AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797550 MtrunA17_Chr5g0400781 97.059 272 5 3 1 271 1 270 0.0 528
Msa0797550 MtrunA17_Chr4g0054421 64.360 289 67 9 1 271 1 271 3.11e-98 288
Msa0797550 MtrunA17_Chr2g0308611 70.548 146 40 2 94 237 169 313 1.68e-64 205
Msa0797550 MtrunA17_Chr1g0175651 72.388 134 36 1 104 237 135 267 1.84e-63 201
Msa0797550 MtrunA17_Chr1g0151971 57.868 197 73 6 73 266 83 272 2.61e-63 200
Msa0797550 MtrunA17_Chr5g0399491 59.067 193 66 5 47 237 69 250 1.11e-62 199
Msa0797550 MtrunA17_Chr7g0258831 70.455 132 39 0 106 237 142 273 1.21e-62 199
Msa0797550 MtrunA17_Chr4g0055851 64.242 165 48 5 74 237 80 234 3.67e-61 194
Msa0797550 MtrunA17_Chr8g0335131 61.765 170 55 3 74 235 91 258 5.39e-60 192
Msa0797550 MtrunA17_Chr3g0135331 57.222 180 67 4 93 266 117 292 1.39e-50 168
Msa0797550 MtrunA17_Chr4g0044091 58.955 134 49 1 123 250 64 197 6.30e-48 158
Msa0797550 MtrunA17_Chr2g0299031 52.349 149 67 2 91 238 52 197 9.31e-41 140
Msa0797550 MtrunA17_Chr4g0071411 64.655 116 33 3 126 235 90 203 9.37e-38 132
Msa0797550 MtrunA17_Chr5g0416391 38.411 151 79 2 73 215 24 168 7.42e-20 86.7
Msa0797550 MtrunA17_Chr7g0217111 45.833 96 52 0 115 210 71 166 1.02e-18 83.6
Msa0797550 MtrunA17_Chr8g0362151 42.500 120 62 1 96 215 56 168 1.12e-18 83.6
Msa0797550 MtrunA17_Chr6g0453021 45.794 107 51 1 111 210 83 189 1.51e-18 83.2
Msa0797550 MtrunA17_Chr6g0450991 48.913 92 47 0 124 215 67 158 3.07e-18 82.4
Msa0797550 MtrunA17_Chr5g0415941 40.559 143 72 4 78 211 43 181 8.69e-18 81.6
Msa0797550 MtrunA17_Chr7g0265521 40.187 107 63 1 105 210 43 149 1.66e-16 76.6
Msa0797550 MtrunA17_Chr8g0362751 46.809 94 43 1 124 210 89 182 1.95e-16 77.4
Msa0797550 MtrunA17_Chr3g0119291 47.368 95 43 1 124 211 59 153 4.15e-16 75.9
Msa0797550 MtrunA17_Chr4g0060031 45.833 96 52 0 116 211 87 182 5.20e-16 76.6
Msa0797550 MtrunA17_Chr3g0123691 42.718 103 52 1 116 211 52 154 1.04e-15 75.5
Msa0797550 MtrunA17_Chr8g0381741 46.392 97 45 1 122 211 52 148 1.59e-15 75.1
Msa0797550 MtrunA17_Chr1g0179581 44.186 86 48 0 121 206 25 110 6.61e-15 69.3
Msa0797550 MtrunA17_Chr8g0346251 35.878 131 72 3 128 251 45 170 1.01e-12 66.2
Msa0797550 MtrunA17_Chr3g0127511 43.617 94 52 1 127 220 41 133 5.14e-12 64.3
Msa0797550 MtrunA17_Chr5g0403701 44.000 100 51 1 119 218 48 142 2.07e-11 62.0
Msa0797550 MtrunA17_Chr5g0403691 44.086 93 52 0 119 211 48 140 3.25e-11 61.6
Msa0797550 MtrunA17_Chr5g0410711 32.500 120 81 0 101 220 69 188 4.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797550 AT4G37790.1 60.690 290 83 9 1 271 1 278 5.83e-93 276
Msa0797550 AT2G22800.1 57.093 289 91 8 1 271 1 274 1.14e-83 252
Msa0797550 AT5G06710.1 68.707 147 42 2 96 240 162 306 2.52e-65 207
Msa0797550 AT3G60390.1 59.091 176 58 3 74 235 99 274 8.47e-60 192
Msa0797550 AT4G16780.1 66.901 142 45 2 96 236 102 242 1.46e-59 191
Msa0797550 AT2G44910.1 54.822 197 76 4 49 236 84 276 2.78e-57 186
Msa0797550 AT5G47370.1 51.659 211 73 8 74 271 72 266 8.70e-56 181
Msa0797550 AT4G17460.1 55.747 174 66 5 74 237 77 249 3.18e-52 172
Msa0797550 AT2G01430.1 55.556 126 54 1 115 240 130 253 7.36e-41 142
Msa0797550 AT1G70920.2 51.852 135 54 2 116 246 27 154 2.28e-36 127
Msa0797550 AT1G70920.1 53.846 130 49 2 116 241 57 179 2.54e-36 129
Msa0797550 AT5G06710.4 70.732 82 20 2 96 175 162 241 4.40e-29 111
Msa0797550 AT2G01430.2 57.692 78 31 1 115 192 130 205 1.53e-21 90.1
Msa0797550 AT1G26960.1 41.593 113 66 0 116 228 63 175 1.89e-18 82.8
Msa0797550 AT1G69780.1 45.833 96 52 0 116 211 77 172 6.06e-18 82.0
Msa0797550 AT5G15150.1 42.500 120 62 2 98 213 92 208 9.89e-18 81.6
Msa0797550 AT3G01220.1 40.984 122 64 2 96 213 63 180 4.85e-17 79.3
Msa0797550 AT3G01470.1 47.312 93 42 1 124 209 68 160 8.73e-17 78.6
Msa0797550 AT5G65310.1 43.000 100 50 1 119 211 67 166 2.63e-15 74.7
Msa0797550 AT5G65310.2 43.000 100 50 1 119 211 49 148 2.92e-15 74.3
Msa0797550 AT4G40060.1 43.299 97 51 1 122 214 57 153 3.91e-15 74.3
Msa0797550 AT2G22430.1 44.792 96 49 1 122 213 60 155 2.17e-14 72.4
Msa0797550 AT5G03790.1 32.653 147 96 2 124 267 77 223 4.19e-14 70.5
Msa0797550 AT1G27045.4 46.875 96 44 1 124 212 68 163 4.96e-14 70.5
Msa0797550 AT1G27045.1 50.000 88 44 0 124 211 68 155 5.66e-14 69.7
Msa0797550 AT2G46680.1 42.424 99 53 1 121 215 29 127 7.52e-14 70.1
