Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745150 | XP_024641015.1 | 95.017 | 1204 | 45 | 5 | 1 | 1194 | 1 | 1199 | 0.0 | 2353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745150 | G7K0P9 | 95.017 | 1204 | 44 | 6 | 1 | 1194 | 1 | 1198 | 0.0 | 2347 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0745150 | Msa0776650 | 0.990991 | 2.439403e-185 | -8.615850e-47 |
| Msa0745150 | Msa0817200 | 0.969563 | 2.632432e-130 | -8.615850e-47 |
| Msa0745150 | Msa0865440 | 0.976698 | 2.514018e-142 | -8.615850e-47 |
| Msa0745150 | Msa0989370 | 0.800720 | 1.262557e-48 | -8.615850e-47 |
| Msa0159590 | Msa0745150 | 0.802972 | 4.352652e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745150 | MtrunA17_Chr5g0448351 | 94.523 | 1205 | 49 | 7 | 1 | 1194 | 1 | 1199 | 0.0 | 2327 |
| Msa0745150 | MtrunA17_Chr5g0427251 | 41.076 | 1283 | 612 | 28 | 1 | 1192 | 1 | 1230 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745150 | AT5G48310.2 | 56.024 | 1162 | 445 | 17 | 56 | 1194 | 11 | 1129 | 0.0 | 1243 |
| Msa0745150 | AT5G48310.1 | 55.688 | 1178 | 451 | 17 | 56 | 1194 | 11 | 1156 | 0.0 | 1238 |
| Msa0745150 | AT4G24610.1 | 45.047 | 959 | 462 | 13 | 285 | 1192 | 206 | 1150 | 0.0 | 840 |
| Msa0745150 | AT4G24610.3 | 45.047 | 959 | 462 | 13 | 285 | 1192 | 210 | 1154 | 0.0 | 840 |
| Msa0745150 | AT4G24610.4 | 45.000 | 960 | 462 | 14 | 285 | 1192 | 206 | 1151 | 0.0 | 835 |
| Msa0745150 | AT4G24610.2 | 45.000 | 960 | 462 | 14 | 285 | 1192 | 210 | 1155 | 0.0 | 835 |
| Msa0745150 | AT5G65440.6 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 175 | 1083 | 0.0 | 707 |
| Msa0745150 | AT5G65440.1 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 134 | 1042 | 0.0 | 707 |
| Msa0745150 | AT5G65440.4 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 175 | 1083 | 0.0 | 707 |
| Msa0745150 | AT5G65440.8 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 134 | 1042 | 0.0 | 707 |
| Msa0745150 | AT5G65440.9 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 134 | 1042 | 0.0 | 707 |
| Msa0745150 | AT5G65440.7 | 39.098 | 931 | 491 | 15 | 308 | 1184 | 175 | 1083 | 0.0 | 707 |
| Msa0745150 | AT5G65440.3 | 37.720 | 965 | 491 | 16 | 308 | 1184 | 175 | 1117 | 0.0 | 689 |
| Msa0745150 | AT5G65440.2 | 38.106 | 866 | 460 | 15 | 308 | 1119 | 134 | 977 | 0.0 | 634 |
| Msa0745150 | AT5G65440.5 | 38.106 | 866 | 460 | 15 | 308 | 1119 | 175 | 1018 | 0.0 | 634 |
Find 273 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTTAGCCGCAAGTTTC+GGG | 0.157218 | 5_1:+66258131 | None:intergenic |
| TCCCGAAACTTGCGGCTAAA+TGG | 0.173469 | 5_1:-66258132 | Msa0745150:CDS |
| GCCTCAATACTCCTTGTATT+TGG | 0.182439 | 5_1:-66255787 | Msa0745150:CDS |
| TCGCTTGTAAAGGGAAAATT+AGG | 0.183051 | 5_1:-66254277 | Msa0745150:three_prime_UTR |
| TATGATGAGGAACAGTTATT+TGG | 0.188229 | 5_1:-66261580 | Msa0745150:CDS |
| ACTTATTTGCAAGCAATAAT+AGG | 0.201654 | 5_1:-66255215 | Msa0745150:CDS |
| CTCACTTCTGGCCTTCATTA+GGG | 0.203293 | 5_1:+66257842 | None:intergenic |
| TTTAGGAGTGAGATTATTAT+TGG | 0.208620 | 5_1:+66261804 | None:intergenic |
| CTTCTAGAATTAACAGTATT+AGG | 0.238150 | 5_1:+66261469 | None:intergenic |
| TCTCACTTCTGGCCTTCATT+AGG | 0.239461 | 5_1:+66257841 | None:intergenic |
| GTAATTGTGAAACAAATTTC+TGG | 0.249080 | 5_1:+66256076 | None:intergenic |
| GGAGGTAAAGATGGAGATTT+AGG | 0.251463 | 5_1:+66261787 | None:intergenic |
| ACACAGCTCTGTGCTATAAA+TGG | 0.254036 | 5_1:+66256346 | None:intergenic |
| GAGCCAAGGGGATGCTTTAT+TGG | 0.259764 | 5_1:-66258969 | Msa0745150:CDS |
| GCCCATTTAGCCGCAAGTTT+CGG | 0.273486 | 5_1:+66258130 | None:intergenic |
| TTATCATTAAGGTAAGAAAT+TGG | 0.284007 | 5_1:+66258899 | None:intergenic |
| CTCACAGAGAAGTATACTTT+TGG | 0.286313 | 5_1:-66257277 | Msa0745150:intron |
| GAGGAACAGTTATTTGGATT+TGG | 0.296334 | 5_1:-66261574 | Msa0745150:CDS |
| TGATAGGGTACCACTCTTAT+TGG | 0.298776 | 5_1:+66254138 | None:intergenic |
| TTTGAATGATTCTGTTGATT+TGG | 0.300090 | 5_1:-66261335 | Msa0745150:CDS |
| AGCCTCTTGCCCATGCTTGC+AGG | 0.302906 | 5_1:+66260314 | None:intergenic |
| ACAGGTTTAACCGATCATTT+TGG | 0.303277 | 5_1:-66257180 | Msa0745150:CDS |
| CACATACAGGATTATCATTA+AGG | 0.303700 | 5_1:+66258888 | None:intergenic |
| CTGGCTCTTCGAAGTGCCTT+TGG | 0.307080 | 5_1:-66260256 | Msa0745150:CDS |
| GACAGACTGCAGCAAGAAAA+AGG | 0.309951 | 5_1:-66256836 | Msa0745150:intron |
| ATGGATCTTGCTACGCTCTT+GGG | 0.310033 | 5_1:-66254716 | Msa0745150:CDS |
| CATTCCTTTACAAAAGTGAT+AGG | 0.315414 | 5_1:+66254122 | None:intergenic |
| ACTTGCAAGTGAAGTCTCTT+TGG | 0.319778 | 5_1:+66255552 | None:intergenic |
| GCTGACCATGGATTGTATTA+TGG | 0.323976 | 5_1:+66256658 | None:intergenic |
| GACATATTGCTATGAAGATT+TGG | 0.329067 | 5_1:+66254942 | None:intergenic |
| AGATTTACTGATGGAGAGTT+AGG | 0.331074 | 5_1:-66261448 | Msa0745150:CDS |
| TTCTATAAGAAATGAAATTC+AGG | 0.331997 | 5_1:-66256700 | Msa0745150:CDS |
| ACTCCATGTGGAAGTGAAAT+TGG | 0.340049 | 5_1:-66261397 | Msa0745150:CDS |
| ATAGCACAGAGCTGTGTAAA+AGG | 0.344097 | 5_1:-66256340 | Msa0745150:CDS |
| CACAAGCTCCAGGCAGTCCT+TGG | 0.345260 | 5_1:+66257881 | None:intergenic |
| GACAGGATGCCCATGAATTT+AGG | 0.345736 | 5_1:+66255315 | None:intergenic |
| CTTATTTGCAAGCAATAATA+GGG | 0.349385 | 5_1:-66255214 | Msa0745150:CDS |
| TCATCATAACATTGTGCAAT+TGG | 0.352430 | 5_1:+66261595 | None:intergenic |
| TCATGATAATCTCCACTTCC+AGG | 0.356135 | 5_1:+66259423 | None:intergenic |
| TTCTTGTAGATATCTATTAC+AGG | 0.357704 | 5_1:-66257925 | Msa0745150:intron |
