AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797230 MtrunA17_Chr5g0400461 96.119 335 13 0 1 335 1 335 0.0 674
Msa0797230 MtrunA17_Chr4g0054791 60.290 345 100 9 1 335 1 318 7.21e-132 378
Msa0797230 MtrunA17_Chr6g0481091 62.500 176 56 2 1 173 1 169 3.13e-74 229
Msa0797230 MtrunA17_Chr3g0109821 64.024 164 48 2 1 160 1 157 4.58e-70 230
Msa0797230 MtrunA17_Chr5g0433781 63.804 163 49 2 1 160 1 156 7.67e-67 221
Msa0797230 MtrunA17_Chr2g0309891 46.930 228 102 3 1 216 1 221 8.07e-67 213
Msa0797230 MtrunA17_Chr3g0128151 53.529 170 69 3 5 171 21 183 5.23e-53 183
Msa0797230 MtrunA17_Chr5g0428991 53.704 162 65 3 6 164 25 179 1.39e-52 183
Msa0797230 MtrunA17_Chr1g0201021 55.769 156 59 2 8 160 21 169 1.79e-52 181
Msa0797230 MtrunA17_Chr3g0128111 52.201 159 66 2 9 164 45 196 4.42e-52 172
Msa0797230 MtrunA17_Chr2g0318081 51.190 168 68 4 1 164 11 168 2.31e-51 174
Msa0797230 MtrunA17_Chr2g0309331 50.307 163 69 4 2 160 6 160 8.58e-51 172
Msa0797230 MtrunA17_Chr4g0018391 49.057 159 72 3 4 160 5 156 1.07e-50 172
Msa0797230 MtrunA17_Chr7g0252971 47.059 170 79 4 4 164 6 173 1.20e-50 171
Msa0797230 MtrunA17_Chr8g0384721 48.588 177 71 4 2 168 3 169 1.37e-50 169
Msa0797230 MtrunA17_Chr4g0056541 49.686 159 71 3 4 160 5 156 1.73e-50 171
Msa0797230 MtrunA17_Chr3g0130731 51.190 168 66 4 2 163 3 160 2.77e-50 169
Msa0797230 MtrunA17_Chr8g0359921 52.469 162 63 3 5 161 13 165 8.21e-50 169
Msa0797230 MtrunA17_Chr1g0200561 49.682 157 70 3 6 160 19 168 8.90e-50 169
Msa0797230 MtrunA17_Chr4g0017921 51.266 158 69 2 4 160 6 156 9.08e-50 169
Msa0797230 MtrunA17_Chr5g0405211 50.314 159 66 4 6 160 8 157 9.93e-50 169
Msa0797230 MtrunA17_Chr5g0398971 47.500 160 75 3 4 160 5 158 1.05e-49 169
Msa0797230 MtrunA17_Chr2g0318101 48.824 170 66 5 5 160 14 176 1.09e-49 169
Msa0797230 MtrunA17_Chr1g0197361 52.564 156 64 3 8 160 10 158 1.20e-49 174
Msa0797230 MtrunA17_Chr4g0060931 44.560 193 84 4 6 193 17 191 1.62e-49 169
Msa0797230 MtrunA17_Chr2g0316971 50.898 167 70 3 4 165 21 180 2.39e-49 169
Msa0797230 MtrunA17_Chr8g0372121 50.303 165 69 5 1 161 1 156 2.45e-49 167
Msa0797230 MtrunA17_Chr3g0091921 46.237 186 84 4 6 184 16 192 1.07e-48 165
Msa0797230 MtrunA17_Chr8g0364791 45.405 185 91 2 1 182 1 178 2.46e-48 168
Msa0797230 MtrunA17_Chr1g0197351 54.167 168 59 3 4 161 40 199 2.49e-48 169
Msa0797230 MtrunA17_Chr4g0076731 50.649 154 67 3 8 160 56 201 2.75e-48 167
Msa0797230 MtrunA17_Chr4g0042561 40.426 235 107 6 2 215 5 227 2.77e-48 163
Msa0797230 MtrunA17_Chr4g0047841 54.348 138 56 2 6 143 15 145 2.88e-48 165
Msa0797230 MtrunA17_Chr6g0453131 47.904 167 67 4 6 160 15 173 3.81e-48 166
Msa0797230 MtrunA17_Chr3g0130101 46.857 175 83 3 8 179 9 176 4.24e-48 165
Msa0797230 MtrunA17_Chr3g0124761 52.174 161 61 5 6 160 7 157 4.58e-48 163
Msa0797230 MtrunA17_Chr6g0484441 49.045 157 70 3 5 160 4 151 7.71e-48 164
Msa0797230 MtrunA17_Chr3g0092671 50.318 157 68 3 8 161 7 156 1.15e-47 168
Msa0797230 MtrunA17_Chr8g0346001 44.211 190 80 5 2 174 11 191 2.78e-47 165
Msa0797230 MtrunA17_Chr6g0453451 50.625 160 65 3 6 160 20 170 3.58e-47 162
Msa0797230 MtrunA17_Chr5g0417791 39.914 233 109 5 6 216 3 226 7.48e-47 159
Msa0797230 MtrunA17_Chr1g0147421 46.857 175 84 5 5 177 26 193 3.40e-46 160
Msa0797230 MtrunA17_Chr8g0361731 46.108 167 67 4 8 160 16 173 4.54e-46 160
Msa0797230 MtrunA17_Chr3g0139331 45.946 185 84 5 5 188 10 179 4.61e-46 159
Msa0797230 MtrunA17_Chr7g0214071 44.809 183 89 4 2 182 11 183 5.90e-46 157
Msa0797230 MtrunA17_Chr1g0183741 48.795 166 77 4 3 168 7 164 7.10e-46 157
Msa0797230 MtrunA17_Chr8g0384201 43.784 185 94 3 1 182 1 178 1.49e-45 161
Msa0797230 MtrunA17_Chr5g0417001 47.024 168 67 5 6 160 14 172 1.58e-45 159
Msa0797230 MtrunA17_Chr7g0263931 39.344 244 117 9 6 241 11 231 6.24e-45 156
Msa0797230 MtrunA17_Chr7g0261411 51.613 155 67 4 3 157 7 153 1.08e-44 154
Msa0797230 MtrunA17_Chr7g0253011 50.676 148 60 3 6 153 17 151 1.22e-44 157
Msa0797230 MtrunA17_Chr2g0326361 46.061 165 71 4 5 160 13 168 1.32e-44 155
Msa0797230 MtrunA17_Chr6g0461661 52.206 136 58 2 6 141 18 146 3.20e-44 155
Msa0797230 MtrunA17_Chr4g0038751 39.048 210 120 3 8 217 17 218 1.95e-42 149
Msa0797230 MtrunA17_Chr3g0144271 54.745 137 54 3 6 141 23 152 9.52e-42 150
Msa0797230 MtrunA17_Chr2g0312321 46.429 168 75 4 1 164 6 162 2.17e-41 146
Msa0797230 MtrunA17_Chr8g0345671 48.701 154 70 4 6 158 11 156 2.28e-41 148
Msa0797230 MtrunA17_Chr7g0217711 51.515 132 55 2 9 140 22 144 9.35e-41 140
Msa0797230 MtrunA17_Chr7g0217721 52.273 132 54 2 9 140 22 144 1.10e-40 145
Msa0797230 MtrunA17_Chr2g0311661 42.262 168 79 3 8 161 23 186 2.34e-40 143
Msa0797230 MtrunA17_Chr5g0442771 42.262 168 73 4 8 160 20 178 1.02e-39 142
Msa0797230 MtrunA17_Chr2g0311651 42.857 175 81 6 2 161 17 187 1.21e-39 142
Msa0797230 MtrunA17_Chr2g0321741 44.444 162 66 4 26 187 12 149 4.52e-38 139
Msa0797230 MtrunA17_Chr8g0385991 43.293 164 76 4 2 157 10 164 3.08e-37 133
Msa0797230 MtrunA17_Chr8g0345691 44.156 154 77 4 6 158 12 157 8.88e-37 137
Msa0797230 MtrunA17_Chr8g0345711 44.099 161 78 5 6 162 12 164 4.11e-35 125
Msa0797230 MtrunA17_Chr3g0131911 42.373 177 85 5 2 169 10 178 1.20e-34 127
Msa0797230 MtrunA17_Chr2g0321631 44.172 163 71 6 7 157 5 159 2.42e-34 126
Msa0797230 MtrunA17_Chr7g0266701 42.690 171 78 7 5 162 3 166 3.44e-34 126
Msa0797230 MtrunA17_Chr4g0026141 42.236 161 78 5 6 157 5 159 1.72e-32 121
Msa0797230 MtrunA17_Chr8g0345731 40.000 155 85 3 6 157 24 173 9.05e-32 117
Msa0797230 MtrunA17_Chr3g0113001 50.943 106 39 2 61 160 18 116 2.83e-30 116
Msa0797230 MtrunA17_Chr4g0050701 35.838 173 87 4 6 169 11 168 5.85e-29 110
Msa0797230 MtrunA17_Chr8g0345701 41.060 151 66 5 4 139 5 147 2.99e-26 102
Msa0797230 MtrunA17_Chr8g0345721 37.278 169 65 5 5 138 29 191 1.14e-25 102
Msa0797230 MtrunA17_Chr8g0345741 40.323 124 67 3 17 139 2 119 7.46e-25 98.6
Msa0797230 MtrunA17_Chr3g0113031 48.454 97 36 2 71 160 3 92 3.15e-23 97.1
Msa0797230 MtrunA17_Chr7g0243371 44.444 90 45 1 56 145 12 96 7.89e-21 86.7
Msa0797230 MtrunA17_Chr8g0384351 31.527 203 104 9 1 200 2 172 8.22e-18 80.1
Msa0797230 MtrunA17_Chr7g0251651 28.902 173 98 6 3 164 15 173 6.90e-14 69.3
Msa0797230 MtrunA17_Chr3g0130321 27.778 180 102 4 4 169 5 170 1.71e-13 68.6
Msa0797230 MtrunA17_Chr4g0040541 30.357 168 91 8 6 157 48 205 2.67e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797230 AT4G17980.2 52.632 323 108 10 1 315 1 286 4.52e-98 292
Msa0797230 AT4G17980.1 57.778 270 79 7 1 264 1 241 4.82e-97 288
Msa0797230 AT5G46590.1 54.982 271 92 7 1 266 1 246 6.00e-93 279
Msa0797230 AT1G32510.1 65.534 206 62 4 1 202 1 201 1.39e-86 262
Msa0797230 AT5G46590.2 53.731 268 89 7 1 266 1 235 1.87e-86 262
Msa0797230 AT1G65910.1 64.162 173 52 2 1 170 1 166 2.59e-71 233
Msa0797230 AT5G17260.1 46.809 282 119 7 1 267 1 266 2.77e-70 226
Msa0797230 AT1G54330.1 65.217 161 49 1 1 161 1 154 1.89e-69 219
Msa0797230 AT3G17730.1 63.030 165 49 3 1 161 1 157 4.52e-69 216