Msa0797550 AT2G46680.2 40.625 96 57 0 121 216 29 124 8.02e-14 70.1
Msa0797550 AT1G27045.5 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa0797550 AT1G27045.3 57.576 66 28 0 124 189 25 90 9.47e-14 68.6
Msa0797550 AT1G27045.2 57.576 66 28 0 124 189 17 82 1.21e-13 67.8
Msa0797550 AT2G18550.1 44.000 100 55 1 112 210 48 147 3.78e-13 67.4
Msa0797550 AT2G36610.1 42.857 98 48 2 123 212 70 167 4.70e-13 66.6
Msa0797550 AT5G03790.2 37.931 116 64 2 124 231 77 192 1.24e-11 62.8
Msa0797550 AT4G36740.1 43.678 87 49 0 124 210 55 141 1.25e-11 63.2
Msa0797550 AT4G36740.2 43.678 87 49 0 124 210 56 142 1.27e-11 63.2
Msa0797550 AT3G61890.1 42.353 85 49 0 127 211 33 117 2.72e-11 62.4

Find 86 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTCAAGTATCAAAATA+TGG 0.178104 5_3:-9736492 Msa0797550:exon
CGTACCTGGCTCTCCGATTC+TGG 0.186509 5_3:+9735852 None:intergenic
GATTCTCTTCACCTTGTTCT+AGG 0.242496 5_3:-9736452 Msa0797550:CDS
AAACATTAACAGACGAAAAT+AGG 0.283618 5_3:-9735039 Msa0797550:CDS
TAATATGGTAAGGTTTATAA+AGG 0.296837 5_3:+9736549 None:intergenic
TGGGTGGGTGGGTGAGTGGG+TGG 0.300359 5_3:+9736625 None:intergenic
GCGTTGGGTGGGTGGGTGAG+TGG 0.302963 5_3:+9736621 None:intergenic
GGATTGTAGAAATGAGTATT+TGG 0.305343 5_3:+9734851 None:intergenic
AAGCAATAGTGATTGTTCTT+TGG 0.306534 5_3:+9736088 None:intergenic
GAATGGAAAATTAGATAATA+TGG 0.323643 5_3:+9736534 None:intergenic
TGGGTGGGTGAGTGGGTGGG+TGG 0.344223 5_3:+9736629 None:intergenic
TGGCTCGTTGGAGGTGGAAT+AGG 0.345900 5_3:+9736367 None:intergenic
CGAAAATAGGAGGCTCAAAA+AGG 0.353329 5_3:-9735026 Msa0797550:CDS
TAGCGAGACAGTTGAATCTA+AGG 0.358273 5_3:-9735898 Msa0797550:CDS
GTGGTGGTAGTTATTTCCTT+TGG 0.358754 5_3:+9736404 None:intergenic
TATAAAGGGTTAGAAGAGAA+AGG 0.396145 5_3:+9736564 None:intergenic
CGTTGGGTGGGTGGGTGAGT+GGG 0.399585 5_3:+9736622 None:intergenic
ATAGGGATTCATGGTGGTGG+TGG 0.418056 5_3:+9736385 None:intergenic
AAGTTCCTCACCATAACCTT+TGG 0.418493 5_3:+9736286 None:intergenic
TATAAACATATAAATACAAT+AGG 0.419834 5_3:+9734621 None:intergenic
GATACTTGAGAGAAGAATGA+AGG 0.425151 5_3:+9736501 None:intergenic
GGGATTCATGGTGGTGGTGG+TGG 0.429866 5_3:+9736388 None:intergenic
AAACAAGCTCCCAAAGGTTA+TGG 0.433046 5_3:-9736296 Msa0797550:CDS
AAGAAGAAGTAGAAGAAGAG+AGG 0.435022 5_3:-9736175 Msa0797550:CDS
GGCTCGTTGGAGGTGGAATA+GGG 0.435231 5_3:+9736368 None:intergenic
GGCCGCGACAAGTTGAAGTA+TGG 0.440361 5_3:-9735877 Msa0797550:CDS
GTTAATTCATCTTTCTCAAG+TGG 0.450640 5_3:-9736233 Msa0797550:CDS
TCCTTAACGTTAGGACTCTC+TGG 0.452116 5_3:-9736344 Msa0797550:CDS
TGAGAGAAGAATGAAGGAGG+TGG 0.453368 5_3:+9736507 None:intergenic
ACCAGAGAGTCCTAACGTTA+AGG 0.454957 5_3:+9736343 None:intergenic
TTGAAGTATGGTTCCAGAAT+CGG 0.456231 5_3:-9735865 Msa0797550:CDS
CGCGTCGCCGACGGTGGTGG+TGG 0.459139 5_3:-9734905 Msa0797550:CDS
ATGAAGGAGGTGGAGATGAA+TGG 0.459827 5_3:+9736517 None:intergenic
AATATGGTAAGGTTTATAAA+GGG 0.461988 5_3:+9736550 None:intergenic
TCTCTCAAGTATCAAAATAT+GGG 0.462893 5_3:-9736491 Msa0797550:exon
AGTTCCTCACCATAACCTTT+GGG 0.463230 5_3:+9736287 None:intergenic
CGCAAGAAGGGCAGATGGAG+AGG 0.463288 5_3:+9734939 None:intergenic
GGGTGGGTGGGTGAGTGGGT+GGG 0.473842 5_3:+9736626 None:intergenic
GGCCGCGTCGCCGACGGTGG+TGG 0.477523 5_3:-9734908 Msa0797550:CDS
GGTTCCAGAATCGGAGAGCC+AGG 0.479376 5_3:-9735856 Msa0797550:intron
ATAAAGGGTTAGAAGAGAAA+GGG 0.488973 5_3:+9736565 None:intergenic
CAAATGCTAGAAAGAAACTA+AGG 0.489611 5_3:-9736115 Msa0797550:CDS
TAAGGATGGCTCGTTGGAGG+TGG 0.501094 5_3:+9736361 None:intergenic
GGAGGTGGAATAGGGATTCA+TGG 0.513429 5_3:+9736376 None:intergenic
GAAAATTAGATAATATGGTA+AGG 0.514550 5_3:+9736539 None:intergenic
GGTTAGAAGAGAAAGGGAGG+TGG 0.515349 5_3:+9736571 None:intergenic
CGTTAAGGATGGCTCGTTGG+AGG 0.516004 5_3:+9736358 None:intergenic
AGAAGAAGTAGAAGAAGAGA+GGG 0.516839 5_3:-9736174 Msa0797550:CDS
CGGCCGAGTCTTTCGCAAGA+AGG 0.519322 5_3:+9734926 None:intergenic
CACCACCACCGTCGGCGACG+CGG 0.531823 5_3:+9734906 None:intergenic
AACGAGCCATCCTTAACGTT+AGG 0.533980 5_3:-9736353 Msa0797550:CDS
GGCCGAGTCTTTCGCAAGAA+GGG 0.542654 5_3:+9734927 None:intergenic
GAGAGTGCTGCAAGTGAAGA+GGG 0.544213 5_3:-9736210 Msa0797550:CDS
GAGAGGGTAGCTGCAGGCAT+AGG 0.545391 5_3:+9734956 None:intergenic
CAGATGGAGAGGGTAGCTGC+AGG 0.545980 5_3:+9734950 None:intergenic
TTAATTCATCTTTCTCAAGT+GGG 0.546761 5_3:-9736232 Msa0797550:CDS