| AATTTCCTTCACGAAGAGTA+TGG | 0.362980 | 5_1:-66254186 | Msa0745150:three_prime_UTR |
| GCTCCTCCTATATTTGTTGA+TGG | 0.363206 | 5_1:-66261301 | Msa0745150:CDS |
| AGTCAGACTTCTCTCACTTC+TGG | 0.363501 | 5_1:+66257830 | None:intergenic |
| CACTCTTATTGGTAAGAGAT+TGG | 0.363953 | 5_1:+66254149 | None:intergenic |
| ATCTCGAGTCATGGAATATA+AGG | 0.364375 | 5_1:-66256229 | Msa0745150:intron |
| GGACTGCCTTCTTAGAATCT+TGG | 0.368271 | 5_1:+66258939 | None:intergenic |
| TACCTTTCAGCAACAGTATT+AGG | 0.369090 | 5_1:+66261130 | None:intergenic |
| CAGAGATAACTTACTTGGTT+AGG | 0.370777 | 5_1:+66255486 | None:intergenic |
| TTCACAATTACATCATGGTT+TGG | 0.372780 | 5_1:-66256064 | Msa0745150:CDS |
| CTTCTGTTGCACTCTTGAGT+TGG | 0.373272 | 5_1:+66259484 | None:intergenic |
| ATGGGAGATAAGAAGTTGTT+TGG | 0.376540 | 5_1:-66255284 | Msa0745150:CDS |
| CAGTTATTTGGATTTGGTAA+TGG | 0.380161 | 5_1:-66261568 | Msa0745150:CDS |
| TATTGATTACCACTTCATAC+TGG | 0.382046 | 5_1:+66255814 | None:intergenic |
| AATGGATCTTGCTACGCTCT+TGG | 0.383403 | 5_1:-66254717 | Msa0745150:CDS |
| GATGCATTTGCTGACTACTA+TGG | 0.386031 | 5_1:-66258090 | Msa0745150:CDS |
| GGAGGAAAGAAAATAGAATA+TGG | 0.387361 | 5_1:-66254743 | Msa0745150:CDS |
| TTCATGTTTCAGTTCTGTGC+AGG | 0.393565 | 5_1:-66256111 | Msa0745150:intron |
| TGGCTCTTCGAAGTGCCTTT+GGG | 0.394270 | 5_1:-66260255 | Msa0745150:intron |
| TAATAGAATCTCTTTCTTGT+TGG | 0.405017 | 5_1:+66254225 | None:intergenic |
| ACTTGCAATATCTCAATAAC+AGG | 0.409440 | 5_1:-66260796 | Msa0745150:intron |
| CCTCGTAGTAACCTCGCTTT+CGG | 0.410441 | 5_1:-66261739 | Msa0745150:CDS |
| AAAGCATCCCCTTGGCTCAA+TGG | 0.411838 | 5_1:+66258974 | None:intergenic |
| CCACAAATTGTTCAGATTCA+AGG | 0.412166 | 5_1:-66255103 | Msa0745150:intron |
| CCCGAAACTTGCGGCTAAAT+GGG | 0.412285 | 5_1:-66258131 | Msa0745150:CDS |
| CCTTCACCATCAACAAATAT+AGG | 0.414292 | 5_1:+66261295 | None:intergenic |
| AAGCATCCCCTTGGCTCAAT+GGG | 0.416333 | 5_1:+66258975 | None:intergenic |
| TTCGTCTATGCCTGCAAGCA+TGG | 0.422145 | 5_1:-66260324 | Msa0745150:CDS |
| TGAAGGTGATGTCGGTTATT+CGG | 0.424528 | 5_1:-66261278 | Msa0745150:CDS |
| CTTGATGAAAACTCGCCAAC+AGG | 0.425161 | 5_1:-66257198 | Msa0745150:CDS |
| AGTGAGATTATTATTGGAAA+GGG | 0.429277 | 5_1:+66261810 | None:intergenic |
| TCTCAGATGCAAAGATTAAG+AGG | 0.429798 | 5_1:-66254536 | Msa0745150:CDS |
| TGGTGACAACAATCATATAA+AGG | 0.432851 | 5_1:-66258681 | Msa0745150:intron |
| GGCAAGATCCAGCTCTCAAT+TGG | 0.438777 | 5_1:-66258719 | Msa0745150:CDS |
| TGATCTTTGTAAAGCAGAAA+AGG | 0.441629 | 5_1:-66256015 | Msa0745150:intron |
| GACATCAAGTATCCTCTTGA+TGG | 0.441717 | 5_1:+66255361 | None:intergenic |
| ATATGCAGAGTGACAGAATT+CGG | 0.441939 | 5_1:-66258778 | Msa0745150:intron |
| TGCAGGCGTCGTAAGTGATA+AGG | 0.442938 | 5_1:+66260347 | None:intergenic |
| TGGTTACCTTGTTGATCCAT+TGG | 0.445990 | 5_1:+66262092 | None:intergenic |
| AAGGTAAGAAATTGGAATCC+TGG | 0.447464 | 5_1:+66258907 | None:intergenic |
| ACATGTGGCTGTGGACTTGA+TGG | 0.447824 | 5_1:+66256290 | None:intergenic |
| GGCATCCTGTCTACCTGTCA+TGG | 0.449910 | 5_1:-66255303 | Msa0745150:CDS |
| GATCAATGTATAAGCAAGTT+GGG | 0.451761 | 5_1:-66259761 | Msa0745150:CDS |
| AAAGTGTTCTCGCTTGTAAA+GGG | 0.452871 | 5_1:-66254286 | Msa0745150:three_prime_UTR |
| GGCTAAATGGGCCATGGAAA+TGG | 0.453209 | 5_1:-66258119 | Msa0745150:CDS |
| AACAAATGACACAGGTTCCA+TGG | 0.454278 | 5_1:-66255911 | Msa0745150:intron |
| TAGGCTTGAGTTTCCACAAC+AGG | 0.455044 | 5_1:+66258198 | None:intergenic |
| ATGAAGTGGTAATCAATAGA+TGG | 0.456403 | 5_1:-66255809 | Msa0745150:CDS |
| CGGAGAAGTAGAAGAATCAA+TGG | 0.458672 | 5_1:+66262166 | None:intergenic |
| TTTCTTGTTGGCAAATGCCA+TGG | 0.462228 | 5_1:+66254237 | None:intergenic |
| TATATGTAGAAATAAGTAGA+TGG | 0.465515 | 5_1:+66254422 | None:intergenic |
| GGGAAAATTAGGGCCGCAAA+AGG | 0.466296 | 5_1:-66254266 | Msa0745150:three_prime_UTR |
| ATCTCCCATGACAGGTAGAC+AGG | 0.466496 | 5_1:+66255298 | None:intergenic |
| AGCAGCAGGATAGGAGGTCT+TGG | 0.466639 | 5_1:-66261219 | Msa0745150:CDS |
| AACTCCAACCAAGGACTGCC+TGG | 0.468493 | 5_1:-66257889 | Msa0745150:CDS |
| GTACTGCTGGAAGAGGGGTT+CGG | 0.469467 | 5_1:-66261375 | Msa0745150:CDS |
| GCAGGCGTCGTAAGTGATAA+GGG | 0.470911 | 5_1:+66260348 | None:intergenic |
| TTCCTTGTACTACCTTCAGT+TGG | 0.472513 | 5_1:+66260111 | None:intergenic |
| TTGTTTGGAGAGCAAATGAA+TGG | 0.472679 | 5_1:-66255269 | Msa0745150:CDS |
| TAGCAATATGTCGTGGATTG+TGG | 0.475941 | 5_1:-66254931 | Msa0745150:CDS |
| AGCAATATGTCGTGGATTGT+GGG | 0.476986 | 5_1:-66254930 | Msa0745150:CDS |
| CTCAAGACAAAGAAGGTTGT+GGG | 0.479223 | 5_1:-66260069 | Msa0745150:CDS |
| GTCCATTTGGTAACTTTCTG+AGG | 0.479994 | 5_1:+66256770 | None:intergenic |
| AAAAGTGTTCTCGCTTGTAA+AGG | 0.484004 | 5_1:-66254287 | Msa0745150:three_prime_UTR |
| AAGTTGGGATGGAGTACGTC+AGG | 0.485061 | 5_1:-66259746 | Msa0745150:CDS |
| TTCTTGTTGGCAAATGCCAT+GGG | 0.485344 | 5_1:+66254238 | None:intergenic |
| GTTTCATCCCTTGTGAAAAG+TGG | 0.486018 | 5_1:-66259720 | Msa0745150:CDS |
| TCCAAATACAAGGAGTATTG+AGG | 0.487212 | 5_1:+66255786 | None:intergenic |
| CCGATTCATATGCTAAATTG+AGG | 0.487243 | 5_1:-66258062 | Msa0745150:intron |
| ACCCTCCAACAATATATCAT+AGG | 0.489559 | 5_1:+66258179 | None:intergenic |
| AGATGGTAATGCTGTCCATT+TGG | 0.491575 | 5_1:+66256757 | None:intergenic |
| GTTTCTAAAAGATGAGTGTC+TGG | 0.492440 | 5_1:-66260275 | Msa0745150:CDS |
| AGCTCATTCACATGTGGCTG+TGG | 0.493960 | 5_1:+66256281 | None:intergenic |