Msa0797230 AT3G03200.1 65.244 164 46 3 1 160 1 157 1.05e-68 223
Msa0797230 AT1G33060.1 52.761 163 67 2 1 160 19 174 2.16e-54 188
Msa0797230 AT3G10500.1 54.037 161 64 2 4 161 7 160 2.32e-54 186
Msa0797230 AT1G33060.2 52.761 163 67 2 1 160 19 174 2.40e-54 188
Msa0797230 AT4G35580.1 55.346 159 61 3 5 160 8 159 1.01e-53 184
Msa0797230 AT4G35580.3 55.346 159 61 3 5 160 8 159 1.10e-53 184
Msa0797230 AT4G35580.2 55.346 159 61 3 5 160 8 159 1.20e-53 184
Msa0797230 AT3G49530.2 51.553 161 69 2 5 162 12 166 1.48e-53 181
Msa0797230 AT3G49530.1 51.553 161 69 2 5 162 12 166 3.40e-53 182
Msa0797230 AT5G04410.1 54.088 159 63 2 5 160 8 159 9.30e-53 182
Msa0797230 AT5G22290.1 51.176 170 71 4 1 170 16 173 1.55e-52 177
Msa0797230 AT5G24590.2 50.595 168 74 2 1 165 8 169 1.92e-52 179
Msa0797230 AT1G71930.2 49.686 159 71 3 4 160 7 158 2.43e-51 173
Msa0797230 AT1G71930.1 49.686 159 71 3 4 160 7 158 2.43e-51 173
Msa0797230 AT1G79580.3 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0797230 AT1G79580.5 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0797230 AT1G79580.4 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0797230 AT1G79580.2 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0797230 AT1G79580.1 52.469 162 66 3 2 160 13 166 3.98e-51 174
Msa0797230 AT3G10490.1 51.534 163 68 2 3 161 24 179 4.09e-51 170
Msa0797230 AT3G10480.1 52.727 165 67 3 1 161 22 179 4.65e-51 176
Msa0797230 AT4G36160.2 53.165 158 65 4 5 160 13 163 5.79e-51 174
Msa0797230 AT4G36160.1 53.165 158 65 4 5 160 9 159 6.11e-51 173
Msa0797230 AT4G36160.3 53.165 158 65 4 5 160 9 159 6.11e-51 173
Msa0797230 AT4G27410.2 53.459 159 62 4 5 160 13 162 9.31e-51 171
Msa0797230 AT2G18060.3 50.617 162 71 4 1 160 4 158 1.08e-50 172
Msa0797230 AT2G18060.1 50.617 162 71 4 1 160 4 158 1.08e-50 172
Msa0797230 AT3G10480.2 51.829 164 69 2 1 161 22 178 1.59e-50 174
Msa0797230 AT3G44290.2 53.548 155 60 3 8 162 16 158 1.62e-50 168
Msa0797230 AT1G12260.2 49.686 159 71 3 4 160 5 156 1.84e-50 171
Msa0797230 AT1G12260.1 49.686 159 71 3 4 160 5 156 1.87e-50 172
Msa0797230 AT4G10350.1 42.616 237 104 8 1 220 1 222 2.54e-50 171
Msa0797230 AT5G64060.1 48.171 164 75 2 1 161 1 157 2.65e-50 171
Msa0797230 AT5G07680.2 49.143 175 67 4 6 175 3 160 2.85e-50 170
Msa0797230 AT5G07680.1 49.143 175 67 4 6 175 17 174 3.75e-50 170
Msa0797230 AT2G02450.2 51.948 154 65 3 8 160 53 198 7.84e-50 171
Msa0797230 AT1G52890.1 52.727 165 62 5 5 164 13 166 7.99e-50 169
Msa0797230 AT3G04070.2 50.877 171 70 5 4 164 8 174 9.07e-50 169
Msa0797230 AT2G02450.1 51.948 154 65 3 8 160 53 198 9.94e-50 170
Msa0797230 AT3G44290.1 53.548 155 60 3 8 162 16 158 1.04e-49 169
Msa0797230 AT3G10490.2 51.534 163 68 2 3 161 24 179 1.13e-49 172
Msa0797230 AT3G15500.1 52.727 165 62 5 5 164 13 166 1.60e-49 168
Msa0797230 AT2G24430.2 51.250 160 69 3 5 162 15 167 2.19e-49 167
Msa0797230 AT2G24430.1 51.250 160 69 3 5 162 15 167 2.19e-49 167
Msa0797230 AT2G27300.1 51.572 159 65 3 1 159 9 155 2.58e-49 168
Msa0797230 AT5G09330.5 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0797230 AT5G09330.2 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0797230 AT5G09330.4 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0797230 AT5G09330.3 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0797230 AT5G09330.1 44.324 185 93 2 1 182 1 178 3.30e-49 172
Msa0797230 AT1G62700.1 47.853 163 76 3 4 164 5 160 1.19e-48 168
Msa0797230 AT1G62700.2 47.853 163 76 3 4 164 5 160 1.19e-48 168
Msa0797230 AT5G61430.1 48.000 175 69 4 6 175 16 173 1.56e-48 166
Msa0797230 AT5G39610.1 51.250 160 64 3 6 160 20 170 2.01e-48 164
Msa0797230 AT1G61110.1 46.857 175 70 4 2 161 12 178 2.22e-48 165
Msa0797230 AT1G69490.1 46.591 176 75 4 4 169 7 173 3.76e-48 163
Msa0797230 AT3G04070.1 56.115 139 57 3 4 142 8 142 4.28e-48 166
Msa0797230 AT3G29035.1 54.088 159 54 4 6 162 24 165 4.98e-48 164
Msa0797230 AT5G66300.1 49.383 162 68 5 5 161 11 163 6.26e-48 163
Msa0797230 AT1G33280.1 48.734 158 73 2 4 160 6 156 7.11e-48 163
Msa0797230 AT1G34190.1 50.307 163 71 2 2 161 12 167 7.35e-48 169
Msa0797230 AT3G18400.1 48.780 164 69 4 5 164 4 156 8.06e-48 164
Msa0797230 AT4G27410.3 50.000 174 62 5 5 160 13 179 8.59e-48 164
Msa0797230 AT3G15170.1 50.932 161 67 3 6 161 20 173 8.63e-48 163
Msa0797230 AT1G32770.1 46.286 175 69 5 2 160 12 177 1.13e-47 164
Msa0797230 AT5G08790.1 49.697 165 65 3 5 161 6 160 2.77e-47 161
Msa0797230 AT1G01720.1 55.474 137 51 3 6 142 7 133 5.83e-47 160
Msa0797230 AT3G04060.1 49.080 163 70 3 4 161 18 172 7.67e-47 162
Msa0797230 AT3G61910.1 43.017 179 74 4 2 161 7 176 1.38e-46 161
Msa0797230 AT5G62380.2 47.170 159 75 3 4 160 5 156 1.44e-46 161
Msa0797230 AT5G62380.1 47.170 159 75 3 4 160 5 156 1.44e-46 161
Msa0797230 AT2G43000.1 50.000 158 64 4 8 160 20 167 1.47e-46 159
Msa0797230 AT3G10480.3 43.939 198 67 3 1 161 22 212 4.98e-46 164
Msa0797230 AT1G34180.3 50.641 156 67 3 8 160 18 166 6.27e-46 162
Msa0797230 AT2G46770.1 50.345 145 60 3 2 143 12 147 7.43e-46 160
Msa0797230 AT5G18270.2 49.080 163 70 3 4 161 19 173 9.04e-46 159
Msa0797230 AT5G18270.1 46.471 170 78 3 4 168 19 180 1.74e-45 158
Msa0797230 AT1G77450.1 42.534 221 99 9 3 215 5 205 1.80e-45 155
Msa0797230 AT5G53950.1 49.697 165 71 3 6 165 17 174 2.03e-45 159
Msa0797230 AT1G34180.1 50.000 156 68 2 8 160 18 166 3.65e-45 162
Msa0797230 AT2G33480.1 48.521 169 72 3 2 167 11 167 5.64e-45 155
Msa0797230 AT5G63790.1 49.390 164 65 4 5 160 49 202 6.07e-45 156
Msa0797230 AT5G63790.2 49.390 164 65 4 5 160 59 212 6.42e-45 156
Msa0797230 AT2G17040.1 40.553 217 109 5 1 205 1 209 8.09e-45 154
Msa0797230 AT5G39820.1 37.118 229 110 4 8 212 22 240 2.88e-44 155
Msa0797230 AT3G15510.1 44.970 169 72 4 10 164 21 182 3.12e-44 155
Msa0797230 AT1G26870.1 47.337 169 66 4 6 160 16 175 3.25e-44 157
Msa0797230 AT1G76420.1 50.955 157 68 3 6 160 22 171 4.18e-44 154
Msa0797230 AT1G32870.1 52.469 162 63 3 4 160 8 160 1.02e-43 157
Msa0797230 AT1G32870.2 52.469 162 63 3 4 160 8 160 1.04e-43 157
Msa0797230 AT1G52880.1 47.239 163 70 4 10 161 21 178 1.05e-43 153
Msa0797230 AT2G33480.2 47.904 167 74 3 2 167 11 165 1.10e-43 151
Msa0797230 AT1G32870.3 52.469 162 63 3 4 160 44 196 2.69e-43 157
Msa0797230 AT1G34180.4 41.063 207 100 4 2 193 12 211 7.25e-43 154
Msa0797230 AT5G13180.1 46.988 166 76 3 2 165 10 165 2.57e-42 147
Msa0797230 AT1G34180.2 47.024 168 67 4 8 160 18 178 4.38e-42 154
Msa0797230 AT3G12977.1 44.118 170 82 3 1 166 13 173 8.42e-41 144
Msa0797230 AT4G28530.1 45.714 175 69 6 3 160 7 172 8.91e-40 143
Msa0797230 AT1G56010.2 44.643 168 77 5 1 161 14 172 3.43e-39 141
Msa0797230 AT3G12910.1 42.708 192 79 8 8 176 23 206 7.21e-38 137
Msa0797230 AT5G04395.1 46.053 152 65 3 5 143 27 174 3.05e-35 127
Msa0797230 AT5G61430.2 48.333 120 42 3 61 175 6 110 1.23e-30 117
Msa0797230 AT5G22380.1 40.881 159 77 6 9 157 8 159 1.13e-29 114
Msa0797230 AT4G10350.2 41.520 171 72 6 63 220 20 175 3.04e-29 114
Msa0797230 AT3G44350.2 34.123 211 121 7 3 205 2 202 2.63e-28 110