TTTGTTTAACATGCTGCGGA+AGG 0.548799 5_3:+9734818 None:intergenic
GATGAATTAACAACACTATG+AGG 0.550657 5_3:+9736245 None:intergenic
CTCGGCCGCGTCGCCGACGG+TGG 0.550736 5_3:-9734911 Msa0797550:CDS
GAATACTTCTACTACTCCAA+AGG 0.557339 5_3:-9736420 Msa0797550:CDS
TAGTTTAGCTAATACTGTAG+AGG 0.570422 5_3:-9734691 Msa0797550:three_prime_UTR
ACTTGAGAGAAGAATGAAGG+AGG 0.571975 5_3:+9736504 None:intergenic
GGAGAGTGCTGCAAGTGAAG+AGG 0.575107 5_3:-9736211 Msa0797550:CDS
GAGCTTGTTTGTGATTTGTA+CGG 0.578033 5_3:+9736309 None:intergenic
GGAATAGGGATTCATGGTGG+TGG 0.578972 5_3:+9736382 None:intergenic
GAAATGAGTATTTGGAGCCA+TGG 0.579663 5_3:+9734859 None:intergenic
AAGGGTTAGAAGAGAAAGGG+AGG 0.581372 5_3:+9736568 None:intergenic
GCAAGAAGGGCAGATGGAGA+GGG 0.582206 5_3:+9734940 None:intergenic
ATTAGAACCACCACCACCGT+CGG 0.589643 5_3:+9734898 None:intergenic
TCTTTCGCAAGAAGGGCAGA+TGG 0.591761 5_3:+9734934 None:intergenic
GCTGCGGAAGGATTGTTGAA+AGG 0.595707 5_3:+9734830 None:intergenic
TGCCCTTCTTGCGAAAGACT+CGG 0.599355 5_3:-9734929 Msa0797550:CDS
AGTATTTGGAGCCATGGTGA+AGG 0.599655 5_3:+9734865 None:intergenic
AACCATACTTCAACTTGTCG+CGG 0.615090 5_3:+9735875 None:intergenic
GAGAGTCCTAACGTTAAGGA+TGG 0.616116 5_3:+9736347 None:intergenic
GTCTTTAGATTCTTAGAACG+AGG 0.616180 5_3:+9734583 None:intergenic
TAACGTTAAGGATGGCTCGT+TGG 0.618624 5_3:+9736355 None:intergenic
CATTAACAGACGAAAATAGG+AGG 0.634319 5_3:-9735036 Msa0797550:CDS
TAAAATCACTGCCTTCACCA+TGG 0.649046 5_3:-9734876 Msa0797550:CDS
AAAGCTGAAACAAACAGAGG+TGG 0.651647 5_3:-9735089 Msa0797550:CDS
AGCTCCCAAAGGTTATGGTG+AGG 0.658770 5_3:-9736291 Msa0797550:CDS
AATCACAAACAAGCTCCCAA+AGG 0.673939 5_3:-9736302 Msa0797550:CDS
GGTGGAATAGGGATTCATGG+TGG 0.677474 5_3:+9736379 None:intergenic
TCAAAGATAAACCTAGAACA+AGG 0.685669 5_3:+9736441 None:intergenic
GCAGGCATAGGCATGTACAA+AGG 0.695698 5_3:+9734968 None:intergenic
AACAAAGCTGAAACAAACAG+AGG 0.748355 5_3:-9735092 Msa0797550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATATTAATATTCTGT+TGG - chr5_3:9735131-9735150 Msa0797550:intron 10.0%
!! CTTAAAAAATCTTATATTTA+AGG - chr5_3:9735458-9735477 Msa0797550:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG - chr5_3:9735633-9735652 Msa0797550:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG - chr5_3:9735634-9735653 Msa0797550:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG + chr5_3:9735776-9735795 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG - chr5_3:9736429-9736448 Msa0797550:CDS 10.0%
!! TATAAACATATAAATACAAT+AGG + chr5_3:9736463-9736482 None:intergenic 10.0%
!! ATATTATATTAATATTCTGT+TGG - chr5_3:9735131-9735150 Msa0797550:intron 10.0%
!! CTTAAAAAATCTTATATTTA+AGG - chr5_3:9735458-9735477 Msa0797550:intron 10.0%
!!! ATTTATTTTCTTATCTTATA+AGG - chr5_3:9735633-9735652 Msa0797550:intron 10.0%
!!! TTTATTTTCTTATCTTATAA+GGG - chr5_3:9735634-9735653 Msa0797550:intron 10.0%
!! CTAATAAAAAATAGTTAATT+TGG + chr5_3:9735776-9735795 None:intergenic 10.0%
!!! ATTATAGTTACTTTTAATTT+TGG - chr5_3:9736429-9736448 Msa0797550:CDS 10.0%
!! TATAAACATATAAATACAAT+AGG + chr5_3:9736463-9736482 None:intergenic 10.0%
!!! TGAGTTTTGTAAAAAAAAAA+AGG + chr5_3:9735541-9735560 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG + chr5_3:9735713-9735732 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG - chr5_3:9735828-9735847 Msa0797550:intron 15.0%
!!! TGAGTTTTGTAAAAAAAAAA+AGG + chr5_3:9735541-9735560 None:intergenic 15.0%
!! AAAATTGCTCTTATAATTAT+TGG + chr5_3:9735713-9735732 None:intergenic 15.0%
!!! AAAAGTCTTATATTAAAGTA+AGG - chr5_3:9735828-9735847 Msa0797550:intron 15.0%
!!! ATAAATACAAGACTTTTTGT+GGG + chr5_3:9734487-9734506 None:intergenic 20.0%
!!! AATAAATACAAGACTTTTTG+TGG + chr5_3:9734488-9734507 None:intergenic 20.0%
!! AATATGGTAAGGTTTATAAA+GGG + chr5_3:9734534-9734553 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG + chr5_3:9734535-9734554 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG + chr5_3:9734545-9734564 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG + chr5_3:9734550-9734569 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG + chr5_3:9735288-9735307 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG - chr5_3:9735414-9735433 Msa0797550:intron 20.0%
!! CCTATATGTAAAATAAATAG+AGG + chr5_3:9735606-9735625 None:intergenic 20.0%
