AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1377690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377690 MtrunA17_Chr5g0400781 97.059 272 5 3 1 271 1 270 0.0 528
Msa1377690 MtrunA17_Chr4g0054421 64.360 289 67 9 1 271 1 271 3.11e-98 288
Msa1377690 MtrunA17_Chr2g0308611 70.548 146 40 2 94 237 169 313 1.68e-64 205
Msa1377690 MtrunA17_Chr1g0175651 72.388 134 36 1 104 237 135 267 1.84e-63 201
Msa1377690 MtrunA17_Chr1g0151971 57.868 197 73 6 73 266 83 272 2.61e-63 200
Msa1377690 MtrunA17_Chr5g0399491 59.067 193 66 5 47 237 69 250 1.11e-62 199
Msa1377690 MtrunA17_Chr7g0258831 70.455 132 39 0 106 237 142 273 1.21e-62 199
Msa1377690 MtrunA17_Chr4g0055851 64.242 165 48 5 74 237 80 234 3.67e-61 194
Msa1377690 MtrunA17_Chr8g0335131 61.765 170 55 3 74 235 91 258 5.39e-60 192
Msa1377690 MtrunA17_Chr3g0135331 57.222 180 67 4 93 266 117 292 1.39e-50 168
Msa1377690 MtrunA17_Chr4g0044091 58.955 134 49 1 123 250 64 197 6.30e-48 158
Msa1377690 MtrunA17_Chr2g0299031 52.349 149 67 2 91 238 52 197 9.31e-41 140
Msa1377690 MtrunA17_Chr4g0071411 64.655 116 33 3 126 235 90 203 9.37e-38 132
Msa1377690 MtrunA17_Chr5g0416391 38.411 151 79 2 73 215 24 168 7.42e-20 86.7
Msa1377690 MtrunA17_Chr7g0217111 45.833 96 52 0 115 210 71 166 1.02e-18 83.6
Msa1377690 MtrunA17_Chr8g0362151 42.500 120 62 1 96 215 56 168 1.12e-18 83.6
Msa1377690 MtrunA17_Chr6g0453021 45.794 107 51 1 111 210 83 189 1.51e-18 83.2
Msa1377690 MtrunA17_Chr6g0450991 48.913 92 47 0 124 215 67 158 3.07e-18 82.4
Msa1377690 MtrunA17_Chr5g0415941 40.559 143 72 4 78 211 43 181 8.69e-18 81.6
Msa1377690 MtrunA17_Chr7g0265521 40.187 107 63 1 105 210 43 149 1.66e-16 76.6
Msa1377690 MtrunA17_Chr8g0362751 46.809 94 43 1 124 210 89 182 1.95e-16 77.4
Msa1377690 MtrunA17_Chr3g0119291 47.368 95 43 1 124 211 59 153 4.15e-16 75.9
Msa1377690 MtrunA17_Chr4g0060031 45.833 96 52 0 116 211 87 182 5.20e-16 76.6
Msa1377690 MtrunA17_Chr3g0123691 42.718 103 52 1 116 211 52 154 1.04e-15 75.5
Msa1377690 MtrunA17_Chr8g0381741 46.392 97 45 1 122 211 52 148 1.59e-15 75.1
Msa1377690 MtrunA17_Chr1g0179581 44.186 86 48 0 121 206 25 110 6.61e-15 69.3
Msa1377690 MtrunA17_Chr8g0346251 35.878 131 72 3 128 251 45 170 1.01e-12 66.2
Msa1377690 MtrunA17_Chr3g0127511 43.617 94 52 1 127 220 41 133 5.14e-12 64.3
Msa1377690 MtrunA17_Chr5g0403701 44.000 100 51 1 119 218 48 142 2.07e-11 62.0
Msa1377690 MtrunA17_Chr5g0403691 44.086 93 52 0 119 211 48 140 3.25e-11 61.6
Msa1377690 MtrunA17_Chr5g0410711 32.500 120 81 0 101 220 69 188 4.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377690 AT4G37790.1 60.690 290 83 9 1 271 1 278 5.83e-93 276
Msa1377690 AT2G22800.1 57.093 289 91 8 1 271 1 274 1.14e-83 252
Msa1377690 AT5G06710.1 68.707 147 42 2 96 240 162 306 2.52e-65 207
Msa1377690 AT3G60390.1 59.091 176 58 3 74 235 99 274 8.47e-60 192
Msa1377690 AT4G16780.1 66.901 142 45 2 96 236 102 242 1.46e-59 191
Msa1377690 AT2G44910.1 54.822 197 76 4 49 236 84 276 2.78e-57 186
Msa1377690 AT5G47370.1 51.659 211 73 8 74 271 72 266 8.70e-56 181
Msa1377690 AT4G17460.1 55.747 174 66 5 74 237 77 249 3.18e-52 172
Msa1377690 AT2G01430.1 55.556 126 54 1 115 240 130 253 7.36e-41 142
Msa1377690 AT1G70920.2 51.852 135 54 2 116 246 27 154 2.28e-36 127
Msa1377690 AT1G70920.1 53.846 130 49 2 116 241 57 179 2.54e-36 129
Msa1377690 AT5G06710.4 70.732 82 20 2 96 175 162 241 4.40e-29 111
Msa1377690 AT2G01430.2 57.692 78 31 1 115 192 130 205 1.53e-21 90.1
Msa1377690 AT1G26960.1 41.593 113 66 0 116 228 63 175 1.89e-18 82.8
Msa1377690 AT1G69780.1 45.833 96 52 0 116 211 77 172 6.06e-18 82.0
Msa1377690 AT5G15150.1 42.500 120 62 2 98 213 92 208 9.89e-18 81.6
Msa1377690 AT3G01220.1 40.984 122 64 2 96 213 63 180 4.85e-17 79.3
Msa1377690 AT3G01470.1 47.312 93 42 1 124 209 68 160 8.73e-17 78.6
Msa1377690 AT5G65310.1 43.000 100 50 1 119 211 67 166 2.63e-15 74.7
Msa1377690 AT5G65310.2 43.000 100 50 1 119 211 49 148 2.92e-15 74.3
Msa1377690 AT4G40060.1 43.299 97 51 1 122 214 57 153 3.91e-15 74.3
Msa1377690 AT2G22430.1 44.792 96 49 1 122 213 60 155 2.17e-14 72.4
Msa1377690 AT5G03790.1 32.653 147 96 2 124 267 77 223 4.19e-14 70.5
Msa1377690 AT1G27045.4 46.875 96 44 1 124 212 68 163 4.96e-14 70.5
Msa1377690 AT1G27045.1 50.000 88 44 0 124 211 68 155 5.66e-14 69.7
Msa1377690 AT2G46680.1 42.424 99 53 1 121 215 29 127 7.52e-14 70.1
Msa1377690 AT2G46680.2 40.625 96 57 0 121 216 29 124 8.02e-14 70.1