Msa0797230 AT4G01550.1 35.938 192 112 4 9 199 7 188 8.26e-28 113
Msa0797230 AT4G01520.1 34.884 215 124 7 7 213 5 211 7.78e-27 107
Msa0797230 AT3G12977.2 49.074 108 44 2 63 166 20 120 1.45e-26 105
Msa0797230 AT3G04420.2 36.709 158 89 4 7 162 4 152 1.67e-26 107
Msa0797230 AT3G04420.1 36.709 158 89 4 7 162 4 152 1.97e-26 107
Msa0797230 AT3G44350.1 39.456 147 78 5 3 145 2 141 4.51e-26 102
Msa0797230 AT1G56010.1 49.541 109 40 3 63 164 8 108 2.23e-25 103
Msa0797230 AT4G28530.2 46.491 114 41 3 3 99 7 117 3.62e-25 103
Msa0797230 AT1G02230.1 35.057 174 97 7 7 175 4 166 1.71e-24 102
Msa0797230 AT4G01540.3 37.267 161 93 4 9 167 7 161 1.75e-24 103
Msa0797230 AT4G01540.4 37.267 161 93 4 9 167 7 161 1.89e-24 102
Msa0797230 AT5G64530.1 35.025 197 108 5 4 200 1 177 1.94e-24 98.6
Msa0797230 AT2G33480.3 47.222 108 47 2 63 167 10 110 2.95e-24 99.0
Msa0797230 AT1G02250.1 34.804 204 109 8 7 197 4 196 3.33e-24 102
Msa0797230 AT4G01540.2 37.267 161 93 4 9 167 7 161 5.07e-24 102
Msa0797230 AT4G01540.1 37.267 161 93 4 9 167 7 161 5.31e-24 102
Msa0797230 AT5G64530.2 39.855 138 64 4 5 142 2 120 6.89e-24 96.3
Msa0797230 AT1G02220.1 35.766 137 70 4 7 138 4 127 2.20e-21 94.4
Msa0797230 AT1G01010.1 34.783 161 96 6 9 165 6 161 9.11e-21 92.8
Msa0797230 AT3G10490.4 50.588 85 31 2 81 161 2 79 3.41e-18 84.7
Msa0797230 AT3G10490.3 50.588 85 31 2 81 161 2 79 3.41e-18 84.7
Msa0797230 AT5G14000.1 30.556 180 108 4 2 179 11 175 6.84e-18 81.3
Msa0797230 AT3G55210.1 31.515 165 91 5 6 157 11 166 6.12e-17 80.1
Msa0797230 AT5G14000.2 33.333 141 81 3 2 140 11 140 7.01e-17 77.4
Msa0797230 AT3G56530.1 29.487 156 99 4 5 157 51 198 1.59e-16 79.3
Msa0797230 AT2G43000.2 42.708 96 42 3 70 160 2 89 1.95e-16 77.0
Msa0797230 AT5G50820.1 30.198 202 108 8 1 191 10 189 4.55e-16 75.9
Msa0797230 AT2G18060.2 48.684 76 31 3 86 160 2 70 1.41e-14 73.2
Msa0797230 AT5G22290.2 42.857 84 37 3 87 170 2 74 9.28e-13 67.4
Msa0797230 AT1G28470.1 33.775 151 76 8 5 140 76 217 2.46e-11 64.3

Find 205 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGCCGGTCACAATTTA+AGG 0.122169 5_3:+9311447 Msa0797230:three_prime_UTR
ATTCTTATAACCTTTGTATA+TGG 0.174550 5_3:+9311776 Msa0797230:three_prime_UTR
TTATAGATTTCATCCGAATT+TGG 0.216728 5_3:+9310374 Msa0797230:three_prime_UTR
GAGACGAGGTTGAGACTTTA+TGG 0.233252 5_3:+9311071 Msa0797230:three_prime_UTR
TCTCAACCTCGTCTCTTCTT+AGG 0.247691 5_3:-9311063 Msa0797240:CDS
ACTCAAAGACAGACATTAAA+AGG 0.255543 5_3:-9310220 None:intergenic
ACCATTCACCACTTTCTCTT+TGG 0.260036 5_3:+9307573 Msa0797230:five_prime_UTR
CTATTTGTCCTTGAACCATT+TGG 0.260232 5_3:-9308891 None:intergenic
TGTGGAAACAGTTGCAAAAT+TGG 0.260709 5_3:-9310770 Msa0797240:CDS
ACTCTTCTGCATTGCTTGAT+TGG 0.276649 5_3:-9310927 Msa0797240:CDS
GGTTGCATGTCACCTTATTC+AGG 0.278280 5_3:+9309968 Msa0797230:CDS
CCTGACACTCCTAGCCAAAT+TGG 0.283562 5_3:+9309947 Msa0797230:CDS
CAAAGGTTATAAGAATGTTT+TGG 0.284044 5_3:-9311769 Msa0797240:CDS
CTCGTTCCCATTGGTTGAAA+TGG 0.287030 5_3:-9309324 None:intergenic
ATGATCAGATTCATTCATTC+AGG 0.291099 5_3:+9310026 Msa0797230:CDS
AGATGATCGGAGAGTATTTC+GGG 0.298853 5_3:+9311123 Msa0797230:three_prime_UTR
AAACTTCCTTGTCCTGAATA+AGG 0.309664 5_3:-9309980 None:intergenic
TATTTGTCCTTGAACCATTT+GGG 0.317092 5_3:-9308890 None:intergenic
ACATTGCATTGGAAGTTAAT+AGG 0.319093 5_3:-9309401 None:intergenic
TGTTGTTATATTCCTAAGTT+TGG 0.335033 5_3:+9307700 Msa0797230:five_prime_UTR
AAGTGAAACTGAAAATGTTT+TGG 0.343266 5_3:-9307930 None:intergenic
TGCATGGTTGTGTTTGTGTT+TGG 0.345549 5_3:+9311038 Msa0797230:three_prime_UTR
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 5_3:-9311616 Msa0797240:CDS
GGCTTTCCAGTAGCCAGCTT+TGG 0.349829 5_3:-9308919 None:intergenic
AAGATGATCGGAGAGTATTT+CGG 0.350796 5_3:+9311122 Msa0797230:three_prime_UTR
CTGTTTGAGATCAGAAATTC+AGG 0.351569 5_3:-9311507 Msa0797240:intron
AATTCTACAAATTTGATCCT+TGG 0.356563 5_3:+9308132 Msa0797230:CDS
TTCAGGACAAGGAAGTTTCA+TGG 0.359502 5_3:+9309985 Msa0797230:CDS
CATCCGAATTTGGTTTATAT+CGG 0.360065 5_3:+9310384 Msa0797230:three_prime_UTR
CCAGGCGTTGCATGCAAGTT+GGG 0.364061 5_3:-9311633 Msa0797240:intron
TTCTTATAACCTTTGTATAT+GGG 0.365139 5_3:+9311777 Msa0797230:three_prime_UTR
ATTCTACAAATTTGATCCTT+GGG 0.375015 5_3:+9308133 Msa0797230:CDS
CAACCACGGTGTAGCCGAAT+TGG 0.384589 5_3:+9311540 Msa0797230:three_prime_UTR
GTCTGATGCGTAGGCACAAT+TGG 0.387107 5_3:-9311399 Msa0797240:intron
ATTATGTTGTGTAGGTTTCC+CGG 0.391471 5_3:+9310339 Msa0797230:three_prime_UTR
CCTCTTTCCTCCTTGTCCTT+CGG 0.394344 5_3:-9309276 None:intergenic
AAGGTGACATGCAACCAATT+TGG 0.396046 5_3:-9309961 None:intergenic
ATTGAGGAAGTTGAAGAACT+TGG 0.400564 5_3:-9310739 Msa0797240:CDS
CCCAACTTGCATGCAACGCC+TGG 0.403538 5_3:+9311633 Msa0797230:three_prime_UTR
TAATGAATATATGTTATAAC+AGG 0.408990 5_3:+9311283 Msa0797230:three_prime_UTR
ATACCAATCCTACAACCTTC+TGG 0.410453 5_3:+9309459 Msa0797230:CDS
TGACCGATATAAACCAAATT+CGG 0.415532 5_3:-9310387 None:intergenic
TCTGAAAACAAAGAAGGAAT+AGG 0.417637 5_3:+9310062 Msa0797230:exon
CTTTAGGTGATCGAACCAAT+TGG 0.418283 5_3:+9309045 Msa0797230:CDS
CCAATTTGGCTAGGAGTGTC+AGG 0.418438 5_3:-9309947 None:intergenic
AATTTGTAGAATTCAATAAC+AGG 0.424548 5_3:-9308122 None:intergenic
GAGCCACCAAAGCTGGCTAC+TGG 0.428919 5_3:+9308913 Msa0797230:CDS
TACTGTGGAAGAGCTCCTTT+AGG 0.431670 5_3:+9309029 Msa0797230:CDS
TGGGAACGAGGTTTCTTGTC+AGG 0.433403 5_3:+9309337 Msa0797230:CDS
ATTCATCAAATAAAAGACTA+AGG 0.436824 5_3:+9310579 Msa0797230:three_prime_UTR
TCTATAAAAGTGATATCATC+CGG 0.438124 5_3:-9310358 None:intergenic
CAAGATTTGATCTCGGAGTT+CGG 0.438171 5_3:+9311376 Msa0797230:three_prime_UTR
TAGTTTCTGTCTAGTGCAAA+TGG 0.441303 5_3:-9310274 None:intergenic
TGCAATGTCCCTCCTATGGC+TGG 0.442131 5_3:+9309416 Msa0797230:CDS
GCGACAGTTTCTTATGCTGT+TGG 0.449688 5_3:+9311155 Msa0797230:three_prime_UTR
ACTAACCAGTGTTTCATCAA+TGG 0.450544 5_3:+9311737 Msa0797230:intron
GCAAATAGTGCCTACGTATC+CGG 0.451186 5_3:+9311340 Msa0797230:three_prime_UTR
CCGAAGGACAAGGAGGAAAG+AGG 0.451346 5_3:+9309276 Msa0797230:CDS
CGGAACAATTTGCCTTCTCA+TGG 0.454690 5_3:-9310637 Msa0797240:CDS
TGGGAGAGCCAGAAGGTTGT+AGG 0.455808 5_3:-9309467 None:intergenic
ACAAATAGAGCCACCAAAGC+TGG 0.456357 5_3:+9308906 Msa0797230:CDS
GGAAAATATGTACCAAACTT+AGG 0.458327 5_3:-9307712 None:intergenic
AAAATTGGATCTTGTTATTG+AGG 0.463462 5_3:-9310755 Msa0797240:CDS
ACAAGCCGGTCACAATTTAA+GGG 0.465753 5_3:+9311448 Msa0797230:three_prime_UTR
TCATCTTCATGAAGCTCTAC+AGG 0.467841 5_3:-9311106 Msa0797240:CDS
GGAGCTGTTCTTCGCCAATT+CGG 0.468447 5_3:-9311554 Msa0797240:CDS
AACATGGCTCTAACTGATCT+TGG 0.468885 5_3:+9311234 Msa0797230:three_prime_UTR
TTTAGGTGATCGAACCAATT+GGG 0.469718 5_3:+9309046 Msa0797230:CDS
ATATTCATGCATGACCCAAT+TGG 0.471797 5_3:-9309060 None:intergenic
TTGAGGAAGTTGAAGAACTT+GGG 0.474676 5_3:-9310738 Msa0797240:CDS
AGGAACATAGAAATATAGAA+TGG 0.474922 5_3:+9307989 Msa0797230:exon
AGTTAAACAAAAGATGTGAA+TGG 0.475321 5_3:+9310155 Msa0797230:three_prime_UTR
TCAGATGATTTGATATCTCC+AGG 0.475473 5_3:+9311804 Msa0797230:three_prime_UTR
