Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756200 | sp|O64815|HLS1L_ARATH | 68.599 | 414 | 112 | 4 | 6 | 403 | 2 | 413 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756200 | G7K3U7 | 96.526 | 403 | 14 | 0 | 1 | 403 | 1 | 403 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0756200 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0713980 | Msa0756200 | 0.835412 | 1.703651e-56 | -8.615850e-47 |
| Msa0756200 | Msa0756230 | 0.930201 | 2.312321e-93 | -8.615850e-47 |
| Msa0756200 | Msa0835390 | 0.909390 | 6.005608e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756200 | MtrunA17_Chr5g0401351 | 96.526 | 403 | 14 | 0 | 1 | 403 | 1 | 403 | 0.0 | 807 |
| Msa0756200 | MtrunA17_Chr4g0053961 | 71.394 | 409 | 107 | 4 | 5 | 403 | 3 | 411 | 0.0 | 609 |
| Msa0756200 | MtrunA17_Chr4g0001411 | 47.816 | 412 | 186 | 8 | 2 | 403 | 17 | 409 | 9.79e-127 | 371 |
| Msa0756200 | MtrunA17_Chr3g0105631 | 47.619 | 399 | 185 | 7 | 11 | 403 | 8 | 388 | 1.83e-119 | 352 |
| Msa0756200 | MtrunA17_Chr4g0068331 | 34.550 | 411 | 237 | 12 | 9 | 402 | 11 | 406 | 3.76e-60 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756200 | AT2G23060.1 | 68.599 | 414 | 112 | 4 | 6 | 403 | 2 | 413 | 0.0 | 571 |
| Msa0756200 | AT4G37580.1 | 67.581 | 401 | 123 | 3 | 10 | 403 | 3 | 403 | 0.0 | 547 |
| Msa0756200 | AT5G67430.1 | 60.506 | 395 | 140 | 6 | 9 | 403 | 8 | 386 | 1.48e-168 | 477 |
| Msa0756200 | AT4G37580.2 | 68.328 | 341 | 104 | 2 | 67 | 403 | 6 | 346 | 7.60e-167 | 471 |
| Msa0756200 | AT2G23060.2 | 70.609 | 279 | 79 | 1 | 128 | 403 | 1 | 279 | 5.02e-145 | 413 |
| Msa0756200 | AT5G67430.2 | 61.747 | 332 | 116 | 5 | 72 | 403 | 1 | 321 | 4.24e-143 | 410 |
| Msa0756200 | AT2G30090.1 | 41.791 | 402 | 195 | 7 | 11 | 403 | 15 | 386 | 1.89e-95 | 291 |
Find 99 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAAAACGACACGTATTT+TGG | 0.139903 | 5_2:+10269579 | Msa0756200:CDS |
| TTAACCATCTTCACCTTCTT+TGG | 0.150962 | 5_2:-10269694 | None:intergenic |
| TATCTTGTGCTAATGATTTA+TGG | 0.162688 | 5_2:+10269830 | Msa0756200:CDS |
| CCGGATTTGTTTAGGCCTTT+TGG | 0.177590 | 5_2:+10269637 | Msa0756200:CDS |
| TGGCCCAGATAGGTTTCTTT+TGG | 0.229875 | 5_2:+10269462 | Msa0756200:CDS |
| TTGTGGGTTTGCGCATAATT+TGG | 0.260941 | 5_2:+10269723 | Msa0756200:CDS |
| TGCTTGGTGACCCCATTTGC+AGG | 0.320702 | 5_2:+10268578 | Msa0756200:CDS |
| TAACCATCTTCACCTTCTTT+GGG | 0.322009 | 5_2:-10269693 | None:intergenic |
| GCCTAAAATGTAAGCGAGTT+TGG | 0.325207 | 5_2:-10268913 | None:intergenic |
| AGAACAGCGTCAATGTCATT+AGG | 0.331188 | 5_2:-10269370 | None:intergenic |
| CTTAATAACAAACTTAATCT+AGG | 0.336122 | 5_2:+10269391 | Msa0756200:CDS |
| TAAGCGAGTTTGGTGTAAAC+TGG | 0.336993 | 5_2:-10268903 | None:intergenic |
| GGAATGTGGGTGTGGGGTTG+TGG | 0.340015 | 5_2:+10269750 | Msa0756200:CDS |
| TTTGGACCCACCTTGTTCTT+GGG | 0.345593 | 5_2:+10269480 | Msa0756200:CDS |
| TGGCTATGGAATGTGGGTGT+GGG | 0.346396 | 5_2:+10269743 | Msa0756200:CDS |
| TTGGCTATGGAATGTGGGTG+TGG | 0.357803 | 5_2:+10269742 | Msa0756200:CDS |
| CGTCGGTTCCGGATTTGTTT+AGG | 0.361537 | 5_2:+10269629 | Msa0756200:CDS |
| CGGCGCTGAATATTCATATA+TGG | 0.362736 | 5_2:+10269147 | Msa0756200:CDS |
| TTGGTAGCGTACCGTTGATT+AGG | 0.367983 | 5_2:-10268948 | None:intergenic |
| GGGTCCAAAAGAAACCTATC+TGG | 0.369698 | 5_2:-10269466 | None:intergenic |
| GTTGAAGGTACCGTCGGTTC+CGG | 0.377354 | 5_2:+10269618 | Msa0756200:CDS |
| ATGATTTATGGTGTATTAAG+AGG | 0.386924 | 5_2:+10269842 | Msa0756200:CDS |
| TTTGTTCTGTGAGCATAAAC+GGG | 0.400112 | 5_2:-10269259 | None:intergenic |
| CCGGGCTTTGCCGTGGTTGA+AGG | 0.401375 | 5_2:+10269603 | Msa0756200:CDS |
| TGAGGTTTGGTATACCTCAT+TGG | 0.402328 | 5_2:+10269800 | Msa0756200:CDS |
| TGGTGCAGGAGAATGGGAAT+AGG | 0.414994 | 5_2:+10269082 | Msa0756200:intron |
| GAACAGCGTCAATGTCATTA+GGG | 0.415763 | 5_2:-10269369 | None:intergenic |
| TGAGTGGCGGACCCTGCAAA+TGG | 0.420570 | 5_2:-10268590 | None:intergenic |
| GGCGCGTCGCGTGTCAAGCG+CGG | 0.428563 | 5_2:+10269553 | Msa0756200:CDS |
| AAGATGGTTAAGGCCCTTTG+TGG | 0.430907 | 5_2:+10269706 | Msa0756200:CDS |
| GCGCGTCGCGTGTCAAGCGC+GGG | 0.431919 | 5_2:+10269554 | Msa0756200:CDS |
| GAGTGGCGGACCCTGCAAAT+GGG | 0.439578 | 5_2:-10268589 | None:intergenic |
| CTCACCTTCTTTCCTCATGC+TGG | 0.441437 | 5_2:+10268609 | Msa0756200:CDS |
| GTGATGGTTCTGTTGGTGAT+TGG | 0.447246 | 5_2:+10269881 | Msa0756200:CDS |
| GGCTATGGAATGTGGGTGTG+GGG | 0.449265 | 5_2:+10269744 | Msa0756200:CDS |
| GAAATAGTTGGAATGATAAG+AGG | 0.455218 | 5_2:+10268813 | Msa0756200:CDS |
