AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0776650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776650 MtrunA17_Chr5g0448351 94.523 1205 49 7 1 1194 1 1199 0.0 2329
Msa0776650 MtrunA17_Chr5g0427251 41.076 1283 612 28 1 1192 1 1230 0.0 905
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776650 AT5G48310.2 55.938 1162 446 17 56 1194 11 1129 0.0 1241
Msa0776650 AT5G48310.1 55.603 1178 452 17 56 1194 11 1156 0.0 1236
Msa0776650 AT4G24610.3 45.047 959 462 13 285 1192 210 1154 0.0 840
Msa0776650 AT4G24610.1 45.047 959 462 13 285 1192 206 1150 0.0 840
Msa0776650 AT4G24610.2 45.000 960 462 14 285 1192 210 1155 0.0 836
Msa0776650 AT4G24610.4 45.000 960 462 14 285 1192 206 1151 0.0 835
Msa0776650 AT5G65440.6 39.098 931 491 15 308 1184 175 1083 0.0 707
Msa0776650 AT5G65440.4 39.098 931 491 15 308 1184 175 1083 0.0 707
Msa0776650 AT5G65440.7 39.098 931 491 15 308 1184 175 1083 0.0 707
Msa0776650 AT5G65440.1 39.098 931 491 15 308 1184 134 1042 0.0 706
Msa0776650 AT5G65440.8 39.098 931 491 15 308 1184 134 1042 0.0 706
Msa0776650 AT5G65440.9 39.098 931 491 15 308 1184 134 1042 0.0 706
Msa0776650 AT5G65440.3 37.720 965 491 16 308 1184 175 1117 0.0 689
Msa0776650 AT5G65440.5 38.106 866 460 15 308 1119 175 1018 0.0 634
Msa0776650 AT5G65440.2 38.106 866 460 15 308 1119 134 977 0.0 634

Find 274 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTTAGCCGCAAGTTTC+GGG 0.157218 5_2:+55014860 None:intergenic
TCCCGAAACTTGCGGCTAAA+TGG 0.173469 5_2:-55014861 Msa0776650:CDS
GCCTCAATACTCCTTGTATT+TGG 0.182439 5_2:-55012516 Msa0776650:CDS
TCGCTTGTAAAGGGAAAATT+AGG 0.183051 5_2:-55011006 Msa0776650:three_prime_UTR
TATGATGAGGAACAGTTATT+TGG 0.188229 5_2:-55018309 Msa0776650:CDS
ACTTATTTGCAAGCAATAAT+AGG 0.201654 5_2:-55011944 Msa0776650:CDS
CTCACTTCTGGCCTTCATTA+GGG 0.203293 5_2:+55014571 None:intergenic
TTTAGGAGTAAGGTTATTAT+TGG 0.222301 5_2:+55018533 None:intergenic
CTTCTAGAATTAACAGTATT+AGG 0.238150 5_2:+55018198 None:intergenic
TCTCACTTCTGGCCTTCATT+AGG 0.239461 5_2:+55014570 None:intergenic
GTAATTGTGAAACAAATTTC+TGG 0.249080 5_2:+55012805 None:intergenic
GGAGGTAAAGATGGAGATTT+AGG 0.251463 5_2:+55018516 None:intergenic
ACACAGCTCTGTGCTATAAA+TGG 0.254036 5_2:+55013075 None:intergenic
GAGCCAAGGGGATGCTTTAT+TGG 0.259764 5_2:-55015698 Msa0776650:CDS
GCCCATTTAGCCGCAAGTTT+CGG 0.273486 5_2:+55014859 None:intergenic
TTATCATTAAGGTAAGAAAT+TGG 0.284007 5_2:+55015628 None:intergenic
CTCACAGAGAAGTATACTTT+TGG 0.286313 5_2:-55014006 Msa0776650:intron
GAGGAACAGTTATTTGGATT+TGG 0.296334 5_2:-55018303 Msa0776650:CDS
TGATAGGGTACCACTCTTAT+TGG 0.298776 5_2:+55010867 None:intergenic
TTTGAATGATTCTGTTGATT+TGG 0.300090 5_2:-55018064 Msa0776650:CDS
AGCCTCTTGCCCATGCTTGC+AGG 0.302906 5_2:+55017043 None:intergenic
ACAGGTTTAACCGATCATTT+TGG 0.303277 5_2:-55013909 Msa0776650:CDS
CACATACAGGATTATCATTA+AGG 0.303700 5_2:+55015617 None:intergenic
CTGGCTCTTCGAAGTGCCTT+TGG 0.307080 5_2:-55016985 Msa0776650:CDS
GACAGACTGCAGCAAGAAAA+AGG 0.309951 5_2:-55013565 Msa0776650:intron
ATGGATCTTGCTACGCTCTT+GGG 0.310033 5_2:-55011445 Msa0776650:CDS
CATTCCTTTACAAAAGTGAT+AGG 0.315414 5_2:+55010851 None:intergenic
ACTTGCAAGTGAAGTCTCTT+TGG 0.319778 5_2:+55012281 None:intergenic
GCTGACCATGGATTGTATTA+TGG 0.323976 5_2:+55013387 None:intergenic
GACATATTGCTATGAAGATT+TGG 0.329067 5_2:+55011671 None:intergenic
AGATTTACTGATGGAGAGTT+AGG 0.331074 5_2:-55018177 Msa0776650:CDS
TTCTATAAGAAATGAAATTC+AGG 0.331997 5_2:-55013429 Msa0776650:CDS
ACTCCATGTGGAAGTGAAAT+TGG 0.340049 5_2:-55018126 Msa0776650:CDS
ATAGCACAGAGCTGTGTAAA+AGG 0.344097 5_2:-55013069 Msa0776650:CDS
CACAAGCTCCAGGCAGTCCT+TGG 0.345260 5_2:+55014610 None:intergenic
GACAGGATGCCCATGAATTT+AGG 0.345736 5_2:+55012044 None:intergenic
CTTATTTGCAAGCAATAATA+GGG 0.349385 5_2:-55011943 Msa0776650:CDS
TCATCATAACATTGTGCAAT+TGG 0.352430 5_2:+55018324 None:intergenic
TCATGATAATCTCCACTTCC+AGG 0.356135 5_2:+55016152 None:intergenic
TTCTTGTAGATATCTATTAC+AGG 0.357704 5_2:-55014654 Msa0776650:intron
AATTTCCTTCACGAAGAGTA+TGG 0.362980 5_2:-55010915 Msa0776650:three_prime_UTR
GCTCCTCCTATATTTGTTGA+TGG 0.363206 5_2:-55018030 Msa0776650:CDS
AGTCAGACTTCTCTCACTTC+TGG 0.363501 5_2:+55014559 None:intergenic
CACTCTTATTGGTAAGAGAT+TGG 0.363953 5_2:+55010878 None:intergenic
ATCTCGAGTCATGGAATATA+AGG 0.364375 5_2:-55012958 Msa0776650:intron
GGACTGCCTTCTTAGAATCT+TGG 0.368271 5_2:+55015668 None:intergenic
TACCTTTCAGCAACAGTATT+AGG 0.369090 5_2:+55017859 None:intergenic
CAGAGATAACTTACTTGGTT+AGG 0.370777 5_2:+55012215 None:intergenic
TTCACAATTACATCATGGTT+TGG 0.372780 5_2:-55012793 Msa0776650:CDS
CTTCTGTTGCACTCTTGAGT+TGG 0.373272 5_2:+55016213 None:intergenic
ATGGGAGATAAGAAGTTGTT+TGG 0.376540 5_2:-55012013 Msa0776650:CDS
CAGTTATTTGGATTTGGTAA+TGG 0.380161 5_2:-55018297 Msa0776650:CDS
TATTGATTACCACTTCATAC+TGG 0.382046 5_2:+55012543 None:intergenic
AATGGATCTTGCTACGCTCT+TGG 0.383403 5_2:-55011446 Msa0776650:CDS
GATGCATTTGCTGACTACTA+TGG 0.386031 5_2:-55014819 Msa0776650:CDS
GGAGGAAAGAAAATAGAATA+TGG 0.387361 5_2:-55011472 Msa0776650:CDS
TTCATGTTTCAGTTCTGTGC+AGG 0.393565 5_2:-55012840 Msa0776650:intron
TGGCTCTTCGAAGTGCCTTT+GGG 0.394270 5_2:-55016984 Msa0776650:intron
TAATAGAATCTCTTTCTTGT+TGG 0.405017 5_2:+55010954 None:intergenic
ACTTGCAATATCTCAATAAC+AGG 0.409440 5_2:-55017525 Msa0776650:intron
CCTCGTAGTAACCTCGCTTT+CGG 0.410441 5_2:-55018468 Msa0776650:CDS
AAAGCATCCCCTTGGCTCAA+TGG 0.411838 5_2:+55015703 None:intergenic
CCACAAATTGTTCAGATTCA+AGG 0.412166 5_2:-55011832 Msa0776650:intron
CCCGAAACTTGCGGCTAAAT+GGG 0.412285 5_2:-55014860 Msa0776650:CDS
CCTTCACCATCAACAAATAT+AGG 0.414292 5_2:+55018024 None:intergenic
AAGCATCCCCTTGGCTCAAT+GGG 0.416333 5_2:+55015704 None:intergenic
TTCGTCTATGCCTGCAAGCA+TGG 0.422145 5_2:-55017053 Msa0776650:CDS
TGAAGGTGATGTCGGTTATT+CGG 0.424528 5_2:-55018007 Msa0776650:CDS
CTTGATGAAAACTCGCCAAC+AGG 0.425161 5_2:-55013927 Msa0776650:CDS
GTTATTATTGGAAAGGGTTG+TGG 0.428594 5_2:+55018545 None:intergenic
TCTCAGATGCAAAGATTAAG+AGG 0.429798 5_2:-55011265 Msa0776650:CDS
TGGTGACAACAATCATATAA+AGG 0.432851 5_2:-55015410 Msa0776650:intron
GGCAAGATCCAGCTCTCAAT+TGG 0.438777 5_2:-55015448 Msa0776650:CDS
AGTAAGGTTATTATTGGAAA+GGG 0.440715 5_2:+55018539 None:intergenic
TGATCTTTGTAAAGCAGAAA+AGG 0.441629 5_2:-55012744 Msa0776650:intron
GACATCAAGTATCCTCTTGA+TGG 0.441717 5_2:+55012090 None:intergenic
ATATGCAGAGTGACAGAATT+CGG 0.441939 5_2:-55015507 Msa0776650:intron
TGCAGGCGTCGTAAGTGATA+AGG 0.442938 5_2:+55017076 None:intergenic
TGGTTACCTTGTTGATCCAT+TGG 0.445990 5_2:+55018828 None:intergenic
AAGGTAAGAAATTGGAATCC+TGG 0.447464 5_2:+55015636 None:intergenic
ACATGTGGCTGTGGACTTGA+TGG 0.447824 5_2:+55013019 None:intergenic
GGCATCCTGTCTACCTGTCA+TGG 0.449910 5_2:-55012032 Msa0776650:CDS
GATCAATGTATAAGCAAGTT+GGG 0.451761 5_2:-55016490 Msa0776650:CDS
AAAGTGTTCTCGCTTGTAAA+GGG 0.452871 5_2:-55011015 Msa0776650:three_prime_UTR
GGCTAAATGGGCCATGGAAA+TGG 0.453209 5_2:-55014848 Msa0776650:CDS
AACAAATGACACAGGTTCCA+TGG 0.454278 5_2:-55012640 Msa0776650:intron
TAGGCTTGAGTTTCCACAAC+AGG 0.455044 5_2:+55014927 None:intergenic
ATGAAGTGGTAATCAATAGA+TGG 0.456403 5_2:-55012538 Msa0776650:CDS
AAGATGGAGATTTAGGAGTA+AGG 0.456735 5_2:+55018523 None:intergenic
TTTCTTGTTGGCAAATGCCA+TGG 0.462228 5_2:+55010966 None:intergenic
TATATGTAGAAATAAGTAGA+TGG 0.465515 5_2:+55011151 None:intergenic
GGGAAAATTAGGGCCGCAAA+AGG 0.466296 5_2:-55010995 Msa0776650:three_prime_UTR
ATCTCCCATGACAGGTAGAC+AGG 0.466496 5_2:+55012027 None:intergenic
AGCAGCAGGATAGGAGGTCT+TGG 0.466639 5_2:-55017948 Msa0776650:CDS
AACTCCAACCAAGGACTGCC+TGG 0.468493 5_2:-55014618 Msa0776650:CDS
GTACTGCTGGAAGAGGGGTT+CGG 0.469467 5_2:-55018104 Msa0776650:CDS
GCAGGCGTCGTAAGTGATAA+GGG 0.470911 5_2:+55017077 None:intergenic
TTCCTTGTACTACCTTCAGT+TGG 0.472513 5_2:+55016840 None:intergenic
TTGTTTGGAGAGCAAATGAA+TGG 0.472679 5_2:-55011998 Msa0776650:CDS
TAGCAATATGTCGTGGATTG+TGG 0.475941 5_2:-55011660 Msa0776650:CDS
AGCAATATGTCGTGGATTGT+GGG 0.476986 5_2:-55011659 Msa0776650:CDS
CTCAAGACAAAGAAGGTTGT+GGG 0.479223 5_2:-55016798 Msa0776650:CDS
GTCCATTTGGTAACTTTCTG+AGG 0.479994 5_2:+55013499 None:intergenic
GTGGCGAAAAGTGGTGATCT+AGG 0.480456 5_2:+55018564 None:intergenic
AAAAGTGTTCTCGCTTGTAA+AGG 0.484004 5_2:-55011016 Msa0776650:three_prime_UTR