CCTATCAATTCTTCATCGGT+TGG 0.476142 5_3:-9308047 None:intergenic
CCAACCGATGAAGAATTGAT+AGG 0.477159 5_3:+9308047 Msa0797230:CDS
TTTCCAGTAGCCAGCTTTGG+TGG 0.478466 5_3:-9308916 None:intergenic
GGGCAATTACAAGATGTTGT+TGG 0.478523 5_3:+9309809 Msa0797230:CDS
AAAGATGCAAAAGCAGCAAA+AGG 0.479326 5_3:+9310796 Msa0797230:three_prime_UTR
TGCTTTAAAGAGTTTAGAGC+TGG 0.480144 5_3:-9310706 Msa0797240:CDS
TACACCGTGGTTGCTCTACA+TGG 0.480998 5_3:-9311530 Msa0797240:CDS
GCAATTCCATTTCAACCAAT+GGG 0.481299 5_3:+9309318 Msa0797230:CDS
TGTTCAAGGATCCATGCATA+AGG 0.481436 5_3:-9311215 Msa0797240:CDS
AAGAGGGTTAGAGCTAATGA+TGG 0.484892 5_3:+9309293 Msa0797230:CDS
GGAGGAGCTTCGCTGCCTCC+AGG 0.486435 5_3:+9308011 Msa0797230:CDS
ACAATGATTCTGGAGCATAA+TGG 0.486626 5_3:+9307784 Msa0797230:five_prime_UTR
ATCAGTTAGAGCCATGTTCA+AGG 0.486726 5_3:-9311229 Msa0797240:CDS
AGCAATTCCATTTCAACCAA+TGG 0.488117 5_3:+9309317 Msa0797230:CDS
GGTAGACATGGAAAAGGCTC+TGG 0.488167 5_3:-9310976 Msa0797240:CDS
CATGATTCTTGATTCTTCAA+AGG 0.488637 5_3:+9309493 Msa0797230:CDS
TTAATCCCTTAAATTGTGAC+CGG 0.488804 5_3:-9311453 Msa0797240:intron
GCCAGGCGTTGCATGCAAGT+TGG 0.489802 5_3:-9311634 Msa0797240:intron
AAAATAAACCAAAGAGAAAG+TGG 0.490273 5_3:-9307581 None:intergenic
TGCATGCAAGTTGGGAGCCA+AGG 0.493195 5_3:-9311625 Msa0797240:CDS
CCAATGCAATGTCCCTCCTA+TGG 0.494392 5_3:+9309412 Msa0797230:CDS
TCAATTCTTCATCGGTTGGA+TGG 0.497157 5_3:-9308043 None:intergenic
GGTTGTAGGATTGGTATCAG+AGG 0.501312 5_3:-9309453 None:intergenic
GAGCCAGAAGGTTGTAGGAT+TGG 0.503637 5_3:-9309462 None:intergenic
ATCTGATCATAGCATTCATA+AGG 0.503854 5_3:-9310013 None:intergenic
GTTTGAGCATGTTGTTTGCA+TGG 0.505188 5_3:+9311022 Msa0797230:three_prime_UTR
TGTAATTTATTATGTTGTGT+AGG 0.505587 5_3:+9310331 Msa0797230:three_prime_UTR
ATCAATTCTGAAAACAAAGA+AGG 0.507825 5_3:+9310056 Msa0797230:exon
GGAACATAGAAATATAGAAT+GGG 0.513465 5_3:+9307990 Msa0797230:exon
TGGCAGCAATATGTAAAAGT+TGG 0.518460 5_3:-9311575 Msa0797240:CDS
GTCTATTCAATTCCATGAGA+AGG 0.518933 5_3:+9310625 Msa0797230:three_prime_UTR
CGGGATCGCAAGTACCCAAA+TGG 0.524999 5_3:+9308876 Msa0797230:CDS
ATGCATAAGGGTTGCAGCAG+AGG 0.527389 5_3:-9311202 Msa0797240:CDS
ATTTCCACTGAGACTGTCAC+AGG 0.530687 5_3:+9308984 Msa0797230:CDS
ACAAGAAACCTCGTTCCCAT+TGG 0.531913 5_3:-9309333 None:intergenic
AGACATTTACCTCCGAGCCT+TGG 0.532346 5_3:-9309103 None:intergenic
TATGGAGAAATTGATAGCCC+TGG 0.532775 5_3:-9311822 Msa0797240:CDS
GCAAGTACCCAAATGGTTCA+AGG 0.532989 5_3:+9308883 Msa0797230:CDS
GATAGGTATAGTACTACTCT+TGG 0.534586 5_3:+9307892 Msa0797230:five_prime_UTR
AAGAATCAAGAATCATGTCA+TGG 0.536644 5_3:-9309487 None:intergenic
AAGTTACAAGATGTTTCAGT+GGG 0.536724 5_3:+9310114 Msa0797230:three_prime_UTR
ATATCCTATCAATTCTTCAT+CGG 0.537612 5_3:-9308051 None:intergenic
CACTCTGCAGTCTGATGCGT+AGG 0.538972 5_3:-9311408 Msa0797240:intron
TGTCTTGATTTAGATTTACA+AGG 0.540561 5_3:+9311887 Msa0797230:three_prime_UTR
CCATAGGAGGGACATTGCAT+TGG 0.543388 5_3:-9309412 None:intergenic
AATAGCTTATATAATGGATG+AGG 0.543955 5_3:+9310431 Msa0797230:three_prime_UTR
GTTCAAGGATCCATGCATAA+GGG 0.544118 5_3:-9311214 Msa0797240:CDS
AAACTAGCTGCTGCACAAGT+TGG 0.544612 5_3:-9311003 Msa0797240:CDS
GATTGGTATCAGAGGAAGCT+TGG 0.544770 5_3:-9309445 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 5_3:+9311608 Msa0797230:three_prime_UTR
TCATGATCAATTTACTCAGT+AGG 0.549130 5_3:-9310471 None:intergenic
GAAACAGTTTGCAAAAGTGA+AGG 0.549134 5_3:-9307626 None:intergenic
AACTAGCAGGACTATTCTCA+AGG 0.550921 5_3:+9309788 Msa0797230:intron
TATATCGGTCATTGTATGTG+TGG 0.552924 5_3:+9310399 Msa0797230:three_prime_UTR
TTTACCTCCGAGCCTTGGCT+AGG 0.552976 5_3:-9309098 None:intergenic
CAAGTTGGTCAAGGTAGACA+TGG 0.553561 5_3:-9310988 Msa0797240:CDS
ACCAAAGAGAAAGTGGTGAA+TGG 0.554609 5_3:-9307574 None:intergenic
GGTCAAGGTAGACATGGAAA+AGG 0.558508 5_3:-9310982 Msa0797240:CDS
TTTGATCCTTGGGAGTTACC+TGG 0.560186 5_3:+9308143 Msa0797230:CDS
ATCTTGTGTTCAAACACAGC+CGG 0.561794 5_3:-9311359 Msa0797240:intron
TTGAACACAAGATTTGATCT+CGG 0.564648 5_3:+9311369 Msa0797230:three_prime_UTR
TACGCATCAGACTGCAGAGT+GGG 0.567158 5_3:+9311410 Msa0797230:three_prime_UTR
TTCCGCATTAAAATTTGAGT+AGG 0.567816 5_3:-9309915 None:intergenic
ACTTATTATTAGTACTCAGT+GGG 0.568638 5_3:-9310509 None:intergenic
TTCTGTCTAGTGCAAATGGA+GGG 0.570441 5_3:-9310270 None:intergenic
TTTGGGTACTTGCGATCCCG+TGG 0.573459 5_3:-9308873 None:intergenic
TTCATCAAATAAAAGACTAA+GGG 0.574168 5_3:+9310580 Msa0797230:three_prime_UTR
CTCGATAACTCATGTTGCTG+TGG 0.576057 5_3:-9309839 None:intergenic
TGGTCAAATCCAGCCATAGG+AGG 0.577334 5_3:-9309425 None:intergenic
TCAGTGGAAATGAATGGACT+AGG 0.578648 5_3:-9308972 None:intergenic
TAGAGCTTCATGAAGATGAT+CGG 0.579444 5_3:+9311110 Msa0797230:three_prime_UTR
CATTTCAACCAATGGGAACG+AGG 0.580432 5_3:+9309325 Msa0797230:CDS
GTTGGATGGAAACGAAAACC+TGG 0.583973 5_3:-9308029 None:intergenic
ACAGTCTCAGTGGAAATGAA+TGG 0.584355 5_3:-9308978 None:intergenic
CAATTGGTTCGATCACCTAA+AGG 0.588285 5_3:-9309044 None:intergenic
TGATGATCCTAGCCAAGGCT+CGG 0.588446 5_3:+9309091 Msa0797230:CDS
GCTTGGTCAAATCCAGCCAT+AGG 0.594904 5_3:-9309428 None:intergenic
AGAATCAAGAATCATGTCAT+GGG 0.595091 5_3:-9309486 None:intergenic
GCTGGCTACTGGAAAGCCAC+AGG 0.598108 5_3:+9308924 Msa0797230:CDS
GGAAAGCCACAGGAAAAGAC+AGG 0.599029 5_3:+9308934 Msa0797230:CDS
TCTGCTGCAACCCTTATGCA+TGG 0.600193 5_3:+9311204 Msa0797230:three_prime_UTR
TGCAGTCGAAGGAAAACGAA+AGG 0.603800 5_3:-9310882 Msa0797240:CDS
AGATTCATTAATGCAGTCGA+AGG 0.607766 5_3:-9310893 Msa0797240:CDS
CTCAATGATGATCCTAGCCA+AGG 0.611417 5_3:+9309086 Msa0797230:CDS
TACTTATTATTAGTACTCAG+TGG 0.611777 5_3:-9310510 None:intergenic
CAAGTTACAAGATGTTTCAG+TGG 0.612949 5_3:+9310113 Msa0797230:three_prime_UTR
CGAAGGACAAGGAGGAAAGA+GGG 0.614265 5_3:+9309277 Msa0797230:CDS
AAATTTGAGTAGGATGAACA+AGG 0.615587 5_3:-9309905 None:intergenic
CTATAAAAGTGATATCATCC+GGG 0.616117 5_3:-9310357 None:intergenic
TATCGAGTACAATCTCAACT+TGG 0.616686 5_3:+9309855 Msa0797230:CDS
GCAAATGATTCCGAAGGACA+AGG 0.617621 5_3:+9309266 Msa0797230:CDS
AGAGTATTTCGGGAGAGCAA+TGG 0.619871 5_3:+9311133 Msa0797230:three_prime_UTR
CATGTCATGGGAGAGCCAGA+AGG 0.622804 5_3:-9309474 None:intergenic
GAGAAGGCAAATGATTCCGA+AGG 0.623623 5_3:+9309260 Msa0797230:CDS
ATGTCACCTTATTCAGGACA+AGG 0.624913 5_3:+9309974 Msa0797230:CDS
AAAGTTAAATGACACTTCAA+CGG 0.625241 5_3:-9307814 None:intergenic
GCTGCTGCACAAGTTGGTCA+AGG 0.626016 5_3:-9310997 Msa0797240:CDS
ACATAGAAATATAGAATGGG+AGG 0.627145 5_3:+9307993 Msa0797230:exon
GGTACTGTCACAAATTTCCA+TGG 0.628747 5_3:-9311595 Msa0797240:CDS
AGAGGGTTAGAGCTAATGAT+GGG 0.630099 5_3:+9309294 Msa0797230:CDS
TGAACCTATCTCCACCCCAA+AGG 0.632778 5_3:-9307733 None:intergenic
GGTCAAATCCAGCCATAGGA+GGG 0.633856 5_3:-9309424 None:intergenic
TTTCTGTCTAGTGCAAATGG+AGG 0.640935 5_3:-9310271 None:intergenic
GACATGCAACCAATTTGGCT+AGG 0.642381 5_3:-9309956 None:intergenic
TCTAAATCAAGACATAGTCA+AGG 0.644103 5_3:-9311878 Msa0797240:intron