Msa1377690 AT1G27045.5 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa1377690 AT1G27045.3 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa1377690 AT1G27045.2 57.576 66 28 0 124 189 17 82 1.21e-13 67.8
Msa1377690 AT2G18550.1 44.000 100 55 1 112 210 48 147 3.78e-13 67.4
Msa1377690 AT2G36610.1 42.857 98 48 2 123 212 70 167 4.70e-13 66.6
Msa1377690 AT5G03790.2 37.931 116 64 2 124 231 77 192 1.24e-11 62.8
Msa1377690 AT4G36740.1 43.678 87 49 0 124 210 55 141 1.25e-11 63.2
Msa1377690 AT4G36740.2 43.678 87 49 0 124 210 56 142 1.27e-11 63.2
Msa1377690 AT3G61890.1 42.353 85 49 0 127 211 33 117 2.72e-11 62.4

Find 85 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTCAAGTATCAAAATA+TGG 0.178104 tig0019970:+25201 Msa1377690:exon
CGTACCTGGCTCTCCGATTC+TGG 0.186509 tig0019970:-25841 None:intergenic
GATTCTCTTCACCTTGTTCT+AGG 0.242496 tig0019970:+25241 Msa1377690:CDS
AAACATTAACAGACGAAAAT+AGG 0.283618 tig0019970:+26656 Msa1377690:CDS
TAATATGGTAAGGTTTATAA+AGG 0.296837 tig0019970:-25144 None:intergenic
TGGGTGGGTGGGTGAGTGGG+TGG 0.300359 tig0019970:-25068 None:intergenic
GCGTTGGGTGGGTGGGTGAG+TGG 0.302963 tig0019970:-25072 None:intergenic
GGATTGTAGAAATGAGTATT+TGG 0.305343 tig0019970:-26844 None:intergenic
AAGCAATAGTGATTGTTCTT+TGG 0.306534 tig0019970:-25605 None:intergenic
GAATGGAAAATTAGATAATA+TGG 0.323643 tig0019970:-25159 None:intergenic
TGGGTGGGTGAGTGGGTGGG+TGG 0.344223 tig0019970:-25064 None:intergenic
TGGCTCGTTGGAGGTGGAAT+AGG 0.345900 tig0019970:-25326 None:intergenic
CGAAAATAGGAGGCTCAAAA+AGG 0.353329 tig0019970:+26669 Msa1377690:CDS
TAGCGAGACAGTTGAATCTA+AGG 0.358273 tig0019970:+25795 Msa1377690:CDS
GTGGTGGTAGTTATTTCCTT+TGG 0.358754 tig0019970:-25289 None:intergenic
TATAAAGGGTTAGAAGAGAA+AGG 0.396145 tig0019970:-25129 None:intergenic
CGTTGGGTGGGTGGGTGAGT+GGG 0.399585 tig0019970:-25071 None:intergenic
ATAGGGATTCATGGTGGTGG+TGG 0.418056 tig0019970:-25308 None:intergenic
AAGTTCCTCACCATAACCTT+TGG 0.418493 tig0019970:-25407 None:intergenic
GATACTTGAGAGAAGAATGA+AGG 0.425151 tig0019970:-25192 None:intergenic
GGGATTCATGGTGGTGGTGG+TGG 0.429866 tig0019970:-25305 None:intergenic
AAACAAGCTCCCAAAGGTTA+TGG 0.433046 tig0019970:+25397 Msa1377690:CDS
AAGAAGAAGTAGAAGAAGAG+AGG 0.435022 tig0019970:+25518 Msa1377690:CDS
GGCTCGTTGGAGGTGGAATA+GGG 0.435231 tig0019970:-25325 None:intergenic
GGCCGCGACAAGTTGAAGTA+TGG 0.440361 tig0019970:+25816 Msa1377690:CDS
GTTAATTCATCTTTCTCAAG+TGG 0.450640 tig0019970:+25460 Msa1377690:CDS
TCCTTAACGTTAGGACTCTC+TGG 0.452116 tig0019970:+25349 Msa1377690:CDS
TGAGAGAAGAATGAAGGAGG+TGG 0.453368 tig0019970:-25186 None:intergenic
ACCAGAGAGTCCTAACGTTA+AGG 0.454957 tig0019970:-25350 None:intergenic
TTGAAGTATGGTTCCAGAAT+CGG 0.456231 tig0019970:+25828 Msa1377690:CDS
CGCGTCGCCGACGGTGGTGG+TGG 0.459139 tig0019970:+26790 Msa1377690:CDS
ATGAAGGAGGTGGAGATGAA+TGG 0.459827 tig0019970:-25176 None:intergenic
AATATGGTAAGGTTTATAAA+GGG 0.461988 tig0019970:-25143 None:intergenic
TCTCTCAAGTATCAAAATAT+GGG 0.462893 tig0019970:+25202 Msa1377690:exon
AGTTCCTCACCATAACCTTT+GGG 0.463230 tig0019970:-25406 None:intergenic
CGCAAGAAGGGCAGATGGAG+AGG 0.463288 tig0019970:-26756 None:intergenic
GGGTGGGTGGGTGAGTGGGT+GGG 0.473842 tig0019970:-25067 None:intergenic
GGCCGCGTCGCCGACGGTGG+TGG 0.477523 tig0019970:+26787 Msa1377690:CDS
GGTTCCAGAATCGGAGAGCC+AGG 0.479376 tig0019970:+25837 Msa1377690:CDS
ATAAAGGGTTAGAAGAGAAA+GGG 0.488973 tig0019970:-25128 None:intergenic
CAAATGCTAGAAAGAAACTA+AGG 0.489611 tig0019970:+25578 Msa1377690:CDS
TAAGGATGGCTCGTTGGAGG+TGG 0.501094 tig0019970:-25332 None:intergenic
GGAGGTGGAATAGGGATTCA+TGG 0.513429 tig0019970:-25317 None:intergenic
GAAAATTAGATAATATGGTA+AGG 0.514550 tig0019970:-25154 None:intergenic
GGTTAGAAGAGAAAGGGAGG+TGG 0.515349 tig0019970:-25122 None:intergenic
CGTTAAGGATGGCTCGTTGG+AGG 0.516004 tig0019970:-25335 None:intergenic
AGAAGAAGTAGAAGAAGAGA+GGG 0.516839 tig0019970:+25519 Msa1377690:CDS
CGGCCGAGTCTTTCGCAAGA+AGG 0.519322 tig0019970:-26769 None:intergenic
CACCACCACCGTCGGCGACG+CGG 0.531823 tig0019970:-26789 None:intergenic
AACGAGCCATCCTTAACGTT+AGG 0.533980 tig0019970:+25340 Msa1377690:CDS
GGCCGAGTCTTTCGCAAGAA+GGG 0.542654 tig0019970:-26768 None:intergenic
GAGAGTGCTGCAAGTGAAGA+GGG 0.544213 tig0019970:+25483 Msa1377690:CDS
GAGAGGGTAGCTGCAGGCAT+AGG 0.545391 tig0019970:-26739 None:intergenic
CAGATGGAGAGGGTAGCTGC+AGG 0.545980 tig0019970:-26745 None:intergenic
TTAATTCATCTTTCTCAAGT+GGG 0.546761 tig0019970:+25461 Msa1377690:CDS
