGGAATACGGTTC+AGG + chr5_2:9408475-9408494 Msa0755580:intron 50.0%
AGCCTTGGAATACGGTTCAG+GGG + chr5_2:9408477-9408496 Msa0755580:intron 50.0%
TACCCCTGAACCGTATTCCA+AGG - chr5_2:9408482-9408501 None:intergenic 50.0%
CTACTTCTCCGACAATAGGC+TGG - chr5_2:9408585-9408604 None:intergenic 50.0%
! TTTCCAGTAGCCAGCTTTGG+TGG - chr5_2:9408865-9408884 None:intergenic 50.0%
GGAAAGCCACAGGAAAAGAC+AGG + chr5_2:9408880-9408899 Msa0755580:CDS 50.0%
AGCCACAGGAAAAGACAGGA+AGG + chr5_2:9408884-9408903 Msa0755580:CDS 50.0%
GTAACCTGTGACAGTCTCAG+TGG - chr5_2:9408937-9408956 None:intergenic 50.0%
TGATGATCCTAGCCAAGGCT+CGG + chr5_2:9409037-9409056 Msa0755580:CDS 50.0%
AGACATTTACCTCCGAGCCT+TGG - chr5_2:9409052-9409071 None:intergenic 50.0%
CCTCTTTCCTCCTTGTCCTT+CGG - chr5_2:9409225-9409244 None:intergenic 50.0%
CGAAGGACAAGGAGGAAAGA+GGG + chr5_2:9409223-9409242 Msa0755580:CDS 50.0%
TGGGAACGAGGTTTCTTGTC+AGG + chr5_2:9409283-9409302 Msa0755580:CDS 50.0%
CCATAGGAGGGACATTGCAT+TGG - chr5_2:9409361-9409380 None:intergenic 50.0%
CCAATGCAATGTCCCTCCTA+TGG + chr5_2:9409358-9409377 Msa0755580:CDS 50.0%
GGTCAAATCCAGCCATAGGA+GGG - chr5_2:9409373-9409392 None:intergenic 50.0%
TGGTCAAATCCAGCCATAGG+AGG - chr5_2:9409374-9409393 None:intergenic 50.0%
GCTTGGTCAAATCCAGCCAT+AGG - chr5_2:9409377-9409396 None:intergenic 50.0%
GAGCCAGAAGGTTGTAGGAT+TGG - chr5_2:9409411-9409430 None:intergenic 50.0%
!! CCAATTTGGCTAGGAGTGTC+AGG - chr5_2:9409896-9409915 None:intergenic 50.0%
CCTGACACTCCTAGCCAAAT+TGG + chr5_2:9409893-9409912 Msa0755580:CDS 50.0%
!! AACCTCGAGTTGATGTGTCG+CGG - chr5_2:9410606-9410625 Msa0755590:CDS 50.0%
GGTAGACATGGAAAAGGCTC+TGG - chr5_2:9410925-9410944 Msa0755590:CDS 50.0%
ATGCATAAGGGTTGCAGCAG+AGG - chr5_2:9411151-9411170 Msa0755590:CDS 50.0%
TCTGCTGCAACCCTTATGCA+TGG + chr5_2:9411150-9411169 Msa0755580:three_prime_UTR 50.0%
TCAAACACAGCCGGATACGT+AGG - chr5_2:9411299-9411318 Msa0755590:intron 50.0%
GTCTGATGCGTAGGCACAAT+TGG - chr5_2:9411348-9411367 Msa0755590:intron 50.0%
TACGCATCAGACTGCAGAGT+GGG + chr5_2:9411356-9411375 Msa0755580:three_prime_UTR 50.0%
ACAGCCATGTAGAGCAACCA+CGG + chr5_2:9411472-9411491 Msa0755580:three_prime_UTR 50.0%
TACACCGTGGTTGCTCTACA+TGG - chr5_2:9411479-9411498 Msa0755590:CDS 50.0%
GGAGCTGTTCTTCGCCAATT+CGG - chr5_2:9411503-9411522 Msa0755590:CDS 50.0%
! GCTTCGGTATTGAATTGGCC+AGG - chr5_2:9411600-9411619 Msa0755590:intron 50.0%
GACCTACCAGGTAACTCCCA+AGG - chr5_2:9408085-9408104 None:intergenic 55.0%