GACCTACCAGGTAACTCCCA+AGG 0.644578 5_3:-9308149 None:intergenic
CAGATGATTTGATATCTCCA+GGG 0.645408 5_3:+9311805 Msa0797230:three_prime_UTR
TGGAGATATCAAATCATCTG+AGG 0.646682 5_3:-9311802 Msa0797240:CDS
ACAGTCTTAAACTTACAAGC+CGG 0.651144 5_3:+9311434 Msa0797230:three_prime_UTR
CTTGGCTAGGATCATCATTG+AGG 0.653192 5_3:-9309085 None:intergenic
TCTGAGGATCCCATATACAA+AGG 0.659738 5_3:-9311786 Msa0797240:CDS
TATGCATGGATCCTTGAACA+TGG 0.660343 5_3:+9311218 Msa0797230:three_prime_UTR
ACATACACGGATTTCTGAGA+CGG 0.664223 5_3:+9310195 Msa0797230:three_prime_UTR
ATATGTTATAACAGGAACCC+CGG 0.665430 5_3:+9311291 Msa0797230:three_prime_UTR
CACTAGTCTTGAATTCTCTG+AGG 0.665482 5_3:-9310824 Msa0797240:CDS
CAGGCAAGTCAACTATTGAG+TGG 0.665687 5_3:+9309356 Msa0797230:CDS
ACTAGCAGGACTATTCTCAA+GGG 0.665974 5_3:+9309789 Msa0797230:intron
ATGCAAGAAGACTACATACA+CGG 0.667220 5_3:+9310182 Msa0797230:three_prime_UTR
TTCCGCGACACATCAACTCG+AGG 0.668844 5_3:+9310655 Msa0797230:three_prime_UTR
AACCTCGAGTTGATGTGTCG+CGG 0.672079 5_3:-9310657 Msa0797240:CDS
AGCCACAGGAAAAGACAGGA+AGG 0.673089 5_3:+9308938 Msa0797230:CDS
GTAACCTGTGACAGTCTCAG+TGG 0.678126 5_3:-9308988 None:intergenic
TCAAACACAGCCGGATACGT+AGG 0.678958 5_3:-9311350 Msa0797240:intron
ACAGCCATGTAGAGCAACCA+CGG 0.689758 5_3:+9311526 Msa0797230:three_prime_UTR
TGATCCTAGCCAAGGCTCGG+AGG 0.696143 5_3:+9309094 Msa0797230:CDS
TCGCCAATTCGGCTACACCG+TGG 0.698242 5_3:-9311543 Msa0797240:CDS
TTGGAACCTAAGAAGAGACG+AGG 0.710005 5_3:+9311057 Msa0797230:three_prime_UTR
CTACGCATCAGACTGCAGAG+TGG 0.715113 5_3:+9311409 Msa0797230:three_prime_UTR
AATGATTCCGAAGGACAAGG+AGG 0.715890 5_3:+9309269 Msa0797230:CDS
TGATATTGTTGTGACTTGTG+AGG 0.758451 5_3:-9310680 Msa0797240:CDS
GGATGGAAACGAAAACCTGG+AGG 0.767680 5_3:-9308026 None:intergenic
AGTTACAAGATGTTTCAGTG+GGG 0.791907 5_3:+9310115 Msa0797230:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGACAAAAGTTTTTATTTT+TGG + chr5_3:9307854-9307873 Msa0797230:five_prime_UTR 15.0%
!!! TTTTGGTTTTAATATTAGTA+AGG + chr5_3:9307969-9307988 Msa0797230:five_prime_UTR 15.0%
!!! ATTAACTTTTGAAAACTTTT+AGG + chr5_3:9308339-9308358 Msa0797230:intron 15.0%
!!! TTTCCATTATTTAATTTTGA+GGG - chr5_3:9308605-9308624 None:intergenic 15.0%
!!! TTTTCCATTATTTAATTTTG+AGG - chr5_3:9308606-9308625 None:intergenic 15.0%
!! CATAAAAATAGCTTATATAA+TGG + chr5_3:9310425-9310444 Msa0797230:three_prime_UTR 15.0%
!! TAATGAATATATGTTATAAC+AGG + chr5_3:9311283-9311302 Msa0797230:three_prime_UTR 15.0%
!!! TTGGTTTATTTTTAACTTCT+AGG + chr5_3:9307592-9307611 Msa0797230:five_prime_UTR 20.0%
!!! AAACTGTTTCTTTTTTTTCT+TGG + chr5_3:9307639-9307658 Msa0797230:five_prime_UTR 20.0%
!!! TTGTTTTAATACAATGATTC+TGG + chr5_3:9307774-9307793 Msa0797230:five_prime_UTR 20.0%
!!! TTTTTGGATTTTTCAGATTA+TGG + chr5_3:9307870-9307889 Msa0797230:five_prime_UTR 20.0%
!!! TGTGTTTTTTTGTTTGTTTT+TGG + chr5_3:9307952-9307971 Msa0797230:five_prime_UTR 20.0%
!! ATATTACCTAAAAAGAAAAG+TGG + chr5_3:9308070-9308089 Msa0797230:CDS 20.0%
!! AATTTGTAGAATTCAATAAC+AGG - chr5_3:9308125-9308144 None:intergenic 20.0%
!!! GTTTTTTTCTTTTCTAAAGT+AGG - chr5_3:9308228-9308247 None:intergenic 20.0%
!! TAACCCTCAAAATTAAATAA+TGG + chr5_3:9308599-9308618 Msa0797230:intron 20.0%
!!! TAATATGTTTTCTTTAGAGT+TGG + chr5_3:9308713-9308732 Msa0797230:intron 20.0%
!!! AATATGTTTTCTTTAGAGTT+GGG + chr5_3:9308714-9308733 Msa0797230:intron 20.0%
!!! TCTCATTCTTTTTAATAACT+CGG - chr5_3:9309244-9309263 None:intergenic 20.0%
!! AGTTATTAAAAAGAATGAGA+AGG + chr5_3:9309244-9309263 Msa0797230:CDS 20.0%
!! TCTAACATAAAGTTAGAATT+TGG + chr5_3:9309563-9309582 Msa0797230:intron 20.0%
!! TGTAATTTATTATGTTGTGT+AGG + chr5_3:9310331-9310350 Msa0797230:three_prime_UTR 20.0%
!! ATTCATCAAATAAAAGACTA+AGG + chr5_3:9310579-9310598 Msa0797230:three_prime_UTR 20.0%
!! TTCATCAAATAAAAGACTAA+GGG + chr5_3:9310580-9310599 Msa0797230:three_prime_UTR 20.0%
!! AATTAAAATTAACCTAGAGA+TGG + chr5_3:9311705-9311724 Msa0797230:intron 20.0%
!! ATTCTTATAACCTTTGTATA+TGG + chr5_3:9311776-9311795 Msa0797230:three_prime_UTR 20.0%
!! TTCTTATAACCTTTGTATAT+GGG + chr5_3:9311777-9311796 Msa0797230:three_prime_UTR 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG - chr5_3:9311843-9311862 Msa0797240:CDS 20.0%
! AAAATAAACCAAAGAGAAAG+TGG - chr5_3:9307584-9307603 None:intergenic 25.0%
! TGTTGTTATATTCCTAAGTT+TGG + chr5_3:9307700-9307719 Msa0797230:five_prime_UTR 25.0%
!! TTTGGTACATATTTTCCTTT+GGG + chr5_3:9307718-9307737 Msa0797230:five_prime_UTR 25.0%
! AAAGTTAAATGACACTTCAA+CGG - chr5_3:9307817-9307836 None:intergenic 25.0%
!! AAGTGAAACTGAAAATGTTT+TGG - chr5_3:9307933-9307952 None:intergenic 25.0%
! AGGAACATAGAAATATAGAA+TGG + chr5_3:9307989-9308008 Msa0797230:exon 25.0%
! GGAACATAGAAATATAGAAT+GGG + chr5_3:9307990-9308009 Msa0797230:exon 25.0%
! ATATCCTATCAATTCTTCAT+CGG - chr5_3:9308054-9308073 None:intergenic 25.0%
! AATTCTACAAATTTGATCCT+TGG + chr5_3:9308132-9308151 Msa0797230:CDS 25.0%
! ATTCTACAAATTTGATCCTT+GGG + chr5_3:9308133-9308152 Msa0797230:CDS 25.0%
! ACACGATTAATCACAAAATT+CGG - chr5_3:9308672-9308691 None:intergenic 25.0%
! TTTAAGAGAACTCTAATTTG+TGG + chr5_3:9308781-9308800 Msa0797230:intron 25.0%
!! TTAAGAGAACTCTAATTTGT+GGG + chr5_3:9308782-9308801 Msa0797230:intron 25.0%
!!! ATCCTACTCAAATTTTAATG+CGG + chr5_3:9309913-9309932 Msa0797230:CDS 25.0%
!!! CTTTGTTTTCAGAATTGATT+TGG - chr5_3:9310055-9310074 None:intergenic 25.0%
!! ATCAATTCTGAAAACAAAGA+AGG + chr5_3:9310056-9310075 Msa0797230:exon 25.0%
! AGTTAAACAAAAGATGTGAA+TGG + chr5_3:9310155-9310174 Msa0797230:three_prime_UTR 25.0%
! TCTATAAAAGTGATATCATC+CGG - chr5_3:9310361-9310380 None:intergenic 25.0%
! TTATAGATTTCATCCGAATT+TGG + chr5_3:9310374-9310393 Msa0797230:three_prime_UTR 25.0%
!!! AATAGCTTATATAATGGATG+AGG + chr5_3:9310431-9310450 Msa0797230:three_prime_UTR 25.0%
! ACTTATTATTAGTACTCAGT+GGG - chr5_3:9310512-9310531 None:intergenic 25.0%
! TACTTATTATTAGTACTCAG+TGG - chr5_3:9310513-9310532 None:intergenic 25.0%
!!! AAAATTGGATCTTGTTATTG+AGG - chr5_3:9310758-9310777 Msa0797240:CDS 25.0%
!!! TATTTGTTTTCTTTTGAACC+GGG - chr5_3:9311312-9311331 Msa0797240:intron 25.0%
!!! GTATTTGTTTTCTTTTGAAC+CGG - chr5_3:9311313-9311332 Msa0797240:intron 25.0%
!! CAAAGGTTATAAGAATGTTT+TGG - chr5_3:9311772-9311791 Msa0797240:CDS 25.0%
! TGTCTTGATTTAGATTTACA+AGG + chr5_3:9311887-9311906 Msa0797230:three_prime_UTR 25.0%
GGAAAATATGTACCAAACTT+AGG - chr5_3:9307715-9307734 None:intergenic 30.0%
! GTTTGGTACATATTTTCCTT+TGG + chr5_3:9307717-9307736 Msa0797230:five_prime_UTR 30.0%
! TTGGTACATATTTTCCTTTG+GGG + chr5_3:9307719-9307738 Msa0797230:five_prime_UTR 30.0%
!! GGATTTTTCAGATTATGGAT+AGG + chr5_3:9307875-9307894 Msa0797230:five_prime_UTR 30.0%
ACATAGAAATATAGAATGGG+AGG + chr5_3:9307993-9308012 Msa0797230:exon 30.0%
TTACCTAAAAAGAAAAGTGG+AGG + chr5_3:9308073-9308092 Msa0797230:CDS 30.0%
TACCTAAAAAGAAAAGTGGA+GGG + chr5_3:9308074-9308093 Msa0797230:CDS 30.0%
ACAACAAATAGGAGGATTTA+AGG + chr5_3:9308495-9308514 Msa0797230:intron 30.0%
