AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0817200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817200 MtrunA17_Chr5g0448351 94.440 1205 48 8 1 1192 1 1199 0.0 2311
Msa0817200 MtrunA17_Chr5g0427251 40.764 1283 614 27 1 1190 1 1230 0.0 902
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817200 AT5G48310.2 55.265 1187 446 20 33 1192 1 1129 0.0 1235
Msa0817200 AT5G48310.1 54.863 1203 453 19 33 1192 1 1156 0.0 1229
Msa0817200 AT4G24610.1 44.943 959 463 13 283 1190 206 1150 0.0 838
Msa0817200 AT4G24610.3 44.943 959 463 13 283 1190 210 1154 0.0 838
Msa0817200 AT4G24610.4 44.896 960 463 14 283 1190 206 1151 0.0 834
Msa0817200 AT4G24610.2 44.896 960 463 14 283 1190 210 1155 0.0 833
Msa0817200 AT5G65440.6 38.990 931 492 15 306 1182 175 1083 0.0 706
Msa0817200 AT5G65440.4 38.990 931 492 15 306 1182 175 1083 0.0 706
Msa0817200 AT5G65440.7 38.990 931 492 15 306 1182 175 1083 0.0 706
Msa0817200 AT5G65440.1 38.990 931 492 15 306 1182 134 1042 0.0 705
Msa0817200 AT5G65440.8 38.990 931 492 15 306 1182 134 1042 0.0 705
Msa0817200 AT5G65440.9 38.990 931 492 15 306 1182 134 1042 0.0 705
Msa0817200 AT5G65440.3 37.617 965 492 16 306 1182 175 1117 0.0 688
Msa0817200 AT5G65440.5 37.991 866 461 15 306 1117 175 1018 0.0 632
Msa0817200 AT5G65440.2 37.991 866 461 15 306 1117 134 977 0.0 632

Find 273 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTTAGCCGCAAGTTTC+GGG 0.157218 5_3:-52083095 None:intergenic
TCCCGAAACTTGCGGCTAAA+TGG 0.173469 5_3:+52083094 Msa0817200:CDS
GCCTCAATACTCCTTGTATT+TGG 0.182439 5_3:+52085439 Msa0817200:CDS
TCGCTTGTAAAGGGAAAATT+AGG 0.183051 5_3:+52086935 Msa0817200:three_prime_UTR
ACTTATTTGCAAGCAATAAT+AGG 0.201654 5_3:+52086011 Msa0817200:CDS
CTCACTTCTGGCCTTCATTA+GGG 0.203293 5_3:-52083384 None:intergenic
TTTAGGAGTAAGGTTATTAT+TGG 0.222301 5_3:-52079418 None:intergenic
TATGATGAGGAACAGTTATT+TGG 0.227662 5_3:+52079636 Msa0817200:CDS
TCTCACTTCTGGCCTTCATT+AGG 0.239461 5_3:-52083385 None:intergenic
GTAATTGTGAAACAAATTTC+TGG 0.249080 5_3:-52085150 None:intergenic
GGAGGTAAAGATGGAGATTT+AGG 0.251463 5_3:-52079435 None:intergenic
ACACAGCTCTGTGCTATAAA+TGG 0.254036 5_3:-52084880 None:intergenic
GAGCCAAGGGGATGCTTTAT+TGG 0.259764 5_3:+52082257 Msa0817200:CDS
GCCCATTTAGCCGCAAGTTT+CGG 0.273486 5_3:-52083096 None:intergenic
TTATCATTAAGGTAAGAAAT+TGG 0.284007 5_3:-52082327 None:intergenic
CTCACAGAGAAGTATACTTT+TGG 0.286313 5_3:+52083949 Msa0817200:intron
GAGGAACAGTTATTTGGATT+TGG 0.296334 5_3:+52079642 Msa0817200:CDS
TGATAGGGTACCACTCTTAT+TGG 0.298776 5_3:-52087074 None:intergenic
TTTGAATGATTCTGTTGATT+TGG 0.300090 5_3:+52079881 Msa0817200:CDS
AGCCTCTTGCCCATGCTTGC+AGG 0.302906 5_3:-52080903 None:intergenic
ACAGGTTTAACCGATCATTT+TGG 0.303277 5_3:+52084046 Msa0817200:CDS
CACATACAGGATTATCATTA+AGG 0.303700 5_3:-52082338 None:intergenic
CTGGCTCTTCGAAGTGCCTT+TGG 0.307080 5_3:+52080961 Msa0817200:CDS
GACAGACTGCAGCAAGAAAA+AGG 0.309951 5_3:+52084390 Msa0817200:intron
ATGGATCTTGCTACGCTCTT+GGG 0.310033 5_3:+52086496 Msa0817200:CDS
CATTCCTTTACAAAAGTGAT+AGG 0.315414 5_3:-52087090 None:intergenic
ACTTGCAAGTGAAGTCTCTT+TGG 0.319778 5_3:-52085674 None:intergenic
GCTGACCATGGATTGTATTA+TGG 0.323976 5_3:-52084568 None:intergenic
CTTCTAGAATTAACAGTGTT+AGG 0.324978 5_3:-52079747 None:intergenic
GACATATTGCTATGAAGATT+TGG 0.329067 5_3:-52086270 None:intergenic
AGATTTACTGATGGAGAGTT+AGG 0.331074 5_3:+52079768 Msa0817200:CDS
TTCTATAAGAAATGAAATTC+AGG 0.331997 5_3:+52084526 Msa0817200:CDS
ACTCCATGTGGAAGTGAAAT+TGG 0.340049 5_3:+52079819 Msa0817200:CDS
ATAGCACAGAGCTGTGTAAA+AGG 0.344097 5_3:+52084886 Msa0817200:CDS
CACAAGCTCCAGGCAGTCCT+TGG 0.345260 5_3:-52083345 None:intergenic
GACAGGATGCCCATGAATTT+AGG 0.345736 5_3:-52085911 None:intergenic
CTTATTTGCAAGCAATAATA+GGG 0.349385 5_3:+52086012 Msa0817200:CDS
TCATCATAGCATTGTGCAAT+TGG 0.349403 5_3:-52079621 None:intergenic
AGTTTCCTTCACGAAGAGTA+TGG 0.352168 5_3:+52087026 Msa0817200:three_prime_UTR
TCATGATAATCTCCACTTCC+AGG 0.356135 5_3:-52081803 None:intergenic
TTCTTGTAGATATCTATTAC+AGG 0.357704 5_3:+52083301 Msa0817200:intron
GCTCCTCCTATATTTGTTGA+TGG 0.363206 5_3:+52079915 Msa0817200:CDS
AGTCAGACTTCTCTCACTTC+TGG 0.363501 5_3:-52083396 None:intergenic
CACTCTTATTGGTAAGAGAT+TGG 0.363953 5_3:-52087063 None:intergenic
ATCTCGAGTCATGGAATATA+AGG 0.364375 5_3:+52084997 Msa0817200:CDS
GGACTGCCTTCTTAGAATCT+TGG 0.368271 5_3:-52082287 None:intergenic
TACCTTTCAGCAACAGTATT+AGG 0.369090 5_3:-52080086 None:intergenic
CAGAGATAACTTACTTGGTT+AGG 0.370777 5_3:-52085740 None:intergenic
TTCACAATTACATCATGGTT+TGG 0.372780 5_3:+52085162 Msa0817200:CDS
CTTCTGTTGCACTCTTGAGT+TGG 0.373272 5_3:-52081742 None:intergenic
ATGGGAGATAAGAAGTTGTT+TGG 0.376540 5_3:+52085942 Msa0817200:CDS
TATTGATTACCACTTCATAC+TGG 0.382046 5_3:-52085412 None:intergenic
AATGGATCTTGCTACGCTCT+TGG 0.383403 5_3:+52086495 Msa0817200:CDS
GATGCATTTGCTGACTACTA+TGG 0.386031 5_3:+52083136 Msa0817200:CDS
GGAGGAAAGAAAATAGAATA+TGG 0.387361 5_3:+52086469 Msa0817200:CDS
TTCATGTTTCAGTTCTGTGC+AGG 0.393565 5_3:+52085115 Msa0817200:intron
TGGCTCTTCGAAGTGCCTTT+GGG 0.394270 5_3:+52080962 Msa0817200:CDS
CAGTTATTTGGATTTGGTAA+TGG 0.403146 5_3:+52079648 Msa0817200:CDS
TAATAGAATCTCTTTCTTGT+TGG 0.405017 5_3:-52086987 None:intergenic
ACTTGCAATATCTCAATAAC+AGG 0.409440 5_3:+52080420 Msa0817200:CDS
CCTCGTAGTAACCTCGCTTT+CGG 0.410441 5_3:+52079483 Msa0817200:CDS
AAAGCATCCCCTTGGCTCAA+TGG 0.411838 5_3:-52082252 None:intergenic
CCACAAATTGTTCAGATTCA+AGG 0.412166 5_3:+52086109 Msa0817200:intron
CCCGAAACTTGCGGCTAAAT+GGG 0.412285 5_3:+52083095 Msa0817200:CDS
CCTTCACCATCAACAAATAT+AGG 0.414292 5_3:-52079921 None:intergenic
TTTCTTGTTGGCAAATGCTA+TGG 0.415080 5_3:-52086975 None:intergenic
AAGCATCCCCTTGGCTCAAT+GGG 0.416333 5_3:-52082251 None:intergenic
TTCGTCTATGCCTGCAAGCA+TGG 0.422145 5_3:+52080893 Msa0817200:CDS
TGAAGGTGATGTCGGTTATT+CGG 0.424528 5_3:+52079938 Msa0817200:CDS
CTTGATGAAAACTCGCCAAC+AGG 0.425161 5_3:+52084028 Msa0817200:CDS
GTTATTATTGGAAAGGGTTG+TGG 0.428594 5_3:-52079406 None:intergenic
TCTCAGATGCAAAGATTAAG+AGG 0.429798 5_3:+52086676 Msa0817200:CDS
TGGTGACAACAATCATATAA+AGG 0.432851 5_3:+52082545 Msa0817200:CDS
GGCAAGATCCAGCTCTCAAT+TGG 0.438777 5_3:+52082507 Msa0817200:CDS
AGTAAGGTTATTATTGGAAA+GGG 0.440715 5_3:-52079412 None:intergenic
TGATCTTTGTAAAGCAGAAA+AGG 0.441629 5_3:+52085211 Msa0817200:CDS
GACATCAAGTATCCTCTTGA+TGG 0.441717 5_3:-52085865 None:intergenic
ATATGCAGAGTGACAGAATT+CGG 0.441939 5_3:+52082448 Msa0817200:intron
TGCAGGCGTCGTAAGTGATA+AGG 0.442938 5_3:-52080870 None:intergenic
TGGTTACCTTGTTGATCCAT+TGG 0.445990 5_3:-52079095 None:intergenic
AAGGTAAGAAATTGGAATCC+TGG 0.447464 5_3:-52082319 None:intergenic
ACATGTGGCTGTGGACTTGA+TGG 0.447824 5_3:-52084936 None:intergenic
GGCATCCTGTCTACCTGTCA+TGG 0.449910 5_3:+52085923 Msa0817200:CDS
GATCAATGTATAAGCAAGTT+GGG 0.451761 5_3:+52081465 Msa0817200:CDS
AAAGTGTTCTCGCTTGTAAA+GGG 0.452871 5_3:+52086926 Msa0817200:three_prime_UTR
GGCTAAATGGGCCATGGAAA+TGG 0.453209 5_3:+52083107 Msa0817200:CDS
AACAAATGACACAGGTTCCA+TGG 0.454278 5_3:+52085315 Msa0817200:intron
TAGGCTTGAGTTTCCACAAC+AGG 0.455044 5_3:-52083028 None:intergenic
ATGAAGTGGTAATCAATAGA+TGG 0.456403 5_3:+52085417 Msa0817200:CDS
AAGATGGAGATTTAGGAGTA+AGG 0.456735 5_3:-52079428 None:intergenic
CGGAGAAGTAGAAGAATCAA+TGG 0.458672 5_3:-52079021 None:intergenic
GTCAAATACTCTTTCATCAT+CGG 0.464346 5_3:-52079586 None:intergenic
TATATGTAGAAATAAGTAGA+TGG 0.465515 5_3:-52086790 None:intergenic
GGGAAAATTAGGGCCGCAAA+AGG 0.466296 5_3:+52086946 Msa0817200:three_prime_UTR
ATCTCCCATGACAGGTAGAC+AGG 0.466496 5_3:-52085928 None:intergenic
AGCAGCAGGATAGGAGGTCT+TGG 0.466639 5_3:+52079997 Msa0817200:CDS
GTGGCGAAAAGTGGTGATCT+AGG 0.467825 5_3:-52079387 None:intergenic
AACTCCAACCAAGGACTGCC+TGG 0.468493 5_3:+52083337 Msa0817200:CDS
GTACTGCTGGAAGAGGGGTT+CGG 0.469467 5_3:+52079841 Msa0817200:CDS
GCAGGCGTCGTAAGTGATAA+GGG 0.470911 5_3:-52080869 None:intergenic
TTCCTTGTACTACCTTCAGT+TGG 0.472513 5_3:-52081115 None:intergenic
TTGTTTGGAGAGCAAATGAA+TGG 0.472679 5_3:+52085957 Msa0817200:CDS
TAGCAATATGTCGTGGATTG+TGG 0.475941 5_3:+52086281 Msa0817200:CDS
AGCAATATGTCGTGGATTGT+GGG 0.476986 5_3:+52086282 Msa0817200:CDS
TTCTTGTTGGCAAATGCTAT+GGG 0.477673 5_3:-52086974 None:intergenic
