AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755850 MtrunA17_Chr5g0400781 97.059 272 5 3 1 271 1 270 0.0 528
Msa0755850 MtrunA17_Chr4g0054421 64.360 289 67 9 1 271 1 271 3.11e-98 288
Msa0755850 MtrunA17_Chr2g0308611 70.548 146 40 2 94 237 169 313 1.68e-64 205
Msa0755850 MtrunA17_Chr1g0175651 72.388 134 36 1 104 237 135 267 1.84e-63 201
Msa0755850 MtrunA17_Chr1g0151971 57.868 197 73 6 73 266 83 272 2.61e-63 200
Msa0755850 MtrunA17_Chr5g0399491 59.067 193 66 5 47 237 69 250 1.11e-62 199
Msa0755850 MtrunA17_Chr7g0258831 70.455 132 39 0 106 237 142 273 1.21e-62 199
Msa0755850 MtrunA17_Chr4g0055851 64.242 165 48 5 74 237 80 234 3.67e-61 194
Msa0755850 MtrunA17_Chr8g0335131 61.765 170 55 3 74 235 91 258 5.39e-60 192
Msa0755850 MtrunA17_Chr3g0135331 57.222 180 67 4 93 266 117 292 1.39e-50 168
Msa0755850 MtrunA17_Chr4g0044091 58.955 134 49 1 123 250 64 197 6.30e-48 158
Msa0755850 MtrunA17_Chr2g0299031 52.349 149 67 2 91 238 52 197 9.31e-41 140
Msa0755850 MtrunA17_Chr4g0071411 64.655 116 33 3 126 235 90 203 9.37e-38 132
Msa0755850 MtrunA17_Chr5g0416391 38.411 151 79 2 73 215 24 168 7.42e-20 86.7
Msa0755850 MtrunA17_Chr7g0217111 45.833 96 52 0 115 210 71 166 1.02e-18 83.6
Msa0755850 MtrunA17_Chr8g0362151 42.500 120 62 1 96 215 56 168 1.12e-18 83.6
Msa0755850 MtrunA17_Chr6g0453021 45.794 107 51 1 111 210 83 189 1.51e-18 83.2
Msa0755850 MtrunA17_Chr6g0450991 48.913 92 47 0 124 215 67 158 3.07e-18 82.4
Msa0755850 MtrunA17_Chr5g0415941 40.559 143 72 4 78 211 43 181 8.69e-18 81.6
Msa0755850 MtrunA17_Chr7g0265521 40.187 107 63 1 105 210 43 149 1.66e-16 76.6
Msa0755850 MtrunA17_Chr8g0362751 46.809 94 43 1 124 210 89 182 1.95e-16 77.4
Msa0755850 MtrunA17_Chr3g0119291 47.368 95 43 1 124 211 59 153 4.15e-16 75.9
Msa0755850 MtrunA17_Chr4g0060031 45.833 96 52 0 116 211 87 182 5.20e-16 76.6
Msa0755850 MtrunA17_Chr3g0123691 42.718 103 52 1 116 211 52 154 1.04e-15 75.5
Msa0755850 MtrunA17_Chr8g0381741 46.392 97 45 1 122 211 52 148 1.59e-15 75.1
Msa0755850 MtrunA17_Chr1g0179581 44.186 86 48 0 121 206 25 110 6.61e-15 69.3
Msa0755850 MtrunA17_Chr8g0346251 35.878 131 72 3 128 251 45 170 1.01e-12 66.2
Msa0755850 MtrunA17_Chr3g0127511 43.617 94 52 1 127 220 41 133 5.14e-12 64.3
Msa0755850 MtrunA17_Chr5g0403701 44.000 100 51 1 119 218 48 142 2.07e-11 62.0
Msa0755850 MtrunA17_Chr5g0403691 44.086 93 52 0 119 211 48 140 3.25e-11 61.6
Msa0755850 MtrunA17_Chr5g0410711 32.500 120 81 0 101 220 69 188 4.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755850 AT4G37790.1 60.690 290 83 9 1 271 1 278 5.83e-93 276
Msa0755850 AT2G22800.1 57.093 289 91 8 1 271 1 274 1.14e-83 252
Msa0755850 AT5G06710.1 68.707 147 42 2 96 240 162 306 2.52e-65 207
Msa0755850 AT3G60390.1 59.091 176 58 3 74 235 99 274 8.47e-60 192
Msa0755850 AT4G16780.1 66.901 142 45 2 96 236 102 242 1.46e-59 191
Msa0755850 AT2G44910.1 54.822 197 76 4 49 236 84 276 2.78e-57 186
Msa0755850 AT5G47370.1 51.659 211 73 8 74 271 72 266 8.70e-56 181
Msa0755850 AT4G17460.1 55.747 174 66 5 74 237 77 249 3.18e-52 172
Msa0755850 AT2G01430.1 55.556 126 54 1 115 240 130 253 7.36e-41 142
Msa0755850 AT1G70920.2 51.852 135 54 2 116 246 27 154 2.28e-36 127
Msa0755850 AT1G70920.1 53.846 130 49 2 116 241 57 179 2.54e-36 129
Msa0755850 AT5G06710.4 70.732 82 20 2 96 175 162 241 4.40e-29 111
Msa0755850 AT2G01430.2 57.692 78 31 1 115 192 130 205 1.53e-21 90.1
Msa0755850 AT1G26960.1 41.593 113 66 0 116 228 63 175 1.89e-18 82.8
Msa0755850 AT1G69780.1 45.833 96 52 0 116 211 77 172 6.06e-18 82.0
Msa0755850 AT5G15150.1 42.500 120 62 2 98 213 92 208 9.89e-18 81.6
Msa0755850 AT3G01220.1 40.984 122 64 2 96 213 63 180 4.85e-17 79.3
Msa0755850 AT3G01470.1 47.312 93 42 1 124 209 68 160 8.73e-17 78.6
Msa0755850 AT5G65310.1 43.000 100 50 1 119 211 67 166 2.63e-15 74.7
Msa0755850 AT5G65310.2 43.000 100 50 1 119 211 49 148 2.92e-15 74.3
Msa0755850 AT4G40060.1 43.299 97 51 1 122 214 57 153 3.91e-15 74.3
Msa0755850 AT2G22430.1 44.792 96 49 1 122 213 60 155 2.17e-14 72.4
Msa0755850 AT5G03790.1 32.653 147 96 2 124 267 77 223 4.19e-14 70.5
Msa0755850 AT1G27045.4 46.875 96 44 1 124 212 68 163 4.96e-14 70.5
Msa0755850 AT1G27045.1 50.000 88 44 0 124 211 68 155 5.66e-14 69.7
Msa0755850 AT2G46680.1 42.424 99 53 1 121 215 29 127 7.52e-14 70.1
Msa0755850 AT2G46680.2 40.625 96 57 0 121 216 29 124 8.02e-14 70.1