| GGTGCAGGAGAATGGGAATA+GGG | 0.455976 | 5_2:+10269083 | Msa0756200:intron |
| GAAATTGATAAAGAAATAGT+TGG | 0.468243 | 5_2:+10268801 | Msa0756200:CDS |
| TGACGAGAATTGACGGTGTA+CGG | 0.468550 | 5_2:-10269234 | None:intergenic |
| TCATGTGAACCATTGAGGTT+TGG | 0.476876 | 5_2:+10269787 | Msa0756200:CDS |
| TCTCTCTTCACCGACATGCT+TGG | 0.485318 | 5_2:+10268562 | Msa0756200:CDS |
| TACAGTGTCAAAACATGGCC+TGG | 0.491753 | 5_2:+10269442 | Msa0756200:CDS |
| AGATGGTTAAGGCCCTTTGT+GGG | 0.493646 | 5_2:+10269707 | Msa0756200:CDS |
| CATAATTTGGCTATGGAATG+TGG | 0.501628 | 5_2:+10269736 | Msa0756200:CDS |
| AAGTGTTTGGAATTCTAAAG+AGG | 0.505817 | 5_2:+10269510 | Msa0756200:CDS |
| CTTGTTGATGATTATAGTGA+TGG | 0.506465 | 5_2:+10269865 | Msa0756200:CDS |
| GATTGGACCAAGTCTATGCC+AGG | 0.509333 | 5_2:+10269898 | Msa0756200:CDS |
| CCAAAAGGCCTAAACAAATC+CGG | 0.512387 | 5_2:-10269637 | None:intergenic |
| AAAGAAGGTGAAGATGGTTA+AGG | 0.518056 | 5_2:+10269696 | Msa0756200:CDS |
| CCTTCAACCACGGCAAAGCC+CGG | 0.518891 | 5_2:-10269603 | None:intergenic |
| ACAACTTCTTAAATCTCTCT+AGG | 0.519282 | 5_2:-10269940 | None:intergenic |
| TTGCTTCATGTGAACCATTG+AGG | 0.519399 | 5_2:+10269782 | Msa0756200:CDS |
| GATTATAGTGATGGTTCTGT+TGG | 0.524315 | 5_2:+10269874 | Msa0756200:CDS |
| ACGGCGTCAGAAGGAGTTAA+CGG | 0.524819 | 5_2:-10269307 | None:intergenic |
| TATACCAGCATGAGGAAAGA+AGG | 0.530072 | 5_2:-10268613 | None:intergenic |
| ACCGACGGTACCTTCAACCA+CGG | 0.534359 | 5_2:-10269613 | None:intergenic |
| AAACATGGCCTGGCCCAGAT+AGG | 0.535009 | 5_2:+10269452 | Msa0756200:CDS |
| TAGAATATAACGGCGTCAGA+AGG | 0.539306 | 5_2:-10269316 | None:intergenic |
| AAAAGAAACCTATCTGGGCC+AGG | 0.540432 | 5_2:-10269460 | None:intergenic |
| GTTTGCGCATAATTTGGCTA+TGG | 0.547310 | 5_2:+10269729 | Msa0756200:CDS |
| GCTTGGTGACCCCATTTGCA+GGG | 0.548286 | 5_2:+10268579 | Msa0756200:CDS |
| GTTGAAAGGACATGTGAAGT+TGG | 0.549405 | 5_2:+10268523 | Msa0756200:CDS |
| AATTATGCGCAAACCCACAA+AGG | 0.552012 | 5_2:-10269720 | None:intergenic |
| AAGAGAGAAAGTTGGTCACT+AGG | 0.553217 | 5_2:-10268547 | None:intergenic |
| AAAGAGTAGAAGCAGTTGAA+AGG | 0.557149 | 5_2:+10268509 | Msa0756200:CDS |
| AGAAGGAGTTAACGGAATGA+TGG | 0.559153 | 5_2:-10269299 | None:intergenic |
| GGAGATCCCTGGCATAGACT+TGG | 0.559706 | 5_2:-10269905 | None:intergenic |
| TGAGGTATACCAAACCTCAA+TGG | 0.563011 | 5_2:-10269796 | None:intergenic |
| ACGGGGTTGACGAGAATTGA+CGG | 0.566648 | 5_2:-10269241 | None:intergenic |
| AAAACTCTACGGTAGAGAAA+CGG | 0.566914 | 5_2:-10269345 | None:intergenic |
| GTGTGGGGTTGTGGCTACTG+AGG | 0.570076 | 5_2:+10269759 | Msa0756200:CDS |
| GCCGTGGTTGAAGGTACCGT+CGG | 0.570164 | 5_2:+10269612 | Msa0756200:CDS |
| ATTATGCGCAAACCCACAAA+GGG | 0.571069 | 5_2:-10269719 | None:intergenic |
| ACTGTAGGACCCACTTGGTA+CGG | 0.571473 | 5_2:-10269425 | None:intergenic |
| TTGACACTGTAGGACCCACT+TGG | 0.573131 | 5_2:-10269430 | None:intergenic |
| AGTGGCGGACCCTGCAAATG+GGG | 0.573181 | 5_2:-10268588 | None:intergenic |
| TGAATATTCATATATGGCAA+CGG | 0.574189 | 5_2:+10269153 | Msa0756200:CDS |
| TTCGTGTTTCTCCTAATCAA+CGG | 0.578954 | 5_2:+10268937 | Msa0756200:CDS |
| GAGGCATGGTTTAAAGATAA+CGG | 0.582283 | 5_2:+10269127 | Msa0756200:CDS |
| CTACGGTAGAGAAACGGTTA+CGG | 0.585607 | 5_2:-10269339 | None:intergenic |
| AGGCCCAAAGAAGGTGAAGA+TGG | 0.590583 | 5_2:+10269690 | Msa0756200:CDS |
| GGTCCAAAAGAAACCTATCT+GGG | 0.592928 | 5_2:-10269465 | None:intergenic |
| TGTCGGTGAAGAGAGAAAGT+TGG | 0.598088 | 5_2:-10268555 | None:intergenic |
| CTCTCGAACAATCACACTAA+CGG | 0.599043 | 5_2:-10268464 | None:intergenic |
| TGTGAATATATACCAGCATG+AGG | 0.601698 | 5_2:-10268621 | None:intergenic |
| ACGGTTACGGTAGAATATAA+CGG | 0.610597 | 5_2:-10269326 | None:intergenic |
| CTTAAAATAGCCCAAGAACA+AGG | 0.618666 | 5_2:-10269490 | None:intergenic |
| ATAATTTGGCTATGGAATGT+GGG | 0.630129 | 5_2:+10269737 | Msa0756200:CDS |
| AAATAGCCCAAGAACAAGGT+GGG | 0.635584 | 5_2:-10269486 | None:intergenic |
| GCATGAGGAAAGAAGGTGAG+TGG | 0.642413 | 5_2:-10268606 | None:intergenic |
| CTAAACAAATCCGGAACCGA+CGG | 0.646252 | 5_2:-10269628 | None:intergenic |
| GGTCCTACAGTGTCAAAACA+TGG | 0.647080 | 5_2:+10269437 | Msa0756200:CDS |
| AATGGGGTCACCAAGCATGT+CGG | 0.667448 | 5_2:-10268572 | None:intergenic |
| AAAATAGCCCAAGAACAAGG+TGG | 0.667856 | 5_2:-10269487 | None:intergenic |
| TGAGGAAAGAAGGTGAGTGG+CGG | 0.676708 | 5_2:-10268603 | None:intergenic |
| ATTGGACCAAGTCTATGCCA+GGG | 0.683595 | 5_2:+10269899 | Msa0756200:CDS |