CTCAAGACAAAGAAGGTTGT+GGG 0.479223 5_3:+52081157 Msa0817200:CDS
GTCCATTTGGTAACTTTCTG+AGG 0.479994 5_3:-52084456 None:intergenic
AAAAGTGTTCTCGCTTGTAA+AGG 0.484004 5_3:+52086925 Msa0817200:three_prime_UTR
AAGTTGGGATGGAGTACGTC+AGG 0.485061 5_3:+52081480 Msa0817200:CDS
GTTTCATCCCTTGTGAAAAG+TGG 0.486018 5_3:+52081506 Msa0817200:CDS
TCCAAATACAAGGAGTATTG+AGG 0.487212 5_3:-52085440 None:intergenic
CCGATTCATATGCTAAATTG+AGG 0.487243 5_3:+52083164 Msa0817200:CDS
ACCCTCCAACAATATATCAT+AGG 0.489559 5_3:-52083047 None:intergenic
AGATGGTAATGCTGTCCATT+TGG 0.491575 5_3:-52084469 None:intergenic
GTTTCTAAAAGATGAGTGTC+TGG 0.492440 5_3:+52080942 Msa0817200:CDS
AGCTCATTCACATGTGGCTG+TGG 0.493960 5_3:-52084945 None:intergenic
TGGAAGACATCCTAAATTCA+TGG 0.495445 5_3:+52085901 Msa0817200:CDS
TCATGTTTCAGTTCTGTGCA+GGG 0.496350 5_3:+52085116 Msa0817200:intron
AAATGACTCAGCAGCAGGAT+AGG 0.498541 5_3:+52079988 Msa0817200:CDS
CCTCAATTTAGCATATGAAT+CGG 0.500851 5_3:-52083164 None:intergenic
AAGAGGCTGTACTGAGGCCC+CGG 0.501987 5_3:+52080918 Msa0817200:CDS
GGAAGTGAAATTGGTACTGC+TGG 0.503174 5_3:+52079828 Msa0817200:CDS
AGGCAGTCCATGGTGAAGCC+AGG 0.503776 5_3:+52082301 Msa0817200:CDS
ACAACCTTCTTTGTCTTGAG+AGG 0.505297 5_3:-52081154 None:intergenic
TGCCTCAGAAAGTTACCAAA+TGG 0.505968 5_3:+52084454 Msa0817200:CDS
TTTGGTATGCTATCTTTCAA+AGG 0.506151 5_3:-52085656 None:intergenic
TTTGTTTCACAATTACATCA+TGG 0.508017 5_3:+52085157 Msa0817200:CDS
ATGACACAGGTTCCATGGGC+TGG 0.508635 5_3:+52085320 Msa0817200:intron
TCGTCTATGCCTGCAAGCAT+GGG 0.511245 5_3:+52080894 Msa0817200:CDS
TCAAGCCTATGATATATTGT+TGG 0.513388 5_3:+52083042 Msa0817200:CDS
TGGTGAAGTGGAATGATTTG+TGG 0.516170 5_3:-52085348 None:intergenic
TATTGCTATGAAGATTTGGC+TGG 0.516781 5_3:-52086266 None:intergenic
TCTCAAGACAAAGAAGGTTG+TGG 0.517514 5_3:+52081156 Msa0817200:CDS
GAAATTGGTACTGCTGGAAG+AGG 0.520455 5_3:+52079834 Msa0817200:CDS
TCATCGGTCTCAGCTGCAGC+AGG 0.520569 5_3:-52079570 None:intergenic
CCCTTCCTCAAAATTCCACT+AGG 0.520908 5_3:-52079693 None:intergenic
TCACTCTCAGTGACAGAAGA+AGG 0.521728 5_3:+52081551 Msa0817200:CDS
GAGTAAGGTTATTATTGGAA+AGG 0.521775 5_3:-52079413 None:intergenic
CGCTTGTAAAGGGAAAATTA+GGG 0.522265 5_3:+52086936 Msa0817200:three_prime_UTR
AAATGAATCAGAGTCATGTT+CGG 0.522569 5_3:+52081766 Msa0817200:CDS
TCACTTCTGGCCTTCATTAG+GGG 0.524637 5_3:-52083383 None:intergenic
TTGTACTTCCAATTGAGAGC+TGG 0.525299 5_3:-52082515 None:intergenic
AGATATTGCAAGTGTGGAGG+AGG 0.526974 5_3:-52080410 None:intergenic
GGATCAATGTATAAGCAAGT+TGG 0.527369 5_3:+52081464 Msa0817200:CDS
TCGTGGATTGTGGGACAGAA+TGG 0.528693 5_3:+52086291 Msa0817200:CDS
AGCCTATGATATATTGTTGG+AGG 0.530615 5_3:+52083045 Msa0817200:CDS
TTCAGTTTCCCATTGAGCCA+AGG 0.531016 5_3:+52082243 Msa0817200:intron
CTACTGTAGACTTGTAGAGC+AGG 0.532410 5_3:-52084103 None:intergenic
AGCTCCAGGCAGTCCTTGGT+TGG 0.532583 5_3:-52083341 None:intergenic
AACAACCATAATACAATCCA+TGG 0.534702 5_3:+52084563 Msa0817200:CDS
TTAGCCGCAAGTTTCGGGAG+TGG 0.537146 5_3:-52083090 None:intergenic
GTAAGTGATAAGGGTTTGCC+AGG 0.537868 5_3:-52080860 None:intergenic
CTTGCTTATACATTGATCCT+CGG 0.538232 5_3:-52081460 None:intergenic
TCTTTCTATGCCCTGTGTAG+AGG 0.538250 5_3:-52080381 None:intergenic
GGTCTCAGCTGCAGCAGGAC+AGG 0.539299 5_3:-52079565 None:intergenic
TACACAGGGCATAGAAAGAC+AGG 0.540262 5_3:+52080385 Msa0817200:CDS
GAAAGGGTTGTGGCGAAAAG+TGG 0.541954 5_3:-52079396 None:intergenic
AGTTGGATCAAACAATGCAT+TGG 0.548129 5_3:-52081725 None:intergenic
TCAGTTTCCCATTGAGCCAA+GGG 0.548372 5_3:+52082244 Msa0817200:intron
GGTAAAGACCTCATGAAGGT+TGG 0.548390 5_3:-52086245 None:intergenic
TGTAGAGCAGGATGTAAAGC+TGG 0.549874 5_3:-52084091 None:intergenic
TGTCTTCCACTCTACAATGT+AGG 0.551082 5_3:-52085887 None:intergenic
TTGCAGGCATAGACGAATGC+AGG 0.551829 5_3:-52080887 None:intergenic
TTTCTCAGCAAATGGTGAAG+TGG 0.552861 5_3:-52085360 None:intergenic
AAGTGGTATACAGTCTATGA+AGG 0.554143 5_3:+52081523 Msa0817200:CDS
GAGACTGATGAATTTGTGTC+GGG 0.554425 5_3:+52084431 Msa0817200:CDS
AGAAGTCCAAGATTCTAAGA+AGG 0.555902 5_3:+52082281 Msa0817200:CDS
TTGAGATATTGCAAGTGTGG+AGG 0.557086 5_3:-52080413 None:intergenic
GTTGATGGTGAAGGTGATGT+CGG 0.557464 5_3:+52079930 Msa0817200:CDS
CCTATATTTGTTGATGGTGA+AGG 0.557712 5_3:+52079921 Msa0817200:CDS
ATTCCTTTACAAAAGTGATA+GGG 0.558365 5_3:-52087089 None:intergenic
AAATGATCGGTTAAACCTGT+TGG 0.559634 5_3:-52084043 None:intergenic
GTAACTCTTTCACAAGCTCC+AGG 0.560180 5_3:-52083355 None:intergenic
AAAAGTGGTGATCTAGGAAG+AGG 0.560426 5_3:-52079381 None:intergenic
GGCTGTGGCAAATATTGAAA+GGG 0.560699 5_3:+52085589 Msa0817200:intron
TGGATCTTGCTACGCTCTTG+GGG 0.560823 5_3:+52086497 Msa0817200:CDS
GTTACTTGATCCCCTAATGA+AGG 0.563068 5_3:+52083373 Msa0817200:CDS
CGATGAAATGACTCAGCAGC+AGG 0.563082 5_3:+52079983 Msa0817200:CDS
CTTCAGGTATGCCGTTGAGA+TGG 0.565249 5_3:-52084486 None:intergenic
GAGAAGCAGAAGTTCGTGAA+AGG 0.567985 5_3:+52086185 Msa0817200:CDS
AAATTGGTACTGCTGGAAGA+GGG 0.568372 5_3:+52079835 Msa0817200:CDS
AATGTATAAGCAAGTTGGGA+TGG 0.569458 5_3:+52081469 Msa0817200:CDS
AATTCTAGAAGATTTACTGA+TGG 0.569546 5_3:+52079759 Msa0817200:CDS
TGAGAACTTTCCTTTCTGCA+TGG 0.569606 5_3:+52084910 Msa0817200:CDS
AGGCTGTGGCAAATATTGAA+AGG 0.569983 5_3:+52085588 Msa0817200:intron
ACAAATGACACAGGTTCCAT+GGG 0.570078 5_3:+52085316 Msa0817200:intron
AGAGTGACAGAATTCGGTGG+TGG 0.570925 5_3:+52082454 Msa0817200:intron
AACTTCTTATCTCCCATGAC+AGG 0.571486 5_3:-52085936 None:intergenic
ACTGCAGAGTGCTCCTGTTG+TGG 0.571685 5_3:+52083015 Msa0817200:intron
TGGATGAAACTGCACTCCAA+TGG 0.572829 5_3:+52079079 Msa0817200:CDS
CAACTTAATCCAGTATGAAG+TGG 0.574199 5_3:+52085403 Msa0817200:CDS
GATTCTGTGAATTGTGATGA+TGG 0.575898 5_3:+52080029 Msa0817200:CDS
TCAAGAAACAACCTCTACAC+AGG 0.577200 5_3:+52080370 Msa0817200:CDS
TATTCTACAGAACTATCTGC+AGG 0.579462 5_3:+52084159 Msa0817200:CDS
TTGAACGCGATCTCGAGTCA+TGG 0.579995 5_3:+52084988 Msa0817200:CDS
TGCCTGCAAGCATGGGCAAG+AGG 0.580416 5_3:+52080901 Msa0817200:CDS
TATACAAAGAAGAAAACTGA+AGG 0.581707 5_3:+52081424 Msa0817200:CDS
AAGGTGTAGAAAACACATGA+TGG 0.582937 5_3:+52084409 Msa0817200:CDS
ACAAATATAGGAGGAGCACT+TGG 0.582954 5_3:-52079909 None:intergenic
GGAAGACATCCTAAATTCAT+GGG 0.584196 5_3:+52085902 Msa0817200:CDS
CGTGGATTGTGGGACAGAAT+GGG 0.584754 5_3:+52086292 Msa0817200:CDS
GTTGCAATAGTCAAGATGCC+TGG 0.586675 5_3:+52080842 Msa0817200:CDS
CTTTGCCATACTCTTCGTGA+AGG 0.587668 5_3:-52087031 None:intergenic
GCATCCTGTCTACCTGTCAT+GGG 0.587857 5_3:+52085924 Msa0817200:CDS
GAAAATAGAATATGGTACAA+TGG 0.588488 5_3:+52086477 Msa0817200:CDS
CATGATGATAATGAATGTGT+TGG 0.588840 5_3:+52082486 Msa0817200:CDS
TGCCTAATACTGTTGCTGAA+AGG 0.589120 5_3:+52080084 Msa0817200:CDS
GAGTGACAGAATTCGGTGGT+GGG 0.589193 5_3:+52082455 Msa0817200:intron
ATTGTGGGACAGAATGGGAC+AGG 0.589891 5_3:+52086297 Msa0817200:CDS
CTCAGTTAGAGGAGAGCGTG+TGG 0.590106 5_3:-52079349 None:intergenic
TTGATGGTGGCCATGCAGAA+AGG 0.591303 5_3:-52084920 None:intergenic
CATGATAATCTCCACTTCCA+GGG 0.592137 5_3:-52081802 None:intergenic
GGTTGTGGGGAAAATAAGAG+TGG 0.592804 5_3:+52081171 Msa0817200:CDS
TGACTCAGCAGCAGGATAGG+AGG 0.593992 5_3:+52079991 Msa0817200:CDS
GCATCTAACAACCATTTCCA+TGG 0.594327 5_3:-52083118 None:intergenic
CTACCAATAAAGCATCCCCT+TGG 0.594424 5_3:-52082260 None:intergenic
GAATGTAGCAACTCCAACCA+AGG 0.598101 5_3:+52083328 Msa0817200:CDS
GCCTATGATATATTGTTGGA+GGG 0.599388 5_3:+52083046 Msa0817200:CDS
GTGGGGAAAATAAGAGTGGA+AGG 0.600347 5_3:+52081175 Msa0817200:CDS
GATTCTAAGAAGGCAGTCCA+TGG 0.600429 5_3:+52082291 Msa0817200:CDS
ACTTGCGGCTAAATGGGCCA+TGG 0.602220 5_3:+52083101 Msa0817200:CDS
AGCAGGATGTAAAGCTGGCG+CGG 0.602954 5_3:-52084086 None:intergenic
TTTGTGGTTACTCCAGCCCA+TGG 0.604020 5_3:-52085332 None:intergenic
AGTGCCTCTCAAGACAAAGA+AGG 0.604507 5_3:+52081150 Msa0817200:CDS
AGCCAACTGAAGGTAGTACA+AGG 0.604967 5_3:+52081113 Msa0817200:CDS
TTGGAATCCTGGCTTCACCA+TGG 0.605696 5_3:-52082308 None:intergenic
GGAGACTGATGAATTTGTGT+CGG 0.611838 5_3:+52084430 Msa0817200:CDS
CATTTCTTATAGAAATACAA+AGG 0.614859 5_3:-52084517 None:intergenic
AGATGCTAGACCAAAATGAT+CGG 0.615442 5_3:-52084056 None:intergenic
GGTGATGTCGGTTATTCGGA+AGG 0.617182 5_3:+52079942 Msa0817200:CDS
ATCTTCATAGCAATATGTCG+TGG 0.620851 5_3:+52086274 Msa0817200:CDS
GTTTCCACTCCCGAAACTTG+CGG 0.622116 5_3:+52083086 Msa0817200:CDS