AAGTTGGGATGGAGTACGTC+AGG 0.485061 5_2:-55016475 Msa0776650:CDS
TTCTTGTTGGCAAATGCCAT+GGG 0.485344 5_2:+55010967 None:intergenic
GTTTCATCCCTTGTGAAAAG+TGG 0.486018 5_2:-55016449 Msa0776650:CDS
TCCAAATACAAGGAGTATTG+AGG 0.487212 5_2:+55012515 None:intergenic
CCGATTCATATGCTAAATTG+AGG 0.487243 5_2:-55014791 Msa0776650:intron
ACCCTCCAACAATATATCAT+AGG 0.489559 5_2:+55014908 None:intergenic
AGATGGTAATGCTGTCCATT+TGG 0.491575 5_2:+55013486 None:intergenic
GTTTCTAAAAGATGAGTGTC+TGG 0.492440 5_2:-55017004 Msa0776650:CDS
AGCTCATTCACATGTGGCTG+TGG 0.493960 5_2:+55013010 None:intergenic
TGGAAGACATCCTAAATTCA+TGG 0.495445 5_2:-55012054 Msa0776650:CDS
TCATGTTTCAGTTCTGTGCA+GGG 0.496350 5_2:-55012839 Msa0776650:intron
AAATGACTCAGCAGCAGGAT+AGG 0.498541 5_2:-55017957 Msa0776650:CDS
CGAAAACGAAGAAGATGAAA+GGG 0.499383 5_2:-55018367 Msa0776650:CDS
CCTCAATTTAGCATATGAAT+CGG 0.500851 5_2:+55014791 None:intergenic
AAGAGGCTGTACTGAGGCCC+CGG 0.501987 5_2:-55017028 Msa0776650:CDS
GGAAGTGAAATTGGTACTGC+TGG 0.503174 5_2:-55018117 Msa0776650:CDS
AGGCAGTCCATGGTGAAGCC+AGG 0.503776 5_2:-55015654 Msa0776650:CDS
ACAACCTTCTTTGTCTTGAG+AGG 0.505297 5_2:+55016801 None:intergenic
TGCCTCAGAAAGTTACCAAA+TGG 0.505968 5_2:-55013501 Msa0776650:CDS
TTTGGTATGCTATCTTTCAA+AGG 0.506151 5_2:+55012299 None:intergenic
TTTGTTTCACAATTACATCA+TGG 0.508017 5_2:-55012798 Msa0776650:CDS
ATGACACAGGTTCCATGGGC+TGG 0.508635 5_2:-55012635 Msa0776650:intron
TCGTCTATGCCTGCAAGCAT+GGG 0.511245 5_2:-55017052 Msa0776650:CDS
TCAAGCCTATGATATATTGT+TGG 0.513388 5_2:-55014913 Msa0776650:CDS
TGGTGAAGTGGAATGATTTG+TGG 0.516170 5_2:+55012607 None:intergenic
TATTGCTATGAAGATTTGGC+TGG 0.516781 5_2:+55011675 None:intergenic
TCTCAAGACAAAGAAGGTTG+TGG 0.517514 5_2:-55016799 Msa0776650:CDS
GAAATTGGTACTGCTGGAAG+AGG 0.520455 5_2:-55018111 Msa0776650:CDS
CCCTTCCTCAAAATTCCACT+AGG 0.520908 5_2:+55018252 None:intergenic
TCACTCTCAGTGACAGAAGA+AGG 0.521728 5_2:-55016404 Msa0776650:intron
GAGTAAGGTTATTATTGGAA+AGG 0.521775 5_2:+55018538 None:intergenic
CGCTTGTAAAGGGAAAATTA+GGG 0.522265 5_2:-55011005 Msa0776650:three_prime_UTR
AAATGAATCAGAGTCATGTT+CGG 0.522569 5_2:-55016189 Msa0776650:CDS
TCATCGGTCTCAGCAGCAGC+AGG 0.523051 5_2:+55018390 None:intergenic
TCACTTCTGGCCTTCATTAG+GGG 0.524637 5_2:+55014572 None:intergenic
TTGTACTTCCAATTGAGAGC+TGG 0.525299 5_2:+55015440 None:intergenic
AGATATTGCAAGTGTGGAGG+AGG 0.526974 5_2:+55017535 None:intergenic
GGATCAATGTATAAGCAAGT+TGG 0.527369 5_2:-55016491 Msa0776650:CDS
TCGTGGATTGTGGGACAGAA+TGG 0.528693 5_2:-55011650 Msa0776650:CDS
AGCCTATGATATATTGTTGG+AGG 0.530615 5_2:-55014910 Msa0776650:CDS
TTCAGTTTCCCATTGAGCCA+AGG 0.531016 5_2:-55015712 Msa0776650:intron
CTACTGTAGACTTGTAGAGC+AGG 0.532410 5_2:+55013852 None:intergenic
AGCTCCAGGCAGTCCTTGGT+TGG 0.532583 5_2:+55014614 None:intergenic
AACAACCATAATACAATCCA+TGG 0.534702 5_2:-55013392 Msa0776650:CDS
TTAGCCGCAAGTTTCGGGAG+TGG 0.537146 5_2:+55014865 None:intergenic
GTAAGTGATAAGGGTTTGCC+AGG 0.537868 5_2:+55017086 None:intergenic
CTTGCTTATACATTGATCCT+CGG 0.538232 5_2:+55016495 None:intergenic
TCTTTCTATGCCCTGTGTAG+AGG 0.538250 5_2:+55017564 None:intergenic
TACACAGGGCATAGAAAGAC+AGG 0.540262 5_2:-55017560 Msa0776650:CDS
GAAAGGGTTGTGGCGAAAAG+TGG 0.541954 5_2:+55018555 None:intergenic
AGTTGGATCAAACAATGCAT+TGG 0.548129 5_2:+55016230 None:intergenic
ACGAAAACGAAGAAGATGAA+AGG 0.548335 5_2:-55018368 Msa0776650:CDS
TCAGTTTCCCATTGAGCCAA+GGG 0.548372 5_2:-55015711 Msa0776650:intron
GGTAAAGACCTCATGAAGGT+TGG 0.548390 5_2:+55011696 None:intergenic
TGTAGAGCAGGATGTAAAGC+TGG 0.549874 5_2:+55013864 None:intergenic
AAAAGTGGTGATCTAGGAAA+AGG 0.549906 5_2:+55018570 None:intergenic
TGTCTTCCACTCTACAATGT+AGG 0.551082 5_2:+55012068 None:intergenic
TTGCAGGCATAGACGAATGC+AGG 0.551829 5_2:+55017059 None:intergenic
GGTCTCAGCAGCAGCAGGAC+AGG 0.552413 5_2:+55018395 None:intergenic
TTTCTCAGCAAATGGTGAAG+TGG 0.552861 5_2:+55012595 None:intergenic
AAGTGGTATACAGTCTATGA+AGG 0.554143 5_2:-55016432 Msa0776650:CDS
GAGACTGATGAATTTGTGTC+GGG 0.554425 5_2:-55013524 Msa0776650:CDS
AGAAGTCCAAGATTCTAAGA+AGG 0.555902 5_2:-55015674 Msa0776650:CDS
TTGAGATATTGCAAGTGTGG+AGG 0.557086 5_2:+55017532 None:intergenic
GTTGATGGTGAAGGTGATGT+CGG 0.557464 5_2:-55018015 Msa0776650:CDS
CCTATATTTGTTGATGGTGA+AGG 0.557712 5_2:-55018024 Msa0776650:CDS
ATTCCTTTACAAAAGTGATA+GGG 0.558365 5_2:+55010852 None:intergenic
AAATGATCGGTTAAACCTGT+TGG 0.559634 5_2:+55013912 None:intergenic
GTAACTCTTTCACAAGCTCC+AGG 0.560180 5_2:+55014600 None:intergenic
GGCTGTGGCAAATATTGAAA+GGG 0.560699 5_2:-55012366 Msa0776650:CDS
TGGATCTTGCTACGCTCTTG+GGG 0.560823 5_2:-55011444 Msa0776650:intron
GTTACTTGATCCCCTAATGA+AGG 0.563068 5_2:-55014582 Msa0776650:CDS
CGATGAAATGACTCAGCAGC+AGG 0.563082 5_2:-55017962 Msa0776650:CDS
CTTCAGGTATGCCGTTGAGA+TGG 0.565249 5_2:+55013469 None:intergenic
GAGAAGCAGAAGTTCGTGAA+AGG 0.567985 5_2:-55011756 Msa0776650:CDS
AAATTGGTACTGCTGGAAGA+GGG 0.568372 5_2:-55018110 Msa0776650:CDS
AATGTATAAGCAAGTTGGGA+TGG 0.569458 5_2:-55016486 Msa0776650:CDS
AATTCTAGAAGATTTACTGA+TGG 0.569546 5_2:-55018186 Msa0776650:CDS
TGAGAACTTTCCTTTCTGCA+TGG 0.569606 5_2:-55013045 Msa0776650:CDS
AGGCTGTGGCAAATATTGAA+AGG 0.569983 5_2:-55012367 Msa0776650:CDS
ACAAATGACACAGGTTCCAT+GGG 0.570078 5_2:-55012639 Msa0776650:intron
CTTGCAGTAGTCAAGATGCC+TGG 0.570788 5_2:-55017104 Msa0776650:CDS
AGAGTGACAGAATTCGGTGG+TGG 0.570925 5_2:-55015501 Msa0776650:CDS
AACTTCTTATCTCCCATGAC+AGG 0.571486 5_2:+55012019 None:intergenic
ACTGCAGAGTGCTCCTGTTG+TGG 0.571685 5_2:-55014940 Msa0776650:intron
TGGATGAAACTGCACTCCAA+TGG 0.572829 5_2:-55018844 Msa0776650:CDS
CAACTTAATCCAGTATGAAG+TGG 0.574199 5_2:-55012552 Msa0776650:CDS
GATTCTGTGAATTGTGATGA+TGG 0.575898 5_2:-55017916 Msa0776650:CDS
TCAAGAAACAACCTCTACAC+AGG 0.577200 5_2:-55017575 Msa0776650:CDS
TATTCTACAGAACTATCTGC+AGG 0.579462 5_2:-55013796 Msa0776650:intron
TTGAACGCGATCTCGAGTCA+TGG 0.579995 5_2:-55012967 Msa0776650:CDS
TGCCTGCAAGCATGGGCAAG+AGG 0.580416 5_2:-55017045 Msa0776650:CDS
TATACAAAGAAGAAAACTGA+AGG 0.581707 5_2:-55016531 Msa0776650:CDS
AAGGTGTAGAAAACACATGA+TGG 0.582937 5_2:-55013546 Msa0776650:CDS
ACAAATATAGGAGGAGCACT+TGG 0.582954 5_2:+55018036 None:intergenic
GGAAGACATCCTAAATTCAT+GGG 0.584196 5_2:-55012053 Msa0776650:CDS
CGTGGATTGTGGGACAGAAT+GGG 0.584754 5_2:-55011649 Msa0776650:CDS
CTTTGCCATACTCTTCGTGA+AGG 0.587668 5_2:+55010910 None:intergenic
GCATCCTGTCTACCTGTCAT+GGG 0.587857 5_2:-55012031 Msa0776650:CDS
GAAAATAGAATATGGTACAA+TGG 0.588488 5_2:-55011464 Msa0776650:CDS
CATGATGATAATGAATGTGT+TGG 0.588840 5_2:-55015469 Msa0776650:CDS
TGCCTAATACTGTTGCTGAA+AGG 0.589120 5_2:-55017861 Msa0776650:intron
GAGTGACAGAATTCGGTGGT+GGG 0.589193 5_2:-55015500 Msa0776650:CDS
ATTGTGGGACAGAATGGGAC+AGG 0.589891 5_2:-55011644 Msa0776650:intron
CTCAGTTAGAGGAGAGCGTG+TGG 0.590106 5_2:+55018602 None:intergenic
TTGATGGTGGCCATGCAGAA+AGG 0.591303 5_2:+55013035 None:intergenic
CATGATAATCTCCACTTCCA+GGG 0.592137 5_2:+55016153 None:intergenic
GGTTGTGGGGAAAATAAGAG+TGG 0.592804 5_2:-55016784 Msa0776650:CDS
TGACTCAGCAGCAGGATAGG+AGG 0.593992 5_2:-55017954 Msa0776650:CDS
GCATCTAACAACCATTTCCA+TGG 0.594327 5_2:+55014837 None:intergenic
CTACCAATAAAGCATCCCCT+TGG 0.594424 5_2:+55015695 None:intergenic
GAATGTAGCAACTCCAACCA+AGG 0.598101 5_2:-55014627 Msa0776650:CDS
GCCTATGATATATTGTTGGA+GGG 0.599388 5_2:-55014909 Msa0776650:CDS
GTGGGGAAAATAAGAGTGGA+AGG 0.600347 5_2:-55016780 Msa0776650:intron
GATTCTAAGAAGGCAGTCCA+TGG 0.600429 5_2:-55015664 Msa0776650:CDS
ACTTGCGGCTAAATGGGCCA+TGG 0.602220 5_2:-55014854 Msa0776650:CDS
AGCAGGATGTAAAGCTGGCG+CGG 0.602954 5_2:+55013869 None:intergenic
TTTGTGGTTACTCCAGCCCA+TGG 0.604020 5_2:+55012623 None:intergenic
AGTGCCTCTCAAGACAAAGA+AGG 0.604507 5_2:-55016805 Msa0776650:CDS
AGCCAACTGAAGGTAGTACA+AGG 0.604967 5_2:-55016842 Msa0776650:CDS
TTGGAATCCTGGCTTCACCA+TGG 0.605696 5_2:+55015647 None:intergenic
GCCGCAAAAGGCTATTCCCA+TGG 0.605764 5_2:-55010983 Msa0776650:three_prime_UTR
GGAGACTGATGAATTTGTGT+CGG 0.611838 5_2:-55013525 Msa0776650:CDS
CCTAAAGCCCTAAAACCTAG+TGG 0.614249 5_2:-55018267 Msa0776650:CDS
CATTTCTTATAGAAATACAA+AGG 0.614859 5_2:+55013438 None:intergenic
AGATGCTAGACCAAAATGAT+CGG 0.615442 5_2:+55013899 None:intergenic
GGTGATGTCGGTTATTCGGA+AGG 0.617182 5_2:-55018003 Msa0776650:CDS