| TTGTTCTGTGAGCATAAACG+GGG | 0.686756 | 5_2:-10269258 | None:intergenic |
| AAGCGAGTTTGGTGTAAACT+GGG | 0.687492 | 5_2:-10268902 | None:intergenic |
| GTTGATTAGGAGAAACACGA+AGG | 0.743361 | 5_2:-10268935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAACAAAATAACTG+CGG | - | chr5_2:10268735-10268754 | None:intergenic | 15.0% |
| !! | ATTATAAAACAAAATAACTG+CGG | - | chr5_2:10268735-10268754 | None:intergenic | 15.0% |
| !! | GAAATTGATAAAGAAATAGT+TGG | + | chr5_2:10268801-10268820 | Msa0756200:CDS | 20.0% |
| !! | CTTAATAACAAACTTAATCT+AGG | + | chr5_2:10269391-10269410 | Msa0756200:CDS | 20.0% |
| !! | GAAATTGATAAAGAAATAGT+TGG | + | chr5_2:10268801-10268820 | Msa0756200:CDS | 20.0% |
| !! | CTTAATAACAAACTTAATCT+AGG | + | chr5_2:10269391-10269410 | Msa0756200:CDS | 20.0% |
| !! | TTTTCTTAATCTGTGTGAAT+TGG | + | chr5_2:10268708-10268727 | Msa0756200:intron | 25.0% |
| ! | AACATAGAATATCATATCTC+TGG | - | chr5_2:10268761-10268780 | None:intergenic | 25.0% |
| ! | TGCATAAACATTTGATATGT+TGG | - | chr5_2:10268970-10268989 | None:intergenic | 25.0% |
| ! | TGAATATTCATATATGGCAA+CGG | + | chr5_2:10269153-10269172 | Msa0756200:CDS | 25.0% |
| !!! | TTTAACGGATGCTAAATTTT+CGG | - | chr5_2:10269182-10269201 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTGAAGAGTTTAA+CGG | - | chr5_2:10269197-10269216 | None:intergenic | 25.0% |
| ! | TACAAAAAATGAAACCCAAA+AGG | - | chr5_2:10269655-10269674 | None:intergenic | 25.0% |
| !!! | TTTGGGTTTCATTTTTTGTA+TGG | + | chr5_2:10269655-10269674 | Msa0756200:CDS | 25.0% |
| !!! | TTGGGTTTCATTTTTTGTAT+GGG | + | chr5_2:10269656-10269675 | Msa0756200:CDS | 25.0% |
| ! | TATCTTGTGCTAATGATTTA+TGG | + | chr5_2:10269830-10269849 | Msa0756200:CDS | 25.0% |
| ! | ATGATTTATGGTGTATTAAG+AGG | + | chr5_2:10269842-10269861 | Msa0756200:CDS | 25.0% |
| !! | TTTTCTTAATCTGTGTGAAT+TGG | + | chr5_2:10268708-10268727 | Msa0756200:intron | 25.0% |
| ! | AACATAGAATATCATATCTC+TGG | - | chr5_2:10268761-10268780 | None:intergenic | 25.0% |
| ! | TGCATAAACATTTGATATGT+TGG | - | chr5_2:10268970-10268989 | None:intergenic | 25.0% |
| ! | TGAATATTCATATATGGCAA+CGG | + | chr5_2:10269153-10269172 | Msa0756200:CDS | 25.0% |
| !!! | TTTAACGGATGCTAAATTTT+CGG | - | chr5_2:10269182-10269201 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTGAAGAGTTTAA+CGG | - | chr5_2:10269197-10269216 | None:intergenic | 25.0% |
| ! | TACAAAAAATGAAACCCAAA+AGG | - | chr5_2:10269655-10269674 | None:intergenic | 25.0% |
| !!! | TTTGGGTTTCATTTTTTGTA+TGG | + | chr5_2:10269655-10269674 | Msa0756200:CDS | 25.0% |
| !!! | TTGGGTTTCATTTTTTGTAT+GGG | + | chr5_2:10269656-10269675 | Msa0756200:CDS | 25.0% |
| ! | TATCTTGTGCTAATGATTTA+TGG | + | chr5_2:10269830-10269849 | Msa0756200:CDS | 25.0% |
| ! | ATGATTTATGGTGTATTAAG+AGG | + | chr5_2:10269842-10269861 | Msa0756200:CDS | 25.0% |
| GATATGATATTCTATGTTCG+TGG | + | chr5_2:10268763-10268782 | Msa0756200:intron | 30.0% | |
| GAAATAGTTGGAATGATAAG+AGG | + | chr5_2:10268813-10268832 | Msa0756200:CDS | 30.0% | |
| !!! | TCTTGTTGTACTGTTTTTGA+TGG | + | chr5_2:10269062-10269081 | Msa0756200:intron | 30.0% |
| GTTGAAGCTAGTGAAAAAAA+TGG | + | chr5_2:10269105-10269124 | Msa0756200:CDS | 30.0% | |
| AAACTCTTCACTGAAAAATG+CGG | + | chr5_2:10269199-10269218 | Msa0756200:CDS | 30.0% | |
| ! | TTTTGTTCTGTGAGCATAAA+CGG | - | chr5_2:10269263-10269282 | None:intergenic | 30.0% |
| ! | AAGTGTTTGGAATTCTAAAG+AGG | + | chr5_2:10269510-10269529 | Msa0756200:CDS | 30.0% |
| !!! | TTTCATTTTTTGTATGGGCT+TGG | + | chr5_2:10269661-10269680 | Msa0756200:CDS | 30.0% |
| !!! | TTCATTTTTTGTATGGGCTT+GGG | + | chr5_2:10269662-10269681 | Msa0756200:CDS | 30.0% |
| ATAATTTGGCTATGGAATGT+GGG | + | chr5_2:10269737-10269756 | Msa0756200:CDS | 30.0% | |
| ! | CAAGATAACATTTTCCAATG+AGG | - | chr5_2:10269817-10269836 | None:intergenic | 30.0% |
| !! | CTTGTTGATGATTATAGTGA+TGG | + | chr5_2:10269865-10269884 | Msa0756200:CDS | 30.0% |
| GATATGATATTCTATGTTCG+TGG | + | chr5_2:10268763-10268782 | Msa0756200:intron | 30.0% | |
| GAAATAGTTGGAATGATAAG+AGG | + | chr5_2:10268813-10268832 | Msa0756200:CDS | 30.0% | |
| !!! | TCTTGTTGTACTGTTTTTGA+TGG | + | chr5_2:10269062-10269081 | Msa0756200:intron | 30.0% |
| GTTGAAGCTAGTGAAAAAAA+TGG | + | chr5_2:10269105-10269124 | Msa0756200:CDS | 30.0% | |
| AAACTCTTCACTGAAAAATG+CGG | + | chr5_2:10269199-10269218 | Msa0756200:CDS | 30.0% | |
| ! | TTTTGTTCTGTGAGCATAAA+CGG | - | chr5_2:10269263-10269282 | None:intergenic | 30.0% |