GGCTGGTAAAGACCTCATGA+AGG 0.622315 5_3:-52086249 None:intergenic
CGGTTATTCGGAAGGATCCG+TGG 0.624271 5_3:+52079950 Msa0817200:CDS
GAGGAAACGAGAGAAGCAGA+TGG 0.624705 5_3:+52086163 Msa0817200:CDS
CTTCATCTCCAACCTTCATG+AGG 0.625205 5_3:+52086237 Msa0817200:CDS
GAAGTGAGAGAAGTCTGACT+AGG 0.628633 5_3:+52083399 Msa0817200:CDS
CGAGGTATAAAGCCAACTGA+AGG 0.628927 5_3:+52081103 Msa0817200:CDS
CAAGAAACAACCTCTACACA+GGG 0.629450 5_3:+52080371 Msa0817200:CDS
CCTAAACCCCTAAAACCTAG+TGG 0.630048 5_3:+52079678 Msa0817200:CDS
TCAGTTGGCTTTATACCTCG+AGG 0.631132 5_3:-52081100 None:intergenic
TGTGGCTGTGGACTTGATGG+TGG 0.632595 5_3:-52084933 None:intergenic
TCACCATCAACAAATATAGG+AGG 0.635308 5_3:-52079918 None:intergenic
GAGAAGTCTGACTAGGCAAG+AGG 0.636214 5_3:+52083406 Msa0817200:CDS
GTATCTGGTTCTCAGTAACA+CGG 0.636684 5_3:-52085985 None:intergenic
TTATTGAGATATTGCAAGTG+TGG 0.638514 5_3:-52080416 None:intergenic
ATACAAAGAAGAAAACTGAA+GGG 0.639387 5_3:+52081425 Msa0817200:CDS
CAGTTTCCCATTGAGCCAAG+GGG 0.639439 5_3:+52082245 Msa0817200:intron
CAATCTCTTACCAATAAGAG+TGG 0.645216 5_3:+52087064 Msa0817200:three_prime_UTR
CGAGCTTCAATCACTGAGCG+AGG 0.647220 5_3:-52086730 None:intergenic
TGATGTCCTACATTGTAGAG+TGG 0.648648 5_3:+52085881 Msa0817200:CDS
TGTTTCAGTTCTGTGCAGGG+AGG 0.649450 5_3:+52085119 Msa0817200:intron
GTGAATTGTGATGATGGAGG+AGG 0.651967 5_3:+52080035 Msa0817200:CDS
GAGTTCTTGTTGCAACCTCG+AGG 0.652321 5_3:+52081085 Msa0817200:CDS
TATTCTTGAACACCATCAAG+AGG 0.652692 5_3:+52085853 Msa0817200:CDS
ATTGGAAGTACAATGACAAG+TGG 0.653819 5_3:+52082525 Msa0817200:CDS
CAGAAGAAAATGACTCCATG+TGG 0.655141 5_3:+52079807 Msa0817200:CDS
AATTGCACAATGCTATGATG+AGG 0.655222 5_3:+52079623 Msa0817200:CDS
TTCATCGACTTGATTCGCCA+CGG 0.655644 5_3:-52079967 None:intergenic
AATTGGTACTGCTGGAAGAG+GGG 0.656682 5_3:+52079836 Msa0817200:CDS
ACATGTGAATGAGCTTCTAG+TGG 0.657596 5_3:+52084953 Msa0817200:CDS
TCAAGACAAAGAAGGTTGTG+GGG 0.665374 5_3:+52081158 Msa0817200:CDS
GGACAGCATTACCATCTCAA+CGG 0.666424 5_3:+52084475 Msa0817200:CDS
GTACCAATTTCACTTCCACA+TGG 0.670567 5_3:-52079822 None:intergenic
ACTAGAAGCTCATTCACATG+TGG 0.678399 5_3:-52084951 None:intergenic
TCTGTGAATTGTGATGATGG+AGG 0.678617 5_3:+52080032 Msa0817200:CDS
GCTTCAATCACTGAGCGAGG+AGG 0.678724 5_3:-52086727 None:intergenic
TTCAAGGTAATAAGAGCACA+CGG 0.684888 5_3:+52086125 Msa0817200:CDS
GATCGTTGAATCCGAAAGCG+AGG 0.685240 5_3:-52079494 None:intergenic
TGCAGAGTGACAGAATTCGG+TGG 0.714678 5_3:+52082451 Msa0817200:intron
ATGGGCAAGAGGCTGTACTG+AGG 0.720091 5_3:+52080912 Msa0817200:CDS
TGCACTCCAATGGATCAACA+AGG 0.722010 5_3:+52079089 Msa0817200:CDS
CCGAAAGCGAGGTTACTACG+AGG 0.776363 5_3:-52079483 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAAAAAAAAGAG+AGG - chr5_3:52080805-52080824 None:intergenic 10.0%
!!! TCTCTTTTTTTTTTTTTTTA+TGG + chr5_3:52080804-52080823 Msa0817200:intron 10.0%
!! ATTTACAATTTATAACTATA+AGG - chr5_3:52081204-52081223 None:intergenic 10.0%
!! AAAAATTACTAATGTATTTA+TGG + chr5_3:52081315-52081334 Msa0817200:intron 10.0%
!!! AGCTTTTAATTTTTTTAATT+AGG + chr5_3:52081641-52081660 Msa0817200:intron 10.0%
!!! GCTTTTAATTTTTTTAATTA+GGG + chr5_3:52081642-52081661 Msa0817200:intron 10.0%
!!! AAAAGAATGAATAATTTTAT+TGG - chr5_3:52083734-52083753 None:intergenic 10.0%
!!! TTTTTTTTGATTAATGAAAC+AGG + chr5_3:52079293-52079312 Msa0817200:intron 15.0%
!!! TTTTTTTGATTAATGAAACA+GGG + chr5_3:52079294-52079313 Msa0817200:intron 15.0%
!!! AAAGAAGAATTGAATTTTAA+AGG - chr5_3:52079459-52079478 None:intergenic 15.0%
!!! TCATTTTCTTAAATTACTAT+CGG - chr5_3:52080200-52080219 None:intergenic 15.0%
!! TAAGAAAATGAATTTCAAAA+AGG - chr5_3:52080320-52080339 None:intergenic 15.0%
!!! TTTGAAATTCATTTTCTTAA+CGG + chr5_3:52080321-52080340 Msa0817200:intron 15.0%
!! AGATGATTATTACATAAATT+TGG - chr5_3:52082420-52082439 None:intergenic 15.0%
!! AAATTTATGTAATAATCATC+TGG + chr5_3:52082419-52082438 Msa0817200:intron 15.0%
!! AATATTTGTATTCATTAGTT+AGG + chr5_3:52083541-52083560 Msa0817200:intron 15.0%
!! TTATATCTGATAAAAACAAA+TGG + chr5_3:52083605-52083624 Msa0817200:intron 15.0%
!! TAATATGTATTAAGCAAAAA+GGG - chr5_3:52084792-52084811 None:intergenic 15.0%
!! TTAATATGTATTAAGCAAAA+AGG - chr5_3:52084793-52084812 None:intergenic 15.0%
!!! ATTTTGTTCTGTAAAAAATT+TGG - chr5_3:52086857-52086876 None:intergenic 15.0%
!!! TTTTTTCCTTTTTTTGAGTT+CGG - chr5_3:52079044-52079063 None:intergenic 20.0%
!! AACTGTAATTGAGTAATAAA+AGG - chr5_3:52079164-52079183 None:intergenic 20.0%
!!! TTTAAAGTCACATAAATGAT+TGG - chr5_3:52080626-52080645 None:intergenic 20.0%
!! TCTAATTTCTCTAATTTCAT+AGG + chr5_3:52081056-52081075 Msa0817200:intron 20.0%
!!! TTGAATATTTCTGTACAAAT+TGG + chr5_3:52081234-52081253 Msa0817200:intron 20.0%
!! TTATCATTAAGGTAAGAAAT+TGG - chr5_3:52082330-52082349 None:intergenic 20.0%
!! GATTATTACATAAATTTGGA+TGG - chr5_3:52082416-52082435 None:intergenic 20.0%
!! TACATTAGTTCAATAAATCT+TGG + chr5_3:52082587-52082606 Msa0817200:intron 20.0%
!! AAGAGAAAAAAAAAGTTACA+CGG + chr5_3:52082676-52082695 Msa0817200:intron 20.0%
!! AAAATTGTTCATTAAGAACT+AGG + chr5_3:52082729-52082748 Msa0817200:intron 20.0%
!!! TTATTATTTTTGCCTTGTTA+GGG - chr5_3:52083212-52083231 None:intergenic 20.0%
!! TATTCATTAGTTAGGATATA+AGG + chr5_3:52083549-52083568 Msa0817200:intron 20.0%
!!! GTTTTTTTTAATTGTGTCAT+GGG - chr5_3:52083801-52083820 None:intergenic 20.0%
!!! TGTTTTTTTTAATTGTGTCA+TGG - chr5_3:52083802-52083821 None:intergenic 20.0%
!! TTACTGTTTGTATTATTTGT+TGG + chr5_3:52083862-52083881 Msa0817200:intron 20.0%
!!! GTTTTGGTTTCTAAATAAAA+TGG + chr5_3:52084359-52084378 Msa0817200:intron 20.0%
!! CATTTCTTATAGAAATACAA+AGG - chr5_3:52084520-52084539 None:intergenic 20.0%
!! TTCTATAAGAAATGAAATTC+AGG + chr5_3:52084526-52084545 Msa0817200:CDS 20.0%
!!! AAATTTAGTTTTTCAACACT+AGG + chr5_3:52084670-52084689 Msa0817200:intron 20.0%
!!! AATTTAGTTTTTCAACACTA+GGG + chr5_3:52084671-52084690 Msa0817200:intron 20.0%
!! AATATGTATTAAGCAAAAAG+GGG - chr5_3:52084791-52084810 None:intergenic 20.0%
!! AAGACATTATACTAACTAAA+GGG - chr5_3:52085504-52085523 None:intergenic 20.0%
!! AAAGACATTATACTAACTAA+AGG - chr5_3:52085505-52085524 None:intergenic 20.0%
!!! ATTGTTTTGAAATTTCTAGA+AGG + chr5_3:52086447-52086466 Msa0817200:CDS 20.0%
!!! TTGTTTTGAAATTTCTAGAA+GGG + chr5_3:52086448-52086467 Msa0817200:CDS 20.0%
!! TATATGTAGAAATAAGTAGA+TGG - chr5_3:52086793-52086812 None:intergenic 20.0%
! AAGGAAAAAATGTTTACAGA+AGG + chr5_3:52079054-52079073 Msa0817200:exon 25.0%
! AAAAATGTTTACAGAAGGAT+TGG + chr5_3:52079059-52079078 Msa0817200:exon 25.0%
!! AAAGGAAAGTTTGAGTTTAT+TGG - chr5_3:52079260-52079279 None:intergenic 25.0%
! AGTAAGGTTATTATTGGAAA+GGG - chr5_3:52079415-52079434 None:intergenic 25.0%
! TTTAGGAGTAAGGTTATTAT+TGG - chr5_3:52079421-52079440 None:intergenic 25.0%
!!! AATTTTAAAGGAGGTAAAGA+TGG - chr5_3:52079447-52079466 None:intergenic 25.0%
!!! GAAGAATTGAATTTTAAAGG+AGG - chr5_3:52079456-52079475 None:intergenic 25.0%
!! AATTCTAGAAGATTTACTGA+TGG + chr5_3:52079759-52079778 Msa0817200:CDS 25.0%
!! TTTGAATGATTCTGTTGATT+TGG + chr5_3:52079881-52079900 Msa0817200:CDS 25.0%
! ACATAATTCAATGTAATCGT+CGG + chr5_3:52080219-52080238 Msa0817200:intron 25.0%
! TATATATAGCAGTTAGTACA+TGG + chr5_3:52080473-52080492 Msa0817200:intron 25.0%
!!! GTTTAATTTTCATGCACTTT+TGG + chr5_3:52080567-52080586 Msa0817200:intron 25.0%
!! GTTTTACAAAAACACCTATT+TGG + chr5_3:52080998-52081017 Msa0817200:intron 25.0%
! AGAAATAAGAGAAATGATTG+AGG - chr5_3:52081037-52081056 None:intergenic 25.0%
! TGGTTGTATTTGATATTGTT+TGG + chr5_3:52081335-52081354 Msa0817200:intron 25.0%
! TATACAAAGAAGAAAACTGA+AGG + chr5_3:52081424-52081443 Msa0817200:CDS 25.0%
! ATACAAAGAAGAAAACTGAA+GGG + chr5_3:52081425-52081444 Msa0817200:CDS 25.0%
! CCTTTAACTCATTCATATAT+AGG - chr5_3:52081683-52081702 None:intergenic 25.0%
! CCTATATATGAATGAGTTAA+AGG + chr5_3:52081680-52081699 Msa0817200:intron 25.0%
!! TATATGCTTTTACTACTTGA+TGG + chr5_3:52081992-52082011 Msa0817200:intron 25.0%
! ATCTTAAGAGATCTTATAAC+TGG + chr5_3:52082212-52082231 Msa0817200:intron 25.0%
! ATAAATTTGGATGGTGTAAA+GGG - chr5_3:52082407-52082426 None:intergenic 25.0%
! TAAAATCAGGTTATCAGTTT+AGG + chr5_3:52082821-52082840 Msa0817200:intron 25.0%
!!! TATTATTTTTGCCTTGTTAG+GGG - chr5_3:52083211-52083230 None:intergenic 25.0%
!!! CTTATTATTTTTGCCTTGTT+AGG - chr5_3:52083213-52083232 None:intergenic 25.0%