!!! CCTCTATTTATTTTACATAT+AGG - chr5_3:9735603-9735622 Msa0797550:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG + chr5_3:9735822-9735841 None:intergenic 20.0%
!!! ATAAATACAAGACTTTTTGT+GGG + chr5_3:9734487-9734506 None:intergenic 20.0%
!!! AATAAATACAAGACTTTTTG+TGG + chr5_3:9734488-9734507 None:intergenic 20.0%
!! AATATGGTAAGGTTTATAAA+GGG + chr5_3:9734534-9734553 None:intergenic 20.0%
!! TAATATGGTAAGGTTTATAA+AGG + chr5_3:9734535-9734554 None:intergenic 20.0%
!! GAAAATTAGATAATATGGTA+AGG + chr5_3:9734545-9734564 None:intergenic 20.0%
!! GAATGGAAAATTAGATAATA+TGG + chr5_3:9734550-9734569 None:intergenic 20.0%
!!! TAATTTTCATGACTCTATAA+TGG + chr5_3:9735288-9735307 None:intergenic 20.0%
!!! GATATTTTATGAATATCATG+TGG - chr5_3:9735414-9735433 Msa0797550:intron 20.0%
!! CCTATATGTAAAATAAATAG+AGG + chr5_3:9735606-9735625 None:intergenic 20.0%
!!! CCTCTATTTATTTTACATAT+AGG - chr5_3:9735603-9735622 Msa0797550:intron 20.0%
!!! AATATAAGACTTTTTTTGAG+AGG + chr5_3:9735822-9735841 None:intergenic 20.0%
!! TAAATACAAGACTTTTTGTG+GGG + chr5_3:9734486-9734505 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG - chr5_3:9734589-9734608 Msa0797550:three_prime_UTR 25.0%
! TCTCTCAAGTATCAAAATAT+GGG - chr5_3:9734590-9734609 Msa0797550:three_prime_UTR 25.0%
! TTAATTCATCTTTCTCAAGT+GGG - chr5_3:9734849-9734868 Msa0797550:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG + chr5_3:9735052-9735071 None:intergenic 25.0%
! TGAAAGAGAGAGAAAAAATT+AGG - chr5_3:9735663-9735682 Msa0797550:intron 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG - chr5_3:9735831-9735850 Msa0797550:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG - chr5_3:9735832-9735851 Msa0797550:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG - chr5_3:9736042-9736061 Msa0797550:intron 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG + chr5_3:9736270-9736289 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG + chr5_3:9736319-9736338 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG - chr5_3:9736324-9736343 Msa0797550:CDS 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG - chr5_3:9736540-9736559 Msa0797550:five_prime_UTR 25.0%
!! TAAATACAAGACTTTTTGTG+GGG + chr5_3:9734486-9734505 None:intergenic 25.0%
! TTCTCTCAAGTATCAAAATA+TGG - chr5_3:9734589-9734608 Msa0797550:three_prime_UTR 25.0%
! TCTCTCAAGTATCAAAATAT+GGG - chr5_3:9734590-9734609 Msa0797550:three_prime_UTR 25.0%
! TTAATTCATCTTTCTCAAGT+GGG - chr5_3:9734849-9734868 Msa0797550:CDS 25.0%
! GAGATGAGAAAAATAATTAC+AGG + chr5_3:9735052-9735071 None:intergenic 25.0%
! TGAAAGAGAGAGAAAAAATT+AGG - chr5_3:9735663-9735682 Msa0797550:intron 25.0%
!! AGTCTTATATTAAAGTAAGG+AGG - chr5_3:9735831-9735850 Msa0797550:intron 25.0%
! GTCTTATATTAAAGTAAGGA+GGG - chr5_3:9735832-9735851 Msa0797550:intron 25.0%
! AAACATTAACAGACGAAAAT+AGG - chr5_3:9736042-9736061 Msa0797550:intron 25.0%
!!! TTTTTTTGTTTAACATGCTG+CGG + chr5_3:9736270-9736289 None:intergenic 25.0%
! CAAAAAAATACAATGGTTGT+GGG + chr5_3:9736319-9736338 None:intergenic 25.0%
!!! CATTGTATTTTTTTGGTTGA+GGG - chr5_3:9736324-9736343 Msa0797550:CDS 25.0%
!!! TTTTTTTTTTGAGACTTGAG+AGG - chr5_3:9736540-9736559 Msa0797550:five_prime_UTR 25.0%
! AAATACAAGACTTTTTGTGG+GGG + chr5_3:9734485-9734504 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG + chr5_3:9734519-9734538 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG + chr5_3:9734520-9734539 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG + chr5_3:9734643-9734662 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG + chr5_3:9734839-9734858 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG - chr5_3:9734848-9734867 Msa0797550:CDS 30.0%
CAAATGCTAGAAAGAAACTA+AGG - chr5_3:9734966-9734985 Msa0797550:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG + chr5_3:9734996-9735015 None:intergenic 30.0%
! CTGTCTAGCTACTAAATTTT+TGG + chr5_3:9735363-9735382 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG - chr5_3:9735915-9735934 Msa0797550:CDS 30.0%
AATAAATGTTGGTGCATGTT+TGG - chr5_3:9735926-9735945 Msa0797550:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG + chr5_3:9736233-9736252 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG + chr5_3:9736320-9736339 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG - chr5_3:9736317-9736336 Msa0797550:CDS 30.0%