! CTCCGACAATAGGCTGGTTG+AGG - chr5_2:9408579-9408598 None:intergenic 55.0%
TTTGGGTACTTGCGATCCCG+TGG - chr5_2:9408822-9408841 None:intergenic 55.0%
CGGGATCGCAAGTACCCAAA+TGG + chr5_2:9408822-9408841 Msa0755580:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr5_2:9408868-9408887 None:intergenic 55.0%
TTTACCTCCGAGCCTTGGCT+AGG - chr5_2:9409047-9409066 None:intergenic 55.0%
CCGAAGGACAAGGAGGAAAG+AGG + chr5_2:9409222-9409241 Msa0755580:CDS 55.0%
TGCAATGTCCCTCCTATGGC+TGG + chr5_2:9409362-9409381 Msa0755580:CDS 55.0%
TGGGAGAGCCAGAAGGTTGT+AGG - chr5_2:9409416-9409435 None:intergenic 55.0%
CATGTCATGGGAGAGCCAGA+AGG - chr5_2:9409423-9409442 None:intergenic 55.0%
TTCCGCGACACATCAACTCG+AGG + chr5_2:9410601-9410620 Msa0755580:three_prime_UTR 55.0%
!! GCTGCTGCACAAGTTGGTCA+AGG - chr5_2:9410946-9410965 Msa0755590:CDS 55.0%
CACTCTGCAGTCTGATGCGT+AGG - chr5_2:9411357-9411376 Msa0755590:intron 55.0%
CTACGCATCAGACTGCAGAG+TGG + chr5_2:9411355-9411374 Msa0755580:three_prime_UTR 55.0%
CAACCACGGTGTAGCCGAAT+TGG + chr5_2:9411486-9411505 Msa0755580:three_prime_UTR 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG - chr5_2:9411565-9411584 Msa0755590:CDS 55.0%
! TGCATGCAAGTTGGGAGCCA+AGG - chr5_2:9411574-9411593 Msa0755590:CDS 55.0%
! CCAGGCGTTGCATGCAAGTT+GGG - chr5_2:9411582-9411601 Msa0755590:intron 55.0%
AGGTGTGAGGGGTGAAGCCT+TGG + chr5_2:9408462-9408481 Msa0755580:intron 60.0%
GAGCCACCAAAGCTGGCTAC+TGG + chr5_2:9408859-9408878 Msa0755580:CDS 60.0%
GCTGGCTACTGGAAAGCCAC+AGG + chr5_2:9408870-9408889 Msa0755580:CDS 60.0%
TGATCCTAGCCAAGGCTCGG+AGG + chr5_2:9409040-9409059 Msa0755580:CDS 60.0%
TCGCCAATTCGGCTACACCG+TGG - chr5_2:9411492-9411511 Msa0755590:CDS 60.0%
CCCAACTTGCATGCAACGCC+TGG + chr5_2:9411579-9411598 Msa0755580:three_prime_UTR 60.0%
! GCCAGGCGTTGCATGCAAGT+TGG - chr5_2:9411583-9411602 Msa0755590:intron 60.0%
GGAGGAGCTTCACTGCCTCC+AGG + chr5_2:9407944-9407963 Msa0755580:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9407511 9411858 9407511 ID=Msa0755580;Name=Msa0755580
chr5_2 mRNA 9407511 9411858 9407511 ID=Msa0755580-mRNA-1;Parent=Msa0755580;Name=Msa0755580-mRNA-1;_AED=0.12;_eAED=0.12;_QI=430|1|1|1|0.75|0.6|5|1755|335
chr5_2 exon 9407511 9408097 9407511 ID=Msa0755580-mRNA-1:exon:4372;Parent=Msa0755580-mRNA-1
chr5_2 exon 9408772 9409061 9408772 ID=Msa0755580-mRNA-1:exon:4373;Parent=Msa0755580-mRNA-1