! TTCTTGTAGATATCTATTAC+AGG + chr5_3:52083301-52083320 Msa0817200:intron 25.0%
! TATCTGATAAAAACAAATGG+AGG + chr5_3:52083608-52083627 Msa0817200:intron 25.0%
!! ATTTTTACCTTGAGTTACTT+TGG + chr5_3:52083890-52083909 Msa0817200:intron 25.0%
!!! TTTTTACCTTGAGTTACTTT+GGG + chr5_3:52083891-52083910 Msa0817200:intron 25.0%
!!! CAAAATGAGACTTTTTGTTT+TGG + chr5_3:52084343-52084362 Msa0817200:intron 25.0%
!!! TACAAAGGTTTTTTATCTTC+AGG - chr5_3:52084505-52084524 None:intergenic 25.0%
!!! ATTTAGTTTTTCAACACTAG+GGG + chr5_3:52084672-52084691 Msa0817200:intron 25.0%
! ATATGTATTAAGCAAAAAGG+GGG - chr5_3:52084790-52084809 None:intergenic 25.0%
!! AATTTTCAGTTCAATTGACT+TGG + chr5_3:52084842-52084861 Msa0817200:intron 25.0%
! GAAATGATATTGTAATCTTG+TGG - chr5_3:52085080-52085099 None:intergenic 25.0%
! GTAATTGTGAAACAAATTTC+TGG - chr5_3:52085153-52085172 None:intergenic 25.0%
! TTTGTTTCACAATTACATCA+TGG + chr5_3:52085157-52085176 Msa0817200:CDS 25.0%
!! ACTTACATTTTCCAAATACA+AGG - chr5_3:52085453-52085472 None:intergenic 25.0%
!!! TTGCAAATAAGTTTTGTATC+TGG - chr5_3:52086003-52086022 None:intergenic 25.0%
! ACTTATTTGCAAGCAATAAT+AGG + chr5_3:52086011-52086030 Msa0817200:CDS 25.0%
! CTTATTTGCAAGCAATAATA+GGG + chr5_3:52086012-52086031 Msa0817200:CDS 25.0%
! TACTAGTTGTATATTGTAGT+TGG - chr5_3:52086328-52086347 None:intergenic 25.0%
! AAAACAATCTATCACATTAG+AGG - chr5_3:52086435-52086454 None:intergenic 25.0%
! GAAAATAGAATATGGTACAA+TGG + chr5_3:52086477-52086496 Msa0817200:CDS 25.0%
! ATGTTTCACTTTGTAGATAT+TGG + chr5_3:52086639-52086658 Msa0817200:intron 25.0%
! TAATAGAATCTCTTTCTTGT+TGG - chr5_3:52086990-52087009 None:intergenic 25.0%
! ATTCCTTTACAAAAGTGATA+GGG - chr5_3:52087092-52087111 None:intergenic 25.0%
AGAAGAAAGAAGGTTAAGTT+AGG - chr5_3:52079121-52079140 None:intergenic 30.0%
GAAAGAAGAAAGAAGAAAGA+AGG - chr5_3:52079131-52079150 None:intergenic 30.0%
GAGTAAGGTTATTATTGGAA+AGG - chr5_3:52079416-52079435 None:intergenic 30.0%
GTCAAATACTCTTTCATCAT+CGG - chr5_3:52079589-52079608 None:intergenic 30.0%
TATGATGAGGAACAGTTATT+TGG + chr5_3:52079636-52079655 Msa0817200:CDS 30.0%
! CAGTTATTTGGATTTGGTAA+TGG + chr5_3:52079648-52079667 Msa0817200:CDS 30.0%
!! AAAATTCCACTAGGTTTTAG+GGG - chr5_3:52079687-52079706 None:intergenic 30.0%
! CAAAATTCCACTAGGTTTTA+GGG - chr5_3:52079688-52079707 None:intergenic 30.0%
! TCAAAATTCCACTAGGTTTT+AGG - chr5_3:52079689-52079708 None:intergenic 30.0%
! TAAAACCTAGTGGAATTTTG+AGG + chr5_3:52079688-52079707 Msa0817200:CDS 30.0%
!! CTTCTAGAATTAACAGTGTT+AGG - chr5_3:52079750-52079769 None:intergenic 30.0%
GTAACACAAAGCAACAAAAA+AGG - chr5_3:52080132-52080151 None:intergenic 30.0%
CTGTAAATTTCAACATCAGA+AGG - chr5_3:52080350-52080369 None:intergenic 30.0%
TTATTGAGATATTGCAAGTG+TGG - chr5_3:52080419-52080438 None:intergenic 30.0%
ACTTGCAATATCTCAATAAC+AGG + chr5_3:52080420-52080439 Msa0817200:CDS 30.0%
GATCAATGTATAAGCAAGTT+GGG + chr5_3:52081465-52081484 Msa0817200:CDS 30.0%
AAATGAATCAGAGTCATGTT+CGG + chr5_3:52081766-52081785 Msa0817200:CDS 30.0%
! TCTTATATGTTTCTAACAGC+AGG - chr5_3:52081901-52081920 None:intergenic 30.0%
! ATTCTTATGTTTCTAACAGC+AGG - chr5_3:52082037-52082056 None:intergenic 30.0%
TTTAGACTATTGTCGAAGAA+AGG + chr5_3:52082084-52082103 Msa0817200:intron 30.0%
!! TTGCTTTTCAACTGTTAAGA+AGG - chr5_3:52082132-52082151 None:intergenic 30.0%
CACATACAGGATTATCATTA+AGG - chr5_3:52082341-52082360 None:intergenic 30.0%
GGAATGTCTATGAACAAATA+TGG - chr5_3:52082376-52082395 None:intergenic 30.0%
CATAAATTTGGATGGTGTAA+AGG - chr5_3:52082408-52082427 None:intergenic 30.0%
! CATGATGATAATGAATGTGT+TGG + chr5_3:52082486-52082505 Msa0817200:CDS 30.0%
TGGTGACAACAATCATATAA+AGG + chr5_3:52082545-52082564 Msa0817200:CDS 30.0%
!! ATTTCTTTACCCTATTTCTG+AGG + chr5_3:52082757-52082776 Msa0817200:intron 30.0%
!! TTTCTTTACCCTATTTCTGA+GGG + chr5_3:52082758-52082777 Msa0817200:intron 30.0%
AACATTTACCCTCAGAAATA+GGG - chr5_3:52082769-52082788 None:intergenic 30.0%
CATATCCACTACTTAAAATC+AGG + chr5_3:52082808-52082827 Msa0817200:intron 30.0%
!! GATAACCTGATTTTAAGTAG+TGG - chr5_3:52082816-52082835 None:intergenic 30.0%
!! TTCCTATGAGTAGTTTTACT+TGG + chr5_3:52082903-52082922 Msa0817200:intron 30.0%
!! TCCTATGAGTAGTTTTACTT+GGG + chr5_3:52082904-52082923 Msa0817200:intron 30.0%
TCAAGCCTATGATATATTGT+TGG + chr5_3:52083042-52083061 Msa0817200:CDS 30.0%
CCTCAATTTAGCATATGAAT+CGG - chr5_3:52083167-52083186 None:intergenic 30.0%
GAGAAATCCTTTGTAGATAA+GGG + chr5_3:52083663-52083682 Msa0817200:intron 30.0%
AGAAATCCTTTGTAGATAAG+GGG + chr5_3:52083664-52083683 Msa0817200:intron 30.0%
TTGGATGAATGAGAAAGAAT+AGG - chr5_3:52083715-52083734 None:intergenic 30.0%
!!! TCTCATTTTGTTATTGTTGC+AGG - chr5_3:52084333-52084352 None:intergenic 30.0%
AACAACCATAATACAATCCA+TGG + chr5_3:52084563-52084582 Msa0817200:CDS 30.0%
! CATATTTTTCCCAGGTATTT+TGG + chr5_3:52084590-52084609 Msa0817200:intron 30.0%
AAAATTCAGGCTGTATTTAG+TGG - chr5_3:52085052-52085071 None:intergenic 30.0%
! TCTTGTGGAATCTAAAATTC+AGG - chr5_3:52085065-52085084 None:intergenic 30.0%
TTCACAATTACATCATGGTT+TGG + chr5_3:52085162-52085181 Msa0817200:CDS 30.0%
TGATCTTTGTAAAGCAGAAA+AGG + chr5_3:52085211-52085230 Msa0817200:CDS 30.0%
TCATTTGTTTGTAAGAAGGA+GGG - chr5_3:52085304-52085323 None:intergenic 30.0%
!! TGTGTCATTTGTTTGTAAGA+AGG - chr5_3:52085308-52085327 None:intergenic 30.0%
TTCTTACAAACAAATGACAC+AGG + chr5_3:52085307-52085326 Msa0817200:intron 30.0%
! TCATACATTTTCTCAGCAAA+TGG - chr5_3:52085371-52085390 None:intergenic 30.0%
! TATTGATTACCACTTCATAC+TGG - chr5_3:52085415-52085434 None:intergenic 30.0%
ATGAAGTGGTAATCAATAGA+TGG + chr5_3:52085417-52085436 Msa0817200:CDS 30.0%
! AAATGCACATAGAACGTTTT+AGG - chr5_3:52085476-52085495 None:intergenic 30.0%
! GTATATTTCCCTTTTCATTC+TGG + chr5_3:52085564-52085583 Msa0817200:intron 30.0%
TTTGGTATGCTATCTTTCAA+AGG - chr5_3:52085659-52085678 None:intergenic 30.0%
! AACAATTTGTTTCATCCAGT+TGG + chr5_3:52085827-52085846 Msa0817200:intron 30.0%
! ACAATTTGTTTCATCCAGTT+GGG + chr5_3:52085828-52085847 Msa0817200:intron 30.0%
ATATAGAGCCAACATGAATA+GGG - chr5_3:52086074-52086093 None:intergenic 30.0%
GACATATTGCTATGAAGATT+TGG - chr5_3:52086273-52086292 None:intergenic 30.0%
!!! TTTTGAAATTTCTAGAAGGG+AGG + chr5_3:52086451-52086470 Msa0817200:CDS 30.0%
GGAGGAAAGAAAATAGAATA+TGG + chr5_3:52086469-52086488 Msa0817200:CDS 30.0%
ACACAAGAAAAAGACAACAT+AGG - chr5_3:52086546-52086565 None:intergenic 30.0%
CATTCCTTTACAAAAGTGAT+AGG - chr5_3:52087093-52087112 None:intergenic 30.0%
ACTTCTCCGAACTCAAAAAA+AGG + chr5_3:52079035-52079054 Msa0817200:five_prime_UTR 35.0%
AGAAAGAAGGTTAAGTTAGG+TGG - chr5_3:52079118-52079137 None:intergenic 35.0%
!!! GGTGATTTTTTCTCAGTTAG+AGG - chr5_3:52079363-52079382 None:intergenic 35.0%
GTTATTATTGGAAAGGGTTG+TGG - chr5_3:52079409-52079428 None:intergenic 35.0%
AAGATGGAGATTTAGGAGTA+AGG - chr5_3:52079431-52079450 None:intergenic 35.0%
TCATCATAGCATTGTGCAAT+TGG - chr5_3:52079624-52079643 None:intergenic 35.0%
AATTGCACAATGCTATGATG+AGG + chr5_3:52079623-52079642 Msa0817200:CDS 35.0%
GAGGAACAGTTATTTGGATT+TGG + chr5_3:52079642-52079661 Msa0817200:CDS 35.0%
AGATTTACTGATGGAGAGTT+AGG + chr5_3:52079768-52079787 Msa0817200:CDS 35.0%
TCACCATCAACAAATATAGG+AGG - chr5_3:52079921-52079940 None:intergenic 35.0%
CCTTCACCATCAACAAATAT+AGG - chr5_3:52079924-52079943 None:intergenic 35.0%
!! CCTATATTTGTTGATGGTGA+AGG + chr5_3:52079921-52079940 Msa0817200:CDS 35.0%
GATTCTGTGAATTGTGATGA+TGG + chr5_3:52080029-52080048 Msa0817200:CDS 35.0%
TACCTTTCAGCAACAGTATT+AGG - chr5_3:52080089-52080108 None:intergenic 35.0%
!! ACTCATCTTTTAGAAACTCC+GGG - chr5_3:52080939-52080958 None:intergenic 35.0%
!! CACTCATCTTTTAGAAACTC+CGG - chr5_3:52080940-52080959 None:intergenic 35.0%
! GTTTCTAAAAGATGAGTGTC+TGG + chr5_3:52080942-52080961 Msa0817200:CDS 35.0%
GACAATGAATGAAGCCAAAT+AGG - chr5_3:52081015-52081034 None:intergenic 35.0%
CTTGCTTATACATTGATCCT+CGG - chr5_3:52081463-52081482 None:intergenic 35.0%
GGATCAATGTATAAGCAAGT+TGG + chr5_3:52081464-52081483 Msa0817200:CDS 35.0%
! AATGTATAAGCAAGTTGGGA+TGG + chr5_3:52081469-52081488 Msa0817200:CDS 35.0%
!! CTGTATACCACTTTTCACAA+GGG - chr5_3:52081516-52081535 None:intergenic 35.0%
!! ACTGTATACCACTTTTCACA+AGG - chr5_3:52081517-52081536 None:intergenic 35.0%