Msa0755850 AT1G27045.5 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa0755850 AT1G27045.3 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa0755850 AT1G27045.2 57.576 66 28 0 124 189 17 82 1.21e-13 67.8
Msa0755850 AT2G18550.1 44.000 100 55 1 112 210 48 147 3.78e-13 67.4
Msa0755850 AT2G36610.1 42.857 98 48 2 123 212 70 167 4.70e-13 66.6
Msa0755850 AT5G03790.2 37.931 116 64 2 124 231 77 192 1.24e-11 62.8
Msa0755850 AT4G36740.1 43.678 87 49 0 124 210 55 141 1.25e-11 63.2
Msa0755850 AT4G36740.2 43.678 87 49 0 124 210 56 142 1.27e-11 63.2
Msa0755850 AT3G61890.1 42.353 85 49 0 127 211 33 117 2.72e-11 62.4

Find 86 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTCAAGTATCAAAATA+TGG 0.178104 5_2:-9672929 Msa0755850:exon
CGTACCTGGCTCTCCGATTC+TGG 0.197577 5_2:+9672279 None:intergenic
GATTCTCTTCACCTTGTTCT+AGG 0.242496 5_2:-9672889 Msa0755850:CDS
AAACATTAACAGACGAAAAT+AGG 0.283618 5_2:-9671465 Msa0755850:CDS
TAATATGGTAAGGTTTATAA+AGG 0.296837 5_2:+9672986 None:intergenic
TGGGTGGGTGGGTGAGTGGG+TGG 0.300359 5_2:+9673062 None:intergenic
GCGTTGGGTGGGTGGGTGAG+TGG 0.302963 5_2:+9673058 None:intergenic
GGATTGTAGAAATGAGTATT+TGG 0.305343 5_2:+9671277 None:intergenic
AAGCAATAGTGATTGTTCTT+TGG 0.306534 5_2:+9672525 None:intergenic
GAATGGAAAATTAGATAATA+TGG 0.323643 5_2:+9672971 None:intergenic
TGGGTGGGTGAGTGGGTGGG+TGG 0.344223 5_2:+9673066 None:intergenic
TGGCTCGTTGGAGGTGGAAT+AGG 0.345900 5_2:+9672804 None:intergenic
CGAAAATAGGAGGCTCAAAA+AGG 0.353329 5_2:-9671452 Msa0755850:CDS
TAGCGAGACAGTTGAATCTA+AGG 0.358273 5_2:-9672325 Msa0755850:CDS
GTGGTGGTAGTTATTTCCTT+TGG 0.358754 5_2:+9672841 None:intergenic
TATAAAGGGTTAGAAGAGAA+AGG 0.396145 5_2:+9673001 None:intergenic
CGTTGGGTGGGTGGGTGAGT+GGG 0.399585 5_2:+9673059 None:intergenic
ATAGGGATTCATGGTGGTGG+TGG 0.418056 5_2:+9672822 None:intergenic
AAGTTCCTCACCATAACCTT+TGG 0.418493 5_2:+9672723 None:intergenic
TATAAACATATAAATACAAT+AGG 0.419834 5_2:+9671047 None:intergenic
GATACTTGAGAGAAGAATGA+AGG 0.425151 5_2:+9672938 None:intergenic
GGGATTCATGGTGGTGGTGG+TGG 0.429866 5_2:+9672825 None:intergenic
AAACAAGCTCCCAAAGGTTA+TGG 0.433046 5_2:-9672733 Msa0755850:CDS
AAGAAGAAGTAGAAGAAGAG+AGG 0.435022 5_2:-9672612 Msa0755850:CDS
GGCTCGTTGGAGGTGGAATA+GGG 0.435231 5_2:+9672805 None:intergenic
GGCCACGACAAGTTGAAGTA+TGG 0.447393 5_2:-9672304 Msa0755850:CDS
GTTAATTCATCTTTCTCAAG+TGG 0.450640 5_2:-9672670 Msa0755850:CDS
TCCTTAACGTTAGGACTCTC+TGG 0.452116 5_2:-9672781 Msa0755850:CDS
TGAGAGAAGAATGAAGGAGG+TGG 0.453368 5_2:+9672944 None:intergenic
ACCAGAGAGTCCTAACGTTA+AGG 0.454957 5_2:+9672780 None:intergenic
TTGAAGTATGGTTCCAGAAT+CGG 0.456231 5_2:-9672292 Msa0755850:CDS
CGCGTCGCCGACGGTGGTGG+TGG 0.459139 5_2:-9671331 Msa0755850:CDS
ATGAAGGAGGTGGAGATGAA+TGG 0.459827 5_2:+9672954 None:intergenic
AATATGGTAAGGTTTATAAA+GGG 0.461988 5_2:+9672987 None:intergenic
TCTCTCAAGTATCAAAATAT+GGG 0.462893 5_2:-9672928 Msa0755850:exon
AGTTCCTCACCATAACCTTT+GGG 0.463230 5_2:+9672724 None:intergenic
CGCAAGAAGGGCAGATGGAG+AGG 0.463288 5_2:+9671365 None:intergenic
GGGTGGGTGGGTGAGTGGGT+GGG 0.473842 5_2:+9673063 None:intergenic
GGCCGCGTCGCCGACGGTGG+TGG 0.477523 5_2:-9671334 Msa0755850:CDS
GGTTCCAGAATCGGAGAGCC+AGG 0.479376 5_2:-9672283 Msa0755850:intron
ATAAAGGGTTAGAAGAGAAA+GGG 0.488973 5_2:+9673002 None:intergenic
TAAGGATGGCTCGTTGGAGG+TGG 0.501094 5_2:+9672798 None:intergenic
CAAATGCTAGAAAGAAACTT+AGG 0.503490 5_2:-9672552 Msa0755850:CDS
GGAGGTGGAATAGGGATTCA+TGG 0.513429 5_2:+9672813 None:intergenic
GAAAATTAGATAATATGGTA+AGG 0.514550 5_2:+9672976 None:intergenic
GGTTAGAAGAGAAAGGGAGG+TGG 0.515349 5_2:+9673008 None:intergenic
CGTTAAGGATGGCTCGTTGG+AGG 0.516004 5_2:+9672795 None:intergenic
AGAAGAAGTAGAAGAAGAGA+GGG 0.516839 5_2:-9672611 Msa0755850:CDS
CGGCCGAGTCTTTCGCAAGA+AGG 0.519322 5_2:+9671352 None:intergenic
CACCACCACCGTCGGCGACG+CGG 0.531823 5_2:+9671332 None:intergenic
AACGAGCCATCCTTAACGTT+AGG 0.533980 5_2:-9672790 Msa0755850:CDS
GGCCGAGTCTTTCGCAAGAA+GGG 0.542654 5_2:+9671353 None:intergenic
GAGAGTGCTGCAAGTGAAGA+GGG 0.544213 5_2:-9672647 Msa0755850:CDS
GAGAGGGTAGCTGCAGGCAT+AGG 0.545391 5_2:+9671382 None:intergenic
CAGATGGAGAGGGTAGCTGC+AGG 0.545980 5_2:+9671376 None:intergenic
TTAATTCATCTTTCTCAAGT+GGG 0.546761 5_2:-9672669 Msa0755850:CDS
TTTGTTTAACATGCTGCGGA+AGG 0.548799 5_2:+9671244 None:intergenic
GATGAATTAACAACACTATG+AGG 0.550657 5_2:+9672682 None:intergenic
CTCGGCCGCGTCGCCGACGG+TGG 0.550736 5_2:-9671337 Msa0755850:CDS
GAATACTTCTACTACTCCAA+AGG 0.557339 5_2:-9672857 Msa0755850:CDS