| TGGAAGACATCCTAAATTCA+TGG | 0.495445 | 5_1:-66255325 | Msa0745150:CDS |
| TCATGTTTCAGTTCTGTGCA+GGG | 0.496350 | 5_1:-66256110 | Msa0745150:intron |
| CGAAAACGAAGATGATGAAA+GGG | 0.496944 | 5_1:-66261638 | Msa0745150:CDS |
| AAATGACTCAGCAGCAGGAT+AGG | 0.498541 | 5_1:-66261228 | Msa0745150:CDS |
| CCTCAATTTAGCATATGAAT+CGG | 0.500851 | 5_1:+66258062 | None:intergenic |
| AAGAGGCTGTACTGAGGCCC+CGG | 0.501987 | 5_1:-66260299 | Msa0745150:CDS |
| GGAAGTGAAATTGGTACTGC+TGG | 0.503174 | 5_1:-66261388 | Msa0745150:CDS |
| AGGCAGTCCATGGTGAAGCC+AGG | 0.503776 | 5_1:-66258925 | Msa0745150:CDS |
| GTTGCGAAAAGAGGTGATCT+AGG | 0.504571 | 5_1:+66261835 | None:intergenic |
| ACAACCTTCTTTGTCTTGAG+AGG | 0.505297 | 5_1:+66260072 | None:intergenic |
| TGCCTCAGAAAGTTACCAAA+TGG | 0.505968 | 5_1:-66256772 | Msa0745150:CDS |
| TTTGGTATGCTATCTTTCAA+AGG | 0.506151 | 5_1:+66255570 | None:intergenic |
| TTTGTTTCACAATTACATCA+TGG | 0.508017 | 5_1:-66256069 | Msa0745150:CDS |
| ATGACACAGGTTCCATGGGC+TGG | 0.508635 | 5_1:-66255906 | Msa0745150:intron |
| TCGTCTATGCCTGCAAGCAT+GGG | 0.511245 | 5_1:-66260323 | Msa0745150:CDS |
| TCAAGCCTATGATATATTGT+TGG | 0.513388 | 5_1:-66258184 | Msa0745150:CDS |
| TGGTGAAGTGGAATGATTTG+TGG | 0.516170 | 5_1:+66255878 | None:intergenic |
| TATTGCTATGAAGATTTGGC+TGG | 0.516781 | 5_1:+66254946 | None:intergenic |
| TCTCAAGACAAAGAAGGTTG+TGG | 0.517514 | 5_1:-66260070 | Msa0745150:CDS |
| GAAATTGGTACTGCTGGAAG+AGG | 0.520455 | 5_1:-66261382 | Msa0745150:CDS |
| CCCTTCCTCAAAATTCCACT+AGG | 0.520908 | 5_1:+66261523 | None:intergenic |
| TCACTCTCAGTGACAGAAGA+AGG | 0.521728 | 5_1:-66259675 | Msa0745150:intron |
| GAGTGAGATTATTATTGGAA+AGG | 0.521775 | 5_1:+66261809 | None:intergenic |
| CGCTTGTAAAGGGAAAATTA+GGG | 0.522265 | 5_1:-66254276 | Msa0745150:three_prime_UTR |
| AAATGAATCAGAGTCATGTT+CGG | 0.522569 | 5_1:-66259460 | Msa0745150:CDS |
| TCATCGGTCTCAGCAGCAGC+AGG | 0.523051 | 5_1:+66261661 | None:intergenic |
| TCACTTCTGGCCTTCATTAG+GGG | 0.524637 | 5_1:+66257843 | None:intergenic |
| GAAAGGGTTGTTGCGAAAAG+AGG | 0.525261 | 5_1:+66261826 | None:intergenic |
| TTGTACTTCCAATTGAGAGC+TGG | 0.525299 | 5_1:+66258711 | None:intergenic |
| AGATATTGCAAGTGTGGAGG+AGG | 0.526974 | 5_1:+66260806 | None:intergenic |
| GGATCAATGTATAAGCAAGT+TGG | 0.527369 | 5_1:-66259762 | Msa0745150:CDS |
| TCGTGGATTGTGGGACAGAA+TGG | 0.528693 | 5_1:-66254921 | Msa0745150:CDS |
| AGCCTATGATATATTGTTGG+AGG | 0.530615 | 5_1:-66258181 | Msa0745150:CDS |
| TTCAGTTTCCCATTGAGCCA+AGG | 0.531016 | 5_1:-66258983 | Msa0745150:intron |
| CTACTGTAGACTTGTAGAGC+AGG | 0.532410 | 5_1:+66257123 | None:intergenic |
| AGCTCCAGGCAGTCCTTGGT+TGG | 0.532583 | 5_1:+66257885 | None:intergenic |
| AACAACCATAATACAATCCA+TGG | 0.534702 | 5_1:-66256663 | Msa0745150:CDS |
| TTAGCCGCAAGTTTCGGGAG+TGG | 0.537146 | 5_1:+66258136 | None:intergenic |
| GTAAGTGATAAGGGTTTGCC+AGG | 0.537868 | 5_1:+66260357 | None:intergenic |
| CTTGCTTATACATTGATCCT+CGG | 0.538232 | 5_1:+66259766 | None:intergenic |
| TCTTTCTATGCCCTGTGTAG+AGG | 0.538250 | 5_1:+66260835 | None:intergenic |
| TACACAGGGCATAGAAAGAC+AGG | 0.540262 | 5_1:-66260831 | Msa0745150:CDS |
| ACGAAAACGAAGATGATGAA+AGG | 0.545896 | 5_1:-66261639 | Msa0745150:CDS |
| AGTTGGATCAAACAATGCAT+TGG | 0.548129 | 5_1:+66259501 | None:intergenic |
| TCAGTTTCCCATTGAGCCAA+GGG | 0.548372 | 5_1:-66258982 | Msa0745150:intron |
| GGTAAAGACCTCATGAAGGT+TGG | 0.548390 | 5_1:+66254967 | None:intergenic |
| TGTAGAGCAGGATGTAAAGC+TGG | 0.549874 | 5_1:+66257135 | None:intergenic |
| AAAAGAGGTGATCTAGGAAG+AGG | 0.550795 | 5_1:+66261841 | None:intergenic |
| TGTCTTCCACTCTACAATGT+AGG | 0.551082 | 5_1:+66255339 | None:intergenic |
| TTGCAGGCATAGACGAATGC+AGG | 0.551829 | 5_1:+66260330 | None:intergenic |
| GGTCTCAGCAGCAGCAGGAC+AGG | 0.552413 | 5_1:+66261666 | None:intergenic |
| TTTCTCAGCAAATGGTGAAG+TGG | 0.552861 | 5_1:+66255866 | None:intergenic |
| AAGTGGTATACAGTCTATGA+AGG | 0.554143 | 5_1:-66259703 | Msa0745150:CDS |
| GAGACTGATGAATTTGTGTC+GGG | 0.554425 | 5_1:-66256795 | Msa0745150:CDS |
| AGAAGTCCAAGATTCTAAGA+AGG | 0.555902 | 5_1:-66258945 | Msa0745150:CDS |
| TTGAGATATTGCAAGTGTGG+AGG | 0.557086 | 5_1:+66260803 | None:intergenic |
| GTTGATGGTGAAGGTGATGT+CGG | 0.557464 | 5_1:-66261286 | Msa0745150:CDS |
| CCTATATTTGTTGATGGTGA+AGG | 0.557712 | 5_1:-66261295 | Msa0745150:CDS |
| ATTCCTTTACAAAAGTGATA+GGG | 0.558365 | 5_1:+66254123 | None:intergenic |
| AAATGATCGGTTAAACCTGT+TGG | 0.559634 | 5_1:+66257183 | None:intergenic |
| GTAACTCTTTCACAAGCTCC+AGG | 0.560180 | 5_1:+66257871 | None:intergenic |
| GGCTGTGGCAAATATTGAAA+GGG | 0.560699 | 5_1:-66255637 | Msa0745150:CDS |
| TGGATCTTGCTACGCTCTTG+GGG | 0.560823 | 5_1:-66254715 | Msa0745150:intron |
| GTTACTTGATCCCCTAATGA+AGG | 0.563068 | 5_1:-66257853 | Msa0745150:CDS |
| CGATGAAATGACTCAGCAGC+AGG | 0.563082 | 5_1:-66261233 | Msa0745150:CDS |
| CTTCAGGTATGCCGTTGAGA+TGG | 0.565249 | 5_1:+66256740 | None:intergenic |
| GAGAAGCAGAAGTTCGTGAA+AGG | 0.567985 | 5_1:-66255027 | Msa0745150:CDS |
| AAATTGGTACTGCTGGAAGA+GGG | 0.568372 | 5_1:-66261381 | Msa0745150:CDS |
| AATGTATAAGCAAGTTGGGA+TGG | 0.569458 | 5_1:-66259757 | Msa0745150:CDS |
| AATTCTAGAAGATTTACTGA+TGG | 0.569546 | 5_1:-66261457 | Msa0745150:CDS |
| TGAGAACTTTCCTTTCTGCA+TGG | 0.569606 | 5_1:-66256316 | Msa0745150:CDS |
| AGGCTGTGGCAAATATTGAA+AGG | 0.569983 | 5_1:-66255638 | Msa0745150:CDS |