TTTGTTTAACATGCTGCGGA+AGG 0.548799 tig0019970:-26877 None:intergenic
GATGAATTAACAACACTATG+AGG 0.550657 tig0019970:-25448 None:intergenic
CTCGGCCGCGTCGCCGACGG+TGG 0.550736 tig0019970:+26784 Msa1377690:CDS
GAATACTTCTACTACTCCAA+AGG 0.557339 tig0019970:+25273 Msa1377690:CDS
TAGTTTAGCTAATACTGTAG+AGG 0.570422 tig0019970:+27004 Msa1377690:three_prime_UTR
ACTTGAGAGAAGAATGAAGG+AGG 0.571975 tig0019970:-25189 None:intergenic
GGAGAGTGCTGCAAGTGAAG+AGG 0.575107 tig0019970:+25482 Msa1377690:CDS
GAGCTTGTTTGTGATTTGTA+CGG 0.578033 tig0019970:-25384 None:intergenic
GGAATAGGGATTCATGGTGG+TGG 0.578972 tig0019970:-25311 None:intergenic
GAAATGAGTATTTGGAGCCA+TGG 0.579663 tig0019970:-26836 None:intergenic
AAGGGTTAGAAGAGAAAGGG+AGG 0.581372 tig0019970:-25125 None:intergenic
GCAAGAAGGGCAGATGGAGA+GGG 0.582206 tig0019970:-26755 None:intergenic
ATTAGAACCACCACCACCGT+CGG 0.589643 tig0019970:-26797 None:intergenic
TCTTTCGCAAGAAGGGCAGA+TGG 0.591761 tig0019970:-26761 None:intergenic
GCTGCGGAAGGATTGTTGAA+AGG 0.595707 tig0019970:-26865 None:intergenic
TGCCCTTCTTGCGAAAGACT+CGG 0.599355 tig0019970:+26766 Msa1377690:CDS
AGTATTTGGAGCCATGGTGA+AGG 0.599655 tig0019970:-26830 None:intergenic
AACCATACTTCAACTTGTCG+CGG 0.615090 tig0019970:-25818 None:intergenic
GAGAGTCCTAACGTTAAGGA+TGG 0.616116 tig0019970:-25346 None:intergenic
GTCTTTAGATTCTTAGAACG+AGG 0.616180 tig0019970:-27112 None:intergenic
TAACGTTAAGGATGGCTCGT+TGG 0.618624 tig0019970:-25338 None:intergenic
CATTAACAGACGAAAATAGG+AGG 0.634319 tig0019970:+26659 Msa1377690:CDS
TAAAATCACTGCCTTCACCA+TGG 0.649046 tig0019970:+26819 Msa1377690:CDS
AAAGCTGAAACAAACAGAGG+TGG 0.651647 tig0019970:+26606 Msa1377690:CDS
AGCTCCCAAAGGTTATGGTG+AGG 0.658770 tig0019970:+25402 Msa1377690:CDS
AATCACAAACAAGCTCCCAA+AGG 0.673939 tig0019970:+25391 Msa1377690:CDS
GGTGGAATAGGGATTCATGG+TGG 0.677474 tig0019970:-25314 None:intergenic
TCAAAGATAAACCTAGAACA+AGG 0.685669 tig0019970:-25252 None:intergenic
GCAGGCATAGGCATGTACAA+AGG 0.695698 tig0019970:-26727 None:intergenic
AACAAAGCTGAAACAAACAG+AGG 0.748355 tig0019970:+26603 Msa1377690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATATTAATATTCTGT+TGG + tig0019970:25743-25762 Msa1377690:intron 10.0%
!! CTTAAAAAATCTTATATTTA+AGG + tig0019970:26070-26089 Msa1377690:intron 10.0%
!! ATATGTATTAAAATAAATAG+AGG - tig0019970:26217-26236 None:intergenic 10.0%
!!! CTATTTATTTTAATACATAT+AGG + tig0019970:26217-26236 Msa1377690:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG + tig0019970:26247-26266 Msa1377690:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG + tig0019970:26248-26267 Msa1377690:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG - tig0019970:26390-26409 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG + tig0019970:27043-27062 Msa1377690:three_prime_UTR 10.0%
!! ATATTATATTAATATTCTGT+TGG + tig0019970:25743-25762 Msa1377690:intron 10.0%
!! CTTAAAAAATCTTATATTTA+AGG + tig0019970:26070-26089 Msa1377690:intron 10.0%
!! ATATGTATTAAAATAAATAG+AGG - tig0019970:26217-26236 None:intergenic 10.0%
!!! CTATTTATTTTAATACATAT+AGG + tig0019970:26217-26236 Msa1377690:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG + tig0019970:26247-26266 Msa1377690:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG + tig0019970:26248-26267 Msa1377690:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG - tig0019970:26390-26409 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG + tig0019970:27043-27062 Msa1377690:three_prime_UTR 10.0%
!!! ATGAGTTTTGTAAAAAAAAA+AGG - tig0019970:26153-26172 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG - tig0019970:26327-26346 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG + tig0019970:26442-26461 Msa1377690:intron 15.0%
!!! ATGAGTTTTGTAAAAAAAAA+AGG - tig0019970:26153-26172 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG - tig0019970:26327-26346 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG + tig0019970:26442-26461 Msa1377690:intron 15.0%
!! AATATGGTAAGGTTTATAAA+GGG - tig0019970:25146-25165 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG - tig0019970:25147-25166 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG - tig0019970:25157-25176 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG - tig0019970:25162-25181 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG - tig0019970:25900-25919 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG + tig0019970:26026-26045 Msa1377690:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG - tig0019970:26436-26455 None:intergenic 20.0%