TAGTTTAGCTAATACTGTAG+AGG 0.570422 5_2:-9671117 Msa0755850:three_prime_UTR
ACTTGAGAGAAGAATGAAGG+AGG 0.571975 5_2:+9672941 None:intergenic
GGAGAGTGCTGCAAGTGAAG+AGG 0.575107 5_2:-9672648 Msa0755850:CDS
GAGCTTGTTTGTGATTTGTA+CGG 0.578033 5_2:+9672746 None:intergenic
GGAATAGGGATTCATGGTGG+TGG 0.578972 5_2:+9672819 None:intergenic
GAAATGAGTATTTGGAGCCA+TGG 0.579663 5_2:+9671285 None:intergenic
AAGGGTTAGAAGAGAAAGGG+AGG 0.581372 5_2:+9673005 None:intergenic
GCAAGAAGGGCAGATGGAGA+GGG 0.582206 5_2:+9671366 None:intergenic
ATTAGAACCACCACCACCGT+CGG 0.589643 5_2:+9671324 None:intergenic
TCTTTCGCAAGAAGGGCAGA+TGG 0.591761 5_2:+9671360 None:intergenic
GCTGCGGAAGGATTGTTGAA+AGG 0.595707 5_2:+9671256 None:intergenic
TGCCCTTCTTGCGAAAGACT+CGG 0.599355 5_2:-9671355 Msa0755850:CDS
AGTATTTGGAGCCATGGTGA+AGG 0.599655 5_2:+9671291 None:intergenic
AACCATACTTCAACTTGTCG+TGG 0.610138 5_2:+9672302 None:intergenic
GAGAGTCCTAACGTTAAGGA+TGG 0.616116 5_2:+9672784 None:intergenic
GTCTTTAGATTCTTAGAACG+AGG 0.616180 5_2:+9671009 None:intergenic
TAACGTTAAGGATGGCTCGT+TGG 0.618624 5_2:+9672792 None:intergenic
CATTAACAGACGAAAATAGG+AGG 0.634319 5_2:-9671462 Msa0755850:CDS
TAAAATCACTGCCTTCACCA+TGG 0.649046 5_2:-9671302 Msa0755850:CDS
AAAGCTGAAACAAACAGAGG+TGG 0.651647 5_2:-9671515 Msa0755850:CDS
AGCTCCCAAAGGTTATGGTG+AGG 0.658770 5_2:-9672728 Msa0755850:CDS
AATCACAAACAAGCTCCCAA+AGG 0.673939 5_2:-9672739 Msa0755850:CDS
GGTGGAATAGGGATTCATGG+TGG 0.677474 5_2:+9672816 None:intergenic
TCAAAGATAAACCTAGAACA+AGG 0.685669 5_2:+9672878 None:intergenic
GCAGGCATAGGCATGTACAA+AGG 0.695698 5_2:+9671394 None:intergenic
AACAAAGCTGAAACAAACAG+AGG 0.748355 5_2:-9671518 Msa0755850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATATTAATATTCTGT+TGG - chr5_2:9671567-9671586 Msa0755850:intron 10.0%
!! TCTTAAAAATCTTATATTTA+AGG - chr5_2:9671897-9671916 Msa0755850:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG - chr5_2:9672071-9672090 Msa0755850:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG - chr5_2:9672072-9672091 Msa0755850:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG + chr5_2:9672213-9672232 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG - chr5_2:9672866-9672885 Msa0755850:CDS 10.0%
!! TATAAACATATAAATACAAT+AGG + chr5_2:9672900-9672919 None:intergenic 10.0%
!! ATATTATATTAATATTCTGT+TGG - chr5_2:9671567-9671586 Msa0755850:intron 10.0%
!! TCTTAAAAATCTTATATTTA+AGG - chr5_2:9671897-9671916 Msa0755850:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG - chr5_2:9672071-9672090 Msa0755850:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG - chr5_2:9672072-9672091 Msa0755850:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG + chr5_2:9672213-9672232 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG - chr5_2:9672866-9672885 Msa0755850:CDS 10.0%
!! TATAAACATATAAATACAAT+AGG + chr5_2:9672900-9672919 None:intergenic 10.0%
!!! TGAGTTTTGTAAAAAAAAAA+AGG + chr5_2:9671979-9671998 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG + chr5_2:9672150-9672169 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG - chr5_2:9672265-9672284 Msa0755850:intron 15.0%
!!! TGAGTTTTGTAAAAAAAAAA+AGG + chr5_2:9671979-9671998 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG + chr5_2:9672150-9672169 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG - chr5_2:9672265-9672284 Msa0755850:intron 15.0%
!! AATATGGTAAGGTTTATAAA+GGG + chr5_2:9670960-9670979 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG + chr5_2:9670961-9670980 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG + chr5_2:9670971-9670990 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG + chr5_2:9670976-9670995 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG + chr5_2:9671728-9671747 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG - chr5_2:9671854-9671873 Msa0755850:intron 20.0%
!! CCTATATGTAAAATAAATAG+AGG + chr5_2:9672044-9672063 None:intergenic 20.0%
!!! CCTCTATTTATTTTACATAT+AGG - chr5_2:9672041-9672060 Msa0755850:intron 20.0%
!! TAAAAGAGAGAGAAAAAATT+AGG - chr5_2:9672100-9672119 Msa0755850:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG + chr5_2:9672259-9672278 None:intergenic 20.0%