AAGTGGTATACAGTCTATGA+AGG + chr5_3:52081523-52081542 Msa0817200:CDS 35.0%
AGAAGGTTAGTGCATATTTG+AGG + chr5_3:52081568-52081587 Msa0817200:intron 35.0%
CTCAACTTATCAGCTATGAA+TGG - chr5_3:52081623-52081642 None:intergenic 35.0%
AGTTGGATCAAACAATGCAT+TGG - chr5_3:52081728-52081747 None:intergenic 35.0%
! AGAAGTCCAAGATTCTAAGA+AGG + chr5_3:52082281-52082300 Msa0817200:CDS 35.0%
AAGGTAAGAAATTGGAATCC+TGG - chr5_3:52082322-52082341 None:intergenic 35.0%
ATATGCAGAGTGACAGAATT+CGG + chr5_3:52082448-52082467 Msa0817200:intron 35.0%
! ATTGGAAGTACAATGACAAG+TGG + chr5_3:52082525-52082544 Msa0817200:CDS 35.0%
AAAAAAGTTACACGGCATCA+AGG + chr5_3:52082684-52082703 Msa0817200:intron 35.0%
CAACATTTACCCTCAGAAAT+AGG - chr5_3:52082770-52082789 None:intergenic 35.0%
ACCCAAGTAAAACTACTCAT+AGG - chr5_3:52082908-52082927 None:intergenic 35.0%
!! AGGATTATGTTGGTGGTTAT+TGG - chr5_3:52082936-52082955 None:intergenic 35.0%
AAAGCAGGAAAGGATTATGT+TGG - chr5_3:52082946-52082965 None:intergenic 35.0%
TCAAACTCAGAATGAAAAGC+AGG - chr5_3:52082961-52082980 None:intergenic 35.0%
AGCCTATGATATATTGTTGG+AGG + chr5_3:52083045-52083064 Msa0817200:CDS 35.0%
GCCTATGATATATTGTTGGA+GGG + chr5_3:52083046-52083065 Msa0817200:CDS 35.0%
ACCCTCCAACAATATATCAT+AGG - chr5_3:52083050-52083069 None:intergenic 35.0%
CCGATTCATATGCTAAATTG+AGG + chr5_3:52083164-52083183 Msa0817200:CDS 35.0%
TGAGGTAGTTGAATATCATC+TGG + chr5_3:52083182-52083201 Msa0817200:intron 35.0%
ATATCTACAAGAAGACCACA+AGG - chr5_3:52083294-52083313 None:intergenic 35.0%
! GTTAGGATATAAGGACTAGT+TGG + chr5_3:52083558-52083577 Msa0817200:intron 35.0%
GGAGAAATCCTTTGTAGATA+AGG + chr5_3:52083662-52083681 Msa0817200:intron 35.0%
!! CTCACAGAGAAGTATACTTT+TGG + chr5_3:52083949-52083968 Msa0817200:intron 35.0%
AAATGATCGGTTAAACCTGT+TGG - chr5_3:52084046-52084065 None:intergenic 35.0%
! ACAGGTTTAACCGATCATTT+TGG + chr5_3:52084046-52084065 Msa0817200:CDS 35.0%
AGATGCTAGACCAAAATGAT+CGG - chr5_3:52084059-52084078 None:intergenic 35.0%
TATTCTACAGAACTATCTGC+AGG + chr5_3:52084159-52084178 Msa0817200:CDS 35.0%
AATGTAACTGAGCCTTGAAA+AGG + chr5_3:52084226-52084245 Msa0817200:intron 35.0%
! GGTATCACTAAACCTTTTCA+AGG - chr5_3:52084241-52084260 None:intergenic 35.0%
ATGATCCAGAAGACTTTATG+AGG - chr5_3:52084309-52084328 None:intergenic 35.0%
AAGGTGTAGAAAACACATGA+TGG + chr5_3:52084409-52084428 Msa0817200:CDS 35.0%
GAATTGTAGCCAAAATACCT+GGG - chr5_3:52084602-52084621 None:intergenic 35.0%
AGAATTGTAGCCAAAATACC+TGG - chr5_3:52084603-52084622 None:intergenic 35.0%
ATCTCGAGTCATGGAATATA+AGG + chr5_3:52084997-52085016 Msa0817200:CDS 35.0%
GTCATTTGTTTGTAAGAAGG+AGG - chr5_3:52085305-52085324 None:intergenic 35.0%
CAACTTAATCCAGTATGAAG+TGG + chr5_3:52085403-52085422 Msa0817200:CDS 35.0%
!! TCCAAATACAAGGAGTATTG+AGG - chr5_3:52085443-52085462 None:intergenic 35.0%
! ATTTCCCTTTTCATTCTGGA+AGG + chr5_3:52085568-52085587 Msa0817200:intron 35.0%
CAGAGATAACTTACTTGGTT+AGG - chr5_3:52085743-52085762 None:intergenic 35.0%
TGTTCAAGAATATACCCAAC+TGG - chr5_3:52085845-52085864 None:intergenic 35.0%
TATTCTTGAACACCATCAAG+AGG + chr5_3:52085853-52085872 Msa0817200:CDS 35.0%
TGGAAGACATCCTAAATTCA+TGG + chr5_3:52085901-52085920 Msa0817200:CDS 35.0%
GGAAGACATCCTAAATTCAT+GGG + chr5_3:52085902-52085921 Msa0817200:CDS 35.0%
ATGGGAGATAAGAAGTTGTT+TGG + chr5_3:52085942-52085961 Msa0817200:CDS 35.0%
TTGTTTGGAGAGCAAATGAA+TGG + chr5_3:52085957-52085976 Msa0817200:CDS 35.0%
TATAGAGCCAACATGAATAG+GGG - chr5_3:52086073-52086092 None:intergenic 35.0%
GATATAGAGCCAACATGAAT+AGG - chr5_3:52086075-52086094 None:intergenic 35.0%
CCTTGAATCTGAACAATTTG+TGG - chr5_3:52086112-52086131 None:intergenic 35.0%
CCACAAATTGTTCAGATTCA+AGG + chr5_3:52086109-52086128 Msa0817200:intron 35.0%
! TTCAAGGTAATAAGAGCACA+CGG + chr5_3:52086125-52086144 Msa0817200:CDS 35.0%
TATTGCTATGAAGATTTGGC+TGG - chr5_3:52086269-52086288 None:intergenic 35.0%
ATCTTCATAGCAATATGTCG+TGG + chr5_3:52086274-52086293 Msa0817200:CDS 35.0%
TCTCAGATGCAAAGATTAAG+AGG + chr5_3:52086676-52086695 Msa0817200:CDS 35.0%
!! AAAAGTGTTCTCGCTTGTAA+AGG + chr5_3:52086925-52086944 Msa0817200:three_prime_UTR 35.0%
! AAAGTGTTCTCGCTTGTAAA+GGG + chr5_3:52086926-52086945 Msa0817200:three_prime_UTR 35.0%
TCGCTTGTAAAGGGAAAATT+AGG + chr5_3:52086935-52086954 Msa0817200:three_prime_UTR 35.0%
CGCTTGTAAAGGGAAAATTA+GGG + chr5_3:52086936-52086955 Msa0817200:three_prime_UTR 35.0%
TTCTTGTTGGCAAATGCTAT+GGG - chr5_3:52086977-52086996 None:intergenic 35.0%
TTTCTTGTTGGCAAATGCTA+TGG - chr5_3:52086978-52086997 None:intergenic 35.0%
CACTCTTATTGGTAAGAGAT+TGG - chr5_3:52087066-52087085 None:intergenic 35.0%
CAATCTCTTACCAATAAGAG+TGG + chr5_3:52087064-52087083 Msa0817200:three_prime_UTR 35.0%
!! GTACCCTATCACTTTTGTAA+AGG + chr5_3:52087086-52087105 Msa0817200:three_prime_UTR 35.0%
CGGAGAAGTAGAAGAATCAA+TGG - chr5_3:52079024-52079043 None:intergenic 40.0%
TGGTTACCTTGTTGATCCAT+TGG - chr5_3:52079098-52079117 None:intergenic 40.0%
AAAAGTGGTGATCTAGGAAG+AGG - chr5_3:52079384-52079403 None:intergenic 40.0%
GGAGGTAAAGATGGAGATTT+AGG - chr5_3:52079438-52079457 None:intergenic 40.0%
!! ACCTAGTGGAATTTTGAGGA+AGG + chr5_3:52079692-52079711 Msa0817200:CDS 40.0%
!! CCTAGTGGAATTTTGAGGAA+GGG + chr5_3:52079693-52079712 Msa0817200:CDS 40.0%
!! TGGAATTTTGAGGAAGGGTT+TGG + chr5_3:52079698-52079717 Msa0817200:CDS 40.0%
CAGAAGAAAATGACTCCATG+TGG + chr5_3:52079807-52079826 Msa0817200:CDS 40.0%
ACTCCATGTGGAAGTGAAAT+TGG + chr5_3:52079819-52079838 Msa0817200:CDS 40.0%
GTACCAATTTCACTTCCACA+TGG - chr5_3:52079825-52079844 None:intergenic 40.0%
AAATTGGTACTGCTGGAAGA+GGG + chr5_3:52079835-52079854 Msa0817200:CDS 40.0%
!! ACAAATATAGGAGGAGCACT+TGG - chr5_3:52079912-52079931 None:intergenic 40.0%
! GCTCCTCCTATATTTGTTGA+TGG + chr5_3:52079915-52079934 Msa0817200:CDS 40.0%
! TGAAGGTGATGTCGGTTATT+CGG + chr5_3:52079938-52079957 Msa0817200:CDS 40.0%
!! TCTGTGAATTGTGATGATGG+AGG + chr5_3:52080032-52080051 Msa0817200:CDS 40.0%
TGCCTAATACTGTTGCTGAA+AGG + chr5_3:52080084-52080103 Msa0817200:CDS 40.0%
!! GTGTTACTTTCCATGAAGCA+CGG + chr5_3:52080145-52080164 Msa0817200:intron 40.0%
ATGAAGCACGGACACAAAAT+CGG + chr5_3:52080157-52080176 Msa0817200:intron 40.0%
TTCAATGTAATCGTCGGTGT+CGG + chr5_3:52080225-52080244 Msa0817200:intron 40.0%
TCAAGAAACAACCTCTACAC+AGG + chr5_3:52080370-52080389 Msa0817200:CDS 40.0%
CAAGAAACAACCTCTACACA+GGG + chr5_3:52080371-52080390 Msa0817200:CDS 40.0%
TTGAGATATTGCAAGTGTGG+AGG - chr5_3:52080416-52080435 None:intergenic 40.0%
GAAAACCTGCATCATAAGAG+TGG - chr5_3:52080687-52080706 None:intergenic 40.0%
!! CTCATCTTTTAGAAACTCCG+GGG - chr5_3:52080938-52080957 None:intergenic 40.0%
ACCAAATGAAACCTACCCAA+AGG - chr5_3:52080980-52080999 None:intergenic 40.0%
TTCCTTGTACTACCTTCAGT+TGG - chr5_3:52081118-52081137 None:intergenic 40.0%
ACAACCTTCTTTGTCTTGAG+AGG - chr5_3:52081157-52081176 None:intergenic 40.0%
TCTCAAGACAAAGAAGGTTG+TGG + chr5_3:52081156-52081175 Msa0817200:CDS 40.0%
CTCAAGACAAAGAAGGTTGT+GGG + chr5_3:52081157-52081176 Msa0817200:CDS 40.0%
TCAAGACAAAGAAGGTTGTG+GGG + chr5_3:52081158-52081177 Msa0817200:CDS 40.0%
TACATATATGCGCACGTGTT+TGG - chr5_3:52081291-52081310 None:intergenic 40.0%
GTTTCATCCCTTGTGAAAAG+TGG + chr5_3:52081506-52081525 Msa0817200:CDS 40.0%
GGTTAGTGCATATTTGAGGA+AGG + chr5_3:52081572-52081591 Msa0817200:intron 40.0%
CATGATAATCTCCACTTCCA+GGG - chr5_3:52081805-52081824 None:intergenic 40.0%
TCATGATAATCTCCACTTCC+AGG - chr5_3:52081806-52081825 None:intergenic 40.0%
ATGGTGTAAAGGGAAAGAAG+AGG - chr5_3:52082397-52082416 None:intergenic 40.0%
TTGTACTTCCAATTGAGAGC+TGG - chr5_3:52082518-52082537 None:intergenic 40.0%
! TCATCTTCCAAGTTGACAAC+TGG + chr5_3:52082650-52082669 Msa0817200:intron 40.0%
TCTTTGTCCAGTTGTCAACT+TGG - chr5_3:52082660-52082679 None:intergenic 40.0%
ACGGCATCAAGGATTATAGA+TGG + chr5_3:52082695-52082714 Msa0817200:intron 40.0%
CTGAGGGTAAATGTTGTTGA+TGG + chr5_3:52082774-52082793 Msa0817200:intron 40.0%
! GGTAAATGTTGTTGATGGAG+AGG + chr5_3:52082779-52082798 Msa0817200:intron 40.0%
AACTAACAAGTCCTCTCGAT+CGG - chr5_3:52082874-52082893 None:intergenic 40.0%
CTCAGAATGAAAAGCAGGAA+AGG - chr5_3:52082956-52082975 None:intergenic 40.0%
CTGCAGTGTATGCAAAAACA+GGG - chr5_3:52083002-52083021 None:intergenic 40.0%
TCTGCAGTGTATGCAAAAAC+AGG - chr5_3:52083003-52083022 None:intergenic 40.0%