CCTCAACCAAAAAAATACAA+TGG + chr5_3:9736326-9736345 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG - chr5_3:9736323-9736342 Msa0797550:CDS 30.0%
! TATATACGTTTTGCTAAGCT+AGG - chr5_3:9736350-9736369 Msa0797550:CDS 30.0%
! ATATACGTTTTGCTAAGCTA+GGG - chr5_3:9736351-9736370 Msa0797550:CDS 30.0%
TAGTTTAGCTAATACTGTAG+AGG - chr5_3:9736390-9736409 Msa0797550:CDS 30.0%
! AAATACAAGACTTTTTGTGG+GGG + chr5_3:9734485-9734504 None:intergenic 30.0%
ATAAAGGGTTAGAAGAGAAA+GGG + chr5_3:9734519-9734538 None:intergenic 30.0%
TATAAAGGGTTAGAAGAGAA+AGG + chr5_3:9734520-9734539 None:intergenic 30.0%
TCAAAGATAAACCTAGAACA+AGG + chr5_3:9734643-9734662 None:intergenic 30.0%
GATGAATTAACAACACTATG+AGG + chr5_3:9734839-9734858 None:intergenic 30.0%
GTTAATTCATCTTTCTCAAG+TGG - chr5_3:9734848-9734867 Msa0797550:CDS 30.0%
CAAATGCTAGAAAGAAACTA+AGG - chr5_3:9734966-9734985 Msa0797550:CDS 30.0%
AAGCAATAGTGATTGTTCTT+TGG + chr5_3:9734996-9735015 None:intergenic 30.0%
! CTGTCTAGCTACTAAATTTT+TGG + chr5_3:9735363-9735382 None:intergenic 30.0%
CAGACTAAGCTAATAAATGT+TGG - chr5_3:9735915-9735934 Msa0797550:CDS 30.0%
AATAAATGTTGGTGCATGTT+TGG - chr5_3:9735926-9735945 Msa0797550:intron 30.0%
GGATTGTAGAAATGAGTATT+TGG + chr5_3:9736233-9736252 None:intergenic 30.0%
CCAAAAAAATACAATGGTTG+TGG + chr5_3:9736320-9736339 None:intergenic 30.0%
!!! CCACAACCATTGTATTTTTT+TGG - chr5_3:9736317-9736336 Msa0797550:CDS 30.0%
CCTCAACCAAAAAAATACAA+TGG + chr5_3:9736326-9736345 None:intergenic 30.0%
!!! CCATTGTATTTTTTTGGTTG+AGG - chr5_3:9736323-9736342 Msa0797550:CDS 30.0%
! TATATACGTTTTGCTAAGCT+AGG - chr5_3:9736350-9736369 Msa0797550:CDS 30.0%
! ATATACGTTTTGCTAAGCTA+GGG - chr5_3:9736351-9736370 Msa0797550:CDS 30.0%
TAGTTTAGCTAATACTGTAG+AGG - chr5_3:9736390-9736409 Msa0797550:CDS 30.0%
GATACTTGAGAGAAGAATGA+AGG + chr5_3:9734583-9734602 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG - chr5_3:9734661-9734680 Msa0797550:three_prime_UTR 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG + chr5_3:9734775-9734794 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG - chr5_3:9734906-9734925 Msa0797550:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG - chr5_3:9734907-9734926 Msa0797550:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG - chr5_3:9735216-9735235 Msa0797550:intron 35.0%
AAAAAGTTTATGTCCGTACC+TGG + chr5_3:9735246-9735265 None:intergenic 35.0%
! GACTCTATAATGGTGATGTA+CGG + chr5_3:9735278-9735297 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG - chr5_3:9735865-9735884 Msa0797550:CDS 35.0%
ACAAATCCAAAAGCAAAGGA+AGG + chr5_3:9735874-9735893 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG - chr5_3:9735873-9735892 Msa0797550:CDS 35.0%
AACCACAAATCCAAAAGCAA+AGG + chr5_3:9735878-9735897 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG - chr5_3:9735886-9735905 Msa0797550:CDS 35.0%
AACAAAGCTGAAACAAACAG+AGG - chr5_3:9735989-9736008 Msa0797550:intron 35.0%
CATTAACAGACGAAAATAGG+AGG - chr5_3:9736045-9736064 Msa0797550:intron 35.0%
GTCTTTAGATTCTTAGAACG+AGG + chr5_3:9736501-9736520 None:intergenic 35.0%
GATACTTGAGAGAAGAATGA+AGG + chr5_3:9734583-9734602 None:intergenic 35.0%
GAATACTTCTACTACTCCAA+AGG - chr5_3:9734661-9734680 Msa0797550:three_prime_UTR 35.0%
! GAGCTTGTTTGTGATTTGTA+CGG + chr5_3:9734775-9734794 None:intergenic 35.0%
AAGAAGAAGTAGAAGAAGAG+AGG - chr5_3:9734906-9734925 Msa0797550:CDS 35.0%
AGAAGAAGTAGAAGAAGAGA+GGG - chr5_3:9734907-9734926 Msa0797550:CDS 35.0%
TTGAAGTATGGTTCCAGAAT+CGG - chr5_3:9735216-9735235 Msa0797550:intron 35.0%
AAAAAGTTTATGTCCGTACC+TGG + chr5_3:9735246-9735265 None:intergenic 35.0%
! GACTCTATAATGGTGATGTA+CGG + chr5_3:9735278-9735297 None:intergenic 35.0%
! AAAAAGCCTTCCTTTGCTTT+TGG - chr5_3:9735865-9735884 Msa0797550:CDS 35.0%
ACAAATCCAAAAGCAAAGGA+AGG + chr5_3:9735874-9735893 None:intergenic 35.0%
!! TTCCTTTGCTTTTGGATTTG+TGG - chr5_3:9735873-9735892 Msa0797550:CDS 35.0%
AACCACAAATCCAAAAGCAA+AGG + chr5_3:9735878-9735897 None:intergenic 35.0%
GGATTTGTGGTTGTTAAGTA+TGG - chr5_3:9735886-9735905 Msa0797550:CDS 35.0%
AACAAAGCTGAAACAAACAG+AGG - chr5_3:9735989-9736008 Msa0797550:intron 35.0%
CATTAACAGACGAAAATAGG+AGG - chr5_3:9736045-9736064 Msa0797550:intron 35.0%
GTCTTTAGATTCTTAGAACG+AGG + chr5_3:9736501-9736520 None:intergenic 35.0%