ATCTTCATAGCAATATGTCG+TGG 0.620851 5_2:-55011667 Msa0776650:CDS
GTTTCCACTCCCGAAACTTG+CGG 0.622116 5_2:-55014869 Msa0776650:CDS
GGCTGGTAAAGACCTCATGA+AGG 0.622315 5_2:+55011692 None:intergenic
CGGTTATTCGGAAGGATCCG+TGG 0.624271 5_2:-55017995 Msa0776650:CDS
GAGGAAACGAGAGAAGCAGA+TGG 0.624705 5_2:-55011778 Msa0776650:CDS
CTTCATCTCCAACCTTCATG+AGG 0.625205 5_2:-55011704 Msa0776650:CDS
GAAGTGAGAGAAGTCTGACT+AGG 0.628633 5_2:-55014556 Msa0776650:CDS
CGAGGTATAAAGCCAACTGA+AGG 0.628927 5_2:-55016852 Msa0776650:CDS
CAAGAAACAACCTCTACACA+GGG 0.629450 5_2:-55017574 Msa0776650:CDS
TCAGTTGGCTTTATACCTCG+AGG 0.631132 5_2:+55016855 None:intergenic
AATTGCACAATGTTATGATG+AGG 0.632254 5_2:-55018322 Msa0776650:CDS
TGTGGCTGTGGACTTGATGG+TGG 0.632595 5_2:+55013022 None:intergenic
TCACCATCAACAAATATAGG+AGG 0.635308 5_2:+55018027 None:intergenic
GAGAAGTCTGACTAGGCAAG+AGG 0.636214 5_2:-55014549 Msa0776650:intron
GTATCTGGTTCTCAGTAACA+CGG 0.636684 5_2:+55011970 None:intergenic
TTATTGAGATATTGCAAGTG+TGG 0.638514 5_2:+55017529 None:intergenic
ATACAAAGAAGAAAACTGAA+GGG 0.639387 5_2:-55016530 Msa0776650:CDS
CAGTTTCCCATTGAGCCAAG+GGG 0.639439 5_2:-55015710 Msa0776650:CDS
CAATCTCTTACCAATAAGAG+TGG 0.645216 5_2:-55010877 Msa0776650:three_prime_UTR
CGAGCTTCAATCACTGAGCG+AGG 0.647220 5_2:+55011211 None:intergenic
TGATGTCCTACATTGTAGAG+TGG 0.648648 5_2:-55012074 Msa0776650:CDS
TGTTTCAGTTCTGTGCAGGG+AGG 0.649450 5_2:-55012836 Msa0776650:intron
GTGAATTGTGATGATGGAGG+AGG 0.651967 5_2:-55017910 Msa0776650:CDS
GAGTTCTTGTTGCAACCTCG+AGG 0.652321 5_2:-55016870 Msa0776650:CDS
TATTCTTGAACACCATCAAG+AGG 0.652692 5_2:-55012102 Msa0776650:CDS
ATTGGAAGTACAATGACAAG+TGG 0.653819 5_2:-55015430 Msa0776650:CDS
CAGAAGAAAATGACTCCATG+TGG 0.655141 5_2:-55018138 Msa0776650:CDS
TTCATCGACTTGATTCGCCA+CGG 0.655644 5_2:+55017978 None:intergenic
AATTGGTACTGCTGGAAGAG+GGG 0.656682 5_2:-55018109 Msa0776650:CDS
ACATGTGAATGAGCTTCTAG+TGG 0.657596 5_2:-55013002 Msa0776650:CDS
TCAAGACAAAGAAGGTTGTG+GGG 0.665374 5_2:-55016797 Msa0776650:CDS
GGACAGCATTACCATCTCAA+CGG 0.666424 5_2:-55013480 Msa0776650:CDS
GTACCAATTTCACTTCCACA+TGG 0.670567 5_2:+55018123 None:intergenic
ACTAGAAGCTCATTCACATG+TGG 0.678399 5_2:+55013004 None:intergenic
TCTGTGAATTGTGATGATGG+AGG 0.678617 5_2:-55017913 Msa0776650:CDS
GCTTCAATCACTGAGCGAGG+AGG 0.678724 5_2:+55011214 None:intergenic
TTCAAGGTAATAAGAGCACA+CGG 0.684888 5_2:-55011816 Msa0776650:CDS
GATCGTTGAATCCGAAAGCG+AGG 0.685240 5_2:+55018457 None:intergenic
TGCAGAGTGACAGAATTCGG+TGG 0.714678 5_2:-55015504 Msa0776650:intron
ATGGGCAAGAGGCTGTACTG+AGG 0.720091 5_2:-55017034 Msa0776650:CDS
TGCACTCCAATGGATCAACA+AGG 0.722010 5_2:-55018834 Msa0776650:intron
CCGAAAGCGAGGTTACTACG+AGG 0.776363 5_2:+55018468 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAATTTATAACTATA+AGG + chr5_2:55012901-55012920 None:intergenic 10.0%
!! AAAAATTACTAATGTATTTA+TGG - chr5_2:55013012-55013031 Msa0776650:CDS 10.0%
!!! AGCTTTTAATTTTTTTAATT+AGG - chr5_2:55013338-55013357 Msa0776650:intron 10.0%
!!! GCTTTTAATTTTTTTAATTA+GGG - chr5_2:55013339-55013358 Msa0776650:intron 10.0%
!!! AAAAGAATGAATAATTTTAT+TGG + chr5_2:55015431-55015450 None:intergenic 10.0%
!! GTAATTGAGTAATAAATAAA+AGG + chr5_2:55010886-55010905 None:intergenic 15.0%
!!! AAAGAAGAATTGAATTTTAA+AGG + chr5_2:55011160-55011179 None:intergenic 15.0%
!!! TCATTTTCTTAAATTACTAT+CGG + chr5_2:55011907-55011926 None:intergenic 15.0%
!! TAAGAAAATGAATTTCAAAA+AGG + chr5_2:55012027-55012046 None:intergenic 15.0%
!!! TTTGAAATTCATTTTCTTAA+CGG - chr5_2:55012028-55012047 Msa0776650:CDS 15.0%
!! CATAAAAAAAAAAAAAAGAG+AGG + chr5_2:55012512-55012531 None:intergenic 15.0%
!!! CTCTCTTTTTTTTTTTTTTA+TGG - chr5_2:55012510-55012529 Msa0776650:intron 15.0%
!! AGATGATTATTACATAAATT+TGG + chr5_2:55014117-55014136 None:intergenic 15.0%
!! AAATTTATGTAATAATCATC+TGG - chr5_2:55014116-55014135 Msa0776650:intron 15.0%
!! AATATTTGTATTCATTAGTT+AGG - chr5_2:55015238-55015257 Msa0776650:intron 15.0%
!! TTATATCTGATAAAAACAAA+TGG - chr5_2:55015302-55015321 Msa0776650:intron 15.0%
!! TAATATGTATTAAGCAAAAA+GGG + chr5_2:55016489-55016508 None:intergenic 15.0%
!! TTAATATGTATTAAGCAAAA+AGG + chr5_2:55016490-55016509 None:intergenic 15.0%
!!! ATTTTGTTCTGTAAAAAATT+TGG + chr5_2:55018568-55018587 None:intergenic 15.0%
!!! TTTAAAGTCACATAAATGAT+TGG + chr5_2:55012333-55012352 None:intergenic 20.0%
!!! TCTTATTTCTCTAATTTCAT+AGG - chr5_2:55012753-55012772 Msa0776650:CDS 20.0%
!!! TTGAATATTTCTGTACAAAT+TGG - chr5_2:55012931-55012950 Msa0776650:intron 20.0%
!! TTATCATTAAGGTAAGAAAT+TGG + chr5_2:55014027-55014046 None:intergenic 20.0%
!! GATTATTACATAAATTTGGA+TGG + chr5_2:55014113-55014132 None:intergenic 20.0%
!! TACATTAGTTCAATAAATCT+TGG - chr5_2:55014284-55014303 Msa0776650:intron 20.0%
!! AAGAGAAAAAAAAAGTTACA+CGG - chr5_2:55014373-55014392 Msa0776650:intron 20.0%
!! AAAATTGTTCATTAAGAACT+AGG - chr5_2:55014426-55014445 Msa0776650:intron 20.0%
!!! TTATTATTTTTGCCTTGTTA+GGG + chr5_2:55014909-55014928 None:intergenic 20.0%
!! TATTCATTAGTTAGGATATA+AGG - chr5_2:55015246-55015265 Msa0776650:intron 20.0%
!!! GTTTTTTTTAATTGTGTCAT+GGG + chr5_2:55015498-55015517 None:intergenic 20.0%
!!! TGTTTTTTTTAATTGTGTCA+TGG + chr5_2:55015499-55015518 None:intergenic 20.0%
!! TTACTGTTTGTATTATTTGT+TGG - chr5_2:55015559-55015578 Msa0776650:intron 20.0%
!!! GTTTTGGTTTCTAAATAAAA+TGG - chr5_2:55016056-55016075 Msa0776650:intron 20.0%
!! CATTTCTTATAGAAATACAA+AGG + chr5_2:55016217-55016236 None:intergenic 20.0%
!! TTCTATAAGAAATGAAATTC+AGG - chr5_2:55016223-55016242 Msa0776650:CDS 20.0%
!!! AAATTTAGTTTTTCAACACT+AGG - chr5_2:55016367-55016386 Msa0776650:intron 20.0%
!!! AATTTAGTTTTTCAACACTA+GGG - chr5_2:55016368-55016387 Msa0776650:intron 20.0%
!! AATATGTATTAAGCAAAAAG+GGG + chr5_2:55016488-55016507 None:intergenic 20.0%
!! AAGACATTATACTAACTAAA+GGG + chr5_2:55017201-55017220 None:intergenic 20.0%
!! AAAGACATTATACTAACTAA+AGG + chr5_2:55017202-55017221 None:intergenic 20.0%
!!! ATTGTTTTGAAATTTCTAGA+AGG - chr5_2:55018158-55018177 Msa0776650:CDS 20.0%
!!! TTGTTTTGAAATTTCTAGAA+GGG - chr5_2:55018159-55018178 Msa0776650:CDS 20.0%
!! TATATGTAGAAATAAGTAGA+TGG + chr5_2:55018504-55018523 None:intergenic 20.0%
! AAGGAAAAAATGTTTACAGA+AGG - chr5_2:55010783-55010802 Msa0776650:three_prime_UTR 25.0%
! AAAAATGTTTACAGAAGGAT+TGG - chr5_2:55010788-55010807 Msa0776650:three_prime_UTR 25.0%
!! AGAAGAAAGAAGTTTAAGTT+AGG + chr5_2:55010850-55010869 None:intergenic 25.0%
!!! CTTTTTCGATTAATGAAACA+GGG - chr5_2:55010995-55011014 Msa0776650:three_prime_UTR 25.0%
! AGTAAGGTTATTATTGGAAA+GGG + chr5_2:55011116-55011135 None:intergenic 25.0%
! TTTAGGAGTAAGGTTATTAT+TGG + chr5_2:55011122-55011141 None:intergenic 25.0%
!!! AATTTTAAAGGAGGTAAAGA+TGG + chr5_2:55011148-55011167 None:intergenic 25.0%
!!! GAAGAATTGAATTTTAAAGG+AGG + chr5_2:55011157-55011176 None:intergenic 25.0%
!!! CTTCTAGAATTAACAGTATT+AGG + chr5_2:55011457-55011476 None:intergenic 25.0%
!! AATTCTAGAAGATTTACTGA+TGG - chr5_2:55011466-55011485 Msa0776650:CDS 25.0%
!! TTTGAATGATTCTGTTGATT+TGG - chr5_2:55011588-55011607 Msa0776650:intron 25.0%
! ACATAATTCAATGTAATCGT+CGG - chr5_2:55011926-55011945 Msa0776650:intron 25.0%
! TATATATAGCAGTTAGTACA+TGG - chr5_2:55012180-55012199 Msa0776650:intron 25.0%
!!! GTTTAATTTTCATGCACTTT+TGG - chr5_2:55012274-55012293 Msa0776650:CDS 25.0%
!! GTTTTACAAAAACACCTATT+TGG - chr5_2:55012704-55012723 Msa0776650:intron 25.0%
! AGAAATAAGAGAAATGATTG+AGG + chr5_2:55012743-55012762 None:intergenic 25.0%
! TGGTTGTATTTGATATTGTT+TGG - chr5_2:55013032-55013051 Msa0776650:CDS 25.0%
! TATACAAAGAAGAAAACTGA+AGG - chr5_2:55013121-55013140 Msa0776650:intron 25.0%
! ATACAAAGAAGAAAACTGAA+GGG - chr5_2:55013122-55013141 Msa0776650:intron 25.0%
! CCTTTAACTCATTCATATAT+AGG + chr5_2:55013380-55013399 None:intergenic 25.0%
! CCTATATATGAATGAGTTAA+AGG - chr5_2:55013377-55013396 Msa0776650:CDS 25.0%
!! TATATGCTTTTACTACTTGA+TGG - chr5_2:55013689-55013708 Msa0776650:intron 25.0%
! ATCTTAAGAGATCTTATAAC+TGG - chr5_2:55013909-55013928 Msa0776650:CDS 25.0%
! ATAAATTTGGATGGTGTAAA+GGG + chr5_2:55014104-55014123 None:intergenic 25.0%
! TAAAATCAGGTTATCAGTTT+AGG - chr5_2:55014518-55014537 Msa0776650:intron 25.0%
!!! TATTATTTTTGCCTTGTTAG+GGG + chr5_2:55014908-55014927 None:intergenic 25.0%
!!! CTTATTATTTTTGCCTTGTT+AGG + chr5_2:55014910-55014929 None:intergenic 25.0%