!! AATATGGTAAGGTTTATAAA+GGG - tig0019970:25146-25165 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG - tig0019970:25147-25166 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG - tig0019970:25157-25176 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG - tig0019970:25162-25181 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG - tig0019970:25900-25919 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG + tig0019970:26026-26045 Msa1377690:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG - tig0019970:26436-26455 None:intergenic 20.0%
!! ATGAATACAAGACTTTTTGT+GGG - tig0019970:25099-25118 None:intergenic 25.0%
!! AATGAATACAAGACTTTTTG+TGG - tig0019970:25100-25119 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG + tig0019970:25201-25220 Msa1377690:exon 25.0%
! TCTCTCAAGTATCAAAATAT+GGG + tig0019970:25202-25221 Msa1377690:exon 25.0%
! TTAATTCATCTTTCTCAAGT+GGG + tig0019970:25461-25480 Msa1377690:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG - tig0019970:25664-25683 None:intergenic 25.0%
! TGAAAGAGAGAGAAAAAATT+AGG + tig0019970:26277-26296 Msa1377690:intron 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG + tig0019970:26445-26464 Msa1377690:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG + tig0019970:26446-26465 Msa1377690:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG + tig0019970:26656-26675 Msa1377690:CDS 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG - tig0019970:26884-26903 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG - tig0019970:26933-26952 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG + tig0019970:26938-26957 Msa1377690:three_prime_UTR 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG + tig0019970:27153-27172 Msa1377690:three_prime_UTR 25.0%
!! ATGAATACAAGACTTTTTGT+GGG - tig0019970:25099-25118 None:intergenic 25.0%
!! AATGAATACAAGACTTTTTG+TGG - tig0019970:25100-25119 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG + tig0019970:25201-25220 Msa1377690:exon 25.0%
! TCTCTCAAGTATCAAAATAT+GGG + tig0019970:25202-25221 Msa1377690:exon 25.0%
! TTAATTCATCTTTCTCAAGT+GGG + tig0019970:25461-25480 Msa1377690:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG - tig0019970:25664-25683 None:intergenic 25.0%
! TGAAAGAGAGAGAAAAAATT+AGG + tig0019970:26277-26296 Msa1377690:intron 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG + tig0019970:26445-26464 Msa1377690:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG + tig0019970:26446-26465 Msa1377690:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG + tig0019970:26656-26675 Msa1377690:CDS 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG - tig0019970:26884-26903 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG - tig0019970:26933-26952 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG + tig0019970:26938-26957 Msa1377690:three_prime_UTR 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG + tig0019970:27153-27172 Msa1377690:three_prime_UTR 25.0%
! TGAATACAAGACTTTTTGTG+GGG - tig0019970:25098-25117 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG - tig0019970:25131-25150 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG - tig0019970:25132-25151 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG - tig0019970:25255-25274 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG - tig0019970:25451-25470 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG + tig0019970:25460-25479 Msa1377690:CDS 30.0%
CAAATGCTAGAAAGAAACTA+AGG + tig0019970:25578-25597 Msa1377690:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG - tig0019970:25608-25627 None:intergenic 30.0%
! CTGTCTAGCTACTAAATTTT+TGG - tig0019970:25975-25994 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG + tig0019970:26529-26548 Msa1377690:intron 30.0%
AATAAATGTTGGTGCATGTT+TGG + tig0019970:26540-26559 Msa1377690:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG - tig0019970:26847-26866 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG - tig0019970:26934-26953 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG + tig0019970:26931-26950 Msa1377690:three_prime_UTR 30.0%
CCTCAACCAAAAAAATACAA+TGG - tig0019970:26940-26959 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG + tig0019970:26937-26956 Msa1377690:three_prime_UTR 30.0%