!! AATATGGTAAGGTTTATAAA+GGG + chr5_2:9670960-9670979 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG + chr5_2:9670961-9670980 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG + chr5_2:9670971-9670990 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG + chr5_2:9670976-9670995 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG + chr5_2:9671728-9671747 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG - chr5_2:9671854-9671873 Msa0755850:intron 20.0%
!! CCTATATGTAAAATAAATAG+AGG + chr5_2:9672044-9672063 None:intergenic 20.0%
!!! CCTCTATTTATTTTACATAT+AGG - chr5_2:9672041-9672060 Msa0755850:intron 20.0%
!! TAAAAGAGAGAGAAAAAATT+AGG - chr5_2:9672100-9672119 Msa0755850:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG + chr5_2:9672259-9672278 None:intergenic 20.0%
!! ATGAATACAAGACTTTTTGT+GGG + chr5_2:9670913-9670932 None:intergenic 25.0%
!! AATGAATACAAGACTTTTTG+TGG + chr5_2:9670914-9670933 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG - chr5_2:9671015-9671034 Msa0755850:three_prime_UTR 25.0%
! TCTCTCAAGTATCAAAATAT+GGG - chr5_2:9671016-9671035 Msa0755850:three_prime_UTR 25.0%
! TTAATTCATCTTTCTCAAGT+GGG - chr5_2:9671275-9671294 Msa0755850:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG + chr5_2:9671478-9671497 None:intergenic 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG - chr5_2:9672268-9672287 Msa0755850:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG - chr5_2:9672269-9672288 Msa0755850:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG - chr5_2:9672479-9672498 Msa0755850:intron 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG + chr5_2:9672707-9672726 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG + chr5_2:9672756-9672775 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG - chr5_2:9672761-9672780 Msa0755850:CDS 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG - chr5_2:9672977-9672996 Msa0755850:five_prime_UTR 25.0%
!! ATGAATACAAGACTTTTTGT+GGG + chr5_2:9670913-9670932 None:intergenic 25.0%
!! AATGAATACAAGACTTTTTG+TGG + chr5_2:9670914-9670933 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG - chr5_2:9671015-9671034 Msa0755850:three_prime_UTR 25.0%
! TCTCTCAAGTATCAAAATAT+GGG - chr5_2:9671016-9671035 Msa0755850:three_prime_UTR 25.0%
! TTAATTCATCTTTCTCAAGT+GGG - chr5_2:9671275-9671294 Msa0755850:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG + chr5_2:9671478-9671497 None:intergenic 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG - chr5_2:9672268-9672287 Msa0755850:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG - chr5_2:9672269-9672288 Msa0755850:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG - chr5_2:9672479-9672498 Msa0755850:intron 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG + chr5_2:9672707-9672726 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG + chr5_2:9672756-9672775 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG - chr5_2:9672761-9672780 Msa0755850:CDS 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG - chr5_2:9672977-9672996 Msa0755850:five_prime_UTR 25.0%
! TGAATACAAGACTTTTTGTG+GGG + chr5_2:9670912-9670931 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG + chr5_2:9670945-9670964 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG + chr5_2:9670946-9670965 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG + chr5_2:9671069-9671088 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG + chr5_2:9671265-9671284 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG - chr5_2:9671274-9671293 Msa0755850:CDS 30.0%
CAAATGCTAGAAAGAAACTT+AGG - chr5_2:9671392-9671411 Msa0755850:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG + chr5_2:9671422-9671441 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG - chr5_2:9672352-9672371 Msa0755850:intron 30.0%
AATAAATGTTGGTGCATGTT+TGG - chr5_2:9672363-9672382 Msa0755850:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG + chr5_2:9672670-9672689 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG + chr5_2:9672757-9672776 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG - chr5_2:9672754-9672773 Msa0755850:CDS 30.0%
CCTCAACCAAAAAAATACAA+TGG + chr5_2:9672763-9672782 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG - chr5_2:9672760-9672779 Msa0755850:CDS 30.0%
! TATATACGTTTTGCTAAGCT+AGG - chr5_2:9672787-9672806 Msa0755850:CDS 30.0%
! ATATACGTTTTGCTAAGCTA+GGG - chr5_2:9672788-9672807 Msa0755850:CDS 30.0%
TAGTTTAGCTAATACTGTAG+AGG - chr5_2:9672827-9672846 Msa0755850:CDS 30.0%