! TTCTTGTAGATATCTATTAC+AGG - chr5_2:55014998-55015017 Msa0776650:intron 25.0%
! TATCTGATAAAAACAAATGG+AGG - chr5_2:55015305-55015324 Msa0776650:intron 25.0%
!! ATTTTTACCTTGAGTTACTT+TGG - chr5_2:55015587-55015606 Msa0776650:intron 25.0%
!!! TTTTTACCTTGAGTTACTTT+GGG - chr5_2:55015588-55015607 Msa0776650:intron 25.0%
!!! CAAAATGAGACTTTTTGTTT+TGG - chr5_2:55016040-55016059 Msa0776650:intron 25.0%
!!! TACAAAGGTTTTTTATCTTC+AGG + chr5_2:55016202-55016221 None:intergenic 25.0%
!!! ATTTAGTTTTTCAACACTAG+GGG - chr5_2:55016369-55016388 Msa0776650:intron 25.0%
! ATATGTATTAAGCAAAAAGG+GGG + chr5_2:55016487-55016506 None:intergenic 25.0%
!! AATTTTCAGTTCAATTGACT+TGG - chr5_2:55016539-55016558 Msa0776650:CDS 25.0%
! GAAATGATATTGTAATCTTG+TGG + chr5_2:55016777-55016796 None:intergenic 25.0%
! GTAATTGTGAAACAAATTTC+TGG + chr5_2:55016850-55016869 None:intergenic 25.0%
! TTTGTTTCACAATTACATCA+TGG - chr5_2:55016854-55016873 Msa0776650:CDS 25.0%
!! ACTTACATTTTCCAAATACA+AGG + chr5_2:55017150-55017169 None:intergenic 25.0%
!!! TTGCAAATAAGTTTTGTATC+TGG + chr5_2:55017700-55017719 None:intergenic 25.0%
! ACTTATTTGCAAGCAATAAT+AGG - chr5_2:55017708-55017727 Msa0776650:intron 25.0%
! CTTATTTGCAAGCAATAATA+GGG - chr5_2:55017709-55017728 Msa0776650:intron 25.0%
! TACTAGTTGTATATTGTAGT+TGG + chr5_2:55018039-55018058 None:intergenic 25.0%
! AAAACAATCTATCACATTAG+AGG + chr5_2:55018146-55018165 None:intergenic 25.0%
! GAAAATAGAATATGGTACAA+TGG - chr5_2:55018188-55018207 Msa0776650:CDS 25.0%
! ATGTTTCACTTTGTAGATAT+TGG - chr5_2:55018350-55018369 Msa0776650:CDS 25.0%
! TAATAGAATCTCTTTCTTGT+TGG + chr5_2:55018701-55018720 None:intergenic 25.0%
! ATTCCTTTACAAAAGTGATA+GGG + chr5_2:55018803-55018822 None:intergenic 25.0%
! AGAAAGAAGTTTAAGTTAGG+TGG + chr5_2:55010847-55010866 None:intergenic 30.0%
AGGAAAGTTTGAGTATAAAC+TGG + chr5_2:55010977-55010996 None:intergenic 30.0%
CCTGTTTCATTAATCGAAAA+AGG + chr5_2:55010997-55011016 None:intergenic 30.0%
!!! CCTTTTTCGATTAATGAAAC+AGG - chr5_2:55010994-55011013 Msa0776650:three_prime_UTR 30.0%
GAGTAAGGTTATTATTGGAA+AGG + chr5_2:55011117-55011136 None:intergenic 30.0%
TCATCATAACATTGTGCAAT+TGG + chr5_2:55011331-55011350 None:intergenic 30.0%
AATTGCACAATGTTATGATG+AGG - chr5_2:55011330-55011349 Msa0776650:intron 30.0%
TATGATGAGGAACAGTTATT+TGG - chr5_2:55011343-55011362 Msa0776650:intron 30.0%
! CAGTTATTTGGATTTGGTAA+TGG - chr5_2:55011355-55011374 Msa0776650:intron 30.0%
! CAAAATTCCACTAGGTTTTA+GGG + chr5_2:55011395-55011414 None:intergenic 30.0%
! TCAAAATTCCACTAGGTTTT+AGG + chr5_2:55011396-55011415 None:intergenic 30.0%
! TAAAACCTAGTGGAATTTTG+AGG - chr5_2:55011395-55011414 Msa0776650:intron 30.0%
GTAACACAAAGCAACAAAAA+AGG + chr5_2:55011839-55011858 None:intergenic 30.0%
CTGTAAATTTCAACATCAGA+AGG + chr5_2:55012057-55012076 None:intergenic 30.0%
TTATTGAGATATTGCAAGTG+TGG + chr5_2:55012126-55012145 None:intergenic 30.0%
ACTTGCAATATCTCAATAAC+AGG - chr5_2:55012127-55012146 Msa0776650:intron 30.0%
GATCAATGTATAAGCAAGTT+GGG - chr5_2:55013162-55013181 Msa0776650:intron 30.0%
AAATGAATCAGAGTCATGTT+CGG - chr5_2:55013463-55013482 Msa0776650:CDS 30.0%
! TCTTATATGTTTCTAACAGC+AGG + chr5_2:55013598-55013617 None:intergenic 30.0%
! ATTCTTATGTTTCTAACAGC+AGG + chr5_2:55013734-55013753 None:intergenic 30.0%
TTTAGACTATTGTCGAAGAA+AGG - chr5_2:55013781-55013800 Msa0776650:intron 30.0%
!! TTGCTTTTCAACTGTTAAGA+AGG + chr5_2:55013829-55013848 None:intergenic 30.0%
CACATACAGGATTATCATTA+AGG + chr5_2:55014038-55014057 None:intergenic 30.0%
GGAATGTCTATGAACAAATA+TGG + chr5_2:55014073-55014092 None:intergenic 30.0%
CATAAATTTGGATGGTGTAA+AGG + chr5_2:55014105-55014124 None:intergenic 30.0%
! CATGATGATAATGAATGTGT+TGG - chr5_2:55014183-55014202 Msa0776650:intron 30.0%
TGGTGACAACAATCATATAA+AGG - chr5_2:55014242-55014261 Msa0776650:intron 30.0%
AAAAAAGTTACACGGTATCA+AGG - chr5_2:55014381-55014400 Msa0776650:intron 30.0%
!! ATTTCTTTACCCTATTTCTG+AGG - chr5_2:55014454-55014473 Msa0776650:intron 30.0%
!! TTTCTTTACCCTATTTCTGA+GGG - chr5_2:55014455-55014474 Msa0776650:intron 30.0%
AACATTTACCCTCAGAAATA+GGG + chr5_2:55014466-55014485 None:intergenic 30.0%
CATATCCACTACTTAAAATC+AGG - chr5_2:55014505-55014524 Msa0776650:intron 30.0%
!! GATAACCTGATTTTAAGTAG+TGG + chr5_2:55014513-55014532 None:intergenic 30.0%
!! TTCCTATGAGTAGTTTTACT+TGG - chr5_2:55014600-55014619 Msa0776650:CDS 30.0%
!! TCCTATGAGTAGTTTTACTT+GGG - chr5_2:55014601-55014620 Msa0776650:CDS 30.0%
TCAAGCCTATGATATATTGT+TGG - chr5_2:55014739-55014758 Msa0776650:intron 30.0%
CCTCAATTTAGCATATGAAT+CGG + chr5_2:55014864-55014883 None:intergenic 30.0%
GAGAAATCCTTTGTAGATAA+GGG - chr5_2:55015360-55015379 Msa0776650:intron 30.0%
AGAAATCCTTTGTAGATAAG+GGG - chr5_2:55015361-55015380 Msa0776650:intron 30.0%
TTGGATGAATGAGAAAGAAT+AGG + chr5_2:55015412-55015431 None:intergenic 30.0%
!!! TCTCATTTTGTTATTGTTGC+AGG + chr5_2:55016030-55016049 None:intergenic 30.0%
AACAACCATAATACAATCCA+TGG - chr5_2:55016260-55016279 Msa0776650:intron 30.0%
! CATATTTTTCCCAGGTATTT+TGG - chr5_2:55016287-55016306 Msa0776650:intron 30.0%
AAAATTCAGGCTGTATTTAG+TGG + chr5_2:55016749-55016768 None:intergenic 30.0%
! TCTTGTGGAATCTAAAATTC+AGG + chr5_2:55016762-55016781 None:intergenic 30.0%
TTCACAATTACATCATGGTT+TGG - chr5_2:55016859-55016878 Msa0776650:CDS 30.0%
TGATCTTTGTAAAGCAGAAA+AGG - chr5_2:55016908-55016927 Msa0776650:intron 30.0%
TCATTTGTTTGTAAGAAGGA+GGG + chr5_2:55017001-55017020 None:intergenic 30.0%
!! TGTGTCATTTGTTTGTAAGA+AGG + chr5_2:55017005-55017024 None:intergenic 30.0%
TTCTTACAAACAAATGACAC+AGG - chr5_2:55017004-55017023 Msa0776650:CDS 30.0%
! TCATACATTTTCTCAGCAAA+TGG + chr5_2:55017068-55017087 None:intergenic 30.0%
! TATTGATTACCACTTCATAC+TGG + chr5_2:55017112-55017131 None:intergenic 30.0%
ATGAAGTGGTAATCAATAGA+TGG - chr5_2:55017114-55017133 Msa0776650:intron 30.0%
! AAATGCACATAGAACGTTTT+AGG + chr5_2:55017173-55017192 None:intergenic 30.0%
! GTATATTTCCCTTTTCATTC+TGG - chr5_2:55017261-55017280 Msa0776650:intron 30.0%
TTTGGTATGCTATCTTTCAA+AGG + chr5_2:55017356-55017375 None:intergenic 30.0%
! AACAATTTGTTTCATCCAGT+TGG - chr5_2:55017524-55017543 Msa0776650:intron 30.0%
! ACAATTTGTTTCATCCAGTT+GGG - chr5_2:55017525-55017544 Msa0776650:intron 30.0%
ATATAGAGCCAACATGAATA+GGG + chr5_2:55017771-55017790 None:intergenic 30.0%
GACATATTGCTATGAAGATT+TGG + chr5_2:55017984-55018003 None:intergenic 30.0%
!!! TTTTGAAATTTCTAGAAGGG+AGG - chr5_2:55018162-55018181 Msa0776650:CDS 30.0%
GGAGGAAAGAAAATAGAATA+TGG - chr5_2:55018180-55018199 Msa0776650:CDS 30.0%
ACACAAGAAAAAGACAACAT+AGG + chr5_2:55018257-55018276 None:intergenic 30.0%
CATTCCTTTACAAAAGTGAT+AGG + chr5_2:55018804-55018823 None:intergenic 30.0%
!!! GGTGATTTTTTCTCAGTTAG+AGG + chr5_2:55011064-55011083 None:intergenic 35.0%
AAAAGTGGTGATCTAGGAAA+AGG + chr5_2:55011085-55011104 None:intergenic 35.0%
GTTATTATTGGAAAGGGTTG+TGG + chr5_2:55011110-55011129 None:intergenic 35.0%
AAGATGGAGATTTAGGAGTA+AGG + chr5_2:55011132-55011151 None:intergenic 35.0%
! ATCTTCTTCGTTTTCGTCAT+CGG + chr5_2:55011281-55011300 None:intergenic 35.0%
ACGAAAACGAAGAAGATGAA+AGG - chr5_2:55011284-55011303 Msa0776650:CDS 35.0%
CGAAAACGAAGAAGATGAAA+GGG - chr5_2:55011285-55011304 Msa0776650:CDS 35.0%
GAGGAACAGTTATTTGGATT+TGG - chr5_2:55011349-55011368 Msa0776650:intron 35.0%
AGATTTACTGATGGAGAGTT+AGG - chr5_2:55011475-55011494 Msa0776650:CDS 35.0%
TCACCATCAACAAATATAGG+AGG + chr5_2:55011628-55011647 None:intergenic 35.0%
CCTTCACCATCAACAAATAT+AGG + chr5_2:55011631-55011650 None:intergenic 35.0%
!! CCTATATTTGTTGATGGTGA+AGG - chr5_2:55011628-55011647 Msa0776650:intron 35.0%
GATTCTGTGAATTGTGATGA+TGG - chr5_2:55011736-55011755 Msa0776650:CDS 35.0%
TACCTTTCAGCAACAGTATT+AGG + chr5_2:55011796-55011815 None:intergenic 35.0%
!! ACTCATCTTTTAGAAACTCC+GGG + chr5_2:55012645-55012664 None:intergenic 35.0%
!! CACTCATCTTTTAGAAACTC+CGG + chr5_2:55012646-55012665 None:intergenic 35.0%
! GTTTCTAAAAGATGAGTGTC+TGG - chr5_2:55012648-55012667 Msa0776650:intron 35.0%
GACAATGAATGAAGCCAAAT+AGG + chr5_2:55012721-55012740 None:intergenic 35.0%
CTTGCTTATACATTGATCCT+CGG + chr5_2:55013160-55013179 None:intergenic 35.0%
GGATCAATGTATAAGCAAGT+TGG - chr5_2:55013161-55013180 Msa0776650:intron 35.0%
! AATGTATAAGCAAGTTGGGA+TGG - chr5_2:55013166-55013185 Msa0776650:intron 35.0%