| ! | AAGTGTTTGGAATTCTAAAG+AGG | + | chr5_2:10269510-10269529 | Msa0756200:CDS | 30.0% |
| !!! | TTTCATTTTTTGTATGGGCT+TGG | + | chr5_2:10269661-10269680 | Msa0756200:CDS | 30.0% |
| !!! | TTCATTTTTTGTATGGGCTT+GGG | + | chr5_2:10269662-10269681 | Msa0756200:CDS | 30.0% |
| ATAATTTGGCTATGGAATGT+GGG | + | chr5_2:10269737-10269756 | Msa0756200:CDS | 30.0% | |
| ! | CAAGATAACATTTTCCAATG+AGG | - | chr5_2:10269817-10269836 | None:intergenic | 30.0% |
| !! | CTTGTTGATGATTATAGTGA+TGG | + | chr5_2:10269865-10269884 | Msa0756200:CDS | 30.0% |
| AAAGAGTAGAAGCAGTTGAA+AGG | + | chr5_2:10268509-10268528 | Msa0756200:CDS | 35.0% | |
| TGTGAATATATACCAGCATG+AGG | - | chr5_2:10268624-10268643 | None:intergenic | 35.0% | |
| TGCATAAAAACAGTCACATG+CGG | + | chr5_2:10268837-10268856 | Msa0756200:CDS | 35.0% | |
| ! | ACCAAACTCGCTTACATTTT+AGG | + | chr5_2:10268912-10268931 | Msa0756200:CDS | 35.0% |
| TTCGTGTTTCTCCTAATCAA+CGG | + | chr5_2:10268937-10268956 | Msa0756200:CDS | 35.0% | |
| GAAGCTAGTGAAAAAAATGG+AGG | + | chr5_2:10269108-10269127 | Msa0756200:CDS | 35.0% | |
| TAGTGAAAAAAATGGAGGCA+TGG | + | chr5_2:10269113-10269132 | Msa0756200:CDS | 35.0% | |
| GAGGCATGGTTTAAAGATAA+CGG | + | chr5_2:10269127-10269146 | Msa0756200:CDS | 35.0% | |
| TTTGTTCTGTGAGCATAAAC+GGG | - | chr5_2:10269262-10269281 | None:intergenic | 35.0% | |
| ACGGTTACGGTAGAATATAA+CGG | - | chr5_2:10269329-10269348 | None:intergenic | 35.0% | |
| AAAACTCTACGGTAGAGAAA+CGG | - | chr5_2:10269348-10269367 | None:intergenic | 35.0% | |
| GTCATTAGGGAAAAACTCTA+CGG | - | chr5_2:10269359-10269378 | None:intergenic | 35.0% | |
| CTTAAAATAGCCCAAGAACA+AGG | - | chr5_2:10269493-10269512 | None:intergenic | 35.0% | |
| !! | CTTGGGCTATTTTAAGTGTT+TGG | + | chr5_2:10269497-10269516 | Msa0756200:CDS | 35.0% |
| !! | TAAAGAGGTTTTTAAGCTCG+AGG | + | chr5_2:10269525-10269544 | Msa0756200:CDS | 35.0% |
| ! | TGCTAAAACGACACGTATTT+TGG | + | chr5_2:10269579-10269598 | Msa0756200:CDS | 35.0% |
| !!! | TCATTTTTTGTATGGGCTTG+GGG | + | chr5_2:10269663-10269682 | Msa0756200:CDS | 35.0% |
| TAACCATCTTCACCTTCTTT+GGG | - | chr5_2:10269696-10269715 | None:intergenic | 35.0% | |
| TTAACCATCTTCACCTTCTT+TGG | - | chr5_2:10269697-10269716 | None:intergenic | 35.0% | |
| AAAGAAGGTGAAGATGGTTA+AGG | + | chr5_2:10269696-10269715 | Msa0756200:CDS | 35.0% | |
| CATAATTTGGCTATGGAATG+TGG | + | chr5_2:10269736-10269755 | Msa0756200:CDS | 35.0% | |
| ! | GATTATAGTGATGGTTCTGT+TGG | + | chr5_2:10269874-10269893 | Msa0756200:CDS | 35.0% |
| AAAGAGTAGAAGCAGTTGAA+AGG | + | chr5_2:10268509-10268528 | Msa0756200:CDS | 35.0% | |
| TGTGAATATATACCAGCATG+AGG | - | chr5_2:10268624-10268643 | None:intergenic | 35.0% | |
| TGCATAAAAACAGTCACATG+CGG | + | chr5_2:10268837-10268856 | Msa0756200:CDS | 35.0% | |
| ! | ACCAAACTCGCTTACATTTT+AGG | + | chr5_2:10268912-10268931 | Msa0756200:CDS | 35.0% |
| TTCGTGTTTCTCCTAATCAA+CGG | + | chr5_2:10268937-10268956 | Msa0756200:CDS | 35.0% | |
| GAAGCTAGTGAAAAAAATGG+AGG | + | chr5_2:10269108-10269127 | Msa0756200:CDS | 35.0% | |
| TAGTGAAAAAAATGGAGGCA+TGG | + | chr5_2:10269113-10269132 | Msa0756200:CDS | 35.0% | |
| GAGGCATGGTTTAAAGATAA+CGG | + | chr5_2:10269127-10269146 | Msa0756200:CDS | 35.0% | |
| TTTGTTCTGTGAGCATAAAC+GGG | - | chr5_2:10269262-10269281 | None:intergenic | 35.0% | |
| ACGGTTACGGTAGAATATAA+CGG | - | chr5_2:10269329-10269348 | None:intergenic | 35.0% | |
| AAAACTCTACGGTAGAGAAA+CGG | - | chr5_2:10269348-10269367 | None:intergenic | 35.0% | |
| GTCATTAGGGAAAAACTCTA+CGG | - | chr5_2:10269359-10269378 | None:intergenic | 35.0% | |
| CTTAAAATAGCCCAAGAACA+AGG | - | chr5_2:10269493-10269512 | None:intergenic | 35.0% | |
| !! | CTTGGGCTATTTTAAGTGTT+TGG | + | chr5_2:10269497-10269516 | Msa0756200:CDS | 35.0% |
| !! | TAAAGAGGTTTTTAAGCTCG+AGG | + | chr5_2:10269525-10269544 | Msa0756200:CDS | 35.0% |
| ! | TGCTAAAACGACACGTATTT+TGG | + | chr5_2:10269579-10269598 | Msa0756200:CDS | 35.0% |
| !!! | TCATTTTTTGTATGGGCTTG+GGG | + | chr5_2:10269663-10269682 | Msa0756200:CDS | 35.0% |
| TAACCATCTTCACCTTCTTT+GGG | - | chr5_2:10269696-10269715 | None:intergenic | 35.0% | |
| TTAACCATCTTCACCTTCTT+TGG | - | chr5_2:10269697-10269716 | None:intergenic | 35.0% | |
| AAAGAAGGTGAAGATGGTTA+AGG | + | chr5_2:10269696-10269715 | Msa0756200:CDS | 35.0% | |
| CATAATTTGGCTATGGAATG+TGG | + | chr5_2:10269736-10269755 | Msa0756200:CDS | 35.0% | |
| ! | GATTATAGTGATGGTTCTGT+TGG | + | chr5_2:10269874-10269893 | Msa0756200:CDS | 35.0% |
| CTCTCGAACAATCACACTAA+CGG | - | chr5_2:10268467-10268486 | None:intergenic | 40.0% | |