! TATATACGTTTTGCTAAGCT+AGG + tig0019970:26964-26983 Msa1377690:three_prime_UTR 30.0%
! ATATACGTTTTGCTAAGCTA+GGG + tig0019970:26965-26984 Msa1377690:three_prime_UTR 30.0%
TAGTTTAGCTAATACTGTAG+AGG + tig0019970:27004-27023 Msa1377690:three_prime_UTR 30.0%
! TGAATACAAGACTTTTTGTG+GGG - tig0019970:25098-25117 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG - tig0019970:25131-25150 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG - tig0019970:25132-25151 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG - tig0019970:25255-25274 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG - tig0019970:25451-25470 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG + tig0019970:25460-25479 Msa1377690:CDS 30.0%
CAAATGCTAGAAAGAAACTA+AGG + tig0019970:25578-25597 Msa1377690:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG - tig0019970:25608-25627 None:intergenic 30.0%
! CTGTCTAGCTACTAAATTTT+TGG - tig0019970:25975-25994 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG + tig0019970:26529-26548 Msa1377690:intron 30.0%
AATAAATGTTGGTGCATGTT+TGG + tig0019970:26540-26559 Msa1377690:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG - tig0019970:26847-26866 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG - tig0019970:26934-26953 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG + tig0019970:26931-26950 Msa1377690:three_prime_UTR 30.0%
CCTCAACCAAAAAAATACAA+TGG - tig0019970:26940-26959 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG + tig0019970:26937-26956 Msa1377690:three_prime_UTR 30.0%
! TATATACGTTTTGCTAAGCT+AGG + tig0019970:26964-26983 Msa1377690:three_prime_UTR 30.0%
! ATATACGTTTTGCTAAGCTA+GGG + tig0019970:26965-26984 Msa1377690:three_prime_UTR 30.0%
TAGTTTAGCTAATACTGTAG+AGG + tig0019970:27004-27023 Msa1377690:three_prime_UTR 30.0%
! GAATACAAGACTTTTTGTGG+GGG - tig0019970:25097-25116 None:intergenic 35.0%
GATACTTGAGAGAAGAATGA+AGG - tig0019970:25195-25214 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG + tig0019970:25273-25292 Msa1377690:CDS 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG - tig0019970:25387-25406 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG + tig0019970:25518-25537 Msa1377690:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG + tig0019970:25519-25538 Msa1377690:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG + tig0019970:25828-25847 Msa1377690:CDS 35.0%
AAAAAGTTTATGTCCGTACC+TGG - tig0019970:25858-25877 None:intergenic 35.0%
! GACTCTATAATGGTGATGTA+CGG - tig0019970:25890-25909 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG + tig0019970:26479-26498 Msa1377690:intron 35.0%
ACAAATCCAAAAGCAAAGGA+AGG - tig0019970:26488-26507 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG + tig0019970:26487-26506 Msa1377690:intron 35.0%
AACCACAAATCCAAAAGCAA+AGG - tig0019970:26492-26511 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG + tig0019970:26500-26519 Msa1377690:intron 35.0%
AACAAAGCTGAAACAAACAG+AGG + tig0019970:26603-26622 Msa1377690:CDS 35.0%
CATTAACAGACGAAAATAGG+AGG + tig0019970:26659-26678 Msa1377690:CDS 35.0%
GTCTTTAGATTCTTAGAACG+AGG - tig0019970:27115-27134 None:intergenic 35.0%
! GAATACAAGACTTTTTGTGG+GGG - tig0019970:25097-25116 None:intergenic 35.0%
GATACTTGAGAGAAGAATGA+AGG - tig0019970:25195-25214 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG + tig0019970:25273-25292 Msa1377690:CDS 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG - tig0019970:25387-25406 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG + tig0019970:25518-25537 Msa1377690:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG + tig0019970:25519-25538 Msa1377690:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG + tig0019970:25828-25847 Msa1377690:CDS 35.0%
AAAAAGTTTATGTCCGTACC+TGG - tig0019970:25858-25877 None:intergenic 35.0%
! GACTCTATAATGGTGATGTA+CGG - tig0019970:25890-25909 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG + tig0019970:26479-26498 Msa1377690:intron 35.0%
ACAAATCCAAAAGCAAAGGA+AGG - tig0019970:26488-26507 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG + tig0019970:26487-26506 Msa1377690:intron 35.0%
AACCACAAATCCAAAAGCAA+AGG - tig0019970:26492-26511 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG + tig0019970:26500-26519 Msa1377690:intron 35.0%
AACAAAGCTGAAACAAACAG+AGG + tig0019970:26603-26622 Msa1377690:CDS 35.0%