!! CTGTATACCACTTTTCACAA+GGG + chr5_2:55013213-55013232 None:intergenic 35.0%
!! ACTGTATACCACTTTTCACA+AGG + chr5_2:55013214-55013233 None:intergenic 35.0%
AAGTGGTATACAGTCTATGA+AGG - chr5_2:55013220-55013239 Msa0776650:intron 35.0%
AGAAGGTTAGTGCATATTTG+AGG - chr5_2:55013265-55013284 Msa0776650:intron 35.0%
CTCAACTTATCAGCTATGAA+TGG + chr5_2:55013320-55013339 None:intergenic 35.0%
AGTTGGATCAAACAATGCAT+TGG + chr5_2:55013425-55013444 None:intergenic 35.0%
! AGAAGTCCAAGATTCTAAGA+AGG - chr5_2:55013978-55013997 Msa0776650:CDS 35.0%
AAGGTAAGAAATTGGAATCC+TGG + chr5_2:55014019-55014038 None:intergenic 35.0%
ATATGCAGAGTGACAGAATT+CGG - chr5_2:55014145-55014164 Msa0776650:intron 35.0%
! ATTGGAAGTACAATGACAAG+TGG - chr5_2:55014222-55014241 Msa0776650:intron 35.0%
ACGGTATCAAGGATTATAGA+TGG - chr5_2:55014392-55014411 Msa0776650:intron 35.0%
CAACATTTACCCTCAGAAAT+AGG + chr5_2:55014467-55014486 None:intergenic 35.0%
AACTAACAAGTCCTCTCTAT+CGG + chr5_2:55014571-55014590 None:intergenic 35.0%
ACCCAAGTAAAACTACTCAT+AGG + chr5_2:55014605-55014624 None:intergenic 35.0%
!! AGGATTATGTTGGTGGTTAT+TGG + chr5_2:55014633-55014652 None:intergenic 35.0%
AAAGCAGGAAAGGATTATGT+TGG + chr5_2:55014643-55014662 None:intergenic 35.0%
TCAAACTCAGAATGAAAAGC+AGG + chr5_2:55014658-55014677 None:intergenic 35.0%
AGCCTATGATATATTGTTGG+AGG - chr5_2:55014742-55014761 Msa0776650:intron 35.0%
GCCTATGATATATTGTTGGA+GGG - chr5_2:55014743-55014762 Msa0776650:intron 35.0%
ACCCTCCAACAATATATCAT+AGG + chr5_2:55014747-55014766 None:intergenic 35.0%
CCGATTCATATGCTAAATTG+AGG - chr5_2:55014861-55014880 Msa0776650:CDS 35.0%
TGAGGTAGTTGAATATCATC+TGG - chr5_2:55014879-55014898 Msa0776650:CDS 35.0%
ATATCTACAAGAAGACCACA+AGG + chr5_2:55014991-55015010 None:intergenic 35.0%
! GTTAGGATATAAGGACTAGT+TGG - chr5_2:55015255-55015274 Msa0776650:intron 35.0%
GGAGAAATCCTTTGTAGATA+AGG - chr5_2:55015359-55015378 Msa0776650:intron 35.0%
!! CTCACAGAGAAGTATACTTT+TGG - chr5_2:55015646-55015665 Msa0776650:CDS 35.0%
AAATGATCGGTTAAACCTGT+TGG + chr5_2:55015743-55015762 None:intergenic 35.0%
! ACAGGTTTAACCGATCATTT+TGG - chr5_2:55015743-55015762 Msa0776650:intron 35.0%
AGATGCTAGACCAAAATGAT+CGG + chr5_2:55015756-55015775 None:intergenic 35.0%
TATTCTACAGAACTATCTGC+AGG - chr5_2:55015856-55015875 Msa0776650:intron 35.0%
AATGTAACTGAGCCTTGAAA+AGG - chr5_2:55015923-55015942 Msa0776650:intron 35.0%
! GGTATCACTAAACCTTTTCA+AGG + chr5_2:55015938-55015957 None:intergenic 35.0%
ATGATCCAGAAGACTTTATG+AGG + chr5_2:55016006-55016025 None:intergenic 35.0%
AAGGTGTAGAAAACACATGA+TGG - chr5_2:55016106-55016125 Msa0776650:intron 35.0%
GAATTGTAGCCAAAATACCT+GGG + chr5_2:55016299-55016318 None:intergenic 35.0%
AGAATTGTAGCCAAAATACC+TGG + chr5_2:55016300-55016319 None:intergenic 35.0%
ATCTCGAGTCATGGAATATA+AGG - chr5_2:55016694-55016713 Msa0776650:intron 35.0%
GTCATTTGTTTGTAAGAAGG+AGG + chr5_2:55017002-55017021 None:intergenic 35.0%
CAACTTAATCCAGTATGAAG+TGG - chr5_2:55017100-55017119 Msa0776650:CDS 35.0%
!! TCCAAATACAAGGAGTATTG+AGG + chr5_2:55017140-55017159 None:intergenic 35.0%
! ATTTCCCTTTTCATTCTGGA+AGG - chr5_2:55017265-55017284 Msa0776650:intron 35.0%
CAGAGATAACTTACTTGGTT+AGG + chr5_2:55017440-55017459 None:intergenic 35.0%
TGTTCAAGAATATACCCAAC+TGG + chr5_2:55017542-55017561 None:intergenic 35.0%
TATTCTTGAACACCATCAAG+AGG - chr5_2:55017550-55017569 Msa0776650:CDS 35.0%
TGGAAGACATCCTAAATTCA+TGG - chr5_2:55017598-55017617 Msa0776650:intron 35.0%
GGAAGACATCCTAAATTCAT+GGG - chr5_2:55017599-55017618 Msa0776650:intron 35.0%
ATGGGAGATAAGAAGTTGTT+TGG - chr5_2:55017639-55017658 Msa0776650:intron 35.0%
TTGTTTGGAGAGCAAATGAA+TGG - chr5_2:55017654-55017673 Msa0776650:intron 35.0%
TATAGAGCCAACATGAATAG+GGG + chr5_2:55017770-55017789 None:intergenic 35.0%
GATATAGAGCCAACATGAAT+AGG + chr5_2:55017772-55017791 None:intergenic 35.0%
CCTTGAATCTGAACAATTTG+TGG + chr5_2:55017823-55017842 None:intergenic 35.0%
CCACAAATTGTTCAGATTCA+AGG - chr5_2:55017820-55017839 Msa0776650:intron 35.0%
! TTCAAGGTAATAAGAGCACA+CGG - chr5_2:55017836-55017855 Msa0776650:intron 35.0%
TATTGCTATGAAGATTTGGC+TGG + chr5_2:55017980-55017999 None:intergenic 35.0%
ATCTTCATAGCAATATGTCG+TGG - chr5_2:55017985-55018004 Msa0776650:CDS 35.0%
TCTCAGATGCAAAGATTAAG+AGG - chr5_2:55018387-55018406 Msa0776650:CDS 35.0%
!! AAAAGTGTTCTCGCTTGTAA+AGG - chr5_2:55018636-55018655 Msa0776650:CDS 35.0%
! AAAGTGTTCTCGCTTGTAAA+GGG - chr5_2:55018637-55018656 Msa0776650:CDS 35.0%
TCGCTTGTAAAGGGAAAATT+AGG - chr5_2:55018646-55018665 Msa0776650:intron 35.0%
CGCTTGTAAAGGGAAAATTA+GGG - chr5_2:55018647-55018666 Msa0776650:intron 35.0%
AATTTCCTTCACGAAGAGTA+TGG - chr5_2:55018737-55018756 Msa0776650:intron 35.0%
CACTCTTATTGGTAAGAGAT+TGG + chr5_2:55018777-55018796 None:intergenic 35.0%
CAATCTCTTACCAATAAGAG+TGG - chr5_2:55018775-55018794 Msa0776650:intron 35.0%
!! GTACCCTATCACTTTTGTAA+AGG - chr5_2:55018797-55018816 Msa0776650:intron 35.0%
TGGTTACCTTGTTGATCCAT+TGG + chr5_2:55010827-55010846 None:intergenic 40.0%
GGAGGTAAAGATGGAGATTT+AGG + chr5_2:55011139-55011158 None:intergenic 40.0%
!! ACCTAGTGGAATTTTGAGGA+AGG - chr5_2:55011399-55011418 Msa0776650:intron 40.0%
!! CCTAGTGGAATTTTGAGGAA+GGG - chr5_2:55011400-55011419 Msa0776650:intron 40.0%
!! TGGAATTTTGAGGAAGGGTT+TGG - chr5_2:55011405-55011424 Msa0776650:intron 40.0%
CAGAAGAAAATGACTCCATG+TGG - chr5_2:55011514-55011533 Msa0776650:intron 40.0%
ACTCCATGTGGAAGTGAAAT+TGG - chr5_2:55011526-55011545 Msa0776650:intron 40.0%
GTACCAATTTCACTTCCACA+TGG + chr5_2:55011532-55011551 None:intergenic 40.0%
AAATTGGTACTGCTGGAAGA+GGG - chr5_2:55011542-55011561 Msa0776650:intron 40.0%
!! ACAAATATAGGAGGAGCACT+TGG + chr5_2:55011619-55011638 None:intergenic 40.0%
! GCTCCTCCTATATTTGTTGA+TGG - chr5_2:55011622-55011641 Msa0776650:intron 40.0%
! TGAAGGTGATGTCGGTTATT+CGG - chr5_2:55011645-55011664 Msa0776650:CDS 40.0%
!! TCTGTGAATTGTGATGATGG+AGG - chr5_2:55011739-55011758 Msa0776650:CDS 40.0%
TGCCTAATACTGTTGCTGAA+AGG - chr5_2:55011791-55011810 Msa0776650:CDS 40.0%
!! GTGTTACTTTCCATGAAGCA+CGG - chr5_2:55011852-55011871 Msa0776650:intron 40.0%
ATGAAGCACGGACACAAAAT+CGG - chr5_2:55011864-55011883 Msa0776650:intron 40.0%
TTCAATGTAATCGTCGGTGT+CGG - chr5_2:55011932-55011951 Msa0776650:CDS 40.0%
TCAAGAAACAACCTCTACAC+AGG - chr5_2:55012077-55012096 Msa0776650:CDS 40.0%
CAAGAAACAACCTCTACACA+GGG - chr5_2:55012078-55012097 Msa0776650:CDS 40.0%
TTGAGATATTGCAAGTGTGG+AGG + chr5_2:55012123-55012142 None:intergenic 40.0%
GAAAACCTGCATCATAAGAG+TGG + chr5_2:55012394-55012413 None:intergenic 40.0%
!! CTCATCTTTTAGAAACTCCG+GGG + chr5_2:55012644-55012663 None:intergenic 40.0%
ACCAAATGAAACCTACCCAA+AGG + chr5_2:55012686-55012705 None:intergenic 40.0%
TTCCTTGTACTACCTTCAGT+TGG + chr5_2:55012815-55012834 None:intergenic 40.0%
ACAACCTTCTTTGTCTTGAG+AGG + chr5_2:55012854-55012873 None:intergenic 40.0%
TCTCAAGACAAAGAAGGTTG+TGG - chr5_2:55012853-55012872 Msa0776650:intron 40.0%
CTCAAGACAAAGAAGGTTGT+GGG - chr5_2:55012854-55012873 Msa0776650:intron 40.0%
TCAAGACAAAGAAGGTTGTG+GGG - chr5_2:55012855-55012874 Msa0776650:intron 40.0%
TACATATATGCGCACGTGTT+TGG + chr5_2:55012988-55013007 None:intergenic 40.0%
GTTTCATCCCTTGTGAAAAG+TGG - chr5_2:55013203-55013222 Msa0776650:intron 40.0%
GGTTAGTGCATATTTGAGGA+AGG - chr5_2:55013269-55013288 Msa0776650:intron 40.0%
CATGATAATCTCCACTTCCA+GGG + chr5_2:55013502-55013521 None:intergenic 40.0%
TCATGATAATCTCCACTTCC+AGG + chr5_2:55013503-55013522 None:intergenic 40.0%
ATGGTGTAAAGGGAAAGAAG+AGG + chr5_2:55014094-55014113 None:intergenic 40.0%
TTGTACTTCCAATTGAGAGC+TGG + chr5_2:55014215-55014234 None:intergenic 40.0%
! TCATCTTCCAAGTTGACAAC+TGG - chr5_2:55014347-55014366 Msa0776650:intron 40.0%
TCTTTGTCCAGTTGTCAACT+TGG + chr5_2:55014357-55014376 None:intergenic 40.0%
CTGAGGGTAAATGTTGTTGA+TGG - chr5_2:55014471-55014490 Msa0776650:intron 40.0%
! GGTAAATGTTGTTGATGGAG+AGG - chr5_2:55014476-55014495 Msa0776650:intron 40.0%
CTCAGAATGAAAAGCAGGAA+AGG + chr5_2:55014653-55014672 None:intergenic 40.0%
CTGCAGTGTATGCAAAAACA+GGG + chr5_2:55014699-55014718 None:intergenic 40.0%
TCTGCAGTGTATGCAAAAAC+AGG + chr5_2:55014700-55014719 None:intergenic 40.0%
GCATCTAACAACCATTTCCA+TGG + chr5_2:55014818-55014837 None:intergenic 40.0%
! GATGCATTTGCTGACTACTA+TGG - chr5_2:55014833-55014852 Msa0776650:CDS 40.0%