!!! TTGTTTTGAGCTAACTACTA+AGG + chr5_3:9308755-9308774 Msa0797230:intron 30.0%
! TAAGAGAACTCTAATTTGTG+GGG + chr5_3:9308783-9308802 Msa0797230:intron 30.0%
! AACCATTCCATATCTCTTTT+TGG - chr5_3:9308843-9308862 None:intergenic 30.0%
TATTTGTCCTTGAACCATTT+GGG - chr5_3:9308893-9308912 None:intergenic 30.0%
TCTTCCACAGTAAAAAACTA+GGG - chr5_3:9309021-9309040 None:intergenic 30.0%
TTCTTATTGATCACTGTTGT+AGG + chr5_3:9309202-9309221 Msa0797230:intron 30.0%
TCTTATTGATCACTGTTGTA+GGG + chr5_3:9309203-9309222 Msa0797230:intron 30.0%
ACATTGCATTGGAAGTTAAT+AGG - chr5_3:9309404-9309423 None:intergenic 30.0%
AGAATCAAGAATCATGTCAT+GGG - chr5_3:9309489-9309508 None:intergenic 30.0%
AAGAATCAAGAATCATGTCA+TGG - chr5_3:9309490-9309509 None:intergenic 30.0%
CATGATTCTTGATTCTTCAA+AGG + chr5_3:9309493-9309512 Msa0797230:CDS 30.0%
AACTAATATCTACATGTGTC+TGG - chr5_3:9309736-9309755 None:intergenic 30.0%
AAATTTGAGTAGGATGAACA+AGG - chr5_3:9309908-9309927 None:intergenic 30.0%
TTCCGCATTAAAATTTGAGT+AGG - chr5_3:9309918-9309937 None:intergenic 30.0%
ATCTGATCATAGCATTCATA+AGG - chr5_3:9310016-9310035 None:intergenic 30.0%
ATGATCAGATTCATTCATTC+AGG + chr5_3:9310026-9310045 Msa0797230:CDS 30.0%
TCTGAAAACAAAGAAGGAAT+AGG + chr5_3:9310062-9310081 Msa0797230:exon 30.0%
AAGTTACAAGATGTTTCAGT+GGG + chr5_3:9310114-9310133 Msa0797230:three_prime_UTR 30.0%
ACTCAAAGACAGACATTAAA+AGG - chr5_3:9310223-9310242 None:intergenic 30.0%
CTATAAAAGTGATATCATCC+GGG - chr5_3:9310360-9310379 None:intergenic 30.0%
! CATCCGAATTTGGTTTATAT+CGG + chr5_3:9310384-9310403 Msa0797230:three_prime_UTR 30.0%
TGACCGATATAAACCAAATT+CGG - chr5_3:9310390-9310409 None:intergenic 30.0%
TCATGATCAATTTACTCAGT+AGG - chr5_3:9310474-9310493 None:intergenic 30.0%
! ATAGCAATTTTACTCAACTG+AGG + chr5_3:9310847-9310866 Msa0797230:three_prime_UTR 30.0%
!! ATTTGTTTTCTTTTGAACCG+GGG - chr5_3:9311311-9311330 Msa0797240:intron 30.0%
TTGAACACAAGATTTGATCT+CGG + chr5_3:9311369-9311388 Msa0797230:three_prime_UTR 30.0%
TTAATCCCTTAAATTGTGAC+CGG - chr5_3:9311456-9311475 Msa0797240:intron 30.0%
TTAATACATTCCTTCGAATG+AGG - chr5_3:9311687-9311706 Msa0797240:intron 30.0%
AAAATCCATTGATGAAACAC+TGG - chr5_3:9311745-9311764 Msa0797240:CDS 30.0%
TCTAAATCAAGACATAGTCA+AGG - chr5_3:9311881-9311900 Msa0797240:intron 30.0%
GAAACAGTTTGCAAAAGTGA+AGG - chr5_3:9307629-9307648 None:intergenic 35.0%
!! ACAATGATTCTGGAGCATAA+TGG + chr5_3:9307784-9307803 Msa0797230:five_prime_UTR 35.0%
GATAGGTATAGTACTACTCT+TGG + chr5_3:9307892-9307911 Msa0797230:five_prime_UTR 35.0%
TCACATATTGATCAGTTGCA+TGG + chr5_3:9308182-9308201 Msa0797230:intron 35.0%
! AACTTTTAGGCTGTAAAAGC+CGG + chr5_3:9308352-9308371 Msa0797230:intron 35.0%
CTAAAATAATCCCGTTGAAC+CGG - chr5_3:9308374-9308393 None:intergenic 35.0%
TTTCCTGCCAAAAAGAGATA+TGG + chr5_3:9308833-9308852 Msa0797230:CDS 35.0%
!! ATTCCATATCTCTTTTTGGC+AGG - chr5_3:9308839-9308858 None:intergenic 35.0%
TGCCAAAAAGAGATATGGAA+TGG + chr5_3:9308838-9308857 Msa0797230:CDS 35.0%
! AATGGTTTTTCTTCTGTCCA+CGG + chr5_3:9308856-9308875 Msa0797230:CDS 35.0%
CTATTTGTCCTTGAACCATT+TGG - chr5_3:9308894-9308913 None:intergenic 35.0%
AGTAAAAAACTAGGGTCTTG+CGG - chr5_3:9309013-9309032 None:intergenic 35.0%
!!! AAGACCCTAGTTTTTTACTG+TGG + chr5_3:9309014-9309033 Msa0797230:CDS 35.0%
CTCTTCCACAGTAAAAAACT+AGG - chr5_3:9309022-9309041 None:intergenic 35.0%
TTTAGGTGATCGAACCAATT+GGG + chr5_3:9309046-9309065 Msa0797230:CDS 35.0%
ATATTCATGCATGACCCAAT+TGG - chr5_3:9309063-9309082 None:intergenic 35.0%
AGCAATTCCATTTCAACCAA+TGG + chr5_3:9309317-9309336 Msa0797230:CDS 35.0%
GCAATTCCATTTCAACCAAT+GGG + chr5_3:9309318-9309337 Msa0797230:CDS 35.0%
TATCGAGTACAATCTCAACT+TGG + chr5_3:9309855-9309874 Msa0797230:CDS 35.0%
AAACTTCCTTGTCCTGAATA+AGG - chr5_3:9309983-9310002 None:intergenic 35.0%
CAAGTTACAAGATGTTTCAG+TGG + chr5_3:9310113-9310132 Msa0797230:three_prime_UTR 35.0%
AGTTACAAGATGTTTCAGTG+GGG + chr5_3:9310115-9310134 Msa0797230:three_prime_UTR 35.0%
ATGCAAGAAGACTACATACA+CGG + chr5_3:9310182-9310201 Msa0797230:three_prime_UTR 35.0%
TAGTTTCTGTCTAGTGCAAA+TGG - chr5_3:9310277-9310296 None:intergenic 35.0%
ATTATGTTGTGTAGGTTTCC+CGG + chr5_3:9310339-9310358 Msa0797230:three_prime_UTR 35.0%
TATATCGGTCATTGTATGTG+TGG + chr5_3:9310399-9310418 Msa0797230:three_prime_UTR 35.0%
GTCTATTCAATTCCATGAGA+AGG + chr5_3:9310625-9310644 Msa0797230:three_prime_UTR 35.0%
! TGATATTGTTGTGACTTGTG+AGG - chr5_3:9310683-9310702 Msa0797240:CDS 35.0%
!! TGCTTTAAAGAGTTTAGAGC+TGG - chr5_3:9310709-9310728 Msa0797240:CDS 35.0%
TTGAGGAAGTTGAAGAACTT+GGG - chr5_3:9310741-9310760 Msa0797240:CDS 35.0%
ATTGAGGAAGTTGAAGAACT+TGG - chr5_3:9310742-9310761 Msa0797240:CDS 35.0%
TGTGGAAACAGTTGCAAAAT+TGG - chr5_3:9310773-9310792 Msa0797240:CDS 35.0%
AAAGATGCAAAAGCAGCAAA+AGG + chr5_3:9310796-9310815 Msa0797230:three_prime_UTR 35.0%
AGATTCATTAATGCAGTCGA+AGG - chr5_3:9310896-9310915 Msa0797240:CDS 35.0%
!! GTCAGTTTTAACACTCGATA+AGG + chr5_3:9310948-9310967 Msa0797230:three_prime_UTR 35.0%
TAGAGCTTCATGAAGATGAT+CGG + chr5_3:9311110-9311129 Msa0797230:three_prime_UTR 35.0%
!! AAGATGATCGGAGAGTATTT+CGG + chr5_3:9311122-9311141 Msa0797230:three_prime_UTR 35.0%
ATATGTTATAACAGGAACCC+CGG + chr5_3:9311291-9311310 Msa0797230:three_prime_UTR 35.0%
ACAGTCTTAAACTTACAAGC+CGG + chr5_3:9311434-9311453 Msa0797230:three_prime_UTR 35.0%
! CTGTTTGAGATCAGAAATTC+AGG - chr5_3:9311510-9311529 Msa0797240:CDS 35.0%
TGGCAGCAATATGTAAAAGT+TGG - chr5_3:9311578-9311597 Msa0797240:CDS 35.0%
! ACTTTTACATATTGCTGCCA+TGG + chr5_3:9311578-9311597 Msa0797230:three_prime_UTR 35.0%
! ATATCGCTTCGGTATTGAAT+TGG - chr5_3:9311659-9311678 Msa0797240:intron 35.0%
ATGAGGATCTTATATCGCTT+CGG - chr5_3:9311670-9311689 Msa0797240:intron 35.0%
GATATAAGATCCTCATTCGA+AGG + chr5_3:9311674-9311693 Msa0797230:intron 35.0%
ACTAACCAGTGTTTCATCAA+TGG + chr5_3:9311737-9311756 Msa0797230:intron 35.0%
TGGAGATATCAAATCATCTG+AGG - chr5_3:9311805-9311824 Msa0797240:CDS 35.0%
TCAGATGATTTGATATCTCC+AGG + chr5_3:9311804-9311823 Msa0797230:three_prime_UTR 35.0%
CAGATGATTTGATATCTCCA+GGG + chr5_3:9311805-9311824 Msa0797230:three_prime_UTR 35.0%
ACCATTCACCACTTTCTCTT+TGG + chr5_3:9307573-9307592 Msa0797230:five_prime_UTR 40.0%
ACCAAAGAGAAAGTGGTGAA+TGG - chr5_3:9307577-9307596 None:intergenic 40.0%
!! GTACATATTTTCCTTTGGGG+TGG + chr5_3:9307722-9307741 Msa0797230:five_prime_UTR 40.0%
! TCAATTCTTCATCGGTTGGA+TGG - chr5_3:9308046-9308065 None:intergenic 40.0%
CCTATCAATTCTTCATCGGT+TGG - chr5_3:9308050-9308069 None:intergenic 40.0%
CCAACCGATGAAGAATTGAT+AGG + chr5_3:9308047-9308066 Msa0797230:CDS 40.0%
!! GTCCCTCCACTTTTCTTTTT+AGG - chr5_3:9308079-9308098 None:intergenic 40.0%
GAAATTGAAGATGACCTACC+AGG - chr5_3:9308164-9308183 None:intergenic 40.0%
ACGTAATGTAGCAGAGTGAA+TGG + chr5_3:9308462-9308481 Msa0797230:intron 40.0%
GAGCTCAAAGCACAACAAAT+AGG + chr5_3:9308484-9308503 Msa0797230:intron 40.0%
CTCAAAGCACAACAAATAGG+AGG + chr5_3:9308487-9308506 Msa0797230:intron 40.0%