GCATCTAACAACCATTTCCA+TGG - chr5_3:52083121-52083140 None:intergenic 40.0%
! GATGCATTTGCTGACTACTA+TGG + chr5_3:52083136-52083155 Msa0817200:CDS 40.0%
GTTACTTGATCCCCTAATGA+AGG + chr5_3:52083373-52083392 Msa0817200:CDS 40.0%
TCTGTACATTGACGAATTCG+TGG + chr5_3:52083636-52083655 Msa0817200:intron 40.0%
ACATTGACGAATTCGTGGAT+AGG + chr5_3:52083641-52083660 Msa0817200:intron 40.0%
TGGTTTCCCCTTATCTACAA+AGG - chr5_3:52083673-52083692 None:intergenic 40.0%
TGTAGATAAGGGGAAACCAT+TGG + chr5_3:52083674-52083693 Msa0817200:intron 40.0%
GCAAATCCCAAAGTAACTCA+AGG - chr5_3:52083900-52083919 None:intergenic 40.0%
!! ATACCTTCTGCTGGTTTATG+AGG + chr5_3:52084256-52084275 Msa0817200:intron 40.0%
TACCTCCTCATAAAGTCTTC+TGG + chr5_3:52084301-52084320 Msa0817200:intron 40.0%
ATCCAGAAGACTTTATGAGG+AGG - chr5_3:52084306-52084325 None:intergenic 40.0%
GGAGACTGATGAATTTGTGT+CGG + chr5_3:52084430-52084449 Msa0817200:CDS 40.0%
GAGACTGATGAATTTGTGTC+GGG + chr5_3:52084431-52084450 Msa0817200:CDS 40.0%
TGCCTCAGAAAGTTACCAAA+TGG + chr5_3:52084454-52084473 Msa0817200:CDS 40.0%
! GTCCATTTGGTAACTTTCTG+AGG - chr5_3:52084459-52084478 None:intergenic 40.0%
! AGATGGTAATGCTGTCCATT+TGG - chr5_3:52084472-52084491 None:intergenic 40.0%
! GCTGACCATGGATTGTATTA+TGG - chr5_3:52084571-52084590 None:intergenic 40.0%
TGGGAAAAATATGCTGACCA+TGG - chr5_3:52084583-52084602 None:intergenic 40.0%
! ATGGTCAGCATATTTTTCCC+AGG + chr5_3:52084582-52084601 Msa0817200:CDS 40.0%
ACACAGCTCTGTGCTATAAA+TGG - chr5_3:52084883-52084902 None:intergenic 40.0%
ATAGCACAGAGCTGTGTAAA+AGG + chr5_3:52084886-52084905 Msa0817200:CDS 40.0%
TGAGAACTTTCCTTTCTGCA+TGG + chr5_3:52084910-52084929 Msa0817200:CDS 40.0%
ACTAGAAGCTCATTCACATG+TGG - chr5_3:52084954-52084973 None:intergenic 40.0%
ACATGTGAATGAGCTTCTAG+TGG + chr5_3:52084953-52084972 Msa0817200:CDS 40.0%
TTCATGTTTCAGTTCTGTGC+AGG + chr5_3:52085115-52085134 Msa0817200:intron 40.0%
TCATGTTTCAGTTCTGTGCA+GGG + chr5_3:52085116-52085135 Msa0817200:intron 40.0%
AACAAATGACACAGGTTCCA+TGG + chr5_3:52085315-52085334 Msa0817200:intron 40.0%
ACAAATGACACAGGTTCCAT+GGG + chr5_3:52085316-52085335 Msa0817200:intron 40.0%
TGGTGAAGTGGAATGATTTG+TGG - chr5_3:52085351-52085370 None:intergenic 40.0%
TTTCTCAGCAAATGGTGAAG+TGG - chr5_3:52085363-52085382 None:intergenic 40.0%
GCCTCAATACTCCTTGTATT+TGG + chr5_3:52085439-52085458 Msa0817200:CDS 40.0%
ACAGCCTTCCAGAATGAAAA+GGG - chr5_3:52085575-52085594 None:intergenic 40.0%
AGGCTGTGGCAAATATTGAA+AGG + chr5_3:52085588-52085607 Msa0817200:intron 40.0%
GGCTGTGGCAAATATTGAAA+GGG + chr5_3:52085589-52085608 Msa0817200:intron 40.0%
ACTTGCAAGTGAAGTCTCTT+TGG - chr5_3:52085677-52085696 None:intergenic 40.0%
GCATGCAGAGATAACTTACT+TGG - chr5_3:52085748-52085767 None:intergenic 40.0%
GACATCAAGTATCCTCTTGA+TGG - chr5_3:52085868-52085887 None:intergenic 40.0%
TGATGTCCTACATTGTAGAG+TGG + chr5_3:52085881-52085900 Msa0817200:CDS 40.0%
TGTCTTCCACTCTACAATGT+AGG - chr5_3:52085890-52085909 None:intergenic 40.0%
AACTTCTTATCTCCCATGAC+AGG - chr5_3:52085939-52085958 None:intergenic 40.0%
!! GTATCTGGTTCTCAGTAACA+CGG - chr5_3:52085988-52086007 None:intergenic 40.0%
TAAGACTCCCCTATTCATGT+TGG + chr5_3:52086063-52086082 Msa0817200:intron 40.0%
! TAGCAATATGTCGTGGATTG+TGG + chr5_3:52086281-52086300 Msa0817200:CDS 40.0%
! AGCAATATGTCGTGGATTGT+GGG + chr5_3:52086282-52086301 Msa0817200:CDS 40.0%
AGTTTCCTTCACGAAGAGTA+TGG + chr5_3:52087026-52087045 Msa0817200:three_prime_UTR 40.0%
! TGATAGGGTACCACTCTTAT+TGG - chr5_3:52087077-52087096 None:intergenic 40.0%
TGGATGAAACTGCACTCCAA+TGG + chr5_3:52079079-52079098 Msa0817200:CDS 45.0%
TGCACTCCAATGGATCAACA+AGG + chr5_3:52079089-52079108 Msa0817200:CDS 45.0%
!!! CCACTAGGTTTTAGGGGTTT+AGG - chr5_3:52079681-52079700 None:intergenic 45.0%
CCTAAACCCCTAAAACCTAG+TGG + chr5_3:52079678-52079697 Msa0817200:CDS 45.0%
CCCTTCCTCAAAATTCCACT+AGG - chr5_3:52079696-52079715 None:intergenic 45.0%
GGAAGTGAAATTGGTACTGC+TGG + chr5_3:52079828-52079847 Msa0817200:CDS 45.0%
GAAATTGGTACTGCTGGAAG+AGG + chr5_3:52079834-52079853 Msa0817200:CDS 45.0%
AATTGGTACTGCTGGAAGAG+GGG + chr5_3:52079836-52079855 Msa0817200:CDS 45.0%
!! GTTGATGGTGAAGGTGATGT+CGG + chr5_3:52079930-52079949 Msa0817200:CDS 45.0%
!! TTCATCGACTTGATTCGCCA+CGG - chr5_3:52079970-52079989 None:intergenic 45.0%
AAATGACTCAGCAGCAGGAT+AGG + chr5_3:52079988-52080007 Msa0817200:CDS 45.0%
!! GTGAATTGTGATGATGGAGG+AGG + chr5_3:52080035-52080054 Msa0817200:CDS 45.0%
! GATTTTGTGTCCGTGCTTCA+TGG - chr5_3:52080158-52080177 None:intergenic 45.0%
TTCTTGCATTAGACGTGTCC+TGG - chr5_3:52080270-52080289 None:intergenic 45.0%
GAAGTGTGTGTGTGCTTCAT+AGG + chr5_3:52080287-52080306 Msa0817200:intron 45.0%
TCTTTCTATGCCCTGTGTAG+AGG - chr5_3:52080384-52080403 None:intergenic 45.0%
TACACAGGGCATAGAAAGAC+AGG + chr5_3:52080385-52080404 Msa0817200:CDS 45.0%
AGATATTGCAAGTGTGGAGG+AGG - chr5_3:52080413-52080432 None:intergenic 45.0%
AGTTGCCACTCTTATGATGC+AGG + chr5_3:52080679-52080698 Msa0817200:intron 45.0%
GTTGCAATAGTCAAGATGCC+TGG + chr5_3:52080842-52080861 Msa0817200:CDS 45.0%
GTAAGTGATAAGGGTTTGCC+AGG - chr5_3:52080863-52080882 None:intergenic 45.0%
GCCTTTGGGTAGGTTTCATT+TGG + chr5_3:52080976-52080995 Msa0817200:intron 45.0%
!! TCAGTTGGCTTTATACCTCG+AGG - chr5_3:52081103-52081122 None:intergenic 45.0%
CGAGGTATAAAGCCAACTGA+AGG + chr5_3:52081103-52081122 Msa0817200:CDS 45.0%
AGCCAACTGAAGGTAGTACA+AGG + chr5_3:52081113-52081132 Msa0817200:CDS 45.0%
AGTGCCTCTCAAGACAAAGA+AGG + chr5_3:52081150-52081169 Msa0817200:CDS 45.0%
GGTTGTGGGGAAAATAAGAG+TGG + chr5_3:52081171-52081190 Msa0817200:CDS 45.0%
GTGGGGAAAATAAGAGTGGA+AGG + chr5_3:52081175-52081194 Msa0817200:CDS 45.0%
! TATGCGCACGTGTTTGGAAT+TGG - chr5_3:52081285-52081304 None:intergenic 45.0%
!! AAGGGCACATTTTCAAACCG+AGG + chr5_3:52081443-52081462 Msa0817200:CDS 45.0%
TCACTCTCAGTGACAGAAGA+AGG + chr5_3:52081551-52081570 Msa0817200:CDS 45.0%
CTTCTGTTGCACTCTTGAGT+TGG - chr5_3:52081745-52081764 None:intergenic 45.0%
! ATTTTTCTTCGCCCTGGAAG+TGG + chr5_3:52081791-52081810 Msa0817200:CDS 45.0%
TGTCGAAGAAAGGTTACACG+AGG + chr5_3:52082094-52082113 Msa0817200:intron 45.0%
GTCGAAGAAAGGTTACACGA+GGG + chr5_3:52082095-52082114 Msa0817200:intron 45.0%
TTCAGTTTCCCATTGAGCCA+AGG + chr5_3:52082243-52082262 Msa0817200:intron 45.0%
TCAGTTTCCCATTGAGCCAA+GGG + chr5_3:52082244-52082263 Msa0817200:intron 45.0%
! CTACCAATAAAGCATCCCCT+TGG - chr5_3:52082263-52082282 None:intergenic 45.0%
GGACTGCCTTCTTAGAATCT+TGG - chr5_3:52082290-52082309 None:intergenic 45.0%
! GATTCTAAGAAGGCAGTCCA+TGG + chr5_3:52082291-52082310 Msa0817200:CDS 45.0%
GCAGGAAAGGATTATGTTGG+TGG - chr5_3:52082943-52082962 None:intergenic 45.0%
TAGGCTTGAGTTTCCACAAC+AGG - chr5_3:52083031-52083050 None:intergenic 45.0%
TCATCTGGATTCCCCTAACA+AGG + chr5_3:52083197-52083216 Msa0817200:intron 45.0%
TTGAACCTTCGCTTACCTTG+TGG + chr5_3:52083276-52083295 Msa0817200:intron 45.0%
GAATGTAGCAACTCCAACCA+AGG + chr5_3:52083328-52083347 Msa0817200:CDS 45.0%
GTAACTCTTTCACAAGCTCC+AGG - chr5_3:52083358-52083377 None:intergenic 45.0%
! TCACTTCTGGCCTTCATTAG+GGG - chr5_3:52083386-52083405 None:intergenic 45.0%
! CTCACTTCTGGCCTTCATTA+GGG - chr5_3:52083387-52083406 None:intergenic 45.0%
! TCTCACTTCTGGCCTTCATT+AGG - chr5_3:52083388-52083407 None:intergenic 45.0%
AGTCAGACTTCTCTCACTTC+TGG - chr5_3:52083399-52083418 None:intergenic 45.0%
GAAGTGAGAGAAGTCTGACT+AGG + chr5_3:52083399-52083418 Msa0817200:CDS 45.0%
CTTGATGAAAACTCGCCAAC+AGG + chr5_3:52084028-52084047 Msa0817200:CDS 45.0%
TGTAGAGCAGGATGTAAAGC+TGG - chr5_3:52084094-52084113 None:intergenic 45.0%
CTACTGTAGACTTGTAGAGC+AGG - chr5_3:52084106-52084125 None:intergenic 45.0%
GGTTTAGTGATACCTTCTGC+TGG + chr5_3:52084247-52084266 Msa0817200:intron 45.0%
GAACCTCATAAACCAGCAGA+AGG - chr5_3:52084262-52084281 None:intergenic 45.0%
GACAGACTGCAGCAAGAAAA+AGG + chr5_3:52084390-52084409 Msa0817200:intron 45.0%
GGACAGCATTACCATCTCAA+CGG + chr5_3:52084475-52084494 Msa0817200:CDS 45.0%
GCTGTATTTAGTGGTGCAAG+AGG - chr5_3:52085043-52085062 None:intergenic 45.0%
CACAGCCTTCCAGAATGAAA+AGG - chr5_3:52085576-52085595 None:intergenic 45.0%
!! CTTTTCATTCTGGAAGGCTG+TGG + chr5_3:52085574-52085593 Msa0817200:intron 45.0%
GACAGGATGCCCATGAATTT+AGG - chr5_3:52085914-52085933 None:intergenic 45.0%