GTTACTTGATCCCCTAATGA+AGG - chr5_2:55015070-55015089 Msa0776650:intron 40.0%
TCTGTACATTGACGAATTCG+TGG - chr5_2:55015333-55015352 Msa0776650:intron 40.0%
ACATTGACGAATTCGTGGAT+AGG - chr5_2:55015338-55015357 Msa0776650:intron 40.0%
TGGTTTCCCCTTATCTACAA+AGG + chr5_2:55015370-55015389 None:intergenic 40.0%
TGTAGATAAGGGGAAACCAT+TGG - chr5_2:55015371-55015390 Msa0776650:intron 40.0%
GCAAATCCCAAAGTAACTCA+AGG + chr5_2:55015597-55015616 None:intergenic 40.0%
!! ATACCTTCTGCTGGTTTATG+AGG - chr5_2:55015953-55015972 Msa0776650:intron 40.0%
TACCTCCTCATAAAGTCTTC+TGG - chr5_2:55015998-55016017 Msa0776650:intron 40.0%
ATCCAGAAGACTTTATGAGG+AGG + chr5_2:55016003-55016022 None:intergenic 40.0%
GGAGACTGATGAATTTGTGT+CGG - chr5_2:55016127-55016146 Msa0776650:intron 40.0%
GAGACTGATGAATTTGTGTC+GGG - chr5_2:55016128-55016147 Msa0776650:intron 40.0%
TGCCTCAGAAAGTTACCAAA+TGG - chr5_2:55016151-55016170 Msa0776650:CDS 40.0%
! GTCCATTTGGTAACTTTCTG+AGG + chr5_2:55016156-55016175 None:intergenic 40.0%
! AGATGGTAATGCTGTCCATT+TGG + chr5_2:55016169-55016188 None:intergenic 40.0%
! GCTGACCATGGATTGTATTA+TGG + chr5_2:55016268-55016287 None:intergenic 40.0%
TGGGAAAAATATGCTGACCA+TGG + chr5_2:55016280-55016299 None:intergenic 40.0%
! ATGGTCAGCATATTTTTCCC+AGG - chr5_2:55016279-55016298 Msa0776650:intron 40.0%
ACACAGCTCTGTGCTATAAA+TGG + chr5_2:55016580-55016599 None:intergenic 40.0%
ATAGCACAGAGCTGTGTAAA+AGG - chr5_2:55016583-55016602 Msa0776650:intron 40.0%
TGAGAACTTTCCTTTCTGCA+TGG - chr5_2:55016607-55016626 Msa0776650:intron 40.0%
ACTAGAAGCTCATTCACATG+TGG + chr5_2:55016651-55016670 None:intergenic 40.0%
ACATGTGAATGAGCTTCTAG+TGG - chr5_2:55016650-55016669 Msa0776650:intron 40.0%
TTCATGTTTCAGTTCTGTGC+AGG - chr5_2:55016812-55016831 Msa0776650:CDS 40.0%
TCATGTTTCAGTTCTGTGCA+GGG - chr5_2:55016813-55016832 Msa0776650:CDS 40.0%
AACAAATGACACAGGTTCCA+TGG - chr5_2:55017012-55017031 Msa0776650:CDS 40.0%
ACAAATGACACAGGTTCCAT+GGG - chr5_2:55017013-55017032 Msa0776650:CDS 40.0%
TGGTGAAGTGGAATGATTTG+TGG + chr5_2:55017048-55017067 None:intergenic 40.0%
TTTCTCAGCAAATGGTGAAG+TGG + chr5_2:55017060-55017079 None:intergenic 40.0%
GCCTCAATACTCCTTGTATT+TGG - chr5_2:55017136-55017155 Msa0776650:intron 40.0%
ACAGCCTTCCAGAATGAAAA+GGG + chr5_2:55017272-55017291 None:intergenic 40.0%
AGGCTGTGGCAAATATTGAA+AGG - chr5_2:55017285-55017304 Msa0776650:intron 40.0%
GGCTGTGGCAAATATTGAAA+GGG - chr5_2:55017286-55017305 Msa0776650:intron 40.0%
ACTTGCAAGTGAAGTCTCTT+TGG + chr5_2:55017374-55017393 None:intergenic 40.0%
GCATGCAGAGATAACTTACT+TGG + chr5_2:55017445-55017464 None:intergenic 40.0%
GACATCAAGTATCCTCTTGA+TGG + chr5_2:55017565-55017584 None:intergenic 40.0%
TGATGTCCTACATTGTAGAG+TGG - chr5_2:55017578-55017597 Msa0776650:CDS 40.0%
TGTCTTCCACTCTACAATGT+AGG + chr5_2:55017587-55017606 None:intergenic 40.0%
AACTTCTTATCTCCCATGAC+AGG + chr5_2:55017636-55017655 None:intergenic 40.0%
!! GTATCTGGTTCTCAGTAACA+CGG + chr5_2:55017685-55017704 None:intergenic 40.0%
TAAGACTCCCCTATTCATGT+TGG - chr5_2:55017760-55017779 Msa0776650:intron 40.0%
! TAGCAATATGTCGTGGATTG+TGG - chr5_2:55017992-55018011 Msa0776650:CDS 40.0%
! AGCAATATGTCGTGGATTGT+GGG - chr5_2:55017993-55018012 Msa0776650:CDS 40.0%
TTCTTGTTGGCAAATGCCAT+GGG + chr5_2:55018688-55018707 None:intergenic 40.0%
TTTCTTGTTGGCAAATGCCA+TGG + chr5_2:55018689-55018708 None:intergenic 40.0%
! TGATAGGGTACCACTCTTAT+TGG + chr5_2:55018788-55018807 None:intergenic 40.0%
TGGATGAAACTGCACTCCAA+TGG - chr5_2:55010808-55010827 Msa0776650:three_prime_UTR 45.0%
TGCACTCCAATGGATCAACA+AGG - chr5_2:55010818-55010837 Msa0776650:three_prime_UTR 45.0%
CCAGATCGAATCACAATAGG+TGG + chr5_2:55010916-55010935 None:intergenic 45.0%
CCACCTATTGTGATTCGATC+TGG - chr5_2:55010913-55010932 Msa0776650:three_prime_UTR 45.0%
GAGCCAGATCGAATCACAAT+AGG + chr5_2:55010919-55010938 None:intergenic 45.0%
!!! CCACTAGGTTTTAGGGCTTT+AGG + chr5_2:55011388-55011407 None:intergenic 45.0%
CCTAAAGCCCTAAAACCTAG+TGG - chr5_2:55011385-55011404 Msa0776650:intron 45.0%
CCCTTCCTCAAAATTCCACT+AGG + chr5_2:55011403-55011422 None:intergenic 45.0%
GGAAGTGAAATTGGTACTGC+TGG - chr5_2:55011535-55011554 Msa0776650:intron 45.0%
GAAATTGGTACTGCTGGAAG+AGG - chr5_2:55011541-55011560 Msa0776650:intron 45.0%
AATTGGTACTGCTGGAAGAG+GGG - chr5_2:55011543-55011562 Msa0776650:intron 45.0%
!! GTTGATGGTGAAGGTGATGT+CGG - chr5_2:55011637-55011656 Msa0776650:intron 45.0%
!! TTCATCGACTTGATTCGCCA+CGG + chr5_2:55011677-55011696 None:intergenic 45.0%
AAATGACTCAGCAGCAGGAT+AGG - chr5_2:55011695-55011714 Msa0776650:CDS 45.0%
!! GTGAATTGTGATGATGGAGG+AGG - chr5_2:55011742-55011761 Msa0776650:CDS 45.0%
! GATTTTGTGTCCGTGCTTCA+TGG + chr5_2:55011865-55011884 None:intergenic 45.0%
TTCTTGCATTAGACGTGTCC+TGG + chr5_2:55011977-55011996 None:intergenic 45.0%
GAAGTGTGTGTGTGCTTCAT+AGG - chr5_2:55011994-55012013 Msa0776650:CDS 45.0%
TCTTTCTATGCCCTGTGTAG+AGG + chr5_2:55012091-55012110 None:intergenic 45.0%
TACACAGGGCATAGAAAGAC+AGG - chr5_2:55012092-55012111 Msa0776650:CDS 45.0%
AGATATTGCAAGTGTGGAGG+AGG + chr5_2:55012120-55012139 None:intergenic 45.0%
AGTTGCCACTCTTATGATGC+AGG - chr5_2:55012386-55012405 Msa0776650:intron 45.0%
GTAAGTGATAAGGGTTTGCC+AGG + chr5_2:55012569-55012588 None:intergenic 45.0%
GCCTTTGGGTAGGTTTCATT+TGG - chr5_2:55012682-55012701 Msa0776650:intron 45.0%
!! TCAGTTGGCTTTATACCTCG+AGG + chr5_2:55012800-55012819 None:intergenic 45.0%
CGAGGTATAAAGCCAACTGA+AGG - chr5_2:55012800-55012819 Msa0776650:CDS 45.0%
AGCCAACTGAAGGTAGTACA+AGG - chr5_2:55012810-55012829 Msa0776650:CDS 45.0%
AGTGCCTCTCAAGACAAAGA+AGG - chr5_2:55012847-55012866 Msa0776650:intron 45.0%
GGTTGTGGGGAAAATAAGAG+TGG - chr5_2:55012868-55012887 Msa0776650:intron 45.0%
GTGGGGAAAATAAGAGTGGA+AGG - chr5_2:55012872-55012891 Msa0776650:intron 45.0%
! TATGCGCACGTGTTTGGAAT+TGG + chr5_2:55012982-55013001 None:intergenic 45.0%
!! AAGGGCACATTTTCAAACCG+AGG - chr5_2:55013140-55013159 Msa0776650:intron 45.0%
TCACTCTCAGTGACAGAAGA+AGG - chr5_2:55013248-55013267 Msa0776650:intron 45.0%
CTTCTGTTGCACTCTTGAGT+TGG + chr5_2:55013442-55013461 None:intergenic 45.0%
! ATTTTTCTTCGCCCTGGAAG+TGG - chr5_2:55013488-55013507 Msa0776650:CDS 45.0%
TGTCGAAGAAAGGTTACACG+AGG - chr5_2:55013791-55013810 Msa0776650:intron 45.0%
GTCGAAGAAAGGTTACACGA+GGG - chr5_2:55013792-55013811 Msa0776650:intron 45.0%
TTCAGTTTCCCATTGAGCCA+AGG - chr5_2:55013940-55013959 Msa0776650:CDS 45.0%
TCAGTTTCCCATTGAGCCAA+GGG - chr5_2:55013941-55013960 Msa0776650:CDS 45.0%
! CTACCAATAAAGCATCCCCT+TGG + chr5_2:55013960-55013979 None:intergenic 45.0%
GGACTGCCTTCTTAGAATCT+TGG + chr5_2:55013987-55014006 None:intergenic 45.0%
! GATTCTAAGAAGGCAGTCCA+TGG - chr5_2:55013988-55014007 Msa0776650:CDS 45.0%
GCAGGAAAGGATTATGTTGG+TGG + chr5_2:55014640-55014659 None:intergenic 45.0%
TAGGCTTGAGTTTCCACAAC+AGG + chr5_2:55014728-55014747 None:intergenic 45.0%
TCATCTGGATTCCCCTAACA+AGG - chr5_2:55014894-55014913 Msa0776650:CDS 45.0%
TTGAACCTTCGCTTACCTTG+TGG - chr5_2:55014973-55014992 Msa0776650:intron 45.0%
GAATGTAGCAACTCCAACCA+AGG - chr5_2:55015025-55015044 Msa0776650:intron 45.0%
GTAACTCTTTCACAAGCTCC+AGG + chr5_2:55015055-55015074 None:intergenic 45.0%
! TCACTTCTGGCCTTCATTAG+GGG + chr5_2:55015083-55015102 None:intergenic 45.0%
! CTCACTTCTGGCCTTCATTA+GGG + chr5_2:55015084-55015103 None:intergenic 45.0%
! TCTCACTTCTGGCCTTCATT+AGG + chr5_2:55015085-55015104 None:intergenic 45.0%
AGTCAGACTTCTCTCACTTC+TGG + chr5_2:55015096-55015115 None:intergenic 45.0%
GAAGTGAGAGAAGTCTGACT+AGG - chr5_2:55015096-55015115 Msa0776650:intron 45.0%
CTTGATGAAAACTCGCCAAC+AGG - chr5_2:55015725-55015744 Msa0776650:intron 45.0%
TGTAGAGCAGGATGTAAAGC+TGG + chr5_2:55015791-55015810 None:intergenic 45.0%
CTACTGTAGACTTGTAGAGC+AGG + chr5_2:55015803-55015822 None:intergenic 45.0%
GGTTTAGTGATACCTTCTGC+TGG - chr5_2:55015944-55015963 Msa0776650:intron 45.0%
GAACCTCATAAACCAGCAGA+AGG + chr5_2:55015959-55015978 None:intergenic 45.0%
GACAGACTGCAGCAAGAAAA+AGG - chr5_2:55016087-55016106 Msa0776650:intron 45.0%
GGACAGCATTACCATCTCAA+CGG - chr5_2:55016172-55016191 Msa0776650:CDS 45.0%
GCTGTATTTAGTGGTGCAAG+AGG + chr5_2:55016740-55016759 None:intergenic 45.0%
CACAGCCTTCCAGAATGAAA+AGG + chr5_2:55017273-55017292 None:intergenic 45.0%
!! CTTTTCATTCTGGAAGGCTG+TGG - chr5_2:55017271-55017290 Msa0776650:intron 45.0%