| ACAAATGACACAGGTTCCAT+GGG | 0.570078 | 5_1:-66255910 | Msa0745150:intron |
| CTTGCAGTAGTCAAGATGCC+TGG | 0.570788 | 5_1:-66260375 | Msa0745150:CDS |
| AGAGTGACAGAATTCGGTGG+TGG | 0.570925 | 5_1:-66258772 | Msa0745150:CDS |
| AACTTCTTATCTCCCATGAC+AGG | 0.571486 | 5_1:+66255290 | None:intergenic |
| ACTGCAGAGTGCTCCTGTTG+TGG | 0.571685 | 5_1:-66258211 | Msa0745150:intron |
| TGGATGAAACTGCACTCCAA+TGG | 0.572829 | 5_1:-66262108 | Msa0745150:CDS |
| CAACTTAATCCAGTATGAAG+TGG | 0.574199 | 5_1:-66255823 | Msa0745150:CDS |
| GATTCTGTGAATTGTGATGA+TGG | 0.575898 | 5_1:-66261187 | Msa0745150:CDS |
| TCAAGAAACAACCTCTACAC+AGG | 0.577200 | 5_1:-66260846 | Msa0745150:CDS |
| TATTCTACAGAACTATCTGC+AGG | 0.579462 | 5_1:-66257067 | Msa0745150:intron |
| TTGAACGCGATCTCGAGTCA+TGG | 0.579995 | 5_1:-66256238 | Msa0745150:CDS |
| TGCCTGCAAGCATGGGCAAG+AGG | 0.580416 | 5_1:-66260316 | Msa0745150:CDS |
| TATACAAAGAAGAAAACTGA+AGG | 0.581707 | 5_1:-66259802 | Msa0745150:CDS |
| AAGGTGTAGAAAACACATGA+TGG | 0.582937 | 5_1:-66256817 | Msa0745150:CDS |
| ACAAATATAGGAGGAGCACT+TGG | 0.582954 | 5_1:+66261307 | None:intergenic |
| GGAAGACATCCTAAATTCAT+GGG | 0.584196 | 5_1:-66255324 | Msa0745150:CDS |
| CGTGGATTGTGGGACAGAAT+GGG | 0.584754 | 5_1:-66254920 | Msa0745150:CDS |
| CTTTGCCATACTCTTCGTGA+AGG | 0.587668 | 5_1:+66254181 | None:intergenic |
| GCATCCTGTCTACCTGTCAT+GGG | 0.587857 | 5_1:-66255302 | Msa0745150:CDS |
| GAAAATAGAATATGGTACAA+TGG | 0.588488 | 5_1:-66254735 | Msa0745150:CDS |
| CATGATGATAATGAATGTGT+TGG | 0.588840 | 5_1:-66258740 | Msa0745150:CDS |
| TGCCTAATACTGTTGCTGAA+AGG | 0.589120 | 5_1:-66261132 | Msa0745150:intron |
| GAGTGACAGAATTCGGTGGT+GGG | 0.589193 | 5_1:-66258771 | Msa0745150:CDS |
| ATTGTGGGACAGAATGGGAC+AGG | 0.589891 | 5_1:-66254915 | Msa0745150:intron |
| CTCAGTTAGAGGAGAGCGTG+TGG | 0.590106 | 5_1:+66261873 | None:intergenic |
| TTGATGGTGGCCATGCAGAA+AGG | 0.591303 | 5_1:+66256306 | None:intergenic |
| CATGATAATCTCCACTTCCA+GGG | 0.592137 | 5_1:+66259424 | None:intergenic |
| GGTTGTGGGGAAAATAAGAG+TGG | 0.592804 | 5_1:-66260055 | Msa0745150:CDS |
| TGACTCAGCAGCAGGATAGG+AGG | 0.593992 | 5_1:-66261225 | Msa0745150:CDS |
| GCATCTAACAACCATTTCCA+TGG | 0.594327 | 5_1:+66258108 | None:intergenic |
| CTACCAATAAAGCATCCCCT+TGG | 0.594424 | 5_1:+66258966 | None:intergenic |
| GAATGTAGCAACTCCAACCA+AGG | 0.598101 | 5_1:-66257898 | Msa0745150:CDS |
| GCCTATGATATATTGTTGGA+GGG | 0.599388 | 5_1:-66258180 | Msa0745150:CDS |
| GTGGGGAAAATAAGAGTGGA+AGG | 0.600347 | 5_1:-66260051 | Msa0745150:intron |
| GATTCTAAGAAGGCAGTCCA+TGG | 0.600429 | 5_1:-66258935 | Msa0745150:CDS |
| ACTTGCGGCTAAATGGGCCA+TGG | 0.602220 | 5_1:-66258125 | Msa0745150:CDS |
| AGCAGGATGTAAAGCTGGCG+CGG | 0.602954 | 5_1:+66257140 | None:intergenic |
| TTTGTGGTTACTCCAGCCCA+TGG | 0.604020 | 5_1:+66255894 | None:intergenic |
| AGTGCCTCTCAAGACAAAGA+AGG | 0.604507 | 5_1:-66260076 | Msa0745150:CDS |
| AGCCAACTGAAGGTAGTACA+AGG | 0.604967 | 5_1:-66260113 | Msa0745150:CDS |
| TTGGAATCCTGGCTTCACCA+TGG | 0.605696 | 5_1:+66258918 | None:intergenic |
| GCCGCAAAAGGCTATTCCCA+TGG | 0.605764 | 5_1:-66254254 | Msa0745150:three_prime_UTR |
| GGAGACTGATGAATTTGTGT+CGG | 0.611838 | 5_1:-66256796 | Msa0745150:CDS |
| CCTAAAGCCCTAAAACCTAG+TGG | 0.614249 | 5_1:-66261538 | Msa0745150:CDS |
| CATTTCTTATAGAAATACAA+AGG | 0.614859 | 5_1:+66256709 | None:intergenic |
| AGATGCTAGACCAAAATGAT+CGG | 0.615442 | 5_1:+66257170 | None:intergenic |
| GGTGATGTCGGTTATTCGGA+AGG | 0.617182 | 5_1:-66261274 | Msa0745150:CDS |
| ATCTTCATAGCAATATGTCG+TGG | 0.620851 | 5_1:-66254938 | Msa0745150:CDS |
| GTTTCCACTCCCGAAACTTG+CGG | 0.622116 | 5_1:-66258140 | Msa0745150:CDS |
| GGCTGGTAAAGACCTCATGA+AGG | 0.622315 | 5_1:+66254963 | None:intergenic |
| CGGTTATTCGGAAGGATCCG+TGG | 0.624271 | 5_1:-66261266 | Msa0745150:CDS |
| GAGGAAACGAGAGAAGCAGA+TGG | 0.624705 | 5_1:-66255049 | Msa0745150:CDS |
| CTTCATCTCCAACCTTCATG+AGG | 0.625205 | 5_1:-66254975 | Msa0745150:CDS |
| GAAGTGAGAGAAGTCTGACT+AGG | 0.628633 | 5_1:-66257827 | Msa0745150:CDS |
| CGAGGTATAAAGCCAACTGA+AGG | 0.628927 | 5_1:-66260123 | Msa0745150:CDS |
| CAAGAAACAACCTCTACACA+GGG | 0.629450 | 5_1:-66260845 | Msa0745150:CDS |
| TCAGTTGGCTTTATACCTCG+AGG | 0.631132 | 5_1:+66260126 | None:intergenic |
| AATTGCACAATGTTATGATG+AGG | 0.632254 | 5_1:-66261593 | Msa0745150:CDS |
| TGTGGCTGTGGACTTGATGG+TGG | 0.632595 | 5_1:+66256293 | None:intergenic |
| TCACCATCAACAAATATAGG+AGG | 0.635308 | 5_1:+66261298 | None:intergenic |
| GAGAAGTCTGACTAGGCAAG+AGG | 0.636214 | 5_1:-66257820 | Msa0745150:intron |
| GTATCTGGTTCTCAGTAACA+CGG | 0.636684 | 5_1:+66255241 | None:intergenic |
| TTATTGAGATATTGCAAGTG+TGG | 0.638514 | 5_1:+66260800 | None:intergenic |
| ATACAAAGAAGAAAACTGAA+GGG | 0.639387 | 5_1:-66259801 | Msa0745150:CDS |
| CAGTTTCCCATTGAGCCAAG+GGG | 0.639439 | 5_1:-66258981 | Msa0745150:CDS |
| CAATCTCTTACCAATAAGAG+TGG | 0.645216 | 5_1:-66254148 | Msa0745150:three_prime_UTR |
| CGAGCTTCAATCACTGAGCG+AGG | 0.647220 | 5_1:+66254482 | None:intergenic |
| TGATGTCCTACATTGTAGAG+TGG | 0.648648 | 5_1:-66255345 | Msa0745150:CDS |
| TGTTTCAGTTCTGTGCAGGG+AGG | 0.649450 | 5_1:-66256107 | Msa0745150:intron |
| GTGAATTGTGATGATGGAGG+AGG | 0.651967 | 5_1:-66261181 | Msa0745150:CDS |
| GAGTTCTTGTTGCAACCTCG+AGG | 0.652321 | 5_1:-66260141 | Msa0745150:CDS |
| TATTCTTGAACACCATCAAG+AGG | 0.652692 | 5_1:-66255373 | Msa0745150:CDS |
| ATTGGAAGTACAATGACAAG+TGG | 0.653819 | 5_1:-66258701 | Msa0745150:CDS |