! TGAATACAAGACTTTTTGTG+GGG + chr5_2:9670912-9670931 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG + chr5_2:9670945-9670964 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG + chr5_2:9670946-9670965 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG + chr5_2:9671069-9671088 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG + chr5_2:9671265-9671284 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG - chr5_2:9671274-9671293 Msa0755850:CDS 30.0%
CAAATGCTAGAAAGAAACTT+AGG - chr5_2:9671392-9671411 Msa0755850:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG + chr5_2:9671422-9671441 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG - chr5_2:9672352-9672371 Msa0755850:intron 30.0%
AATAAATGTTGGTGCATGTT+TGG - chr5_2:9672363-9672382 Msa0755850:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG + chr5_2:9672670-9672689 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG + chr5_2:9672757-9672776 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG - chr5_2:9672754-9672773 Msa0755850:CDS 30.0%
CCTCAACCAAAAAAATACAA+TGG + chr5_2:9672763-9672782 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG - chr5_2:9672760-9672779 Msa0755850:CDS 30.0%
! TATATACGTTTTGCTAAGCT+AGG - chr5_2:9672787-9672806 Msa0755850:CDS 30.0%
! ATATACGTTTTGCTAAGCTA+GGG - chr5_2:9672788-9672807 Msa0755850:CDS 30.0%
TAGTTTAGCTAATACTGTAG+AGG - chr5_2:9672827-9672846 Msa0755850:CDS 30.0%
! GAATACAAGACTTTTTGTGG+GGG + chr5_2:9670911-9670930 None:intergenic 35.0%
GATACTTGAGAGAAGAATGA+AGG + chr5_2:9671009-9671028 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG - chr5_2:9671087-9671106 Msa0755850:three_prime_UTR 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG + chr5_2:9671201-9671220 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG - chr5_2:9671332-9671351 Msa0755850:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG - chr5_2:9671333-9671352 Msa0755850:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG - chr5_2:9671652-9671671 Msa0755850:intron 35.0%
! GACTCTATAATGGTGATGTA+CGG + chr5_2:9671718-9671737 None:intergenic 35.0%
CTGTCTAGCTACTAAATTTG+TGG + chr5_2:9671803-9671822 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG - chr5_2:9672302-9672321 Msa0755850:CDS 35.0%
ACAAATCCAAAAGCAAAGGA+AGG + chr5_2:9672311-9672330 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG - chr5_2:9672310-9672329 Msa0755850:CDS 35.0%
AACCACAAATCCAAAAGCAA+AGG + chr5_2:9672315-9672334 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG - chr5_2:9672323-9672342 Msa0755850:CDS 35.0%
AACAAAGCTGAAACAAACAG+AGG - chr5_2:9672426-9672445 Msa0755850:intron 35.0%
CATTAACAGACGAAAATAGG+AGG - chr5_2:9672482-9672501 Msa0755850:intron 35.0%
GTCTTTAGATTCTTAGAACG+AGG + chr5_2:9672938-9672957 None:intergenic 35.0%
! GAATACAAGACTTTTTGTGG+GGG + chr5_2:9670911-9670930 None:intergenic 35.0%
GATACTTGAGAGAAGAATGA+AGG + chr5_2:9671009-9671028 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG - chr5_2:9671087-9671106 Msa0755850:three_prime_UTR 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG + chr5_2:9671201-9671220 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG - chr5_2:9671332-9671351 Msa0755850:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG - chr5_2:9671333-9671352 Msa0755850:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG - chr5_2:9671652-9671671 Msa0755850:intron 35.0%
! GACTCTATAATGGTGATGTA+CGG + chr5_2:9671718-9671737 None:intergenic 35.0%
CTGTCTAGCTACTAAATTTG+TGG + chr5_2:9671803-9671822 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG - chr5_2:9672302-9672321 Msa0755850:CDS 35.0%
ACAAATCCAAAAGCAAAGGA+AGG + chr5_2:9672311-9672330 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG - chr5_2:9672310-9672329 Msa0755850:CDS 35.0%
AACCACAAATCCAAAAGCAA+AGG + chr5_2:9672315-9672334 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG - chr5_2:9672323-9672342 Msa0755850:CDS 35.0%
AACAAAGCTGAAACAAACAG+AGG - chr5_2:9672426-9672445 Msa0755850:intron 35.0%
CATTAACAGACGAAAATAGG+AGG - chr5_2:9672482-9672501 Msa0755850:intron 35.0%
GTCTTTAGATTCTTAGAACG+AGG + chr5_2:9672938-9672957 None:intergenic 35.0%
ACTTGAGAGAAGAATGAAGG+AGG + chr5_2:9671006-9671025 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG - chr5_2:9671055-9671074 Msa0755850:three_prime_UTR 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG + chr5_2:9671106-9671125 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG - chr5_2:9671205-9671224 Msa0755850:three_prime_UTR 40.0%