| GTTGAAAGGACATGTGAAGT+TGG | + | chr5_2:10268523-10268542 | Msa0756200:CDS | 40.0% | |
| ! | AAGAGAGAAAGTTGGTCACT+AGG | - | chr5_2:10268550-10268569 | None:intergenic | 40.0% |
| TATACCAGCATGAGGAAAGA+AGG | - | chr5_2:10268616-10268635 | None:intergenic | 40.0% | |
| TCTATGTTCGTGGTTTCAAC+AGG | + | chr5_2:10268773-10268792 | Msa0756200:intron | 40.0% | |
| !! | AAGCGAGTTTGGTGTAAACT+GGG | - | chr5_2:10268905-10268924 | None:intergenic | 40.0% |
| !! | TAAGCGAGTTTGGTGTAAAC+TGG | - | chr5_2:10268906-10268925 | None:intergenic | 40.0% |
| GCCTAAAATGTAAGCGAGTT+TGG | - | chr5_2:10268916-10268935 | None:intergenic | 40.0% | |
| GTTGATTAGGAGAAACACGA+AGG | - | chr5_2:10268938-10268957 | None:intergenic | 40.0% | |
| !!! | TGTACTGTTTTTGATGGTGC+AGG | + | chr5_2:10269068-10269087 | Msa0756200:intron | 40.0% |
| !!! | TTTTTGATGGTGCAGGAGAA+TGG | + | chr5_2:10269075-10269094 | Msa0756200:intron | 40.0% |
| !!! | TTTTGATGGTGCAGGAGAAT+GGG | + | chr5_2:10269076-10269095 | Msa0756200:intron | 40.0% |
| ! | CGGCGCTGAATATTCATATA+TGG | + | chr5_2:10269147-10269166 | Msa0756200:CDS | 40.0% |
| TTGTTCTGTGAGCATAAACG+GGG | - | chr5_2:10269261-10269280 | None:intergenic | 40.0% | |
| AGAAGGAGTTAACGGAATGA+TGG | - | chr5_2:10269302-10269321 | None:intergenic | 40.0% | |
| TAGAATATAACGGCGTCAGA+AGG | - | chr5_2:10269319-10269338 | None:intergenic | 40.0% | |
| GAACAGCGTCAATGTCATTA+GGG | - | chr5_2:10269372-10269391 | None:intergenic | 40.0% | |
| AGAACAGCGTCAATGTCATT+AGG | - | chr5_2:10269373-10269392 | None:intergenic | 40.0% | |
| GGTCCAAAAGAAACCTATCT+GGG | - | chr5_2:10269468-10269487 | None:intergenic | 40.0% | |
| AAATAGCCCAAGAACAAGGT+GGG | - | chr5_2:10269489-10269508 | None:intergenic | 40.0% | |
| AAAATAGCCCAAGAACAAGG+TGG | - | chr5_2:10269490-10269509 | None:intergenic | 40.0% | |
| !! | AAACGACACGTATTTTGGAC+CGG | + | chr5_2:10269584-10269603 | Msa0756200:CDS | 40.0% |
| CCAAAAGGCCTAAACAAATC+CGG | - | chr5_2:10269640-10269659 | None:intergenic | 40.0% | |
| !! | CGGATTTGTTTAGGCCTTTT+GGG | + | chr5_2:10269638-10269657 | Msa0756200:CDS | 40.0% |
| !!! | CATTTTTTGTATGGGCTTGG+GGG | + | chr5_2:10269664-10269683 | Msa0756200:CDS | 40.0% |
| ATTATGCGCAAACCCACAAA+GGG | - | chr5_2:10269722-10269741 | None:intergenic | 40.0% | |
| AATTATGCGCAAACCCACAA+AGG | - | chr5_2:10269723-10269742 | None:intergenic | 40.0% | |
| TTGTGGGTTTGCGCATAATT+TGG | + | chr5_2:10269723-10269742 | Msa0756200:CDS | 40.0% | |
| GTTTGCGCATAATTTGGCTA+TGG | + | chr5_2:10269729-10269748 | Msa0756200:CDS | 40.0% | |
| TTGCTTCATGTGAACCATTG+AGG | + | chr5_2:10269782-10269801 | Msa0756200:CDS | 40.0% | |
| TCATGTGAACCATTGAGGTT+TGG | + | chr5_2:10269787-10269806 | Msa0756200:CDS | 40.0% | |
| TGAGGTATACCAAACCTCAA+TGG | - | chr5_2:10269799-10269818 | None:intergenic | 40.0% | |
| ! | TGAGGTTTGGTATACCTCAT+TGG | + | chr5_2:10269800-10269819 | Msa0756200:CDS | 40.0% |
| !! | CTCTCTAGGATCCACAAAAA+TGG | - | chr5_2:10269929-10269948 | None:intergenic | 40.0% |
| CTCTCGAACAATCACACTAA+CGG | - | chr5_2:10268467-10268486 | None:intergenic | 40.0% | |
| GTTGAAAGGACATGTGAAGT+TGG | + | chr5_2:10268523-10268542 | Msa0756200:CDS | 40.0% | |
| ! | AAGAGAGAAAGTTGGTCACT+AGG | - | chr5_2:10268550-10268569 | None:intergenic | 40.0% |
| TATACCAGCATGAGGAAAGA+AGG | - | chr5_2:10268616-10268635 | None:intergenic | 40.0% | |
| TCTATGTTCGTGGTTTCAAC+AGG | + | chr5_2:10268773-10268792 | Msa0756200:intron | 40.0% | |
| !! | AAGCGAGTTTGGTGTAAACT+GGG | - | chr5_2:10268905-10268924 | None:intergenic | 40.0% |
| !! | TAAGCGAGTTTGGTGTAAAC+TGG | - | chr5_2:10268906-10268925 | None:intergenic | 40.0% |
| GCCTAAAATGTAAGCGAGTT+TGG | - | chr5_2:10268916-10268935 | None:intergenic | 40.0% | |
| GTTGATTAGGAGAAACACGA+AGG | - | chr5_2:10268938-10268957 | None:intergenic | 40.0% | |
| !!! | TGTACTGTTTTTGATGGTGC+AGG | + | chr5_2:10269068-10269087 | Msa0756200:intron | 40.0% |
| !!! | TTTTTGATGGTGCAGGAGAA+TGG | + | chr5_2:10269075-10269094 | Msa0756200:intron | 40.0% |
| !!! | TTTTGATGGTGCAGGAGAAT+GGG | + | chr5_2:10269076-10269095 | Msa0756200:intron | 40.0% |
| ! | CGGCGCTGAATATTCATATA+TGG | + | chr5_2:10269147-10269166 | Msa0756200:CDS | 40.0% |
| TTGTTCTGTGAGCATAAACG+GGG | - | chr5_2:10269261-10269280 | None:intergenic | 40.0% | |
| AGAAGGAGTTAACGGAATGA+TGG | - | chr5_2:10269302-10269321 | None:intergenic | 40.0% | |
| TAGAATATAACGGCGTCAGA+AGG | - | chr5_2:10269319-10269338 | None:intergenic | 40.0% | |