| CAGAAGAAAATGACTCCATG+TGG | 0.655141 | 5_1:-66261409 | Msa0745150:CDS |
| TTCATCGACTTGATTCGCCA+CGG | 0.655644 | 5_1:+66261249 | None:intergenic |
| AATTGGTACTGCTGGAAGAG+GGG | 0.656682 | 5_1:-66261380 | Msa0745150:CDS |
| ACATGTGAATGAGCTTCTAG+TGG | 0.657596 | 5_1:-66256273 | Msa0745150:CDS |
| TCAAGACAAAGAAGGTTGTG+GGG | 0.665374 | 5_1:-66260068 | Msa0745150:CDS |
| GGACAGCATTACCATCTCAA+CGG | 0.666424 | 5_1:-66256751 | Msa0745150:CDS |
| GTACCAATTTCACTTCCACA+TGG | 0.670567 | 5_1:+66261394 | None:intergenic |
| ACTAGAAGCTCATTCACATG+TGG | 0.678399 | 5_1:+66256275 | None:intergenic |
| TCTGTGAATTGTGATGATGG+AGG | 0.678617 | 5_1:-66261184 | Msa0745150:CDS |
| GCTTCAATCACTGAGCGAGG+AGG | 0.678724 | 5_1:+66254485 | None:intergenic |
| TTCAAGGTAATAAGAGCACA+CGG | 0.684888 | 5_1:-66255087 | Msa0745150:CDS |
| GATCGTTGAATCCGAAAGCG+AGG | 0.685240 | 5_1:+66261728 | None:intergenic |
| TGCAGAGTGACAGAATTCGG+TGG | 0.714678 | 5_1:-66258775 | Msa0745150:intron |
| ATGGGCAAGAGGCTGTACTG+AGG | 0.720091 | 5_1:-66260305 | Msa0745150:CDS |
| TGCACTCCAATGGATCAACA+AGG | 0.722010 | 5_1:-66262098 | Msa0745150:intron |
| CCGAAAGCGAGGTTACTACG+AGG | 0.776363 | 5_1:+66261739 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAATTTATAACTATA+AGG | + | chr5_1:66256213-66256232 | None:intergenic | 10.0% |
| !! | AAAAATTACTAATGTATTTA+TGG | - | chr5_1:66256324-66256343 | Msa0745150:CDS | 10.0% |
| !!! | AGCTTTTAATTTTTTTAATT+AGG | - | chr5_1:66256650-66256669 | Msa0745150:CDS | 10.0% |
| !!! | GCTTTTAATTTTTTTAATTA+GGG | - | chr5_1:66256651-66256670 | Msa0745150:CDS | 10.0% |
| !!! | AAAAGAATGAATAATTTTAT+TGG | + | chr5_1:66258743-66258762 | None:intergenic | 10.0% |
| !! | AACTGTAATTAAGTAATAAA+AGG | + | chr5_1:66254205-66254224 | None:intergenic | 15.0% |
| !!! | AAAGAAGAATTGAATTTTAA+AGG | + | chr5_1:66254472-66254491 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTAAATTACTAT+CGG | + | chr5_1:66255219-66255238 | None:intergenic | 15.0% |
| !! | TAAGAAAATGAATTTCAAAA+AGG | + | chr5_1:66255339-66255358 | None:intergenic | 15.0% |
| !!! | TTTGAAATTCATTTTCTTAA+CGG | - | chr5_1:66255340-66255359 | Msa0745150:CDS | 15.0% |
| !! | CATAAAAAAAAAAAAAAGAG+AGG | + | chr5_1:66255824-66255843 | None:intergenic | 15.0% |
| !!! | CTCTCTTTTTTTTTTTTTTA+TGG | - | chr5_1:66255822-66255841 | Msa0745150:CDS | 15.0% |
| !! | AGATGATTATTACATAAATT+TGG | + | chr5_1:66257429-66257448 | None:intergenic | 15.0% |
| !! | AAATTTATGTAATAATCATC+TGG | - | chr5_1:66257428-66257447 | Msa0745150:intron | 15.0% |
| !! | AATATTTGTATTCATTAGTT+AGG | - | chr5_1:66258550-66258569 | Msa0745150:intron | 15.0% |
| !! | TTATATCTGATAAAAACAAA+TGG | - | chr5_1:66258614-66258633 | Msa0745150:intron | 15.0% |
| !! | TAATATGTATTAAGCAAAAA+GGG | + | chr5_1:66259801-66259820 | None:intergenic | 15.0% |
| !! | TTAATATGTATTAAGCAAAA+AGG | + | chr5_1:66259802-66259821 | None:intergenic | 15.0% |
| !!! | ATTTTGTTCTGTAAAAAATT+TGG | + | chr5_1:66261880-66261899 | None:intergenic | 15.0% |
| !!! | TTTTTTCCTTTTTTTGAGTT+CGG | + | chr5_1:66254092-66254111 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAAGAAGAAAGA+AGG | + | chr5_1:66254179-66254198 | None:intergenic | 20.0% |
| !!! | TTTAAAGTCACATAAATGAT+TGG | + | chr5_1:66255645-66255664 | None:intergenic | 20.0% |
| !!! | TCTTATTTCTCTAATTTCAT+AGG | - | chr5_1:66256065-66256084 | Msa0745150:CDS | 20.0% |
| !!! | TTGAATATTTCTGTACAAAT+TGG | - | chr5_1:66256243-66256262 | Msa0745150:CDS | 20.0% |
| !! | TTATCATTAAGGTAAGAAAT+TGG | + | chr5_1:66257339-66257358 | None:intergenic | 20.0% |
| !! | GATTATTACATAAATTTGGA+TGG | + | chr5_1:66257425-66257444 | None:intergenic | 20.0% |
| !! | TACATTAGTTCAATAAATCT+TGG | - | chr5_1:66257596-66257615 | Msa0745150:intron | 20.0% |
| !! | AAGAGAAAAAAAAAGTTACA+CGG | - | chr5_1:66257685-66257704 | Msa0745150:intron | 20.0% |
| !! | AAAATTGTTCATTAAGAACT+AGG | - | chr5_1:66257738-66257757 | Msa0745150:intron | 20.0% |
| !!! | TTATTATTTTTGCCTTGTTA+GGG | + | chr5_1:66258221-66258240 | None:intergenic | 20.0% |
| !! | TATTCATTAGTTAGGATATA+AGG | - | chr5_1:66258558-66258577 | Msa0745150:intron | 20.0% |
| !!! | GTTTTTTTTAATTGTGTCAT+GGG | + | chr5_1:66258810-66258829 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTAATTGTGTCA+TGG | + | chr5_1:66258811-66258830 | None:intergenic | 20.0% |
| !! | TTACTGTTTGTATTATTTGT+TGG | - | chr5_1:66258871-66258890 | Msa0745150:intron | 20.0% |
| !!! | GTTTTGGTTTCTAAATAAAA+TGG | - | chr5_1:66259368-66259387 | Msa0745150:intron | 20.0% |
| !! | CATTTCTTATAGAAATACAA+AGG | + | chr5_1:66259529-66259548 | None:intergenic | 20.0% |
| !! | TTCTATAAGAAATGAAATTC+AGG | - | chr5_1:66259535-66259554 | Msa0745150:intron | 20.0% |
| !!! | AAATTTAGTTTTTCAACACT+AGG | - | chr5_1:66259679-66259698 | Msa0745150:CDS | 20.0% |
| !!! | AATTTAGTTTTTCAACACTA+GGG | - | chr5_1:66259680-66259699 | Msa0745150:CDS | 20.0% |
| !! | AATATGTATTAAGCAAAAAG+GGG | + | chr5_1:66259800-66259819 | None:intergenic | 20.0% |
| !! | AAGACATTATACTAACTAAA+GGG | + | chr5_1:66260513-66260532 | None:intergenic | 20.0% |
| !! | AAAGACATTATACTAACTAA+AGG | + | chr5_1:66260514-66260533 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGAAATTTCTAGA+AGG | - | chr5_1:66261470-66261489 | Msa0745150:CDS | 20.0% |
| !!! | TTGTTTTGAAATTTCTAGAA+GGG | - | chr5_1:66261471-66261490 | Msa0745150:CDS | 20.0% |
| !! | TATATGTAGAAATAAGTAGA+TGG | + | chr5_1:66261816-66261835 | None:intergenic | 20.0% |