ACTTGAGAGAAGAATGAAGG+AGG + chr5_3:9734580-9734599 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG - chr5_3:9734629-9734648 Msa0797550:three_prime_UTR 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG + chr5_3:9734680-9734699 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG - chr5_3:9734779-9734798 Msa0797550:three_prime_UTR 40.0%
AAACAAGCTCCCAAAGGTTA+TGG - chr5_3:9734785-9734804 Msa0797550:three_prime_UTR 40.0%
AGTTCCTCACCATAACCTTT+GGG + chr5_3:9734797-9734816 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG + chr5_3:9734798-9734817 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG - chr5_3:9735183-9735202 Msa0797550:intron 40.0%
AACCATACTTCAACTTGTCG+CGG + chr5_3:9735209-9735228 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG - chr5_3:9735992-9736011 Msa0797550:intron 40.0%
CGAAAATAGGAGGCTCAAAA+AGG - chr5_3:9736055-9736074 Msa0797550:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG - chr5_3:9736205-9736224 Msa0797550:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG + chr5_3:9736225-9736244 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG + chr5_3:9736266-9736285 None:intergenic 40.0%
ACTTGAGAGAAGAATGAAGG+AGG + chr5_3:9734580-9734599 None:intergenic 40.0%
GATTCTCTTCACCTTGTTCT+AGG - chr5_3:9734629-9734648 Msa0797550:three_prime_UTR 40.0%
! GTGGTGGTAGTTATTTCCTT+TGG + chr5_3:9734680-9734699 None:intergenic 40.0%
AATCACAAACAAGCTCCCAA+AGG - chr5_3:9734779-9734798 Msa0797550:three_prime_UTR 40.0%
AAACAAGCTCCCAAAGGTTA+TGG - chr5_3:9734785-9734804 Msa0797550:three_prime_UTR 40.0%
AGTTCCTCACCATAACCTTT+GGG + chr5_3:9734797-9734816 None:intergenic 40.0%
AAGTTCCTCACCATAACCTT+TGG + chr5_3:9734798-9734817 None:intergenic 40.0%
TAGCGAGACAGTTGAATCTA+AGG - chr5_3:9735183-9735202 Msa0797550:intron 40.0%
AACCATACTTCAACTTGTCG+CGG + chr5_3:9735209-9735228 None:intergenic 40.0%
AAAGCTGAAACAAACAGAGG+TGG - chr5_3:9735992-9736011 Msa0797550:intron 40.0%
CGAAAATAGGAGGCTCAAAA+AGG - chr5_3:9736055-9736074 Msa0797550:CDS 40.0%
TAAAATCACTGCCTTCACCA+TGG - chr5_3:9736205-9736224 Msa0797550:CDS 40.0%
! GAAATGAGTATTTGGAGCCA+TGG + chr5_3:9736225-9736244 None:intergenic 40.0%
TTTGTTTAACATGCTGCGGA+AGG + chr5_3:9736266-9736285 None:intergenic 40.0%
AAGGGTTAGAAGAGAAAGGG+AGG + chr5_3:9734516-9734535 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG + chr5_3:9734567-9734586 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG + chr5_3:9734577-9734596 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG + chr5_3:9734729-9734748 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG - chr5_3:9734728-9734747 Msa0797550:three_prime_UTR 45.0%
GAGAGTCCTAACGTTAAGGA+TGG + chr5_3:9734737-9734756 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG - chr5_3:9734737-9734756 Msa0797550:three_prime_UTR 45.0%
ACCAGAGAGTCCTAACGTTA+AGG + chr5_3:9734741-9734760 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG + chr5_3:9736219-9736238 None:intergenic 45.0%
AAGGGTTAGAAGAGAAAGGG+AGG + chr5_3:9734516-9734535 None:intergenic 45.0%
ATGAAGGAGGTGGAGATGAA+TGG + chr5_3:9734567-9734586 None:intergenic 45.0%
TGAGAGAAGAATGAAGGAGG+TGG + chr5_3:9734577-9734596 None:intergenic 45.0%
TAACGTTAAGGATGGCTCGT+TGG + chr5_3:9734729-9734748 None:intergenic 45.0%
AACGAGCCATCCTTAACGTT+AGG - chr5_3:9734728-9734747 Msa0797550:three_prime_UTR 45.0%
GAGAGTCCTAACGTTAAGGA+TGG + chr5_3:9734737-9734756 None:intergenic 45.0%
TCCTTAACGTTAGGACTCTC+TGG - chr5_3:9734737-9734756 Msa0797550:three_prime_UTR 45.0%
ACCAGAGAGTCCTAACGTTA+AGG + chr5_3:9734741-9734760 None:intergenic 45.0%
! AGTATTTGGAGCCATGGTGA+AGG + chr5_3:9736219-9736238 None:intergenic 45.0%
!!! AACTTATATTAAATAAATTT+TGG - chr5_3:9735952-9735971 Msa0797550:intron 5.0%
!!! AACTTATATTAAATAAATTT+TGG - chr5_3:9735952-9735971 Msa0797550:intron 5.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG + chr5_3:9734478-9734497 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG + chr5_3:9734479-9734498 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG + chr5_3:9734513-9734532 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG + chr5_3:9734699-9734718 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG + chr5_3:9734702-9734721 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG + chr5_3:9734705-9734724 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG + chr5_3:9734708-9734727 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG - chr5_3:9734790-9734809 Msa0797550:three_prime_UTR 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG - chr5_3:9734871-9734890 Msa0797550:CDS 50.0%