! ATAGGAGGATTTAAGGTGTG+AGG + chr5_3:9308502-9308521 Msa0797230:intron 40.0%
! TAGGAGGATTTAAGGTGTGA+GGG + chr5_3:9308503-9308522 Msa0797230:intron 40.0%
AAGCCCTTGAAATATGGTTC+AGG + chr5_3:9308529-9308548 Msa0797230:intron 40.0%
AGCCCTTGAAATATGGTTCA+GGG + chr5_3:9308530-9308549 Msa0797230:intron 40.0%
ACCCCTGAACCATATTTCAA+GGG - chr5_3:9308535-9308554 None:intergenic 40.0%
TACCCCTGAACCATATTTCA+AGG - chr5_3:9308536-9308555 None:intergenic 40.0%
TACCTCAACCAACCTATTGT+CGG + chr5_3:9308628-9308647 Msa0797230:intron 40.0%
! ATGGTTTTTCTTCTGTCCAC+GGG + chr5_3:9308857-9308876 Msa0797230:CDS 40.0%
! TCAGTGGAAATGAATGGACT+AGG - chr5_3:9308975-9308994 None:intergenic 40.0%
ACAGTCTCAGTGGAAATGAA+TGG - chr5_3:9308981-9309000 None:intergenic 40.0%
!! CAATTGGTTCGATCACCTAA+AGG - chr5_3:9309047-9309066 None:intergenic 40.0%
CTTTAGGTGATCGAACCAAT+TGG + chr5_3:9309045-9309064 Msa0797230:CDS 40.0%
AAGAGGGTTAGAGCTAATGA+TGG + chr5_3:9309293-9309312 Msa0797230:CDS 40.0%
AGAGGGTTAGAGCTAATGAT+GGG + chr5_3:9309294-9309313 Msa0797230:CDS 40.0%
ATACCAATCCTACAACCTTC+TGG + chr5_3:9309459-9309478 Msa0797230:CDS 40.0%
! TTTTTCCTCTTCCAACTAGC+AGG + chr5_3:9309775-9309794 Msa0797230:intron 40.0%
TTGAGAATAGTCCTGCTAGT+TGG - chr5_3:9309789-9309808 None:intergenic 40.0%
AACTAGCAGGACTATTCTCA+AGG + chr5_3:9309788-9309807 Msa0797230:intron 40.0%
ACTAGCAGGACTATTCTCAA+GGG + chr5_3:9309789-9309808 Msa0797230:intron 40.0%
GGGCAATTACAAGATGTTGT+TGG + chr5_3:9309809-9309828 Msa0797230:CDS 40.0%
AAGGTGACATGCAACCAATT+TGG - chr5_3:9309964-9309983 None:intergenic 40.0%
ATGTCACCTTATTCAGGACA+AGG + chr5_3:9309974-9309993 Msa0797230:CDS 40.0%
TTCAGGACAAGGAAGTTTCA+TGG + chr5_3:9309985-9310004 Msa0797230:CDS 40.0%
! ACATACACGGATTTCTGAGA+CGG + chr5_3:9310195-9310214 Msa0797230:three_prime_UTR 40.0%
TTCTGTCTAGTGCAAATGGA+GGG - chr5_3:9310273-9310292 None:intergenic 40.0%
TTTCTGTCTAGTGCAAATGG+AGG - chr5_3:9310274-9310293 None:intergenic 40.0%
! TGCTTTTGCATCTTTGCTTG+TGG - chr5_3:9310791-9310810 Msa0797240:CDS 40.0%
!! CACTAGTCTTGAATTCTCTG+AGG - chr5_3:9310827-9310846 Msa0797240:CDS 40.0%
ACTCTTCTGCATTGCTTGAT+TGG - chr5_3:9310930-9310949 Msa0797240:CDS 40.0%
! GTTTGAGCATGTTGTTTGCA+TGG + chr5_3:9311022-9311041 Msa0797230:three_prime_UTR 40.0%
TGCATGGTTGTGTTTGTGTT+TGG + chr5_3:9311038-9311057 Msa0797230:three_prime_UTR 40.0%
TCATCTTCATGAAGCTCTAC+AGG - chr5_3:9311109-9311128 Msa0797240:CDS 40.0%
!! AGATGATCGGAGAGTATTTC+GGG + chr5_3:9311123-9311142 Msa0797230:three_prime_UTR 40.0%
GTTCAAGGATCCATGCATAA+GGG - chr5_3:9311217-9311236 Msa0797240:CDS 40.0%
TGTTCAAGGATCCATGCATA+AGG - chr5_3:9311218-9311237 Msa0797240:CDS 40.0%
TATGCATGGATCCTTGAACA+TGG + chr5_3:9311218-9311237 Msa0797230:three_prime_UTR 40.0%
ATCAGTTAGAGCCATGTTCA+AGG - chr5_3:9311232-9311251 Msa0797240:CDS 40.0%
!! AACATGGCTCTAACTGATCT+TGG + chr5_3:9311234-9311253 Msa0797230:three_prime_UTR 40.0%
ATCTTGTGTTCAAACACAGC+CGG - chr5_3:9311362-9311381 Msa0797240:intron 40.0%
CAAGATTTGATCTCGGAGTT+CGG + chr5_3:9311376-9311395 Msa0797230:three_prime_UTR 40.0%
TACAAGCCGGTCACAATTTA+AGG + chr5_3:9311447-9311466 Msa0797230:three_prime_UTR 40.0%
ACAAGCCGGTCACAATTTAA+GGG + chr5_3:9311448-9311467 Msa0797230:three_prime_UTR 40.0%
GGTACTGTCACAAATTTCCA+TGG - chr5_3:9311598-9311617 Msa0797240:CDS 40.0%
TCTGAGGATCCCATATACAA+AGG - chr5_3:9311789-9311808 Msa0797240:CDS 40.0%
! TATGGAGAAATTGATAGCCC+TGG - chr5_3:9311825-9311844 Msa0797240:CDS 40.0%
!!! TTTTCCTTTGGGGTGGAGAT+AGG + chr5_3:9307729-9307748 Msa0797230:five_prime_UTR 45.0%
GTTGGATGGAAACGAAAACC+TGG - chr5_3:9308032-9308051 None:intergenic 45.0%
TTTGATCCTTGGGAGTTACC+TGG + chr5_3:9308143-9308162 Msa0797230:CDS 45.0%
! AGGAGGATTTAAGGTGTGAG+GGG + chr5_3:9308504-9308523 Msa0797230:intron 45.0%
GCCCTTGAAATATGGTTCAG+GGG + chr5_3:9308531-9308550 Msa0797230:intron 45.0%
CTACTTCTCCGACAATAGGT+TGG - chr5_3:9308639-9308658 None:intergenic 45.0%
GTGTCTACTTCTCCGACAAT+AGG - chr5_3:9308643-9308662 None:intergenic 45.0%
GTCGGAGAAGTAGACACTAT+TGG + chr5_3:9308646-9308665 Msa0797230:intron 45.0%
GCAAGTACCCAAATGGTTCA+AGG + chr5_3:9308883-9308902 Msa0797230:CDS 45.0%
ACAAATAGAGCCACCAAAGC+TGG + chr5_3:9308906-9308925 Msa0797230:CDS 45.0%
! AACCTTCCTGTCTTTTCCTG+TGG - chr5_3:9308943-9308962 None:intergenic 45.0%
ATTTCCACTGAGACTGTCAC+AGG + chr5_3:9308984-9309003 Msa0797230:CDS 45.0%
TACTGTGGAAGAGCTCCTTT+AGG + chr5_3:9309029-9309048 Msa0797230:CDS 45.0%
CTTGGCTAGGATCATCATTG+AGG - chr5_3:9309088-9309107 None:intergenic 45.0%
CTCAATGATGATCCTAGCCA+AGG + chr5_3:9309086-9309105 Msa0797230:CDS 45.0%
GAGAAGGCAAATGATTCCGA+AGG + chr5_3:9309260-9309279 Msa0797230:CDS 45.0%
GCAAATGATTCCGAAGGACA+AGG + chr5_3:9309266-9309285 Msa0797230:CDS 45.0%
AATGATTCCGAAGGACAAGG+AGG + chr5_3:9309269-9309288 Msa0797230:CDS 45.0%
! CTCGTTCCCATTGGTTGAAA+TGG - chr5_3:9309327-9309346 None:intergenic 45.0%
CATTTCAACCAATGGGAACG+AGG + chr5_3:9309325-9309344 Msa0797230:CDS 45.0%
ACAAGAAACCTCGTTCCCAT+TGG - chr5_3:9309336-9309355 None:intergenic 45.0%
CAGGCAAGTCAACTATTGAG+TGG + chr5_3:9309356-9309375 Msa0797230:CDS 45.0%
GATTGGTATCAGAGGAAGCT+TGG - chr5_3:9309448-9309467 None:intergenic 45.0%
! GGTTGTAGGATTGGTATCAG+AGG - chr5_3:9309456-9309475 None:intergenic 45.0%
!! TCTACATGTGTCTGGTTCTG+CGG - chr5_3:9309728-9309747 None:intergenic 45.0%
ATAGTCCTGCTAGTTGGAAG+AGG - chr5_3:9309783-9309802 None:intergenic 45.0%
CTCGATAACTCATGTTGCTG+TGG - chr5_3:9309842-9309861 None:intergenic 45.0%
GACATGCAACCAATTTGGCT+AGG - chr5_3:9309959-9309978 None:intergenic 45.0%
GGTTGCATGTCACCTTATTC+AGG + chr5_3:9309968-9309987 Msa0797230:CDS 45.0%
CGGAACAATTTGCCTTCTCA+TGG - chr5_3:9310640-9310659 Msa0797240:CDS 45.0%
TGCAGTCGAAGGAAAACGAA+AGG - chr5_3:9310885-9310904 Msa0797240:CDS 45.0%
GGTCAAGGTAGACATGGAAA+AGG - chr5_3:9310985-9311004 Msa0797240:CDS 45.0%
!! CAAGTTGGTCAAGGTAGACA+TGG - chr5_3:9310991-9311010 Msa0797240:CDS 45.0%
AAACTAGCTGCTGCACAAGT+TGG - chr5_3:9311006-9311025 Msa0797240:CDS 45.0%
TTGGAACCTAAGAAGAGACG+AGG + chr5_3:9311057-9311076 Msa0797230:three_prime_UTR 45.0%
TCTCAACCTCGTCTCTTCTT+AGG - chr5_3:9311066-9311085 Msa0797240:CDS 45.0%
GAGACGAGGTTGAGACTTTA+TGG + chr5_3:9311071-9311090 Msa0797230:three_prime_UTR 45.0%
! AGAGTATTTCGGGAGAGCAA+TGG + chr5_3:9311133-9311152 Msa0797230:three_prime_UTR 45.0%
GCGACAGTTTCTTATGCTGT+TGG + chr5_3:9311155-9311174 Msa0797230:three_prime_UTR 45.0%
GCAAATAGTGCCTACGTATC+CGG + chr5_3:9311340-9311359 Msa0797230:three_prime_UTR 45.0%
TGACAGTACCTAGAATGCCT+TGG + chr5_3:9311608-9311627 Msa0797230:three_prime_UTR 45.0%
AGTCTCTATGTGCCATCTCT+AGG - chr5_3:9311720-9311739 Msa0797240:intron 45.0%
TGAACCTATCTCCACCCCAA+AGG - chr5_3:9307736-9307755 None:intergenic 50.0%
GGATGGAAACGAAAACCTGG+AGG - chr5_3:9308029-9308048 None:intergenic 50.0%
ATCCTTGGGAGTTACCTGGT+AGG + chr5_3:9308147-9308166 Msa0797230:intron 50.0%
! GGCTGTAAAAGCCGGTTCAA+CGG + chr5_3:9308360-9308379 Msa0797230:intron 50.0%
! GCTGTAAAAGCCGGTTCAAC+GGG + chr5_3:9308361-9308380 Msa0797230:intron 50.0%