| GAACAGCGTCAATGTCATTA+GGG | - | chr5_2:10269372-10269391 | None:intergenic | 40.0% | |
| AGAACAGCGTCAATGTCATT+AGG | - | chr5_2:10269373-10269392 | None:intergenic | 40.0% | |
| GGTCCAAAAGAAACCTATCT+GGG | - | chr5_2:10269468-10269487 | None:intergenic | 40.0% | |
| AAATAGCCCAAGAACAAGGT+GGG | - | chr5_2:10269489-10269508 | None:intergenic | 40.0% | |
| AAAATAGCCCAAGAACAAGG+TGG | - | chr5_2:10269490-10269509 | None:intergenic | 40.0% | |
| !! | AAACGACACGTATTTTGGAC+CGG | + | chr5_2:10269584-10269603 | Msa0756200:CDS | 40.0% |
| CCAAAAGGCCTAAACAAATC+CGG | - | chr5_2:10269640-10269659 | None:intergenic | 40.0% | |
| !! | CGGATTTGTTTAGGCCTTTT+GGG | + | chr5_2:10269638-10269657 | Msa0756200:CDS | 40.0% |
| !!! | CATTTTTTGTATGGGCTTGG+GGG | + | chr5_2:10269664-10269683 | Msa0756200:CDS | 40.0% |
| ATTATGCGCAAACCCACAAA+GGG | - | chr5_2:10269722-10269741 | None:intergenic | 40.0% | |
| AATTATGCGCAAACCCACAA+AGG | - | chr5_2:10269723-10269742 | None:intergenic | 40.0% | |
| TTGTGGGTTTGCGCATAATT+TGG | + | chr5_2:10269723-10269742 | Msa0756200:CDS | 40.0% | |
| GTTTGCGCATAATTTGGCTA+TGG | + | chr5_2:10269729-10269748 | Msa0756200:CDS | 40.0% | |
| TTGCTTCATGTGAACCATTG+AGG | + | chr5_2:10269782-10269801 | Msa0756200:CDS | 40.0% | |
| TCATGTGAACCATTGAGGTT+TGG | + | chr5_2:10269787-10269806 | Msa0756200:CDS | 40.0% | |
| TGAGGTATACCAAACCTCAA+TGG | - | chr5_2:10269799-10269818 | None:intergenic | 40.0% | |
| ! | TGAGGTTTGGTATACCTCAT+TGG | + | chr5_2:10269800-10269819 | Msa0756200:CDS | 40.0% |
| !! | CTCTCTAGGATCCACAAAAA+TGG | - | chr5_2:10269929-10269948 | None:intergenic | 40.0% |
| TGTCGGTGAAGAGAGAAAGT+TGG | - | chr5_2:10268558-10268577 | None:intergenic | 45.0% | |
| ATGTTCGTGGTTTCAACAGG+TGG | + | chr5_2:10268776-10268795 | Msa0756200:intron | 45.0% | |
| !! | TTGGTAGCGTACCGTTGATT+AGG | - | chr5_2:10268951-10268970 | None:intergenic | 45.0% |
| TGACGAGAATTGACGGTGTA+CGG | - | chr5_2:10269237-10269256 | None:intergenic | 45.0% | |
| CTACGGTAGAGAAACGGTTA+CGG | - | chr5_2:10269342-10269361 | None:intergenic | 45.0% | |
| ! | ACTTTTCTTGCCGTACCAAG+TGG | + | chr5_2:10269415-10269434 | Msa0756200:CDS | 45.0% |
| ! | CTTTTCTTGCCGTACCAAGT+GGG | + | chr5_2:10269416-10269435 | Msa0756200:CDS | 45.0% |
| GGTCCTACAGTGTCAAAACA+TGG | + | chr5_2:10269437-10269456 | Msa0756200:CDS | 45.0% | |
| !!! | AGGCCATGTTTTGACACTGT+AGG | - | chr5_2:10269443-10269462 | None:intergenic | 45.0% |
| TACAGTGTCAAAACATGGCC+TGG | + | chr5_2:10269442-10269461 | Msa0756200:CDS | 45.0% | |
| AAAAGAAACCTATCTGGGCC+AGG | - | chr5_2:10269463-10269482 | None:intergenic | 45.0% | |
| ! | TGGCCCAGATAGGTTTCTTT+TGG | + | chr5_2:10269462-10269481 | Msa0756200:CDS | 45.0% |
| GGGTCCAAAAGAAACCTATC+TGG | - | chr5_2:10269469-10269488 | None:intergenic | 45.0% | |
| ! | TTTTGGACCCACCTTGTTCT+TGG | + | chr5_2:10269479-10269498 | Msa0756200:CDS | 45.0% |
| TTTGGACCCACCTTGTTCTT+GGG | + | chr5_2:10269480-10269499 | Msa0756200:CDS | 45.0% | |
| !! | GTTTTTAAGCTCGAGGTACG+TGG | + | chr5_2:10269532-10269551 | Msa0756200:CDS | 45.0% |
| !! | AACGACACGTATTTTGGACC+GGG | + | chr5_2:10269585-10269604 | Msa0756200:CDS | 45.0% |
| CTAAACAAATCCGGAACCGA+CGG | - | chr5_2:10269631-10269650 | None:intergenic | 45.0% | |
| !! | CCGGATTTGTTTAGGCCTTT+TGG | + | chr5_2:10269637-10269656 | Msa0756200:CDS | 45.0% |
| AAGATGGTTAAGGCCCTTTG+TGG | + | chr5_2:10269706-10269725 | Msa0756200:CDS | 45.0% | |
| AGATGGTTAAGGCCCTTTGT+GGG | + | chr5_2:10269707-10269726 | Msa0756200:CDS | 45.0% | |
| !! | GTGATGGTTCTGTTGGTGAT+TGG | + | chr5_2:10269881-10269900 | Msa0756200:CDS | 45.0% |
| ATTGGACCAAGTCTATGCCA+GGG | + | chr5_2:10269899-10269918 | Msa0756200:CDS | 45.0% | |
| TCCACAAAAATGGAGATCCC+TGG | - | chr5_2:10269919-10269938 | None:intergenic | 45.0% | |
| TGTCGGTGAAGAGAGAAAGT+TGG | - | chr5_2:10268558-10268577 | None:intergenic | 45.0% | |
| ATGTTCGTGGTTTCAACAGG+TGG | + | chr5_2:10268776-10268795 | Msa0756200:intron | 45.0% | |
| !! | TTGGTAGCGTACCGTTGATT+AGG | - | chr5_2:10268951-10268970 | None:intergenic | 45.0% |
| TGACGAGAATTGACGGTGTA+CGG | - | chr5_2:10269237-10269256 | None:intergenic | 45.0% | |
| CTACGGTAGAGAAACGGTTA+CGG | - | chr5_2:10269342-10269361 | None:intergenic | 45.0% | |
| ! | ACTTTTCTTGCCGTACCAAG+TGG | + | chr5_2:10269415-10269434 | Msa0756200:CDS | 45.0% |
| ! | CTTTTCTTGCCGTACCAAGT+GGG | + | chr5_2:10269416-10269435 | Msa0756200:CDS | 45.0% |
| GGTCCTACAGTGTCAAAACA+TGG | + | chr5_2:10269437-10269456 | Msa0756200:CDS | 45.0% | |