GCAGGCATAGGCATGTACAA+AGG + chr5_3:9736116-9736135 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG + chr5_3:9736150-9736169 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG - chr5_3:9736152-9736171 Msa0797550:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG + chr5_3:9736186-9736205 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG + chr5_3:9736254-9736273 None:intergenic 50.0%
!!! AGACTTTTTGTGGGGGCGTT+GGG + chr5_3:9734478-9734497 None:intergenic 50.0%
!! AAGACTTTTTGTGGGGGCGT+TGG + chr5_3:9734479-9734498 None:intergenic 50.0%
GGTTAGAAGAGAAAGGGAGG+TGG + chr5_3:9734513-9734532 None:intergenic 50.0%
!! ATAGGGATTCATGGTGGTGG+TGG + chr5_3:9734699-9734718 None:intergenic 50.0%
GGAATAGGGATTCATGGTGG+TGG + chr5_3:9734702-9734721 None:intergenic 50.0%
GGTGGAATAGGGATTCATGG+TGG + chr5_3:9734705-9734724 None:intergenic 50.0%
GGAGGTGGAATAGGGATTCA+TGG + chr5_3:9734708-9734727 None:intergenic 50.0%
AGCTCCCAAAGGTTATGGTG+AGG - chr5_3:9734790-9734809 Msa0797550:three_prime_UTR 50.0%
!! GAGAGTGCTGCAAGTGAAGA+GGG - chr5_3:9734871-9734890 Msa0797550:CDS 50.0%
GCAGGCATAGGCATGTACAA+AGG + chr5_3:9736116-9736135 None:intergenic 50.0%
TCTTTCGCAAGAAGGGCAGA+TGG + chr5_3:9736150-9736169 None:intergenic 50.0%
TGCCCTTCTTGCGAAAGACT+CGG - chr5_3:9736152-9736171 Msa0797550:CDS 50.0%
ATTAGAACCACCACCACCGT+CGG + chr5_3:9736186-9736205 None:intergenic 50.0%
GCTGCGGAAGGATTGTTGAA+AGG + chr5_3:9736254-9736273 None:intergenic 50.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG + chr5_3:9734474-9734493 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG + chr5_3:9734716-9734735 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG + chr5_3:9734717-9734736 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG + chr5_3:9734723-9734742 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG + chr5_3:9734726-9734745 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG - chr5_3:9734870-9734889 Msa0797550:CDS 55.0%
! GGCCGCGACAAGTTGAAGTA+TGG - chr5_3:9735204-9735223 Msa0797550:intron 55.0%
CAGAATCGGAGAGCCAGGTA+CGG - chr5_3:9735230-9735249 Msa0797550:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG + chr5_3:9736144-9736163 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG + chr5_3:9736157-9736176 None:intergenic 55.0%
!!! TTTTTGTGGGGGCGTTGGGT+GGG + chr5_3:9734474-9734493 None:intergenic 55.0%
GGCTCGTTGGAGGTGGAATA+GGG + chr5_3:9734716-9734735 None:intergenic 55.0%
TGGCTCGTTGGAGGTGGAAT+AGG + chr5_3:9734717-9734736 None:intergenic 55.0%
TAAGGATGGCTCGTTGGAGG+TGG + chr5_3:9734723-9734742 None:intergenic 55.0%
CGTTAAGGATGGCTCGTTGG+AGG + chr5_3:9734726-9734745 None:intergenic 55.0%
!! GGAGAGTGCTGCAAGTGAAG+AGG - chr5_3:9734870-9734889 Msa0797550:CDS 55.0%
! GGCCGCGACAAGTTGAAGTA+TGG - chr5_3:9735204-9735223 Msa0797550:intron 55.0%
CAGAATCGGAGAGCCAGGTA+CGG - chr5_3:9735230-9735249 Msa0797550:intron 55.0%
GCAAGAAGGGCAGATGGAGA+GGG + chr5_3:9736144-9736163 None:intergenic 55.0%
GGCCGAGTCTTTCGCAAGAA+GGG + chr5_3:9736157-9736176 None:intergenic 55.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG + chr5_3:9734475-9734494 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG + chr5_3:9734696-9734715 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG - chr5_3:9735225-9735244 Msa0797550:intron 60.0%
! CGTACCTGGCTCTCCGATTC+TGG + chr5_3:9735232-9735251 None:intergenic 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG + chr5_3:9736128-9736147 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG + chr5_3:9736134-9736153 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG + chr5_3:9736145-9736164 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG + chr5_3:9736158-9736177 None:intergenic 60.0%
!!! CTTTTTGTGGGGGCGTTGGG+TGG + chr5_3:9734475-9734494 None:intergenic 60.0%
!! GGGATTCATGGTGGTGGTGG+TGG + chr5_3:9734696-9734715 None:intergenic 60.0%
GGTTCCAGAATCGGAGAGCC+AGG - chr5_3:9735225-9735244 Msa0797550:intron 60.0%