| ! | AAGGAAAAAATGTTTACAGA+AGG | - | chr5_1:66254102-66254121 | Msa0745150:three_prime_UTR | 25.0% |
| ! | AAAAATGTTTACAGAAGGAT+TGG | - | chr5_1:66254107-66254126 | Msa0745150:three_prime_UTR | 25.0% |
| !!! | CTTTTTCGATTAATGAAACA+GGG | - | chr5_1:66254307-66254326 | Msa0745150:three_prime_UTR | 25.0% |
| ! | AGTGAGATTATTATTGGAAA+GGG | + | chr5_1:66254428-66254447 | None:intergenic | 25.0% |
| ! | TTTAGGAGTGAGATTATTAT+TGG | + | chr5_1:66254434-66254453 | None:intergenic | 25.0% |
| !!! | AATTTTAAAGGAGGTAAAGA+TGG | + | chr5_1:66254460-66254479 | None:intergenic | 25.0% |
| !!! | GAAGAATTGAATTTTAAAGG+AGG | + | chr5_1:66254469-66254488 | None:intergenic | 25.0% |
| !!! | CTTCTAGAATTAACAGTATT+AGG | + | chr5_1:66254769-66254788 | None:intergenic | 25.0% |
| !! | AATTCTAGAAGATTTACTGA+TGG | - | chr5_1:66254778-66254797 | Msa0745150:intron | 25.0% |
| !! | TTTGAATGATTCTGTTGATT+TGG | - | chr5_1:66254900-66254919 | Msa0745150:intron | 25.0% |
| ! | ACATAATTCAATGTAATCGT+CGG | - | chr5_1:66255238-66255257 | Msa0745150:CDS | 25.0% |
| ! | TATATATAGCAGTTAGTACA+TGG | - | chr5_1:66255492-66255511 | Msa0745150:intron | 25.0% |
| !!! | GTTTAATTTTCATGCACTTT+TGG | - | chr5_1:66255586-66255605 | Msa0745150:CDS | 25.0% |
| !! | GTTTTACAAAAACACCTATT+TGG | - | chr5_1:66256016-66256035 | Msa0745150:CDS | 25.0% |
| ! | AGAAATAAGAGAAATGATTG+AGG | + | chr5_1:66256055-66256074 | None:intergenic | 25.0% |
| ! | TGGTTGTATTTGATATTGTT+TGG | - | chr5_1:66256344-66256363 | Msa0745150:CDS | 25.0% |
| ! | TATACAAAGAAGAAAACTGA+AGG | - | chr5_1:66256433-66256452 | Msa0745150:intron | 25.0% |
| ! | ATACAAAGAAGAAAACTGAA+GGG | - | chr5_1:66256434-66256453 | Msa0745150:intron | 25.0% |
| ! | CCTTTAACTCATTCATATAT+AGG | + | chr5_1:66256692-66256711 | None:intergenic | 25.0% |
| ! | CCTATATATGAATGAGTTAA+AGG | - | chr5_1:66256689-66256708 | Msa0745150:CDS | 25.0% |
| !! | TATATGCTTTTACTACTTGA+TGG | - | chr5_1:66257001-66257020 | Msa0745150:intron | 25.0% |
| ! | ATCTTAAGAGATCTTATAAC+TGG | - | chr5_1:66257221-66257240 | Msa0745150:CDS | 25.0% |
| ! | ATAAATTTGGATGGTGTAAA+GGG | + | chr5_1:66257416-66257435 | None:intergenic | 25.0% |
| ! | TAAAATCAGGTTATCAGTTT+AGG | - | chr5_1:66257830-66257849 | Msa0745150:CDS | 25.0% |
| !!! | TATTATTTTTGCCTTGTTAG+GGG | + | chr5_1:66258220-66258239 | None:intergenic | 25.0% |
| !!! | CTTATTATTTTTGCCTTGTT+AGG | + | chr5_1:66258222-66258241 | None:intergenic | 25.0% |
| ! | TTCTTGTAGATATCTATTAC+AGG | - | chr5_1:66258310-66258329 | Msa0745150:intron | 25.0% |
| ! | TATCTGATAAAAACAAATGG+AGG | - | chr5_1:66258617-66258636 | Msa0745150:intron | 25.0% |
| !! | ATTTTTACCTTGAGTTACTT+TGG | - | chr5_1:66258899-66258918 | Msa0745150:CDS | 25.0% |
| !!! | TTTTTACCTTGAGTTACTTT+GGG | - | chr5_1:66258900-66258919 | Msa0745150:CDS | 25.0% |
| !!! | CAAAATGAGACTTTTTGTTT+TGG | - | chr5_1:66259352-66259371 | Msa0745150:intron | 25.0% |
| !!! | TACAAAGGTTTTTTATCTTC+AGG | + | chr5_1:66259514-66259533 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTTTCAACACTAG+GGG | - | chr5_1:66259681-66259700 | Msa0745150:CDS | 25.0% |
| ! | ATATGTATTAAGCAAAAAGG+GGG | + | chr5_1:66259799-66259818 | None:intergenic | 25.0% |
| !! | AATTTTCAGTTCAATTGACT+TGG | - | chr5_1:66259851-66259870 | Msa0745150:intron | 25.0% |
| ! | GAAATGATATTGTAATCTTG+TGG | + | chr5_1:66260089-66260108 | None:intergenic | 25.0% |
| ! | GTAATTGTGAAACAAATTTC+TGG | + | chr5_1:66260162-66260181 | None:intergenic | 25.0% |
| ! | TTTGTTTCACAATTACATCA+TGG | - | chr5_1:66260166-66260185 | Msa0745150:intron | 25.0% |
| !! | ACTTACATTTTCCAAATACA+AGG | + | chr5_1:66260462-66260481 | None:intergenic | 25.0% |
| !!! | TTGCAAATAAGTTTTGTATC+TGG | + | chr5_1:66261012-66261031 | None:intergenic | 25.0% |
| ! | ACTTATTTGCAAGCAATAAT+AGG | - | chr5_1:66261020-66261039 | Msa0745150:intron | 25.0% |
| ! | CTTATTTGCAAGCAATAATA+GGG | - | chr5_1:66261021-66261040 | Msa0745150:intron | 25.0% |
| ! | TACTAGTTGTATATTGTAGT+TGG | + | chr5_1:66261351-66261370 | None:intergenic | 25.0% |
| ! | AAAACAATCTATCACATTAG+AGG | + | chr5_1:66261458-66261477 | None:intergenic | 25.0% |
| ! | GAAAATAGAATATGGTACAA+TGG | - | chr5_1:66261500-66261519 | Msa0745150:CDS | 25.0% |
| ! | ATGTTTCACTTTGTAGATAT+TGG | - | chr5_1:66261662-66261681 | Msa0745150:CDS | 25.0% |
| ! | TAATAGAATCTCTTTCTTGT+TGG | + | chr5_1:66262013-66262032 | None:intergenic | 25.0% |
| ! | ATTCCTTTACAAAAGTGATA+GGG | + | chr5_1:66262115-66262134 | None:intergenic | 25.0% |
| AGAAGAAAGAAGGTTAAGTT+AGG | + | chr5_1:66254169-66254188 | None:intergenic | 30.0% | |
| AGGAAAGTTTGAGTATAAAC+TGG | + | chr5_1:66254289-66254308 | None:intergenic | 30.0% | |
| CCTGTTTCATTAATCGAAAA+AGG | + | chr5_1:66254309-66254328 | None:intergenic | 30.0% | |
| !!! | CCTTTTTCGATTAATGAAAC+AGG | - | chr5_1:66254306-66254325 | Msa0745150:three_prime_UTR | 30.0% |
| GAGTGAGATTATTATTGGAA+AGG | + | chr5_1:66254429-66254448 | None:intergenic | 30.0% | |
| TCATCATAACATTGTGCAAT+TGG | + | chr5_1:66254643-66254662 | None:intergenic | 30.0% | |
| AATTGCACAATGTTATGATG+AGG | - | chr5_1:66254642-66254661 | Msa0745150:intron | 30.0% | |
| TATGATGAGGAACAGTTATT+TGG | - | chr5_1:66254655-66254674 | Msa0745150:intron | 30.0% | |
| ! | CAGTTATTTGGATTTGGTAA+TGG | - | chr5_1:66254667-66254686 | Msa0745150:intron | 30.0% |
| ! | CAAAATTCCACTAGGTTTTA+GGG | + | chr5_1:66254707-66254726 | None:intergenic | 30.0% |
| ! | TCAAAATTCCACTAGGTTTT+AGG | + | chr5_1:66254708-66254727 | None:intergenic | 30.0% |