GACAGGATGCCCATGAATTT+AGG + chr5_2:55017611-55017630 None:intergenic 45.0%
ACGGCTGAAAAAGATGCTTG+AGG - chr5_2:55017855-55017874 Msa0776650:intron 45.0%
GAGAAGCAGAAGTTCGTGAA+AGG - chr5_2:55017896-55017915 Msa0776650:CDS 45.0%
CTTCATCTCCAACCTTCATG+AGG - chr5_2:55017948-55017967 Msa0776650:CDS 45.0%
GGTAAAGACCTCATGAAGGT+TGG + chr5_2:55017959-55017978 None:intergenic 45.0%
AATGGATCTTGCTACGCTCT+TGG - chr5_2:55018206-55018225 Msa0776650:CDS 45.0%
ATGGATCTTGCTACGCTCTT+GGG - chr5_2:55018207-55018226 Msa0776650:CDS 45.0%
CTTTGCCATACTCTTCGTGA+AGG + chr5_2:55018745-55018764 None:intergenic 45.0%
!! TTATATATCTAAAAATAAAA+TGG - chr5_2:55016975-55016994 Msa0776650:intron 5.0%
! TTGTGATTCGATCTGGCTCG+AGG - chr5_2:55010920-55010939 Msa0776650:three_prime_UTR 50.0%
GTGGCGAAAAGTGGTGATCT+AGG + chr5_2:55011091-55011110 None:intergenic 50.0%
GAAAGGGTTGTGGCGAAAAG+TGG + chr5_2:55011100-55011119 None:intergenic 50.0%
CCTCGTAGTAACCTCGCTTT+CGG - chr5_2:55011184-55011203 Msa0776650:CDS 50.0%
GATCGTTGAATCCGAAAGCG+AGG + chr5_2:55011198-55011217 None:intergenic 50.0%
! GGTGATGTCGGTTATTCGGA+AGG - chr5_2:55011649-55011668 Msa0776650:CDS 50.0%
CGATGAAATGACTCAGCAGC+AGG - chr5_2:55011690-55011709 Msa0776650:CDS 50.0%
CACTAATGCATGTCTGCACC+AGG - chr5_2:55011956-55011975 Msa0776650:CDS 50.0%
CTTGCAGTAGTCAAGATGCC+TGG - chr5_2:55012548-55012567 Msa0776650:CDS 50.0%
! GCAGGCGTCGTAAGTGATAA+GGG + chr5_2:55012578-55012597 None:intergenic 50.0%
! TGCAGGCGTCGTAAGTGATA+AGG + chr5_2:55012579-55012598 None:intergenic 50.0%
TTGCAGGCATAGACGAATGC+AGG + chr5_2:55012596-55012615 None:intergenic 50.0%
TTCGTCTATGCCTGCAAGCA+TGG - chr5_2:55012599-55012618 Msa0776650:CDS 50.0%
TCGTCTATGCCTGCAAGCAT+GGG - chr5_2:55012600-55012619 Msa0776650:CDS 50.0%
! TGGCTCTTCGAAGTGCCTTT+GGG - chr5_2:55012668-55012687 Msa0776650:intron 50.0%
! TCTTCGAAGTGCCTTTGGGT+AGG - chr5_2:55012672-55012691 Msa0776650:intron 50.0%
GAGTTCTTGTTGCAACCTCG+AGG - chr5_2:55012782-55012801 Msa0776650:CDS 50.0%
AAGTTGGGATGGAGTACGTC+AGG - chr5_2:55013177-55013196 Msa0776650:intron 50.0%
! TCGGCAATTTTTCTTCGCCC+TGG - chr5_2:55013482-55013501 Msa0776650:CDS 50.0%
CAGTTTCCCATTGAGCCAAG+GGG - chr5_2:55013942-55013961 Msa0776650:CDS 50.0%
AAGCATCCCCTTGGCTCAAT+GGG + chr5_2:55013951-55013970 None:intergenic 50.0%
! AAAGCATCCCCTTGGCTCAA+TGG + chr5_2:55013952-55013971 None:intergenic 50.0%
GAGCCAAGGGGATGCTTTAT+TGG - chr5_2:55013954-55013973 Msa0776650:CDS 50.0%
TTGGAATCCTGGCTTCACCA+TGG + chr5_2:55014008-55014027 None:intergenic 50.0%
TGCAGAGTGACAGAATTCGG+TGG - chr5_2:55014148-55014167 Msa0776650:intron 50.0%
! AGAGTGACAGAATTCGGTGG+TGG - chr5_2:55014151-55014170 Msa0776650:intron 50.0%
! GAGTGACAGAATTCGGTGGT+GGG - chr5_2:55014152-55014171 Msa0776650:intron 50.0%
GGCAAGATCCAGCTCTCAAT+TGG - chr5_2:55014204-55014223 Msa0776650:intron 50.0%
TCCAGTTCGATCCGATAGAG+AGG - chr5_2:55014557-55014576 Msa0776650:CDS 50.0%
TCCTCTCTATCGGATCGAAC+TGG + chr5_2:55014561-55014580 None:intergenic 50.0%
GTTTCCACTCCCGAAACTTG+CGG - chr5_2:55014783-55014802 Msa0776650:intron 50.0%
TCCCGAAACTTGCGGCTAAA+TGG - chr5_2:55014791-55014810 Msa0776650:intron 50.0%
CCCATTTAGCCGCAAGTTTC+GGG + chr5_2:55014795-55014814 None:intergenic 50.0%
CCCGAAACTTGCGGCTAAAT+GGG - chr5_2:55014792-55014811 Msa0776650:CDS 50.0%
GCCCATTTAGCCGCAAGTTT+CGG + chr5_2:55014796-55014815 None:intergenic 50.0%
GGCTAAATGGGCCATGGAAA+TGG - chr5_2:55014804-55014823 Msa0776650:CDS 50.0%
GAAGACCACAAGGTAAGCGA+AGG + chr5_2:55014981-55015000 None:intergenic 50.0%
GAGAAGTCTGACTAGGCAAG+AGG - chr5_2:55015103-55015122 Msa0776650:intron 50.0%
GAGAGACATCTCTCAGCCAA+TGG + chr5_2:55015390-55015409 None:intergenic 50.0%
CTTCAGGTATGCCGTTGAGA+TGG + chr5_2:55016186-55016205 None:intergenic 50.0%
!! TTGATGGTGGCCATGCAGAA+AGG + chr5_2:55016620-55016639 None:intergenic 50.0%
ACATGTGGCTGTGGACTTGA+TGG + chr5_2:55016636-55016655 None:intergenic 50.0%
AGCTCATTCACATGTGGCTG+TGG + chr5_2:55016645-55016664 None:intergenic 50.0%
TTGAACGCGATCTCGAGTCA+TGG - chr5_2:55016685-55016704 Msa0776650:intron 50.0%
TGTTTCAGTTCTGTGCAGGG+AGG - chr5_2:55016816-55016835 Msa0776650:CDS 50.0%
TTTGTGGTTACTCCAGCCCA+TGG + chr5_2:55017032-55017051 None:intergenic 50.0%
GCATCCTGTCTACCTGTCAT+GGG - chr5_2:55017621-55017640 Msa0776650:intron 50.0%
ATCTCCCATGACAGGTAGAC+AGG + chr5_2:55017628-55017647 None:intergenic 50.0%
GAGGAAACGAGAGAAGCAGA+TGG - chr5_2:55017874-55017893 Msa0776650:CDS 50.0%
GGCTGGTAAAGACCTCATGA+AGG + chr5_2:55017963-55017982 None:intergenic 50.0%
! TCGTGGATTGTGGGACAGAA+TGG - chr5_2:55018002-55018021 Msa0776650:CDS 50.0%
! CGTGGATTGTGGGACAGAAT+GGG - chr5_2:55018003-55018022 Msa0776650:CDS 50.0%
ATTGTGGGACAGAATGGGAC+AGG - chr5_2:55018008-55018027 Msa0776650:CDS 50.0%
TGGATCTTGCTACGCTCTTG+GGG - chr5_2:55018208-55018227 Msa0776650:CDS 50.0%
GGGAAAATTAGGGCCGCAAA+AGG - chr5_2:55018657-55018676 Msa0776650:intron 50.0%
! GCCATGGGAATAGCCTTTTG+CGG + chr5_2:55018673-55018692 None:intergenic 50.0%
! CTCAGTTAGAGGAGAGCGTG+TGG + chr5_2:55011053-55011072 None:intergenic 55.0%
CCGAAAGCGAGGTTACTACG+AGG + chr5_2:55011187-55011206 None:intergenic 55.0%
GTACTGCTGGAAGAGGGGTT+CGG - chr5_2:55011548-55011567 Msa0776650:intron 55.0%
CGGTTATTCGGAAGGATCCG+TGG - chr5_2:55011657-55011676 Msa0776650:CDS 55.0%
TGACTCAGCAGCAGGATAGG+AGG - chr5_2:55011698-55011717 Msa0776650:CDS 55.0%
AGCAGCAGGATAGGAGGTCT+TGG - chr5_2:55011704-55011723 Msa0776650:CDS 55.0%
ATGGGCAAGAGGCTGTACTG+AGG - chr5_2:55012618-55012637 Msa0776650:CDS 55.0%
! CTGGCTCTTCGAAGTGCCTT+TGG - chr5_2:55012667-55012686 Msa0776650:intron 55.0%
! GCAGCAGAGAGAGCACATAC+AGG + chr5_2:55014051-55014070 None:intergenic 55.0%
! ACTGCAGAGTGCTCCTGTTG+TGG - chr5_2:55014712-55014731 Msa0776650:intron 55.0%
TTAGCCGCAAGTTTCGGGAG+TGG + chr5_2:55014790-55014809 None:intergenic 55.0%
ACTTGCGGCTAAATGGGCCA+TGG - chr5_2:55014798-55014817 Msa0776650:CDS 55.0%
AACTCCAACCAAGGACTGCC+TGG - chr5_2:55015034-55015053 Msa0776650:intron 55.0%
AGCAGGATGTAAAGCTGGCG+CGG + chr5_2:55015786-55015805 None:intergenic 55.0%
TGTGGCTGTGGACTTGATGG+TGG + chr5_2:55016633-55016652 None:intergenic 55.0%
ATGACACAGGTTCCATGGGC+TGG - chr5_2:55017017-55017036 Msa0776650:CDS 55.0%
GGCATCCTGTCTACCTGTCA+TGG - chr5_2:55017620-55017639 Msa0776650:intron 55.0%
GCTTCAATCACTGAGCGAGG+AGG + chr5_2:55018441-55018460 None:intergenic 55.0%
CGAGCTTCAATCACTGAGCG+AGG + chr5_2:55018444-55018463 None:intergenic 55.0%
GCCGCAAAAGGCTATTCCCA+TGG - chr5_2:55018669-55018688 Msa0776650:intron 55.0%
! TTCGATCTGGCTCGAGGTCG+AGG - chr5_2:55010926-55010945 Msa0776650:three_prime_UTR 60.0%
! TCGATCTGGCTCGAGGTCGA+GGG - chr5_2:55010927-55010946 Msa0776650:three_prime_UTR 60.0%
TCATCGGTCTCAGCAGCAGC+AGG + chr5_2:55011265-55011284 None:intergenic 60.0%
TGCCTGCAAGCATGGGCAAG+AGG - chr5_2:55012607-55012626 Msa0776650:CDS 60.0%
AGCCTCTTGCCCATGCTTGC+AGG + chr5_2:55012612-55012631 None:intergenic 60.0%
AAGAGGCTGTACTGAGGCCC+CGG - chr5_2:55012624-55012643 Msa0776650:CDS 60.0%
AGGCAGTCCATGGTGAAGCC+AGG - chr5_2:55013998-55014017 Msa0776650:CDS 60.0%
AGCTCCAGGCAGTCCTTGGT+TGG + chr5_2:55015041-55015060 None:intergenic 60.0%
CACAAGCTCCAGGCAGTCCT+TGG + chr5_2:55015045-55015064 None:intergenic 60.0%
! CGATCTGGCTCGAGGTCGAG+GGG - chr5_2:55010928-55010947 Msa0776650:three_prime_UTR 65.0%
GGTCTCAGCAGCAGCAGGAC+AGG + chr5_2:55011260-55011279 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 55010778 55018896 55010778 ID=Msa0776650;Name=Msa0776650
chr5_2 mRNA 55010778 55018896 55010778 ID=Msa0776650-mRNA-1;Parent=Msa0776650;Name=Msa0776650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=14|1|0.95|1|1|1|21|372|1194
chr5_2 exon 55010778 55011308 55010778 ID=Msa0776650-mRNA-1:exon:16336;Parent=Msa0776650-mRNA-1
chr5_2 exon 55011445 55011516 55011445 ID=Msa0776650-mRNA-1:exon:16335;Parent=Msa0776650-mRNA-1
chr5_2 exon 55011645 55011839 55011645 ID=Msa0776650-mRNA-1:exon:16334;Parent=Msa0776650-mRNA-1
chr5_2 exon 55011928 55012131 55011928 ID=Msa0776650-mRNA-1:exon:16333;Parent=Msa0776650-mRNA-1
chr5_2 exon 55012229 55012387 55012229 ID=Msa0776650-mRNA-1:exon:16332;Parent=Msa0776650-mRNA-1
chr5_2 exon 55012511 55012648 55012511 ID=Msa0776650-mRNA-1:exon:16331;Parent=Msa0776650-mRNA-1
chr5_2 exon 55012745 55012850 55012745 ID=Msa0776650-mRNA-1:exon:16330;Parent=Msa0776650-mRNA-1