AAACAAGCTCCCAAAGGTTA+TGG - chr5_2:9671211-9671230 Msa0755850:three_prime_UTR 40.0%
AGTTCCTCACCATAACCTTT+GGG + chr5_2:9671223-9671242 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG + chr5_2:9671224-9671243 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG - chr5_2:9671619-9671638 Msa0755850:intron 40.0%
AACCATACTTCAACTTGTCG+TGG + chr5_2:9671645-9671664 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG - chr5_2:9672429-9672448 Msa0755850:intron 40.0%
CGAAAATAGGAGGCTCAAAA+AGG - chr5_2:9672492-9672511 Msa0755850:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG - chr5_2:9672642-9672661 Msa0755850:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG + chr5_2:9672662-9672681 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG + chr5_2:9672703-9672722 None:intergenic 40.0%
ACTTGAGAGAAGAATGAAGG+AGG + chr5_2:9671006-9671025 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG - chr5_2:9671055-9671074 Msa0755850:three_prime_UTR 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG + chr5_2:9671106-9671125 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG - chr5_2:9671205-9671224 Msa0755850:three_prime_UTR 40.0%
AAACAAGCTCCCAAAGGTTA+TGG - chr5_2:9671211-9671230 Msa0755850:three_prime_UTR 40.0%
AGTTCCTCACCATAACCTTT+GGG + chr5_2:9671223-9671242 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG + chr5_2:9671224-9671243 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG - chr5_2:9671619-9671638 Msa0755850:intron 40.0%
AACCATACTTCAACTTGTCG+TGG + chr5_2:9671645-9671664 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG - chr5_2:9672429-9672448 Msa0755850:intron 40.0%
CGAAAATAGGAGGCTCAAAA+AGG - chr5_2:9672492-9672511 Msa0755850:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG - chr5_2:9672642-9672661 Msa0755850:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG + chr5_2:9672662-9672681 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG + chr5_2:9672703-9672722 None:intergenic 40.0%
AAGGGTTAGAAGAGAAAGGG+AGG + chr5_2:9670942-9670961 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG + chr5_2:9670993-9671012 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG + chr5_2:9671003-9671022 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG + chr5_2:9671155-9671174 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG - chr5_2:9671154-9671173 Msa0755850:three_prime_UTR 45.0%
GAGAGTCCTAACGTTAAGGA+TGG + chr5_2:9671163-9671182 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG - chr5_2:9671163-9671182 Msa0755850:three_prime_UTR 45.0%
ACCAGAGAGTCCTAACGTTA+AGG + chr5_2:9671167-9671186 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG + chr5_2:9672656-9672675 None:intergenic 45.0%
AAGGGTTAGAAGAGAAAGGG+AGG + chr5_2:9670942-9670961 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG + chr5_2:9670993-9671012 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG + chr5_2:9671003-9671022 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG + chr5_2:9671155-9671174 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG - chr5_2:9671154-9671173 Msa0755850:three_prime_UTR 45.0%
GAGAGTCCTAACGTTAAGGA+TGG + chr5_2:9671163-9671182 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG - chr5_2:9671163-9671182 Msa0755850:three_prime_UTR 45.0%
ACCAGAGAGTCCTAACGTTA+AGG + chr5_2:9671167-9671186 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG + chr5_2:9672656-9672675 None:intergenic 45.0%
!!! AACTTATAATAAATAAATTT+TGG - chr5_2:9672389-9672408 Msa0755850:intron 5.0%
!!! AACTTATAATAAATAAATTT+TGG - chr5_2:9672389-9672408 Msa0755850:intron 5.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG + chr5_2:9670904-9670923 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG + chr5_2:9670905-9670924 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG + chr5_2:9670939-9670958 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG + chr5_2:9671125-9671144 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG + chr5_2:9671128-9671147 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG + chr5_2:9671131-9671150 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG + chr5_2:9671134-9671153 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG - chr5_2:9671216-9671235 Msa0755850:three_prime_UTR 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG - chr5_2:9671297-9671316 Msa0755850:CDS 50.0%
! GGCCACGACAAGTTGAAGTA+TGG - chr5_2:9671640-9671659 Msa0755850:intron 50.0%