! CGTACCTGGCTCTCCGATTC+TGG + chr5_3:9735232-9735251 None:intergenic 60.0%
GAGAGGGTAGCTGCAGGCAT+AGG + chr5_3:9736128-9736147 None:intergenic 60.0%
CAGATGGAGAGGGTAGCTGC+AGG + chr5_3:9736134-9736153 None:intergenic 60.0%
CGCAAGAAGGGCAGATGGAG+AGG + chr5_3:9736145-9736164 None:intergenic 60.0%
CGGCCGAGTCTTTCGCAAGA+AGG + chr5_3:9736158-9736177 None:intergenic 60.0%
CGTTGGGTGGGTGGGTGAGT+GGG + chr5_3:9734462-9734481 None:intergenic 65.0%
CGTTGGGTGGGTGGGTGAGT+GGG + chr5_3:9734462-9734481 None:intergenic 65.0%
GGGTGGGTGGGTGAGTGGGT+GGG + chr5_3:9734458-9734477 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG + chr5_3:9734459-9734478 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG + chr5_3:9734463-9734482 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG + chr5_3:9734470-9734489 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG + chr5_3:9734471-9734490 None:intergenic 70.0%
GGGTGGGTGGGTGAGTGGGT+GGG + chr5_3:9734458-9734477 None:intergenic 70.0%
TGGGTGGGTGGGTGAGTGGG+TGG + chr5_3:9734459-9734478 None:intergenic 70.0%
GCGTTGGGTGGGTGGGTGAG+TGG + chr5_3:9734463-9734482 None:intergenic 70.0%
!! TGTGGGGGCGTTGGGTGGGT+GGG + chr5_3:9734470-9734489 None:intergenic 70.0%
!! TTGTGGGGGCGTTGGGTGGG+TGG + chr5_3:9734471-9734490 None:intergenic 70.0%
AGACTCGGCCGCGTCGCCGA+CGG - chr5_3:9736167-9736186 Msa0797550:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG + chr5_3:9736178-9736197 None:intergenic 75.0%
AGACTCGGCCGCGTCGCCGA+CGG - chr5_3:9736167-9736186 Msa0797550:CDS 75.0%
CACCACCACCGTCGGCGACG+CGG + chr5_3:9736178-9736197 None:intergenic 75.0%
!! CGCGTCGCCGACGGTGGTGG+TGG - chr5_3:9736176-9736195 Msa0797550:CDS 80.0%
!! CGCGTCGCCGACGGTGGTGG+TGG - chr5_3:9736176-9736195 Msa0797550:CDS 80.0%
! CTCGGCCGCGTCGCCGACGG+TGG - chr5_3:9736170-9736189 Msa0797550:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG - chr5_3:9736173-9736192 Msa0797550:CDS 85.0%
! CTCGGCCGCGTCGCCGACGG+TGG - chr5_3:9736170-9736189 Msa0797550:CDS 85.0%
! GGCCGCGTCGCCGACGGTGG+TGG - chr5_3:9736173-9736192 Msa0797550:CDS 85.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9734455 9736648 9734455 ID=Msa0797550;Name=Msa0797550
chr5_3 mRNA 9734455 9736648 9734455 ID=Msa0797550-mRNA-1;Parent=Msa0797550;Name=Msa0797550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=153|1|1|1|1|1|3|368|271
chr5_3 exon 9734455 9735114 9734455 ID=Msa0797550-mRNA-1:exon:4181;Parent=Msa0797550-mRNA-1
chr5_3 exon 9735857 9735936 9735857 ID=Msa0797550-mRNA-1:exon:4180;Parent=Msa0797550-mRNA-1
chr5_3 exon 9736052 9736648 9736052 ID=Msa0797550-mRNA-1:exon:4179;Parent=Msa0797550-mRNA-1
chr5_3 five_prime_UTR 9736496 9736648 9736496 ID=Msa0797550-mRNA-1:five_prime_utr;Parent=Msa0797550-mRNA-1
chr5_3 CDS 9736052 9736495 9736052 ID=Msa0797550-mRNA-1:cds;Parent=Msa0797550-mRNA-1
chr5_3 CDS 9735857 9735936 9735857 ID=Msa0797550-mRNA-1:cds;Parent=Msa0797550-mRNA-1
chr5_3 CDS 9734823 9735114 9734823 ID=Msa0797550-mRNA-1:cds;Parent=Msa0797550-mRNA-1
chr5_3 three_prime_UTR 9734455 9734822 9734455 ID=Msa0797550-mRNA-1:three_prime_utr;Parent=Msa0797550-mRNA-1
Gene Sequence

>Msa0797550

ATGGGTCTTAATAATGATCAAGATTCTCTTCACCTTGTTCTAGGTTTATCTTTGAATACTTCTACTACTCCAAAGGAAATAACTACCACCACCACCACCATGAATCCCTATTCCACCTCCAACGAGCCATCCTTAACGTTAGGACTCTCTGGTGAGAGTTATAACCGTACAAATCACAAACAAGCTCCCAAAGGTTATGGTGAGGAACTTTGTAGACAAACTTCATCACCTCATAGTGTTGTTAATTCATCTTTCTCAAGTGGGAGAGTGCTGCAAGTGAAGAGGGAGAGAGATGAAGAAGAAGAAGTAGAAGAAGAGAGGGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGCTACAAATGCTAGAAAGAAACTAAGGCTTACCAAAGAACAATCACTATTGCTTGAAGAAAGCTTCAAACTACATAGCACTCTCAATCCTAAACAAAAACAAGCTTTAGCGAGACAGTTGAATCTAAGGCCGCGACAAGTTGAAGTATGGTTCCAGAATCGGAGAGCCAGAACAAAGCTGAAACAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGTTGTGAAACATTAACAGACGAAAATAGGAGGCTCAAAAAGGAGTTGCAAGAGTTGAAATCATTGAAAGTAGCACAACCTTTGTACATGCCTATGCCTGCAGCTACCCTCTCCATCTGCCCTTCTTGCGAAAGACTCGGCCGCGTCGCCGACGGTGGTGGTGGTTCTAATAAAATCACTGCCTTCACCATGGCTCCAAATACTCATTTCTACAATCCTTTCAACAATCCTTCCGCAGCATGTTAA
Protein sequence

>Msa0797550

MGLNNDQDSLHLVLGLSLNTSTTPKEITTTTTTMNPYSTSNEPSLTLGLSGESYNRTNHKQAPKGYGEELCRQTSSPHSVVNSSFSSGRVLQVKRERDEEEEVEEERVSSRVSDEDEDATNARKKLRLTKEQSLLLEESFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKSLKVAQPLYMPMPAATLSICPSCERLGRVADGGGGSNKITAFTMAPNTHFYNPFNNPSAAC*