chr5_2 exon 55012959 55013126 55012959 ID=Msa0776650-mRNA-1:exon:16329;Parent=Msa0776650-mRNA-1
chr5_2 exon 55013374 55013582 55013374 ID=Msa0776650-mRNA-1:exon:16328;Parent=Msa0776650-mRNA-1
chr5_2 exon 55013797 55014021 55013797 ID=Msa0776650-mRNA-1:exon:16327;Parent=Msa0776650-mRNA-1
chr5_2 exon 55014550 55014667 55014550 ID=Msa0776650-mRNA-1:exon:16326;Parent=Msa0776650-mRNA-1
chr5_2 exon 55014792 55014955 55014792 ID=Msa0776650-mRNA-1:exon:16325;Parent=Msa0776650-mRNA-1
chr5_2 exon 55015411 55015521 55015411 ID=Msa0776650-mRNA-1:exon:16324;Parent=Msa0776650-mRNA-1
chr5_2 exon 55015624 55015729 55015624 ID=Msa0776650-mRNA-1:exon:16323;Parent=Msa0776650-mRNA-1
chr5_2 exon 55016149 55016254 55016149 ID=Msa0776650-mRNA-1:exon:16322;Parent=Msa0776650-mRNA-1
chr5_2 exon 55016405 55016569 55016405 ID=Msa0776650-mRNA-1:exon:16321;Parent=Msa0776650-mRNA-1
chr5_2 exon 55016781 55016899 55016781 ID=Msa0776650-mRNA-1:exon:16320;Parent=Msa0776650-mRNA-1
chr5_2 exon 55016985 55017128 55016985 ID=Msa0776650-mRNA-1:exon:16319;Parent=Msa0776650-mRNA-1
chr5_2 exon 55017526 55017597 55017526 ID=Msa0776650-mRNA-1:exon:16318;Parent=Msa0776650-mRNA-1
chr5_2 exon 55017862 55018658 55017862 ID=Msa0776650-mRNA-1:exon:16317;Parent=Msa0776650-mRNA-1
chr5_2 exon 55018835 55018896 55018835 ID=Msa0776650-mRNA-1:exon:16316;Parent=Msa0776650-mRNA-1
chr5_2 five_prime_UTR 55018883 55018896 55018883 ID=Msa0776650-mRNA-1:five_prime_utr;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55018835 55018882 55018835 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55017862 55018658 55017862 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55017526 55017597 55017526 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55016985 55017128 55016985 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55016781 55016899 55016781 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55016405 55016569 55016405 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55016149 55016254 55016149 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55015624 55015729 55015624 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55015411 55015521 55015411 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55014792 55014955 55014792 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55014550 55014667 55014550 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55013797 55014021 55013797 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55013374 55013582 55013374 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55012959 55013126 55012959 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55012745 55012850 55012745 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55012511 55012648 55012511 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55012229 55012387 55012229 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55011928 55012131 55011928 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55011645 55011839 55011645 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55011445 55011516 55011445 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 CDS 55011150 55011308 55011150 ID=Msa0776650-mRNA-1:cds;Parent=Msa0776650-mRNA-1
chr5_2 three_prime_UTR 55010778 55011149 55010778 ID=Msa0776650-mRNA-1:three_prime_utr;Parent=Msa0776650-mRNA-1
Gene Sequence

>Msa0776650

ATGTTTACAGAAGGATTGGATGAAACTGCACTCCAATGGATCAACAAGGGATCACAACAACAAGTACACGTTGAAGAATGCACCACACGCTCTCCTCTAACTGAGAAAAAATCACCTTTTCCTAGATCACCACTTTTCGCCACAACCCTTTCCAATAATAACCTTACTCCTAAATCTCCATCTTTACCTCCTTTAAAATTCAATTCTTCTTTGCTTCCTCGTAGTAACCTCGCTTTCGGATTCAACGATCACGATAGTGTCACTGATGATGAGAGTGTTGATTCATTGTCCTGTCCTGCTGCTGCTGAGACCGATGACGAAAACGAAGAAGATGAAAGGGTATTTGACAATTTAGATACTCCAATTGCACAATGTTATGATGAGGAACAGTTATTTGGATTTGGTAATGGATTTAAGCCTAAAGCCCTAAAACCTAGTGGAATTTTGAGGAAGGGTTTGGTAAATGAAAATTTAACAATTCAAGTTCCTAATACTGTTAATTCTAGAAGATTTACTGATGGAGAGTTAGGTTTTAACAAATGTGTTCAGAAGAAAATGACTCCATGTGGAAGTGAAATTGGTACTGCTGGAAGAGGGGTTCGGTTTCAAAATACAACTAATTTGAATGATTCTGTTGATTTGGCTACACCAAGTGCTCCTCCTATATTTGTTGATGGTGAAGGTGATGTCGGTTATTCGGAAGGATCCGTGGCGAATCAAGTCGATGAAATGACTCAGCAGCAGGATAGGAGGTCTTGGCAATCTAGAGATTCTGTGAATTGTGATGATGGAGGAGGAATAAGTGAATGTTCAATTGAACAAATGCCTAATACTGTTGCTGAAAGTCAAGAAACAACCTCTACACAGGGCATAGAAAGACAGGCTCCTCCTCCACACTTGCAATATCTCAATAACAGCACTTGCAGTAGTCAAGATGCCTGGCAAACCCTTATCACTTACGACGCCTGCATTCGTCTATGCCTGCAAGCATGGGCAAGAGGCTGTACTGAGGCCCCGGAGTTTCTAAAAGATGAGTGTCTGGCTCTTCGAAGTGCCTTTGGGTTACATGAGTTCTTGTTGCAACCTCGAGGTATAAAGCCAACTGAAGGTAGTACAAGGAATTCAGAACAAACAGTGCCTCTCAAGACAAAGAAGGTTGTGGGGAAAATAAGAGTGGAAGTGAAGAAACTTCGTATTATACAAAGAAGAAAACTGAAGGGCACATTTTCAAACCGAGGATCAATGTATAAGCAAGTTGGGATGGAGTACGTCAGGCATGTTTCATCCCTTGTGAAAAGTGGTATACAGTCTATGAAGGCAGCATCACTCTCAGTGACAGAAGAAGAGCCAATGCATTGTTTGATCCAACTCAAGAGTGCAACAGAAGAAAATGAATCAGAGTCATGTTCGGCAATTTTTCTTCGCCCTGGAAGTGGAGATTATCATGATTTTTTCCCATTGAGCCAAGGGGATGCTTTATTGGTAGAAGTCCAAGATTCTAAGAAGGCAGTCCATGGTGAAGCCAGGATTCCAATTTCTTACCTTAATGATAATCCTAGTGACAGAATTCGGTGGTGGGAAATAAATCATGATGATAATGAATGTGTTGGCAAGATCCAGCTCTCAATTGGAAGTACAATGACAAGTGGTGACAACAATCATATAAAGAGTGCTCCTGTTGTGGAAACTCAAGCCTATGATATATTGTTGGAGGGTGCGATGCGTGCACAGCGTTTCCACTCCCGAAACTTGCGGCTAAATGGGCCATGGAAATGGTTGTTAGATGCATTTGCTGACTACTATGGAGTTTCCGATTCATATGCTAAATTGAGATATCTATTACAGGTCATGAATGTAGCAACTCCAACCAAGGACTGCCTGGAGCTTGTGAAAGAGTTACTTGATCCCCTAATGAAGGCCAGAAGTGAGAGAAGTCTGACTAGGCAAGAGAGAAGTATACTTTTGGATTGTGAAACACAAATTGAAAGACTACTAGCGACTGTTTTTGAGAATTACAAATCGCTTGATGAAAACTCGCCAACAGGTTTAACCGATCATTTTGGTCTAGCATCTCATTCAGCCGCGCCAGCTTTACATCCTGCTCTACAAGTCTACAGTAGTCTTCATGATATACTTTCTTCAGATGCTCAAACTATTCTACAGAACTATCTGCAGACTGCAGCAAGAAAAAGGTGTAGAAAACACATGATGGAGACTGATGAATTTGTGTCGGGTGCCTCAGAAAGTTACCAAATGGACAGCATTACCATCTCAACGGCATACCTGAAGATAAAAAACCTTTGTATTTCTATAAGAAATGAAATTCAGGCAGACATAAAGATCAACAACCATAATACAATCCATGGTCAGCATATTTTTCCCAGTTCAATTGACTTGGCAAACATCACAGCAGCCATTTATAGCACAGAGCTGTGTAAAAGGCTGAGAACTTTCCTTTCTGCATGGCCACCATCAAGTCCACAGCCACATGTGAATGAGCTTCTAGTGGCAACTGCAGACTTTGAACGCGATCTCGAGTCATGGAATATAAGTTCTGTGCAGGGAGGTGTAGACTCCAGAAATTTGTTTCACAATTACATCATGGTTTGGATACAAGATATGCAACTTATTTTGTTTGATCTTTGTAAAGCAGAAAAGGTTCCATGGGCTGGAGTAACCACAAATCATTCCACTTCACCATTTGCTGAGAAAATGTATGAGAACATTAAAGACAACTTAATCCAGTATGAAGTGGTAATCAATAGATGGCCTCAATACTCCTTGTATTTGGAAAATGCTGTGGCAAATATTGAAAGGGCAATTGTGAAATCGCTTGAAAAACAATACAGTGAGATCTTAACTCCTTTGAAAGATAGCATACCAAAGAGACTTCACTTGCAAGTTCAAAAGCTAGCAAGAAGACAATCAGCTACAGTTCAGTTGCTTCCTAACCAATTGGGTATATTCTTGAACACCATCAAGAGGATACTTGATGTCCTACATTGTAGAGTGGAAGACATCCTAAATTCATGGGCATCCTGTCTACCTGTCATGGGAGATAAGAAGTTGTTTGGAGAGCAAATGAATGGAATCACCGTGTTACTGAGAACCAGATACAAAACTTATTTGCAAGCAATAATAGGGAATCTTGTCAACAATATTCAAGGTAATAAGAGCACACGGCTGAAAAAGATGCTTGAGGAAACGAGAGAAGCAGATGGAGAAGCAGAAGTTCGTGAAAGGATGCAGTTGTTGAATTCACAACTCGCTGACTTCATCTCCAACCTTCATGAGGTCTTTACCAGCCAAATCTTCATAGCAATATGTCGTGGATTGTGGGACAGAATGGGACAGATTGTTTTGAAATTTCTAGAAGGGAGGAAAGAAAATAGAATATGGTACAATGGATCTTGCTACGCTCTTGGGATATTGGATGACACATTTGCTTCTCAGATGCAAAGATTAAGAGGAAATGCATTGCAAGAGAAAGATATTGAGCCTCCTCGCTCAGTGATTGAAGCTCGATCTATTCTTTGCAAAGACACAACAAATGCAGCTGATCCATCTACTTATTTCTACATATAG
Protein sequence

>Msa0776650

MFTEGLDETALQWINKGSQQQVHVEECTTRSPLTEKKSPFPRSPLFATTLSNNNLTPKSPSLPPLKFNSSLLPRSNLAFGFNDHDSVTDDESVDSLSCPAAAETDDENEEDERVFDNLDTPIAQCYDEEQLFGFGNGFKPKALKPSGILRKGLVNENLTIQVPNTVNSRRFTDGELGFNKCVQKKMTPCGSEIGTAGRGVRFQNTTNLNDSVDLATPSAPPIFVDGEGDVGYSEGSVANQVDEMTQQQDRRSWQSRDSVNCDDGGGISECSIEQMPNTVAESQETTSTQGIERQAPPPHLQYLNNSTCSSQDAWQTLITYDACIRLCLQAWARGCTEAPEFLKDECLALRSAFGLHEFLLQPRGIKPTEGSTRNSEQTVPLKTKKVVGKIRVEVKKLRIIQRRKLKGTFSNRGSMYKQVGMEYVRHVSSLVKSGIQSMKAASLSVTEEEPMHCLIQLKSATEENESESCSAIFLRPGSGDYHDFFPLSQGDALLVEVQDSKKAVHGEARIPISYLNDNPSDRIRWWEINHDDNECVGKIQLSIGSTMTSGDNNHIKSAPVVETQAYDILLEGAMRAQRFHSRNLRLNGPWKWLLDAFADYYGVSDSYAKLRYLLQVMNVATPTKDCLELVKELLDPLMKARSERSLTRQERSILLDCETQIERLLATVFENYKSLDENSPTGLTDHFGLASHSAAPALHPALQVYSSLHDILSSDAQTILQNYLQTAARKRCRKHMMETDEFVSGASESYQMDSITISTAYLKIKNLCISIRNEIQADIKINNHNTIHGQHIFPSSIDLANITAAIYSTELCKRLRTFLSAWPPSSPQPHVNELLVATADFERDLESWNISSVQGGVDSRNLFHNYIMVWIQDMQLILFDLCKAEKVPWAGVTTNHSTSPFAEKMYENIKDNLIQYEVVINRWPQYSLYLENAVANIERAIVKSLEKQYSEILTPLKDSIPKRLHLQVQKLARRQSATVQLLPNQLGIFLNTIKRILDVLHCRVEDILNSWASCLPVMGDKKLFGEQMNGITVLLRTRYKTYLQAIIGNLVNNIQGNKSTRLKKMLEETREADGEAEVRERMQLLNSQLADFISNLHEVFTSQIFIAICRGLWDRMGQIVLKFLEGRKENRIWYNGSCYALGILDDTFASQMQRLRGNALQEKDIEPPRSVIEARSILCKDTTNAADPSTYFYI*