CATTAACAGACGAAAATAGG+AGG + tig0019970:26659-26678 Msa1377690:CDS 35.0%
GTCTTTAGATTCTTAGAACG+AGG - tig0019970:27115-27134 None:intergenic 35.0%
ACTTGAGAGAAGAATGAAGG+AGG - tig0019970:25192-25211 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG + tig0019970:25241-25260 Msa1377690:CDS 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG - tig0019970:25292-25311 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG + tig0019970:25391-25410 Msa1377690:CDS 40.0%
AAACAAGCTCCCAAAGGTTA+TGG + tig0019970:25397-25416 Msa1377690:CDS 40.0%
AGTTCCTCACCATAACCTTT+GGG - tig0019970:25409-25428 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG - tig0019970:25410-25429 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG + tig0019970:25795-25814 Msa1377690:CDS 40.0%
AACCATACTTCAACTTGTCG+CGG - tig0019970:25821-25840 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG + tig0019970:26606-26625 Msa1377690:CDS 40.0%
CGAAAATAGGAGGCTCAAAA+AGG + tig0019970:26669-26688 Msa1377690:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG + tig0019970:26819-26838 Msa1377690:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG - tig0019970:26839-26858 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG - tig0019970:26880-26899 None:intergenic 40.0%
ACTTGAGAGAAGAATGAAGG+AGG - tig0019970:25192-25211 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG + tig0019970:25241-25260 Msa1377690:CDS 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG - tig0019970:25292-25311 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG + tig0019970:25391-25410 Msa1377690:CDS 40.0%
AAACAAGCTCCCAAAGGTTA+TGG + tig0019970:25397-25416 Msa1377690:CDS 40.0%
AGTTCCTCACCATAACCTTT+GGG - tig0019970:25409-25428 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG - tig0019970:25410-25429 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG + tig0019970:25795-25814 Msa1377690:CDS 40.0%
AACCATACTTCAACTTGTCG+CGG - tig0019970:25821-25840 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG + tig0019970:26606-26625 Msa1377690:CDS 40.0%
CGAAAATAGGAGGCTCAAAA+AGG + tig0019970:26669-26688 Msa1377690:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG + tig0019970:26819-26838 Msa1377690:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG - tig0019970:26839-26858 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG - tig0019970:26880-26899 None:intergenic 40.0%
AAGGGTTAGAAGAGAAAGGG+AGG - tig0019970:25128-25147 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG - tig0019970:25179-25198 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG - tig0019970:25189-25208 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG - tig0019970:25341-25360 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG + tig0019970:25340-25359 Msa1377690:CDS 45.0%
GAGAGTCCTAACGTTAAGGA+TGG - tig0019970:25349-25368 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG + tig0019970:25349-25368 Msa1377690:CDS 45.0%
ACCAGAGAGTCCTAACGTTA+AGG - tig0019970:25353-25372 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG - tig0019970:26833-26852 None:intergenic 45.0%
AAGGGTTAGAAGAGAAAGGG+AGG - tig0019970:25128-25147 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG - tig0019970:25179-25198 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG - tig0019970:25189-25208 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG - tig0019970:25341-25360 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG + tig0019970:25340-25359 Msa1377690:CDS 45.0%
GAGAGTCCTAACGTTAAGGA+TGG - tig0019970:25349-25368 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG + tig0019970:25349-25368 Msa1377690:CDS 45.0%
ACCAGAGAGTCCTAACGTTA+AGG - tig0019970:25353-25372 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG - tig0019970:26833-26852 None:intergenic 45.0%
!!! AACTTATATTAAATAAATTT+TGG + tig0019970:26566-26585 Msa1377690:intron 5.0%
!!! AACTTATATTAAATAAATTT+TGG + tig0019970:26566-26585 Msa1377690:intron 5.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG - tig0019970:25090-25109 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG - tig0019970:25091-25110 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG - tig0019970:25125-25144 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG - tig0019970:25311-25330 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG - tig0019970:25314-25333 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG - tig0019970:25317-25336 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG - tig0019970:25320-25339 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG + tig0019970:25402-25421 Msa1377690:CDS 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG + tig0019970:25483-25502 Msa1377690:CDS 50.0%