AGTTTATGTCCGTCCGTACC+TGG + chr5_2:9671682-9671701 None:intergenic 50.0%
GCAGGCATAGGCATGTACAA+AGG + chr5_2:9672553-9672572 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG + chr5_2:9672587-9672606 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG - chr5_2:9672589-9672608 Msa0755850:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG + chr5_2:9672623-9672642 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG + chr5_2:9672691-9672710 None:intergenic 50.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG + chr5_2:9670904-9670923 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG + chr5_2:9670905-9670924 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG + chr5_2:9670939-9670958 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG + chr5_2:9671125-9671144 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG + chr5_2:9671128-9671147 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG + chr5_2:9671131-9671150 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG + chr5_2:9671134-9671153 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG - chr5_2:9671216-9671235 Msa0755850:three_prime_UTR 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG - chr5_2:9671297-9671316 Msa0755850:CDS 50.0%
! GGCCACGACAAGTTGAAGTA+TGG - chr5_2:9671640-9671659 Msa0755850:intron 50.0%
AGTTTATGTCCGTCCGTACC+TGG + chr5_2:9671682-9671701 None:intergenic 50.0%
GCAGGCATAGGCATGTACAA+AGG + chr5_2:9672553-9672572 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG + chr5_2:9672587-9672606 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG - chr5_2:9672589-9672608 Msa0755850:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG + chr5_2:9672623-9672642 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG + chr5_2:9672691-9672710 None:intergenic 50.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG + chr5_2:9670900-9670919 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG + chr5_2:9671142-9671161 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG + chr5_2:9671143-9671162 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG + chr5_2:9671149-9671168 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG + chr5_2:9671152-9671171 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG - chr5_2:9671296-9671315 Msa0755850:CDS 55.0%
CAGAATCGGAGAGCCAGGTA+CGG - chr5_2:9671666-9671685 Msa0755850:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG + chr5_2:9672581-9672600 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG + chr5_2:9672594-9672613 None:intergenic 55.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG + chr5_2:9670900-9670919 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG + chr5_2:9671142-9671161 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG + chr5_2:9671143-9671162 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG + chr5_2:9671149-9671168 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG + chr5_2:9671152-9671171 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG - chr5_2:9671296-9671315 Msa0755850:CDS 55.0%
CAGAATCGGAGAGCCAGGTA+CGG - chr5_2:9671666-9671685 Msa0755850:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG + chr5_2:9672581-9672600 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG + chr5_2:9672594-9672613 None:intergenic 55.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG + chr5_2:9670901-9670920 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG + chr5_2:9671122-9671141 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG - chr5_2:9671661-9671680 Msa0755850:intron 60.0%
! CGTACCTGGCTCTCCGATTC+TGG + chr5_2:9671668-9671687 None:intergenic 60.0%
ATCGGAGAGCCAGGTACGGA+CGG - chr5_2:9671670-9671689 Msa0755850:intron 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG + chr5_2:9672565-9672584 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG + chr5_2:9672571-9672590 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG + chr5_2:9672582-9672601 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG + chr5_2:9672595-9672614 None:intergenic 60.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG + chr5_2:9670901-9670920 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG + chr5_2:9671122-9671141 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG - chr5_2:9671661-9671680 Msa0755850:intron 60.0%
! CGTACCTGGCTCTCCGATTC+TGG + chr5_2:9671668-9671687 None:intergenic 60.0%