ACGGCTGAAAAAGATGCTTG+AGG + chr5_3:52086144-52086163 Msa0817200:CDS 45.0%
GAGAAGCAGAAGTTCGTGAA+AGG + chr5_3:52086185-52086204 Msa0817200:CDS 45.0%
CTTCATCTCCAACCTTCATG+AGG + chr5_3:52086237-52086256 Msa0817200:CDS 45.0%
GGTAAAGACCTCATGAAGGT+TGG - chr5_3:52086248-52086267 None:intergenic 45.0%
AATGGATCTTGCTACGCTCT+TGG + chr5_3:52086495-52086514 Msa0817200:CDS 45.0%
ATGGATCTTGCTACGCTCTT+GGG + chr5_3:52086496-52086515 Msa0817200:CDS 45.0%
! GCTATGGGAATAGCCTTTTG+CGG - chr5_3:52086962-52086981 None:intergenic 45.0%
CTTTGCCATACTCTTCGTGA+AGG - chr5_3:52087034-52087053 None:intergenic 45.0%
!! AAAAAAATATTAATCAAAAA+AGG - chr5_3:52079278-52079297 None:intergenic 5.0%
!! TTATATATCTAAAAATAAAA+TGG + chr5_3:52085278-52085297 Msa0817200:intron 5.0%
CCACCTATTGCGATTCGATC+CGG + chr5_3:52079187-52079206 Msa0817200:intron 50.0%
TCGAGAATAATCCCTCGAGC+CGG - chr5_3:52079209-52079228 None:intergenic 50.0%
TCGAGGGATTATTCTCGAGC+AGG + chr5_3:52079211-52079230 Msa0817200:intron 50.0%
GTGGCGAAAAGTGGTGATCT+AGG - chr5_3:52079390-52079409 None:intergenic 50.0%
GAAAGGGTTGTGGCGAAAAG+TGG - chr5_3:52079399-52079418 None:intergenic 50.0%
CCTCGTAGTAACCTCGCTTT+CGG + chr5_3:52079483-52079502 Msa0817200:CDS 50.0%
GATCGTTGAATCCGAAAGCG+AGG - chr5_3:52079497-52079516 None:intergenic 50.0%
! GGTGATGTCGGTTATTCGGA+AGG + chr5_3:52079942-52079961 Msa0817200:CDS 50.0%
CGATGAAATGACTCAGCAGC+AGG + chr5_3:52079983-52080002 Msa0817200:CDS 50.0%
CACTAATGCATGTCTGCACC+AGG + chr5_3:52080249-52080268 Msa0817200:intron 50.0%
! GCAGGCGTCGTAAGTGATAA+GGG - chr5_3:52080872-52080891 None:intergenic 50.0%
! TGCAGGCGTCGTAAGTGATA+AGG - chr5_3:52080873-52080892 None:intergenic 50.0%
TTGCAGGCATAGACGAATGC+AGG - chr5_3:52080890-52080909 None:intergenic 50.0%
TTCGTCTATGCCTGCAAGCA+TGG + chr5_3:52080893-52080912 Msa0817200:CDS 50.0%
TCGTCTATGCCTGCAAGCAT+GGG + chr5_3:52080894-52080913 Msa0817200:CDS 50.0%
! TGGCTCTTCGAAGTGCCTTT+GGG + chr5_3:52080962-52080981 Msa0817200:CDS 50.0%
! TCTTCGAAGTGCCTTTGGGT+AGG + chr5_3:52080966-52080985 Msa0817200:intron 50.0%
GAGTTCTTGTTGCAACCTCG+AGG + chr5_3:52081085-52081104 Msa0817200:CDS 50.0%
AAGTTGGGATGGAGTACGTC+AGG + chr5_3:52081480-52081499 Msa0817200:CDS 50.0%
! TCGGCAATTTTTCTTCGCCC+TGG + chr5_3:52081785-52081804 Msa0817200:CDS 50.0%
CAGTTTCCCATTGAGCCAAG+GGG + chr5_3:52082245-52082264 Msa0817200:intron 50.0%
AAGCATCCCCTTGGCTCAAT+GGG - chr5_3:52082254-52082273 None:intergenic 50.0%
! AAAGCATCCCCTTGGCTCAA+TGG - chr5_3:52082255-52082274 None:intergenic 50.0%
GAGCCAAGGGGATGCTTTAT+TGG + chr5_3:52082257-52082276 Msa0817200:CDS 50.0%
TTGGAATCCTGGCTTCACCA+TGG - chr5_3:52082311-52082330 None:intergenic 50.0%
TGCAGAGTGACAGAATTCGG+TGG + chr5_3:52082451-52082470 Msa0817200:intron 50.0%
! AGAGTGACAGAATTCGGTGG+TGG + chr5_3:52082454-52082473 Msa0817200:intron 50.0%
! GAGTGACAGAATTCGGTGGT+GGG + chr5_3:52082455-52082474 Msa0817200:intron 50.0%
GGCAAGATCCAGCTCTCAAT+TGG + chr5_3:52082507-52082526 Msa0817200:CDS 50.0%
GTTTCCACTCCCGAAACTTG+CGG + chr5_3:52083086-52083105 Msa0817200:CDS 50.0%
TCCCGAAACTTGCGGCTAAA+TGG + chr5_3:52083094-52083113 Msa0817200:CDS 50.0%
CCCATTTAGCCGCAAGTTTC+GGG - chr5_3:52083098-52083117 None:intergenic 50.0%
CCCGAAACTTGCGGCTAAAT+GGG + chr5_3:52083095-52083114 Msa0817200:CDS 50.0%
GCCCATTTAGCCGCAAGTTT+CGG - chr5_3:52083099-52083118 None:intergenic 50.0%
GGCTAAATGGGCCATGGAAA+TGG + chr5_3:52083107-52083126 Msa0817200:CDS 50.0%
GAAGACCACAAGGTAAGCGA+AGG - chr5_3:52083284-52083303 None:intergenic 50.0%
GAGAAGTCTGACTAGGCAAG+AGG + chr5_3:52083406-52083425 Msa0817200:CDS 50.0%
GAGAGACATCTCTCAGCCAA+TGG - chr5_3:52083693-52083712 None:intergenic 50.0%
CTTCAGGTATGCCGTTGAGA+TGG - chr5_3:52084489-52084508 None:intergenic 50.0%
!! TTGATGGTGGCCATGCAGAA+AGG - chr5_3:52084923-52084942 None:intergenic 50.0%
ACATGTGGCTGTGGACTTGA+TGG - chr5_3:52084939-52084958 None:intergenic 50.0%
AGCTCATTCACATGTGGCTG+TGG - chr5_3:52084948-52084967 None:intergenic 50.0%
TTGAACGCGATCTCGAGTCA+TGG + chr5_3:52084988-52085007 Msa0817200:CDS 50.0%
TGTTTCAGTTCTGTGCAGGG+AGG + chr5_3:52085119-52085138 Msa0817200:intron 50.0%
TTTGTGGTTACTCCAGCCCA+TGG - chr5_3:52085335-52085354 None:intergenic 50.0%
GCATCCTGTCTACCTGTCAT+GGG + chr5_3:52085924-52085943 Msa0817200:CDS 50.0%
ATCTCCCATGACAGGTAGAC+AGG - chr5_3:52085931-52085950 None:intergenic 50.0%
GAGGAAACGAGAGAAGCAGA+TGG + chr5_3:52086163-52086182 Msa0817200:CDS 50.0%
GGCTGGTAAAGACCTCATGA+AGG - chr5_3:52086252-52086271 None:intergenic 50.0%
! TCGTGGATTGTGGGACAGAA+TGG + chr5_3:52086291-52086310 Msa0817200:CDS 50.0%
! CGTGGATTGTGGGACAGAAT+GGG + chr5_3:52086292-52086311 Msa0817200:CDS 50.0%
ATTGTGGGACAGAATGGGAC+AGG + chr5_3:52086297-52086316 Msa0817200:CDS 50.0%
TGGATCTTGCTACGCTCTTG+GGG + chr5_3:52086497-52086516 Msa0817200:CDS 50.0%
GGGAAAATTAGGGCCGCAAA+AGG + chr5_3:52086946-52086965 Msa0817200:three_prime_UTR 50.0%
CCGGATCGAATCGCAATAGG+TGG - chr5_3:52079190-52079209 None:intergenic 55.0%
GAGCCGGATCGAATCGCAAT+AGG - chr5_3:52079193-52079212 None:intergenic 55.0%
! CTCAGTTAGAGGAGAGCGTG+TGG - chr5_3:52079352-52079371 None:intergenic 55.0%
CCGAAAGCGAGGTTACTACG+AGG - chr5_3:52079486-52079505 None:intergenic 55.0%
GTACTGCTGGAAGAGGGGTT+CGG + chr5_3:52079841-52079860 Msa0817200:CDS 55.0%
CGGTTATTCGGAAGGATCCG+TGG + chr5_3:52079950-52079969 Msa0817200:CDS 55.0%
TGACTCAGCAGCAGGATAGG+AGG + chr5_3:52079991-52080010 Msa0817200:CDS 55.0%
AGCAGCAGGATAGGAGGTCT+TGG + chr5_3:52079997-52080016 Msa0817200:CDS 55.0%
ATGGGCAAGAGGCTGTACTG+AGG + chr5_3:52080912-52080931 Msa0817200:CDS 55.0%
! CTGGCTCTTCGAAGTGCCTT+TGG + chr5_3:52080961-52080980 Msa0817200:CDS 55.0%
! GCAGCAGAGAGAGCACATAC+AGG - chr5_3:52082354-52082373 None:intergenic 55.0%
TCCAGTTCGATCCGATCGAG+AGG + chr5_3:52082860-52082879 Msa0817200:intron 55.0%
TCCTCTCGATCGGATCGAAC+TGG - chr5_3:52082864-52082883 None:intergenic 55.0%
! ACTGCAGAGTGCTCCTGTTG+TGG + chr5_3:52083015-52083034 Msa0817200:intron 55.0%
TTAGCCGCAAGTTTCGGGAG+TGG - chr5_3:52083093-52083112 None:intergenic 55.0%
ACTTGCGGCTAAATGGGCCA+TGG + chr5_3:52083101-52083120 Msa0817200:CDS 55.0%
AACTCCAACCAAGGACTGCC+TGG + chr5_3:52083337-52083356 Msa0817200:CDS 55.0%
AGCAGGATGTAAAGCTGGCG+CGG - chr5_3:52084089-52084108 None:intergenic 55.0%
TGTGGCTGTGGACTTGATGG+TGG - chr5_3:52084936-52084955 None:intergenic 55.0%
ATGACACAGGTTCCATGGGC+TGG + chr5_3:52085320-52085339 Msa0817200:intron 55.0%
GGCATCCTGTCTACCTGTCA+TGG + chr5_3:52085923-52085942 Msa0817200:CDS 55.0%
GCTTCAATCACTGAGCGAGG+AGG - chr5_3:52086730-52086749 None:intergenic 55.0%
CGAGCTTCAATCACTGAGCG+AGG - chr5_3:52086733-52086752 None:intergenic 55.0%
! TTGCGATTCGATCCGGCTCG+AGG + chr5_3:52079194-52079213 Msa0817200:intron 60.0%
! TGCGATTCGATCCGGCTCGA+GGG + chr5_3:52079195-52079214 Msa0817200:intron 60.0%
TCATCGGTCTCAGCTGCAGC+AGG - chr5_3:52079573-52079592 None:intergenic 60.0%
TGCCTGCAAGCATGGGCAAG+AGG + chr5_3:52080901-52080920 Msa0817200:CDS 60.0%
AGCCTCTTGCCCATGCTTGC+AGG - chr5_3:52080906-52080925 None:intergenic 60.0%
AAGAGGCTGTACTGAGGCCC+CGG + chr5_3:52080918-52080937 Msa0817200:CDS 60.0%
AGGCAGTCCATGGTGAAGCC+AGG + chr5_3:52082301-52082320 Msa0817200:CDS 60.0%
AGCTCCAGGCAGTCCTTGGT+TGG - chr5_3:52083344-52083363 None:intergenic 60.0%
CACAAGCTCCAGGCAGTCCT+TGG - chr5_3:52083348-52083367 None:intergenic 60.0%
GGTCTCAGCTGCAGCAGGAC+AGG - chr5_3:52079568-52079587 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 52079001 52087185 52079001 ID=Msa0817200;Name=Msa0817200
chr5_3 mRNA 52079001 52087185 52079001 ID=Msa0817200-mRNA-1;Parent=Msa0817200;Name=Msa0817200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=62|1|0.95|1|1|1|21|372|1192
chr5_3 exon 52079001 52079110 52079001 ID=Msa0817200-mRNA-1:exon:15633;Parent=Msa0817200-mRNA-1
chr5_3 exon 52079315 52080105 52079315 ID=Msa0817200-mRNA-1:exon:15634;Parent=Msa0817200-mRNA-1
chr5_3 exon 52080370 52080441 52080370 ID=Msa0817200-mRNA-1:exon:15635;Parent=Msa0817200-mRNA-1
chr5_3 exon 52080840 52080983 52080840 ID=Msa0817200-mRNA-1:exon:15636;Parent=Msa0817200-mRNA-1
chr5_3 exon 52081078 52081196 52081078 ID=Msa0817200-mRNA-1:exon:15637;Parent=Msa0817200-mRNA-1
chr5_3 exon 52081408 52081572 52081408 ID=Msa0817200-mRNA-1:exon:15638;Parent=Msa0817200-mRNA-1
chr5_3 exon 52081723 52081828 52081723 ID=Msa0817200-mRNA-1:exon:15639;Parent=Msa0817200-mRNA-1