| !!! | AGGCCATGTTTTGACACTGT+AGG | - | chr5_2:10269443-10269462 | None:intergenic | 45.0% |
| TACAGTGTCAAAACATGGCC+TGG | + | chr5_2:10269442-10269461 | Msa0756200:CDS | 45.0% | |
| AAAAGAAACCTATCTGGGCC+AGG | - | chr5_2:10269463-10269482 | None:intergenic | 45.0% | |
| ! | TGGCCCAGATAGGTTTCTTT+TGG | + | chr5_2:10269462-10269481 | Msa0756200:CDS | 45.0% |
| GGGTCCAAAAGAAACCTATC+TGG | - | chr5_2:10269469-10269488 | None:intergenic | 45.0% | |
| ! | TTTTGGACCCACCTTGTTCT+TGG | + | chr5_2:10269479-10269498 | Msa0756200:CDS | 45.0% |
| TTTGGACCCACCTTGTTCTT+GGG | + | chr5_2:10269480-10269499 | Msa0756200:CDS | 45.0% | |
| !! | GTTTTTAAGCTCGAGGTACG+TGG | + | chr5_2:10269532-10269551 | Msa0756200:CDS | 45.0% |
| !! | AACGACACGTATTTTGGACC+GGG | + | chr5_2:10269585-10269604 | Msa0756200:CDS | 45.0% |
| CTAAACAAATCCGGAACCGA+CGG | - | chr5_2:10269631-10269650 | None:intergenic | 45.0% | |
| !! | CCGGATTTGTTTAGGCCTTT+TGG | + | chr5_2:10269637-10269656 | Msa0756200:CDS | 45.0% |
| AAGATGGTTAAGGCCCTTTG+TGG | + | chr5_2:10269706-10269725 | Msa0756200:CDS | 45.0% | |
| AGATGGTTAAGGCCCTTTGT+GGG | + | chr5_2:10269707-10269726 | Msa0756200:CDS | 45.0% | |
| !! | GTGATGGTTCTGTTGGTGAT+TGG | + | chr5_2:10269881-10269900 | Msa0756200:CDS | 45.0% |
| ATTGGACCAAGTCTATGCCA+GGG | + | chr5_2:10269899-10269918 | Msa0756200:CDS | 45.0% | |
| TCCACAAAAATGGAGATCCC+TGG | - | chr5_2:10269919-10269938 | None:intergenic | 45.0% | |
| TCTCTCTTCACCGACATGCT+TGG | + | chr5_2:10268562-10268581 | Msa0756200:CDS | 50.0% | |
| AATGGGGTCACCAAGCATGT+CGG | - | chr5_2:10268575-10268594 | None:intergenic | 50.0% | |
| TGAGGAAAGAAGGTGAGTGG+CGG | - | chr5_2:10268606-10268625 | None:intergenic | 50.0% | |
| GCATGAGGAAAGAAGGTGAG+TGG | - | chr5_2:10268609-10268628 | None:intergenic | 50.0% | |
| CTCACCTTCTTTCCTCATGC+TGG | + | chr5_2:10268609-10268628 | Msa0756200:CDS | 50.0% | |
| TGGTGCAGGAGAATGGGAAT+AGG | + | chr5_2:10269082-10269101 | Msa0756200:intron | 50.0% | |
| GGTGCAGGAGAATGGGAATA+GGG | + | chr5_2:10269083-10269102 | Msa0756200:intron | 50.0% | |
| ACGGGGTTGACGAGAATTGA+CGG | - | chr5_2:10269244-10269263 | None:intergenic | 50.0% | |
| ACGGCGTCAGAAGGAGTTAA+CGG | - | chr5_2:10269310-10269329 | None:intergenic | 50.0% | |
| ACTGTAGGACCCACTTGGTA+CGG | - | chr5_2:10269428-10269447 | None:intergenic | 50.0% | |
| TTGACACTGTAGGACCCACT+TGG | - | chr5_2:10269433-10269452 | None:intergenic | 50.0% | |
| !! | CGTCGGTTCCGGATTTGTTT+AGG | + | chr5_2:10269629-10269648 | Msa0756200:CDS | 50.0% |
| AGGCCCAAAGAAGGTGAAGA+TGG | + | chr5_2:10269690-10269709 | Msa0756200:CDS | 50.0% | |
| TTGGCTATGGAATGTGGGTG+TGG | + | chr5_2:10269742-10269761 | Msa0756200:CDS | 50.0% | |
| TGGCTATGGAATGTGGGTGT+GGG | + | chr5_2:10269743-10269762 | Msa0756200:CDS | 50.0% | |
| GATTGGACCAAGTCTATGCC+AGG | + | chr5_2:10269898-10269917 | Msa0756200:CDS | 50.0% | |
| !! | GCCAGGGATCTCCATTTTTG+TGG | + | chr5_2:10269915-10269934 | Msa0756200:CDS | 50.0% |
| TCTCTCTTCACCGACATGCT+TGG | + | chr5_2:10268562-10268581 | Msa0756200:CDS | 50.0% | |
| AATGGGGTCACCAAGCATGT+CGG | - | chr5_2:10268575-10268594 | None:intergenic | 50.0% | |
| TGAGGAAAGAAGGTGAGTGG+CGG | - | chr5_2:10268606-10268625 | None:intergenic | 50.0% | |
| GCATGAGGAAAGAAGGTGAG+TGG | - | chr5_2:10268609-10268628 | None:intergenic | 50.0% | |
| CTCACCTTCTTTCCTCATGC+TGG | + | chr5_2:10268609-10268628 | Msa0756200:CDS | 50.0% | |
| TGGTGCAGGAGAATGGGAAT+AGG | + | chr5_2:10269082-10269101 | Msa0756200:intron | 50.0% | |
| GGTGCAGGAGAATGGGAATA+GGG | + | chr5_2:10269083-10269102 | Msa0756200:intron | 50.0% | |
| ACGGGGTTGACGAGAATTGA+CGG | - | chr5_2:10269244-10269263 | None:intergenic | 50.0% | |
| ACGGCGTCAGAAGGAGTTAA+CGG | - | chr5_2:10269310-10269329 | None:intergenic | 50.0% | |
| ACTGTAGGACCCACTTGGTA+CGG | - | chr5_2:10269428-10269447 | None:intergenic | 50.0% | |
| TTGACACTGTAGGACCCACT+TGG | - | chr5_2:10269433-10269452 | None:intergenic | 50.0% | |
| !! | CGTCGGTTCCGGATTTGTTT+AGG | + | chr5_2:10269629-10269648 | Msa0756200:CDS | 50.0% |
| AGGCCCAAAGAAGGTGAAGA+TGG | + | chr5_2:10269690-10269709 | Msa0756200:CDS | 50.0% | |
| TTGGCTATGGAATGTGGGTG+TGG | + | chr5_2:10269742-10269761 | Msa0756200:CDS | 50.0% | |
| TGGCTATGGAATGTGGGTGT+GGG | + | chr5_2:10269743-10269762 | Msa0756200:CDS | 50.0% | |
| GATTGGACCAAGTCTATGCC+AGG | + | chr5_2:10269898-10269917 | Msa0756200:CDS | 50.0% | |
| !! | GCCAGGGATCTCCATTTTTG+TGG | + | chr5_2:10269915-10269934 | Msa0756200:CDS | 50.0% |
| ! | TGCTTGGTGACCCCATTTGC+AGG | + | chr5_2:10268578-10268597 | Msa0756200:CDS | 55.0% |