| ! | TAAAACCTAGTGGAATTTTG+AGG | - | chr5_1:66254707-66254726 | Msa0745150:intron | 30.0% |
| GTAACACAAAGCAACAAAAA+AGG | + | chr5_1:66255151-66255170 | None:intergenic | 30.0% | |
| CTGTAAATTTCAACATCAGA+AGG | + | chr5_1:66255369-66255388 | None:intergenic | 30.0% | |
| TTATTGAGATATTGCAAGTG+TGG | + | chr5_1:66255438-66255457 | None:intergenic | 30.0% | |
| ACTTGCAATATCTCAATAAC+AGG | - | chr5_1:66255439-66255458 | Msa0745150:intron | 30.0% | |
| GATCAATGTATAAGCAAGTT+GGG | - | chr5_1:66256474-66256493 | Msa0745150:intron | 30.0% | |
| AAATGAATCAGAGTCATGTT+CGG | - | chr5_1:66256775-66256794 | Msa0745150:CDS | 30.0% | |
| ! | TCTTATATGTTTCTAACAGC+AGG | + | chr5_1:66256910-66256929 | None:intergenic | 30.0% |
| ! | ATTCTTATGTTTCTAACAGC+AGG | + | chr5_1:66257046-66257065 | None:intergenic | 30.0% |
| TTTAGACTATTGTCGAAGAA+AGG | - | chr5_1:66257093-66257112 | Msa0745150:CDS | 30.0% | |
| !! | TTGCTTTTCAACTGTTAAGA+AGG | + | chr5_1:66257141-66257160 | None:intergenic | 30.0% |
| CACATACAGGATTATCATTA+AGG | + | chr5_1:66257350-66257369 | None:intergenic | 30.0% | |
| GGAATGTCTATGAACAAATA+TGG | + | chr5_1:66257385-66257404 | None:intergenic | 30.0% | |
| CATAAATTTGGATGGTGTAA+AGG | + | chr5_1:66257417-66257436 | None:intergenic | 30.0% | |
| ! | CATGATGATAATGAATGTGT+TGG | - | chr5_1:66257495-66257514 | Msa0745150:intron | 30.0% |
| TGGTGACAACAATCATATAA+AGG | - | chr5_1:66257554-66257573 | Msa0745150:intron | 30.0% | |
| AAAAAAGTTACACGGTATCA+AGG | - | chr5_1:66257693-66257712 | Msa0745150:intron | 30.0% | |
| !! | ATTTCTTTACCCTATTTCTG+AGG | - | chr5_1:66257766-66257785 | Msa0745150:intron | 30.0% |
| !! | TTTCTTTACCCTATTTCTGA+GGG | - | chr5_1:66257767-66257786 | Msa0745150:intron | 30.0% |
| AACATTTACCCTCAGAAATA+GGG | + | chr5_1:66257778-66257797 | None:intergenic | 30.0% | |
| CATATCCACTACTTAAAATC+AGG | - | chr5_1:66257817-66257836 | Msa0745150:intron | 30.0% | |
| !! | GATAACCTGATTTTAAGTAG+TGG | + | chr5_1:66257825-66257844 | None:intergenic | 30.0% |
| !! | TTCCTATGAGTAGTTTTACT+TGG | - | chr5_1:66257912-66257931 | Msa0745150:CDS | 30.0% |
| !! | TCCTATGAGTAGTTTTACTT+GGG | - | chr5_1:66257913-66257932 | Msa0745150:CDS | 30.0% |
| TCAAGCCTATGATATATTGT+TGG | - | chr5_1:66258051-66258070 | Msa0745150:intron | 30.0% | |
| CCTCAATTTAGCATATGAAT+CGG | + | chr5_1:66258176-66258195 | None:intergenic | 30.0% | |
| GAGAAATCCTTTGTAGATAA+GGG | - | chr5_1:66258672-66258691 | Msa0745150:intron | 30.0% | |
| AGAAATCCTTTGTAGATAAG+GGG | - | chr5_1:66258673-66258692 | Msa0745150:intron | 30.0% | |
| TTGGATGAATGAGAAAGAAT+AGG | + | chr5_1:66258724-66258743 | None:intergenic | 30.0% | |
| !!! | TCTCATTTTGTTATTGTTGC+AGG | + | chr5_1:66259342-66259361 | None:intergenic | 30.0% |
| AACAACCATAATACAATCCA+TGG | - | chr5_1:66259572-66259591 | Msa0745150:intron | 30.0% | |
| ! | CATATTTTTCCCAGGTATTT+TGG | - | chr5_1:66259599-66259618 | Msa0745150:intron | 30.0% |
| AAAATTCAGGCTGTATTTAG+TGG | + | chr5_1:66260061-66260080 | None:intergenic | 30.0% | |
| ! | TCTTGTGGAATCTAAAATTC+AGG | + | chr5_1:66260074-66260093 | None:intergenic | 30.0% |
| TTCACAATTACATCATGGTT+TGG | - | chr5_1:66260171-66260190 | Msa0745150:intron | 30.0% | |
| TGATCTTTGTAAAGCAGAAA+AGG | - | chr5_1:66260220-66260239 | Msa0745150:intron | 30.0% | |
| TCATTTGTTTGTAAGAAGGA+GGG | + | chr5_1:66260313-66260332 | None:intergenic | 30.0% | |
| !! | TGTGTCATTTGTTTGTAAGA+AGG | + | chr5_1:66260317-66260336 | None:intergenic | 30.0% |
| TTCTTACAAACAAATGACAC+AGG | - | chr5_1:66260316-66260335 | Msa0745150:CDS | 30.0% | |
| ! | TCATACATTTTCTCAGCAAA+TGG | + | chr5_1:66260380-66260399 | None:intergenic | 30.0% |
| ! | TATTGATTACCACTTCATAC+TGG | + | chr5_1:66260424-66260443 | None:intergenic | 30.0% |
| ATGAAGTGGTAATCAATAGA+TGG | - | chr5_1:66260426-66260445 | Msa0745150:intron | 30.0% | |
| ! | AAATGCACATAGAACGTTTT+AGG | + | chr5_1:66260485-66260504 | None:intergenic | 30.0% |
| ! | GTATATTTCCCTTTTCATTC+TGG | - | chr5_1:66260573-66260592 | Msa0745150:intron | 30.0% |
| TTTGGTATGCTATCTTTCAA+AGG | + | chr5_1:66260668-66260687 | None:intergenic | 30.0% | |
| ! | AACAATTTGTTTCATCCAGT+TGG | - | chr5_1:66260836-66260855 | Msa0745150:CDS | 30.0% |
| ! | ACAATTTGTTTCATCCAGTT+GGG | - | chr5_1:66260837-66260856 | Msa0745150:CDS | 30.0% |
| ATATAGAGCCAACATGAATA+GGG | + | chr5_1:66261083-66261102 | None:intergenic | 30.0% | |
| GACATATTGCTATGAAGATT+TGG | + | chr5_1:66261296-66261315 | None:intergenic | 30.0% | |
| !!! | TTTTGAAATTTCTAGAAGGG+AGG | - | chr5_1:66261474-66261493 | Msa0745150:CDS | 30.0% |
| GGAGGAAAGAAAATAGAATA+TGG | - | chr5_1:66261492-66261511 | Msa0745150:CDS | 30.0% | |
| ACACAAGAAAAAGACAACAT+AGG | + | chr5_1:66261569-66261588 | None:intergenic | 30.0% | |
| CATTCCTTTACAAAAGTGAT+AGG | + | chr5_1:66262116-66262135 | None:intergenic | 30.0% | |
| ACTTCTCCGAACTCAAAAAA+AGG | - | chr5_1:66254083-66254102 | Msa0745150:three_prime_UTR | 35.0% | |
| AGAAAGAAGGTTAAGTTAGG+TGG | + | chr5_1:66254166-66254185 | None:intergenic | 35.0% | |
| !!! | GGTGATTTTTTCTCAGTTAG+AGG | + | chr5_1:66254376-66254395 | None:intergenic | 35.0% |
| ! | ATCATCTTCGTTTTCGTCAT+CGG | + | chr5_1:66254593-66254612 | None:intergenic | 35.0% |
| ACGAAAACGAAGATGATGAA+AGG | - | chr5_1:66254596-66254615 | Msa0745150:intron | 35.0% | |
| CGAAAACGAAGATGATGAAA+GGG | - | chr5_1:66254597-66254616 | Msa0745150:intron | 35.0% | |
| GAGGAACAGTTATTTGGATT+TGG | - | chr5_1:66254661-66254680 | Msa0745150:intron | 35.0% | |