chr5_3 exon 52082248 52082353 52082248 ID=Msa0817200-mRNA-1:exon:15640;Parent=Msa0817200-mRNA-1
chr5_3 exon 52082456 52082566 52082456 ID=Msa0817200-mRNA-1:exon:15641;Parent=Msa0817200-mRNA-1
chr5_3 exon 52083022 52083185 52083022 ID=Msa0817200-mRNA-1:exon:15642;Parent=Msa0817200-mRNA-1
chr5_3 exon 52083310 52083427 52083310 ID=Msa0817200-mRNA-1:exon:15643;Parent=Msa0817200-mRNA-1
chr5_3 exon 52083956 52084180 52083956 ID=Msa0817200-mRNA-1:exon:15644;Parent=Msa0817200-mRNA-1
chr5_3 exon 52084395 52084603 52084395 ID=Msa0817200-mRNA-1:exon:15645;Parent=Msa0817200-mRNA-1
chr5_3 exon 52084851 52085018 52084851 ID=Msa0817200-mRNA-1:exon:15646;Parent=Msa0817200-mRNA-1
chr5_3 exon 52085127 52085232 52085127 ID=Msa0817200-mRNA-1:exon:15647;Parent=Msa0817200-mRNA-1
chr5_3 exon 52085329 52085466 52085329 ID=Msa0817200-mRNA-1:exon:15648;Parent=Msa0817200-mRNA-1
chr5_3 exon 52085590 52085748 52085590 ID=Msa0817200-mRNA-1:exon:15649;Parent=Msa0817200-mRNA-1
chr5_3 exon 52085846 52086049 52085846 ID=Msa0817200-mRNA-1:exon:15650;Parent=Msa0817200-mRNA-1
chr5_3 exon 52086124 52086318 52086124 ID=Msa0817200-mRNA-1:exon:15651;Parent=Msa0817200-mRNA-1
chr5_3 exon 52086447 52086518 52086447 ID=Msa0817200-mRNA-1:exon:15652;Parent=Msa0817200-mRNA-1
chr5_3 exon 52086655 52087185 52086655 ID=Msa0817200-mRNA-1:exon:15653;Parent=Msa0817200-mRNA-1
chr5_3 five_prime_UTR 52079001 52079062 52079001 ID=Msa0817200-mRNA-1:five_prime_utr;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52079063 52079110 52079063 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52079315 52080105 52079315 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52080370 52080441 52080370 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52080840 52080983 52080840 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52081078 52081196 52081078 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52081408 52081572 52081408 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52081723 52081828 52081723 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52082248 52082353 52082248 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52082456 52082566 52082456 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52083022 52083185 52083022 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52083310 52083427 52083310 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52083956 52084180 52083956 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52084395 52084603 52084395 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52084851 52085018 52084851 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52085127 52085232 52085127 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52085329 52085466 52085329 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52085590 52085748 52085590 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52085846 52086049 52085846 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52086124 52086318 52086124 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52086447 52086518 52086447 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 CDS 52086655 52086813 52086655 ID=Msa0817200-mRNA-1:cds;Parent=Msa0817200-mRNA-1
chr5_3 three_prime_UTR 52086814 52087185 52086814 ID=Msa0817200-mRNA-1:three_prime_utr;Parent=Msa0817200-mRNA-1
Gene Sequence

>Msa0817200

ATGTTTACAGAAGGATTGGATGAAACTGCACTCCAATGGATCAACAAGGGATCACAACAACAAGTACAAGTTGAAGAATGCACCACACGCTCTCCTCTAACTGAGAAAAAATCACCTCTTCCTAGATCACCACTTTTCGCCACAACCCTTTCCAATAATAACCTTACTCCTAAATCTCCATCTTTACCTCCTTTAAAATTCAATTCTTCTTTGCTTCCTCGTAGTAACCTCGCTTTCGGATTCAACGATCACGATAGTGTCACTGATGATGATGATGATGAGAGTGTTGATTCATTGTCCTGTCCTGCTGCAGCTGAGACCGATGATGAAAGAGTATTTGACAATTTAGATACTCCAATTGCACAATGCTATGATGAGGAACAGTTATTTGGATTTGGTAATGGAGTTAAACCTAAACCCCTAAAACCTAGTGGAATTTTGAGGAAGGGTTTGGTAAATGAAAATTTAACAATTCAAGTTCCTAACACTGTTAATTCTAGAAGATTTACTGATGGAGAGTTAGGTTTTAACAAATGTGTTCAGAAGAAAATGACTCCATGTGGAAGTGAAATTGGTACTGCTGGAAGAGGGGTTCGGTTTCAAAATACAACTAATTTGAATGATTCTGTTGATTTGGCTACACCAAGTGCTCCTCCTATATTTGTTGATGGTGAAGGTGATGTCGGTTATTCGGAAGGATCCGTGGCGAATCAAGTCGATGAAATGACTCAGCAGCAGGATAGGAGGTCTTGGCAATCTAGAGATTCTGTGAATTGTGATGATGGAGGAGGAATAAGTGAATGTTCAATTGAACAAATGCCTAATACTGTTGCTGAAAGTCAAGAAACAACCTCTACACAGGGCATAGAAAGACAGGCTCCTCCTCCACACTTGCAATATCTCAATAACAGCAGTTGCAATAGTCAAGATGCCTGGCAAACCCTTATCACTTACGACGCCTGCATTCGTCTATGCCTGCAAGCATGGGCAAGAGGCTGTACTGAGGCCCCGGAGTTTCTAAAAGATGAGTGTCTGGCTCTTCGAAGTGCCTTTGGGTTACATGAGTTCTTGTTGCAACCTCGAGGTATAAAGCCAACTGAAGGTAGTACAAGGAATTCAGAACAAACAGTGCCTCTCAAGACAAAGAAGGTTGTGGGGAAAATAAGAGTGGAAGTGAAGAAACTTCGTATTATACAAAGAAGAAAACTGAAGGGCACATTTTCAAACCGAGGATCAATGTATAAGCAAGTTGGGATGGAGTACGTCAGGCATGTTTCATCCCTTGTGAAAAGTGGTATACAGTCTATGAAGGCAGCATCACTCTCAGTGACAGAAGAAGAGCCAATGCATTGTTTGATCCAACTCAAGAGTGCAACAGAAGAAAATGAATCAGAGTCATGTTCGGCAATTTTTCTTCGCCCTGGAAGTGGAGATTATCATGATTTTTTCCCATTGAGCCAAGGGGATGCTTTATTGGTAGAAGTCCAAGATTCTAAGAAGGCAGTCCATGGTGAAGCCAGGATTCCAATTTCTTACCTTAATGATAATCCTAGTGACAGAATTCGGTGGTGGGAAATAAATCATGATGATAATGAATGTGTTGGCAAGATCCAGCTCTCAATTGGAAGTACAATGACAAGTGGTGACAACAATCATATAAAGAGTGCTCCTGTTGTGGAAACTCAAGCCTATGATATATTGTTGGAGGGTGCGATGCGTGCACAGCGTTTCCACTCCCGAAACTTGCGGCTAAATGGGCCATGGAAATGGTTGTTAGATGCATTTGCTGACTACTATGGAGTTTCCGATTCATATGCTAAATTGAGATATCTATTACAGGTCATGAATGTAGCAACTCCAACCAAGGACTGCCTGGAGCTTGTGAAAGAGTTACTTGATCCCCTAATGAAGGCCAGAAGTGAGAGAAGTCTGACTAGGCAAGAGAGAAGTATACTTTTGGATTGTGAAACACAAATTGAAAGACTACTAGCGACTGTTTTTGAGAATTACAAATCGCTTGATGAAAACTCGCCAACAGGTTTAACCGATCATTTTGGTCTAGCATCTCATTCAGCCGCGCCAGCTTTACATCCTGCTCTACAAGTCTACAGTAGTCTTCATGATATACTTTCTTCAGATGCTCAAACTATTCTACAGAACTATCTGCAGACTGCAGCAAGAAAAAGGTGTAGAAAACACATGATGGAGACTGATGAATTTGTGTCGGGTGCCTCAGAAAGTTACCAAATGGACAGCATTACCATCTCAACGGCATACCTGAAGATAAAAAACCTTTGTATTTCTATAAGAAATGAAATTCAGGCAGACATAAAGATCAACAACCATAATACAATCCATGGTCAGCATATTTTTCCCAGTTCAATTGACTTGGCAAACATCACAGCAGCCATTTATAGCACAGAGCTGTGTAAAAGGCTGAGAACTTTCCTTTCTGCATGGCCACCATCAAGTCCACAGCCACATGTGAATGAGCTTCTAGTGGCAACTGCAGACTTTGAACGCGATCTCGAGTCATGGAATATAAGTTCTGTGCAGGGAGGTGTAGACTCCAGAAATTTGTTTCACAATTACATCATGGTTTGGATACAAGATATGCAACTTATTTTGTTTGATCTTTGTAAAGCAGAAAAGGTTCCATGGGCTGGAGTAACCACAAATCATTCCACTTCACCATTTGCTGAGAAAATGTATGAGAACATTAAAGACAACTTAATCCAGTATGAAGTGGTAATCAATAGATGGCCTCAATACTCCTTGTATTTGGAAAATGCTGTGGCAAATATTGAAAGGGCAATTGTGAAATCGCTTGAAAAACAATACAGTGAGATCTTAACTCCTTTGAAAGATAGCATACCAAAGAGACTTCACTTGCAAGTTCAAAAGCTAGCAAGAAGACAATCAGCTACAGTTCAGTTGCTTCCTAACCAATTGGGTATATTCTTGAACACCATCAAGAGGATACTTGATGTCCTACATTGTAGAGTGGAAGACATCCTAAATTCATGGGCATCCTGTCTACCTGTCATGGGAGATAAGAAGTTGTTTGGAGAGCAAATGAATGGAATCACCGTGTTACTGAGAACCAGATACAAAACTTATTTGCAAGCAATAATAGGGAATCTTGTCAACAATATTCAAGGTAATAAGAGCACACGGCTGAAAAAGATGCTTGAGGAAACGAGAGAAGCAGATGGAGAAGCAGAAGTTCGTGAAAGGATGCAGTTGTTGAATTCACAACTCGCTGACTTCATCTCCAACCTTCATGAGGTCTTTACCAGCCAAATCTTCATAGCAATATGTCGTGGATTGTGGGACAGAATGGGACAGATTGTTTTGAAATTTCTAGAAGGGAGGAAAGAAAATAGAATATGGTACAATGGATCTTGCTACGCTCTTGGGATATTGGATGACACATTTGCTTCTCAGATGCAAAGATTAAGAGGAAATGCATTGCAAGAGAAAGATATTGAGCCTCCTCGCTCAGTGATTGAAGCTCGATCTATTCTTTGCAAAGACACAACAAATGCAGCTGATCCATCTACTTATTTCTACATATAG
Protein sequence

>Msa0817200

MFTEGLDETALQWINKGSQQQVQVEECTTRSPLTEKKSPLPRSPLFATTLSNNNLTPKSPSLPPLKFNSSLLPRSNLAFGFNDHDSVTDDDDDESVDSLSCPAAAETDDERVFDNLDTPIAQCYDEEQLFGFGNGVKPKPLKPSGILRKGLVNENLTIQVPNTVNSRRFTDGELGFNKCVQKKMTPCGSEIGTAGRGVRFQNTTNLNDSVDLATPSAPPIFVDGEGDVGYSEGSVANQVDEMTQQQDRRSWQSRDSVNCDDGGGISECSIEQMPNTVAESQETTSTQGIERQAPPPHLQYLNNSSCNSQDAWQTLITYDACIRLCLQAWARGCTEAPEFLKDECLALRSAFGLHEFLLQPRGIKPTEGSTRNSEQTVPLKTKKVVGKIRVEVKKLRIIQRRKLKGTFSNRGSMYKQVGMEYVRHVSSLVKSGIQSMKAASLSVTEEEPMHCLIQLKSATEENESESCSAIFLRPGSGDYHDFFPLSQGDALLVEVQDSKKAVHGEARIPISYLNDNPSDRIRWWEINHDDNECVGKIQLSIGSTMTSGDNNHIKSAPVVETQAYDILLEGAMRAQRFHSRNLRLNGPWKWLLDAFADYYGVSDSYAKLRYLLQVMNVATPTKDCLELVKELLDPLMKARSERSLTRQERSILLDCETQIERLLATVFENYKSLDENSPTGLTDHFGLASHSAAPALHPALQVYSSLHDILSSDAQTILQNYLQTAARKRCRKHMMETDEFVSGASESYQMDSITISTAYLKIKNLCISIRNEIQADIKINNHNTIHGQHIFPSSIDLANITAAIYSTELCKRLRTFLSAWPPSSPQPHVNELLVATADFERDLESWNISSVQGGVDSRNLFHNYIMVWIQDMQLILFDLCKAEKVPWAGVTTNHSTSPFAEKMYENIKDNLIQYEVVINRWPQYSLYLENAVANIERAIVKSLEKQYSEILTPLKDSIPKRLHLQVQKLARRQSATVQLLPNQLGIFLNTIKRILDVLHCRVEDILNSWASCLPVMGDKKLFGEQMNGITVLLRTRYKTYLQAIIGNLVNNIQGNKSTRLKKMLEETREADGEAEVRERMQLLNSQLADFISNLHEVFTSQIFIAICRGLWDRMGQIVLKFLEGRKENRIWYNGSCYALGILDDTFASQMQRLRGNALQEKDIEPPRSVIEARSILCKDTTNAADPSTYFYI*