| ! | GCTTGGTGACCCCATTTGCA+GGG | + | chr5_2:10268579-10268598 | Msa0756200:CDS | 55.0% |
| AAACATGGCCTGGCCCAGAT+AGG | + | chr5_2:10269452-10269471 | Msa0756200:CDS | 55.0% | |
| ACCGACGGTACCTTCAACCA+CGG | - | chr5_2:10269616-10269635 | None:intergenic | 55.0% | |
| !! | GTTGAAGGTACCGTCGGTTC+CGG | + | chr5_2:10269618-10269637 | Msa0756200:CDS | 55.0% |
| TTGTATGGGCTTGGGGGTGA+AGG | + | chr5_2:10269670-10269689 | Msa0756200:CDS | 55.0% | |
| GGCTATGGAATGTGGGTGTG+GGG | + | chr5_2:10269744-10269763 | Msa0756200:CDS | 55.0% | |
| GGAGATCCCTGGCATAGACT+TGG | - | chr5_2:10269908-10269927 | None:intergenic | 55.0% | |
| ! | TGCTTGGTGACCCCATTTGC+AGG | + | chr5_2:10268578-10268597 | Msa0756200:CDS | 55.0% |
| ! | GCTTGGTGACCCCATTTGCA+GGG | + | chr5_2:10268579-10268598 | Msa0756200:CDS | 55.0% |
| AAACATGGCCTGGCCCAGAT+AGG | + | chr5_2:10269452-10269471 | Msa0756200:CDS | 55.0% | |
| ACCGACGGTACCTTCAACCA+CGG | - | chr5_2:10269616-10269635 | None:intergenic | 55.0% | |
| !! | GTTGAAGGTACCGTCGGTTC+CGG | + | chr5_2:10269618-10269637 | Msa0756200:CDS | 55.0% |
| TTGTATGGGCTTGGGGGTGA+AGG | + | chr5_2:10269670-10269689 | Msa0756200:CDS | 55.0% | |
| GGCTATGGAATGTGGGTGTG+GGG | + | chr5_2:10269744-10269763 | Msa0756200:CDS | 55.0% | |
| GGAGATCCCTGGCATAGACT+TGG | - | chr5_2:10269908-10269927 | None:intergenic | 55.0% | |
| !! | AGTGGCGGACCCTGCAAATG+GGG | - | chr5_2:10268591-10268610 | None:intergenic | 60.0% |
| !! | GAGTGGCGGACCCTGCAAAT+GGG | - | chr5_2:10268592-10268611 | None:intergenic | 60.0% |
| !! | TGAGTGGCGGACCCTGCAAA+TGG | - | chr5_2:10268593-10268612 | None:intergenic | 60.0% |
| ! | TTTTGGACCGGGCTTTGCCG+TGG | + | chr5_2:10269596-10269615 | Msa0756200:CDS | 60.0% |
| CCTTCAACCACGGCAAAGCC+CGG | - | chr5_2:10269606-10269625 | None:intergenic | 60.0% | |
| !! | GCCGTGGTTGAAGGTACCGT+CGG | + | chr5_2:10269612-10269631 | Msa0756200:CDS | 60.0% |
| TGGGGGTGAAGGCCCAAAGA+AGG | + | chr5_2:10269681-10269700 | Msa0756200:CDS | 60.0% | |
| GGAATGTGGGTGTGGGGTTG+TGG | + | chr5_2:10269750-10269769 | Msa0756200:CDS | 60.0% | |
| GTGTGGGGTTGTGGCTACTG+AGG | + | chr5_2:10269759-10269778 | Msa0756200:CDS | 60.0% | |
| !! | AGTGGCGGACCCTGCAAATG+GGG | - | chr5_2:10268591-10268610 | None:intergenic | 60.0% |
| !! | GAGTGGCGGACCCTGCAAAT+GGG | - | chr5_2:10268592-10268611 | None:intergenic | 60.0% |
| !! | TGAGTGGCGGACCCTGCAAA+TGG | - | chr5_2:10268593-10268612 | None:intergenic | 60.0% |
| ! | TTTTGGACCGGGCTTTGCCG+TGG | + | chr5_2:10269596-10269615 | Msa0756200:CDS | 60.0% |
| CCTTCAACCACGGCAAAGCC+CGG | - | chr5_2:10269606-10269625 | None:intergenic | 60.0% | |
| !! | GCCGTGGTTGAAGGTACCGT+CGG | + | chr5_2:10269612-10269631 | Msa0756200:CDS | 60.0% |
| TGGGGGTGAAGGCCCAAAGA+AGG | + | chr5_2:10269681-10269700 | Msa0756200:CDS | 60.0% | |
| GGAATGTGGGTGTGGGGTTG+TGG | + | chr5_2:10269750-10269769 | Msa0756200:CDS | 60.0% | |
| GTGTGGGGTTGTGGCTACTG+AGG | + | chr5_2:10269759-10269778 | Msa0756200:CDS | 60.0% | |
| CCGGGCTTTGCCGTGGTTGA+AGG | + | chr5_2:10269603-10269622 | Msa0756200:CDS | 65.0% | |
| CCGGGCTTTGCCGTGGTTGA+AGG | + | chr5_2:10269603-10269622 | Msa0756200:CDS | 65.0% | |
| GGCGCGTCGCGTGTCAAGCG+CGG | + | chr5_2:10269553-10269572 | Msa0756200:CDS | 75.0% | |
| GCGCGTCGCGTGTCAAGCGC+GGG | + | chr5_2:10269554-10269573 | Msa0756200:CDS | 75.0% | |
| GGCGCGTCGCGTGTCAAGCG+CGG | + | chr5_2:10269553-10269572 | Msa0756200:CDS | 75.0% | |
| GCGCGTCGCGTGTCAAGCGC+GGG | + | chr5_2:10269554-10269573 | Msa0756200:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 10268448 | 10269954 | 10268448 | ID=Msa0756200;Name=Msa0756200 |
| chr5_2 | mRNA | 10268448 | 10269954 | 10268448 | ID=Msa0756200-mRNA-1;Parent=Msa0756200;Name=Msa0756200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|403 |
| chr5_2 | exon | 10268448 | 10268630 | 10268448 | ID=Msa0756200-mRNA-1:exon:4678;Parent=Msa0756200-mRNA-1 |
| chr5_2 | exon | 10268795 | 10268958 | 10268795 | ID=Msa0756200-mRNA-1:exon:4679;Parent=Msa0756200-mRNA-1 |
| chr5_2 | exon | 10269090 | 10269954 | 10269090 | ID=Msa0756200-mRNA-1:exon:4680;Parent=Msa0756200-mRNA-1 |
| chr5_2 | CDS | 10268448 | 10268630 | 10268448 | ID=Msa0756200-mRNA-1:cds;Parent=Msa0756200-mRNA-1 |
| chr5_2 | CDS | 10268795 | 10268958 | 10268795 | ID=Msa0756200-mRNA-1:cds;Parent=Msa0756200-mRNA-1 |
| chr5_2 | CDS | 10269090 | 10269954 | 10269090 | ID=Msa0756200-mRNA-1:cds;Parent=Msa0756200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