chr5_2 exon 9409170 9409460 9409170 ID=Msa0755580-mRNA-1:exon:4374;Parent=Msa0755580-mRNA-1
chr5_2 exon 9409743 9411600 9409743 ID=Msa0755580-mRNA-1:exon:4375;Parent=Msa0755580-mRNA-1
chr5_2 exon 9411692 9411858 9411692 ID=Msa0755580-mRNA-1:exon:4376;Parent=Msa0755580-mRNA-1
chr5_2 five_prime_UTR 9407511 9407940 9407511 ID=Msa0755580-mRNA-1:five_prime_utr;Parent=Msa0755580-mRNA-1
chr5_2 CDS 9407941 9408097 9407941 ID=Msa0755580-mRNA-1:cds;Parent=Msa0755580-mRNA-1
chr5_2 CDS 9408772 9409061 9408772 ID=Msa0755580-mRNA-1:cds;Parent=Msa0755580-mRNA-1
chr5_2 CDS 9409170 9409460 9409170 ID=Msa0755580-mRNA-1:cds;Parent=Msa0755580-mRNA-1
chr5_2 CDS 9409743 9410012 9409743 ID=Msa0755580-mRNA-1:cds;Parent=Msa0755580-mRNA-1
chr5_2 three_prime_UTR 9410013 9411600 9410013 ID=Msa0755580-mRNA-1:three_prime_utr;Parent=Msa0755580-mRNA-1
chr5_2 three_prime_UTR 9411692 9411858 9411692 ID=Msa0755580-mRNA-1:three_prime_utr;Parent=Msa0755580-mRNA-1
Gene Sequence

>Msa0755580

ATGGGAGGAGCTTCACTGCCTCCAGGTTTTCGTTTCCATCCAACCGATGAAGAGTTGATAGGATATTACCTAAAAAGAAAAGTTGAGGGACTTGAAATTGAGCTTGAAGTTATACCTGTTATTGAATTCTACAAATTTGATCCTTGGGAGTTACCTGAGAAATCTTTCCTGCCAAAAAGAGATATGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGTTCAAGGACAAATAGAGCCACCAAAGCTGGCTACTGGAAAGCCACAGGAAAAGACAGGAAGGTTGTGTGTGAGCCTAGTCCATTCATTTCCACTGAGACTGTCACAGGTTACCGCAAGACCCTAGTTTTTTACTGTGGAAGAGCTCCTTTAGGTGATCGAACCAATTGGGTCATGCATGAATATCGCCTCAATGATGATCCTAGCCAAGGCTCGGAGGGTGCTTTTGCTTTATGCCGAGTTATTAAAAAGAATGAGAAGGCAAATGATTCCGAAGGACAAGGAGGAAAGAGGGTTAGAGCTAATGATGGGAGCAATTCCATTTCAACCAATGGGAACGAGGTTTCTTGTCAGGCAAGTCAACTATTGAGTGGCAGTGAGAGTCATTATTCAAGTCCTATTAACTTCCAATGCAATGTCCCTCCTATGGCTGGATTTGACCAAGCTTCCTCTGATACCAATCCTACAACCTTCTGGCTCTCCCATGACATGATTCTTGATTCTTCAAAGGACTATTCTCAAGGGCAATTACAAGATGTTGTTGGATGTTTTCCACAGCAACATGAGTTATCGAGTACAATCTCAACTTGGCAATCATTTCAACATACTGAAATTTCACCTTGTTCATCCTACTCAAATTTTAATGCGGAAATTGAATTTCCTGACACTCCTAGCCAAATTGGTTGCATGTCACCTTATTCAGGACAAGGAAGTTTCATGGACTTGCCTTATGAATGCTATGATCAGATTCATTCATTCAGGAATCCAAATCAATTCTGA
Protein sequence

>Msa0755580

MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIEFYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCEPSPFISTETVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLNDDPSQGSEGAFALCRVIKKNEKANDSEGQGGKRVRANDGSNSISTNGNEVSCQASQLLSGSESHYSSPINFQCNVPPMAGFDQASSDTNPTTFWLSHDMILDSSKDYSQGQLQDVVGCFPQQHELSSTISTWQSFQHTEISPCSSYSNFNAEIEFPDTPSQIGCMSPYSGQGSFMDLPYECYDQIHSFRNPNQF*