ATCGGAGAGCCAGGTACGGA+CGG - chr5_2:9671670-9671689 Msa0755850:intron 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG + chr5_2:9672565-9672584 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG + chr5_2:9672571-9672590 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG + chr5_2:9672582-9672601 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG + chr5_2:9672595-9672614 None:intergenic 60.0%
CGTTGGGTGGGTGGGTGAGT+GGG + chr5_2:9670888-9670907 None:intergenic 65.0%
CGTTGGGTGGGTGGGTGAGT+GGG + chr5_2:9670888-9670907 None:intergenic 65.0%
GGGTGGGTGGGTGAGTGGGT+GGG + chr5_2:9670884-9670903 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG + chr5_2:9670885-9670904 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG + chr5_2:9670889-9670908 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG + chr5_2:9670896-9670915 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG + chr5_2:9670897-9670916 None:intergenic 70.0%
GGGTGGGTGGGTGAGTGGGT+GGG + chr5_2:9670884-9670903 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG + chr5_2:9670885-9670904 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG + chr5_2:9670889-9670908 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG + chr5_2:9670896-9670915 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG + chr5_2:9670897-9670916 None:intergenic 70.0%
AGACTCGGCCGCGTCGCCGA+CGG - chr5_2:9672604-9672623 Msa0755850:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG + chr5_2:9672615-9672634 None:intergenic 75.0%
AGACTCGGCCGCGTCGCCGA+CGG - chr5_2:9672604-9672623 Msa0755850:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG + chr5_2:9672615-9672634 None:intergenic 75.0%
!! CGCGTCGCCGACGGTGGTGG+TGG - chr5_2:9672613-9672632 Msa0755850:CDS 80.0%
!! CGCGTCGCCGACGGTGGTGG+TGG - chr5_2:9672613-9672632 Msa0755850:CDS 80.0%
! CTCGGCCGCGTCGCCGACGG+TGG - chr5_2:9672607-9672626 Msa0755850:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG - chr5_2:9672610-9672629 Msa0755850:CDS 85.0%
! CTCGGCCGCGTCGCCGACGG+TGG - chr5_2:9672607-9672626 Msa0755850:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG - chr5_2:9672610-9672629 Msa0755850:CDS 85.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9670881 9673085 9670881 ID=Msa0755850;Name=Msa0755850
chr5_2 mRNA 9670881 9673085 9670881 ID=Msa0755850-mRNA-1;Parent=Msa0755850;Name=Msa0755850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=153|1|1|1|1|1|3|368|271
chr5_2 exon 9670881 9671540 9670881 ID=Msa0755850-mRNA-1:exon:4505;Parent=Msa0755850-mRNA-1
chr5_2 exon 9672284 9672363 9672284 ID=Msa0755850-mRNA-1:exon:4504;Parent=Msa0755850-mRNA-1
chr5_2 exon 9672489 9673085 9672489 ID=Msa0755850-mRNA-1:exon:4503;Parent=Msa0755850-mRNA-1
chr5_2 five_prime_UTR 9672933 9673085 9672933 ID=Msa0755850-mRNA-1:five_prime_utr;Parent=Msa0755850-mRNA-1
chr5_2 CDS 9672489 9672932 9672489 ID=Msa0755850-mRNA-1:cds;Parent=Msa0755850-mRNA-1
chr5_2 CDS 9672284 9672363 9672284 ID=Msa0755850-mRNA-1:cds;Parent=Msa0755850-mRNA-1
chr5_2 CDS 9671249 9671540 9671249 ID=Msa0755850-mRNA-1:cds;Parent=Msa0755850-mRNA-1
chr5_2 three_prime_UTR 9670881 9671248 9670881 ID=Msa0755850-mRNA-1:three_prime_utr;Parent=Msa0755850-mRNA-1
Gene Sequence

>Msa0755850

ATGGGTCTTAATAATGATCAAGATTCTCTTCACCTTGTTCTAGGTTTATCTTTGAATACTTCTACTACTCCAAAGGAAATAACTACCACCACCACCACCATGAATCCCTATTCCACCTCCAACGAGCCATCCTTAACGTTAGGACTCTCTGGTGAGAGTTATAACCGTACAAATCACAAACAAGCTCCCAAAGGTTATGGTGAGGAACTTTGTAGACAAACTTCATCACCTCATAGTGTTGTTAATTCATCTTTCTCAAGTGGGAGAGTGCTGCAAGTGAAGAGGGAGAGAGATGAAGAAGAAGAAGTAGAAGAAGAGAGGGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGCTACAAATGCTAGAAAGAAACTTAGGCTTACCAAAGAACAATCACTATTGCTTGAAGAAAGCTTCAAACTACATAGCACTCTCAATCCTAAACAAAAACAAGCTTTAGCGAGACAGTTGAATCTAAGGCCACGACAAGTTGAAGTATGGTTCCAGAATCGGAGAGCCAGAACAAAGCTGAAACAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGTTGTGAAACATTAACAGACGAAAATAGGAGGCTCAAAAAGGAGTTGCAAGAGTTGAAATCATTGAAAGTAGCACAACCTTTGTACATGCCTATGCCTGCAGCTACCCTCTCCATCTGCCCTTCTTGCGAAAGACTCGGCCGCGTCGCCGACGGTGGTGGTGGTTCTAATAAAATCACTGCCTTCACCATGGCTCCAAATACTCATTTCTACAATCCTTTCAACAATCCTTCCGCAGCATGTTAA
Protein sequence

>Msa0755850

MGLNNDQDSLHLVLGLSLNTSTTPKEITTTTTTMNPYSTSNEPSLTLGLSGESYNRTNHKQAPKGYGEELCRQTSSPHSVVNSSFSSGRVLQVKRERDEEEEVEEERVSSRVSDEDEDATNARKKLRLTKEQSLLLEESFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKSLKVAQPLYMPMPAATLSICPSCERLGRVADGGGGSNKITAFTMAPNTHFYNPFNNPSAAC*