GCAGGCATAGGCATGTACAA+AGG - tig0019970:26730-26749 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG - tig0019970:26764-26783 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG + tig0019970:26766-26785 Msa1377690:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG - tig0019970:26800-26819 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG - tig0019970:26868-26887 None:intergenic 50.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG - tig0019970:25090-25109 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG - tig0019970:25091-25110 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG - tig0019970:25125-25144 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG - tig0019970:25311-25330 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG - tig0019970:25314-25333 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG - tig0019970:25317-25336 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG - tig0019970:25320-25339 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG + tig0019970:25402-25421 Msa1377690:CDS 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG + tig0019970:25483-25502 Msa1377690:CDS 50.0%
GCAGGCATAGGCATGTACAA+AGG - tig0019970:26730-26749 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG - tig0019970:26764-26783 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG + tig0019970:26766-26785 Msa1377690:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG - tig0019970:26800-26819 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG - tig0019970:26868-26887 None:intergenic 50.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG - tig0019970:25086-25105 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG - tig0019970:25328-25347 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG - tig0019970:25329-25348 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG - tig0019970:25335-25354 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG - tig0019970:25338-25357 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG + tig0019970:25482-25501 Msa1377690:CDS 55.0%
! GGCCGCGACAAGTTGAAGTA+TGG + tig0019970:25816-25835 Msa1377690:CDS 55.0%
CAGAATCGGAGAGCCAGGTA+CGG + tig0019970:25842-25861 Msa1377690:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG - tig0019970:26758-26777 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG - tig0019970:26771-26790 None:intergenic 55.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG - tig0019970:25086-25105 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG - tig0019970:25328-25347 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG - tig0019970:25329-25348 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG - tig0019970:25335-25354 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG - tig0019970:25338-25357 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG + tig0019970:25482-25501 Msa1377690:CDS 55.0%
! GGCCGCGACAAGTTGAAGTA+TGG + tig0019970:25816-25835 Msa1377690:CDS 55.0%
CAGAATCGGAGAGCCAGGTA+CGG + tig0019970:25842-25861 Msa1377690:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG - tig0019970:26758-26777 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG - tig0019970:26771-26790 None:intergenic 55.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG - tig0019970:25087-25106 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG - tig0019970:25308-25327 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG + tig0019970:25837-25856 Msa1377690:CDS 60.0%
! CGTACCTGGCTCTCCGATTC+TGG - tig0019970:25844-25863 None:intergenic 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG - tig0019970:26742-26761 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG - tig0019970:26748-26767 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG - tig0019970:26759-26778 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG - tig0019970:26772-26791 None:intergenic 60.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG - tig0019970:25087-25106 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG - tig0019970:25308-25327 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG + tig0019970:25837-25856 Msa1377690:CDS 60.0%