!! CTCCGACAATAGGTTGGTTG+AGG - chr5_3:9308633-9308652 None:intergenic 50.0%
! TTTCCAGTAGCCAGCTTTGG+TGG - chr5_3:9308919-9308938 None:intergenic 50.0%
GGAAAGCCACAGGAAAAGAC+AGG + chr5_3:9308934-9308953 Msa0797230:CDS 50.0%
AGCCACAGGAAAAGACAGGA+AGG + chr5_3:9308938-9308957 Msa0797230:CDS 50.0%
GTAACCTGTGACAGTCTCAG+TGG - chr5_3:9308991-9309010 None:intergenic 50.0%
TGATGATCCTAGCCAAGGCT+CGG + chr5_3:9309091-9309110 Msa0797230:CDS 50.0%
AGACATTTACCTCCGAGCCT+TGG - chr5_3:9309106-9309125 None:intergenic 50.0%
CCTCTTTCCTCCTTGTCCTT+CGG - chr5_3:9309279-9309298 None:intergenic 50.0%
CGAAGGACAAGGAGGAAAGA+GGG + chr5_3:9309277-9309296 Msa0797230:CDS 50.0%
TGGGAACGAGGTTTCTTGTC+AGG + chr5_3:9309337-9309356 Msa0797230:CDS 50.0%
CCATAGGAGGGACATTGCAT+TGG - chr5_3:9309415-9309434 None:intergenic 50.0%
CCAATGCAATGTCCCTCCTA+TGG + chr5_3:9309412-9309431 Msa0797230:CDS 50.0%
GGTCAAATCCAGCCATAGGA+GGG - chr5_3:9309427-9309446 None:intergenic 50.0%
TGGTCAAATCCAGCCATAGG+AGG - chr5_3:9309428-9309447 None:intergenic 50.0%
GCTTGGTCAAATCCAGCCAT+AGG - chr5_3:9309431-9309450 None:intergenic 50.0%
GAGCCAGAAGGTTGTAGGAT+TGG - chr5_3:9309465-9309484 None:intergenic 50.0%
!! CCAATTTGGCTAGGAGTGTC+AGG - chr5_3:9309950-9309969 None:intergenic 50.0%
CCTGACACTCCTAGCCAAAT+TGG + chr5_3:9309947-9309966 Msa0797230:CDS 50.0%
!! AACCTCGAGTTGATGTGTCG+CGG - chr5_3:9310660-9310679 Msa0797240:CDS 50.0%
GGTAGACATGGAAAAGGCTC+TGG - chr5_3:9310979-9310998 Msa0797240:CDS 50.0%
ATGCATAAGGGTTGCAGCAG+AGG - chr5_3:9311205-9311224 Msa0797240:CDS 50.0%
TCTGCTGCAACCCTTATGCA+TGG + chr5_3:9311204-9311223 Msa0797230:three_prime_UTR 50.0%
TCAAACACAGCCGGATACGT+AGG - chr5_3:9311353-9311372 Msa0797240:intron 50.0%
GTCTGATGCGTAGGCACAAT+TGG - chr5_3:9311402-9311421 Msa0797240:intron 50.0%
TACGCATCAGACTGCAGAGT+GGG + chr5_3:9311410-9311429 Msa0797230:three_prime_UTR 50.0%
ACAGCCATGTAGAGCAACCA+CGG + chr5_3:9311526-9311545 Msa0797230:three_prime_UTR 50.0%
TACACCGTGGTTGCTCTACA+TGG - chr5_3:9311533-9311552 Msa0797240:CDS 50.0%
GGAGCTGTTCTTCGCCAATT+CGG - chr5_3:9311557-9311576 Msa0797240:CDS 50.0%
! GCTTCGGTATTGAATTGGCC+AGG - chr5_3:9311654-9311673 Msa0797240:intron 50.0%
GACCTACCAGGTAACTCCCA+AGG - chr5_3:9308152-9308171 None:intergenic 55.0%
GGGGCGAAGCCCTTGAAATA+TGG + chr5_3:9308523-9308542 Msa0797230:intron 55.0%
TTTGGGTACTTGCGATCCCG+TGG - chr5_3:9308876-9308895 None:intergenic 55.0%
CGGGATCGCAAGTACCCAAA+TGG + chr5_3:9308876-9308895 Msa0797230:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr5_3:9308922-9308941 None:intergenic 55.0%
TTTACCTCCGAGCCTTGGCT+AGG - chr5_3:9309101-9309120 None:intergenic 55.0%
CCGAAGGACAAGGAGGAAAG+AGG + chr5_3:9309276-9309295 Msa0797230:CDS 55.0%
TGCAATGTCCCTCCTATGGC+TGG + chr5_3:9309416-9309435 Msa0797230:CDS 55.0%
TGGGAGAGCCAGAAGGTTGT+AGG - chr5_3:9309470-9309489 None:intergenic 55.0%
CATGTCATGGGAGAGCCAGA+AGG - chr5_3:9309477-9309496 None:intergenic 55.0%
TTCCGCGACACATCAACTCG+AGG + chr5_3:9310655-9310674 Msa0797230:three_prime_UTR 55.0%
!! GCTGCTGCACAAGTTGGTCA+AGG - chr5_3:9311000-9311019 Msa0797240:CDS 55.0%
CACTCTGCAGTCTGATGCGT+AGG - chr5_3:9311411-9311430 Msa0797240:intron 55.0%
CTACGCATCAGACTGCAGAG+TGG + chr5_3:9311409-9311428 Msa0797230:three_prime_UTR 55.0%
CAACCACGGTGTAGCCGAAT+TGG + chr5_3:9311540-9311559 Msa0797230:three_prime_UTR 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG - chr5_3:9311619-9311638 Msa0797240:CDS 55.0%
! TGCATGCAAGTTGGGAGCCA+AGG - chr5_3:9311628-9311647 Msa0797240:CDS 55.0%
! CCAGGCGTTGCATGCAAGTT+GGG - chr5_3:9311636-9311655 Msa0797240:intron 55.0%
GAGCCACCAAAGCTGGCTAC+TGG + chr5_3:9308913-9308932 Msa0797230:CDS 60.0%
GCTGGCTACTGGAAAGCCAC+AGG + chr5_3:9308924-9308943 Msa0797230:CDS 60.0%
TGATCCTAGCCAAGGCTCGG+AGG + chr5_3:9309094-9309113 Msa0797230:CDS 60.0%
TCGCCAATTCGGCTACACCG+TGG - chr5_3:9311546-9311565 Msa0797240:CDS 60.0%
CCCAACTTGCATGCAACGCC+TGG + chr5_3:9311633-9311652 Msa0797230:three_prime_UTR 60.0%
! GCCAGGCGTTGCATGCAAGT+TGG - chr5_3:9311637-9311656 Msa0797240:intron 60.0%
GGAGGAGCTTCGCTGCCTCC+AGG + chr5_3:9308011-9308030 Msa0797230:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9307569 9311912 9307569 ID=Msa0797230;Name=Msa0797230
chr5_3 mRNA 9307569 9311912 9307569 ID=Msa0797230-mRNA-1;Parent=Msa0797230;Name=Msa0797230-mRNA-1;_AED=0.08;_eAED=0.08;_QI=439|1|1|1|0.75|0.6|5|1755|335
chr5_3 exon 9307569 9308164 9307569 ID=Msa0797230-mRNA-1:exon:4034;Parent=Msa0797230-mRNA-1
chr5_3 exon 9308826 9309115 9308826 ID=Msa0797230-mRNA-1:exon:4035;Parent=Msa0797230-mRNA-1
chr5_3 exon 9309224 9309514 9309224 ID=Msa0797230-mRNA-1:exon:4036;Parent=Msa0797230-mRNA-1
chr5_3 exon 9309797 9311654 9309797 ID=Msa0797230-mRNA-1:exon:4037;Parent=Msa0797230-mRNA-1
chr5_3 exon 9311746 9311912 9311746 ID=Msa0797230-mRNA-1:exon:4038;Parent=Msa0797230-mRNA-1
chr5_3 five_prime_UTR 9307569 9308007 9307569 ID=Msa0797230-mRNA-1:five_prime_utr;Parent=Msa0797230-mRNA-1
chr5_3 CDS 9308008 9308164 9308008 ID=Msa0797230-mRNA-1:cds;Parent=Msa0797230-mRNA-1
chr5_3 CDS 9308826 9309115 9308826 ID=Msa0797230-mRNA-1:cds;Parent=Msa0797230-mRNA-1
chr5_3 CDS 9309224 9309514 9309224 ID=Msa0797230-mRNA-1:cds;Parent=Msa0797230-mRNA-1
chr5_3 CDS 9309797 9310066 9309797 ID=Msa0797230-mRNA-1:cds;Parent=Msa0797230-mRNA-1
chr5_3 three_prime_UTR 9310067 9311654 9310067 ID=Msa0797230-mRNA-1:three_prime_utr;Parent=Msa0797230-mRNA-1
chr5_3 three_prime_UTR 9311746 9311912 9311746 ID=Msa0797230-mRNA-1:three_prime_utr;Parent=Msa0797230-mRNA-1
Gene Sequence

>Msa0797230

ATGGGAGGAGCTTCGCTGCCTCCAGGTTTTCGTTTCCATCCAACCGATGAAGAATTGATAGGATATTACCTAAAAAGAAAAGTGGAGGGACTTGAAATTGAGCTTGAAGTTATACCTGTTATTGAATTCTACAAATTTGATCCTTGGGAGTTACCTGAGAAATCTTTCCTGCCAAAAAGAGATATGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGTTCAAGGACAAATAGAGCCACCAAAGCTGGCTACTGGAAAGCCACAGGAAAAGACAGGAAGGTTGTGTGTGAGCCTAGTCCATTCATTTCCACTGAGACTGTCACAGGTTACCGCAAGACCCTAGTTTTTTACTGTGGAAGAGCTCCTTTAGGTGATCGAACCAATTGGGTCATGCATGAATATCGCCTCAATGATGATCCTAGCCAAGGCTCGGAGGGTGCTTTTGCTTTATGCCGAGTTATTAAAAAGAATGAGAAGGCAAATGATTCCGAAGGACAAGGAGGAAAGAGGGTTAGAGCTAATGATGGGAGCAATTCCATTTCAACCAATGGGAACGAGGTTTCTTGTCAGGCAAGTCAACTATTGAGTGGCAGTGAGAGTCATTATTCAAGTCCTATTAACTTCCAATGCAATGTCCCTCCTATGGCTGGATTTGACCAAGCTTCCTCTGATACCAATCCTACAACCTTCTGGCTCTCCCATGACATGATTCTTGATTCTTCAAAGGACTATTCTCAAGGGCAATTACAAGATGTTGTTGGATGTTTTCCACAGCAACATGAGTTATCGAGTACAATCTCAACTTGGCAATCATTTCAACATACTGAAATTTCACCTTGTTCATCCTACTCAAATTTTAATGCGGAAATTGAATTTCCTGACACTCCTAGCCAAATTGGTTGCATGTCACCTTATTCAGGACAAGGAAGTTTCATGGACTTGCCTTATGAATGCTATGATCAGATTCATTCATTCAGGAATCCAAATCAATTCTGA
Protein sequence

>Msa0797230

MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIEFYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCEPSPFISTETVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLNDDPSQGSEGAFALCRVIKKNEKANDSEGQGGKRVRANDGSNSISTNGNEVSCQASQLLSGSESHYSSPINFQCNVPPMAGFDQASSDTNPTTFWLSHDMILDSSKDYSQGQLQDVVGCFPQQHELSSTISTWQSFQHTEISPCSSYSNFNAEIEFPDTPSQIGCMSPYSGQGSFMDLPYECYDQIHSFRNPNQF*