! CGTACCTGGCTCTCCGATTC+TGG - tig0019970:25844-25863 None:intergenic 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG - tig0019970:26742-26761 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG - tig0019970:26748-26767 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG - tig0019970:26759-26778 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG - tig0019970:26772-26791 None:intergenic 60.0%
CGTTGGGTGGGTGGGTGAGT+GGG - tig0019970:25074-25093 None:intergenic 65.0%
CGTTGGGTGGGTGGGTGAGT+GGG - tig0019970:25074-25093 None:intergenic 65.0%
GGGTGGGTGGGTGAGTGGGT+GGG - tig0019970:25070-25089 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG - tig0019970:25071-25090 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG - tig0019970:25075-25094 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG - tig0019970:25082-25101 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG - tig0019970:25083-25102 None:intergenic 70.0%
GGGTGGGTGGGTGAGTGGGT+GGG - tig0019970:25070-25089 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG - tig0019970:25071-25090 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG - tig0019970:25075-25094 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG - tig0019970:25082-25101 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG - tig0019970:25083-25102 None:intergenic 70.0%
AGACTCGGCCGCGTCGCCGA+CGG + tig0019970:26781-26800 Msa1377690:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG - tig0019970:26792-26811 None:intergenic 75.0%
AGACTCGGCCGCGTCGCCGA+CGG + tig0019970:26781-26800 Msa1377690:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG - tig0019970:26792-26811 None:intergenic 75.0%
!! CGCGTCGCCGACGGTGGTGG+TGG + tig0019970:26790-26809 Msa1377690:CDS 80.0%
!! CGCGTCGCCGACGGTGGTGG+TGG + tig0019970:26790-26809 Msa1377690:CDS 80.0%
! CTCGGCCGCGTCGCCGACGG+TGG + tig0019970:26784-26803 Msa1377690:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG + tig0019970:26787-26806 Msa1377690:CDS 85.0%
! CTCGGCCGCGTCGCCGACGG+TGG + tig0019970:26784-26803 Msa1377690:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG + tig0019970:26787-26806 Msa1377690:CDS 85.0%
Chromosome Type Strat End Strand Name
tig0019970 gene 25067 27261 25067 ID=Msa1377690;Name=Msa1377690
tig0019970 mRNA 25067 27261 25067 ID=Msa1377690-mRNA-1;Parent=Msa1377690;Name=Msa1377690-mRNA-1;_AED=0.03;_eAED=0.03;_QI=153|1|1|1|1|1|3|367|271
tig0019970 exon 25067 25663 25067 ID=Msa1377690-mRNA-1:exon:5749;Parent=Msa1377690-mRNA-1
tig0019970 exon 25779 25858 25779 ID=Msa1377690-mRNA-1:exon:5750;Parent=Msa1377690-mRNA-1
tig0019970 exon 26603 27261 26603 ID=Msa1377690-mRNA-1:exon:5751;Parent=Msa1377690-mRNA-1
tig0019970 five_prime_UTR 25067 25219 25067 ID=Msa1377690-mRNA-1:five_prime_utr;Parent=Msa1377690-mRNA-1
tig0019970 CDS 25220 25663 25220 ID=Msa1377690-mRNA-1:cds;Parent=Msa1377690-mRNA-1
tig0019970 CDS 25779 25858 25779 ID=Msa1377690-mRNA-1:cds;Parent=Msa1377690-mRNA-1
tig0019970 CDS 26603 26894 26603 ID=Msa1377690-mRNA-1:cds;Parent=Msa1377690-mRNA-1
tig0019970 three_prime_UTR 26895 27261 26895 ID=Msa1377690-mRNA-1:three_prime_utr;Parent=Msa1377690-mRNA-1
Gene Sequence

>Msa1377690

ATGGGTCTTAATAATGATCAAGATTCTCTTCACCTTGTTCTAGGTTTATCTTTGAATACTTCTACTACTCCAAAGGAAATAACTACCACCACCACCACCATGAATCCCTATTCCACCTCCAACGAGCCATCCTTAACGTTAGGACTCTCTGGTGAGAGTTATAACCGTACAAATCACAAACAAGCTCCCAAAGGTTATGGTGAGGAACTTTGTAGACAAACTTCATCACCTCATAGTGTTGTTAATTCATCTTTCTCAAGTGGGAGAGTGCTGCAAGTGAAGAGGGAGAGAGATGAAGAAGAAGAAGTAGAAGAAGAGAGGGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGCTACAAATGCTAGAAAGAAACTAAGGCTTACCAAAGAACAATCACTATTGCTTGAAGAAAGCTTCAAACTACATAGCACTCTCAATCCTAAACAAAAACAAGCTTTAGCGAGACAGTTGAATCTAAGGCCGCGACAAGTTGAAGTATGGTTCCAGAATCGGAGAGCCAGAACAAAGCTGAAACAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGTTGTGAAACATTAACAGACGAAAATAGGAGGCTCAAAAAGGAGTTGCAAGAGTTGAAATCATTGAAAGTAGCACAACCTTTGTACATGCCTATGCCTGCAGCTACCCTCTCCATCTGCCCTTCTTGCGAAAGACTCGGCCGCGTCGCCGACGGTGGTGGTGGTTCTAATAAAATCACTGCCTTCACCATGGCTCCAAATACTCATTTCTACAATCCTTTCAACAATCCTTCCGCAGCATGTTAA
Protein sequence

>Msa1377690

MGLNNDQDSLHLVLGLSLNTSTTPKEITTTTTTMNPYSTSNEPSLTLGLSGESYNRTNHKQAPKGYGEELCRQTSSPHSVVNSSFSSGRVLQVKRERDEEEEVEEERVSSRVSDEDEDATNARKKLRLTKEQSLLLEESFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKSLKVAQPLYMPMPAATLSICPSCERLGRVADGGGGSNKITAFTMAPNTHFYNPFNNPSAAC*