| AGATTTACTGATGGAGAGTT+AGG | - | chr5_1:66254787-66254806 | Msa0745150:intron | 35.0% | |
| TCACCATCAACAAATATAGG+AGG | + | chr5_1:66254940-66254959 | None:intergenic | 35.0% | |
| CCTTCACCATCAACAAATAT+AGG | + | chr5_1:66254943-66254962 | None:intergenic | 35.0% | |
| !! | CCTATATTTGTTGATGGTGA+AGG | - | chr5_1:66254940-66254959 | Msa0745150:CDS | 35.0% |
| GATTCTGTGAATTGTGATGA+TGG | - | chr5_1:66255048-66255067 | Msa0745150:CDS | 35.0% | |
| TACCTTTCAGCAACAGTATT+AGG | + | chr5_1:66255108-66255127 | None:intergenic | 35.0% | |
| !! | ACTCATCTTTTAGAAACTCC+GGG | + | chr5_1:66255957-66255976 | None:intergenic | 35.0% |
| !! | CACTCATCTTTTAGAAACTC+CGG | + | chr5_1:66255958-66255977 | None:intergenic | 35.0% |
| ! | GTTTCTAAAAGATGAGTGTC+TGG | - | chr5_1:66255960-66255979 | Msa0745150:intron | 35.0% |
| GACAATGAATGAAGCCAAAT+AGG | + | chr5_1:66256033-66256052 | None:intergenic | 35.0% | |
| CTTGCTTATACATTGATCCT+CGG | + | chr5_1:66256472-66256491 | None:intergenic | 35.0% | |
| GGATCAATGTATAAGCAAGT+TGG | - | chr5_1:66256473-66256492 | Msa0745150:intron | 35.0% | |
| ! | AATGTATAAGCAAGTTGGGA+TGG | - | chr5_1:66256478-66256497 | Msa0745150:intron | 35.0% |
| !! | CTGTATACCACTTTTCACAA+GGG | + | chr5_1:66256525-66256544 | None:intergenic | 35.0% |
| !! | ACTGTATACCACTTTTCACA+AGG | + | chr5_1:66256526-66256545 | None:intergenic | 35.0% |
| AAGTGGTATACAGTCTATGA+AGG | - | chr5_1:66256532-66256551 | Msa0745150:intron | 35.0% | |
| AGAAGGTTAGTGCATATTTG+AGG | - | chr5_1:66256577-66256596 | Msa0745150:intron | 35.0% | |
| CTCAACTTATCAGCTATGAA+TGG | + | chr5_1:66256632-66256651 | None:intergenic | 35.0% | |
| AGTTGGATCAAACAATGCAT+TGG | + | chr5_1:66256737-66256756 | None:intergenic | 35.0% | |
| ! | AGAAGTCCAAGATTCTAAGA+AGG | - | chr5_1:66257290-66257309 | Msa0745150:intron | 35.0% |
| AAGGTAAGAAATTGGAATCC+TGG | + | chr5_1:66257331-66257350 | None:intergenic | 35.0% | |
| ATATGCAGAGTGACAGAATT+CGG | - | chr5_1:66257457-66257476 | Msa0745150:intron | 35.0% | |
| ! | ATTGGAAGTACAATGACAAG+TGG | - | chr5_1:66257534-66257553 | Msa0745150:intron | 35.0% |
| ACGGTATCAAGGATTATAGA+TGG | - | chr5_1:66257704-66257723 | Msa0745150:intron | 35.0% | |
| CAACATTTACCCTCAGAAAT+AGG | + | chr5_1:66257779-66257798 | None:intergenic | 35.0% | |
| AACTAACAAGTCCTCTCTAT+CGG | + | chr5_1:66257883-66257902 | None:intergenic | 35.0% | |
| ACCCAAGTAAAACTACTCAT+AGG | + | chr5_1:66257917-66257936 | None:intergenic | 35.0% | |
| !! | AGGATTATGTTGGTGGTTAT+TGG | + | chr5_1:66257945-66257964 | None:intergenic | 35.0% |
| AAAGCAGGAAAGGATTATGT+TGG | + | chr5_1:66257955-66257974 | None:intergenic | 35.0% | |
| TCAAACTCAGAATGAAAAGC+AGG | + | chr5_1:66257970-66257989 | None:intergenic | 35.0% | |
| AGCCTATGATATATTGTTGG+AGG | - | chr5_1:66258054-66258073 | Msa0745150:intron | 35.0% | |
| GCCTATGATATATTGTTGGA+GGG | - | chr5_1:66258055-66258074 | Msa0745150:intron | 35.0% | |
| ACCCTCCAACAATATATCAT+AGG | + | chr5_1:66258059-66258078 | None:intergenic | 35.0% | |
| CCGATTCATATGCTAAATTG+AGG | - | chr5_1:66258173-66258192 | Msa0745150:CDS | 35.0% | |
| TGAGGTAGTTGAATATCATC+TGG | - | chr5_1:66258191-66258210 | Msa0745150:CDS | 35.0% | |
| ATATCTACAAGAAGACCACA+AGG | + | chr5_1:66258303-66258322 | None:intergenic | 35.0% | |
| ! | GTTAGGATATAAGGACTAGT+TGG | - | chr5_1:66258567-66258586 | Msa0745150:intron | 35.0% |
| GGAGAAATCCTTTGTAGATA+AGG | - | chr5_1:66258671-66258690 | Msa0745150:intron | 35.0% | |
| !! | CTCACAGAGAAGTATACTTT+TGG | - | chr5_1:66258958-66258977 | Msa0745150:CDS | 35.0% |
| AAATGATCGGTTAAACCTGT+TGG | + | chr5_1:66259055-66259074 | None:intergenic | 35.0% | |
| ! | ACAGGTTTAACCGATCATTT+TGG | - | chr5_1:66259055-66259074 | Msa0745150:intron | 35.0% |
| AGATGCTAGACCAAAATGAT+CGG | + | chr5_1:66259068-66259087 | None:intergenic | 35.0% | |
| TATTCTACAGAACTATCTGC+AGG | - | chr5_1:66259168-66259187 | Msa0745150:intron | 35.0% | |
| AATGTAACTGAGCCTTGAAA+AGG | - | chr5_1:66259235-66259254 | Msa0745150:intron | 35.0% | |
| ! | GGTATCACTAAACCTTTTCA+AGG | + | chr5_1:66259250-66259269 | None:intergenic | 35.0% |
| ATGATCCAGAAGACTTTATG+AGG | + | chr5_1:66259318-66259337 | None:intergenic | 35.0% | |
| AAGGTGTAGAAAACACATGA+TGG | - | chr5_1:66259418-66259437 | Msa0745150:intron | 35.0% | |
| GAATTGTAGCCAAAATACCT+GGG | + | chr5_1:66259611-66259630 | None:intergenic | 35.0% | |
| AGAATTGTAGCCAAAATACC+TGG | + | chr5_1:66259612-66259631 | None:intergenic | 35.0% | |
| ATCTCGAGTCATGGAATATA+AGG | - | chr5_1:66260006-66260025 | Msa0745150:intron | 35.0% | |
| GTCATTTGTTTGTAAGAAGG+AGG | + | chr5_1:66260314-66260333 | None:intergenic | 35.0% | |
| CAACTTAATCCAGTATGAAG+TGG | - | chr5_1:66260412-66260431 | Msa0745150:intron | 35.0% | |
| !! | TCCAAATACAAGGAGTATTG+AGG | + | chr5_1:66260452-66260471 | None:intergenic | 35.0% |
| ! | ATTTCCCTTTTCATTCTGGA+AGG | - | chr5_1:66260577-66260596 | Msa0745150:intron | 35.0% |
| CAGAGATAACTTACTTGGTT+AGG | + | chr5_1:66260752-66260771 | None:intergenic | 35.0% | |
| TGTTCAAGAATATACCCAAC+TGG | + | chr5_1:66260854-66260873 | None:intergenic | 35.0% | |
| TATTCTTGAACACCATCAAG+AGG | - | chr5_1:66260862-66260881 | Msa0745150:intron | 35.0% | |
| TGGAAGACATCCTAAATTCA+TGG | - | chr5_1:66260910-66260929 | Msa0745150:intron | 35.0% | |
| GGAAGACATCCTAAATTCAT+GGG | - | chr5_1:66260911-66260930 | Msa0745150:intron | 35.0% | |
| ATGGGAGATAAGAAGTTGTT+TGG | - | chr5_1:66260951-66260970 | Msa0745150:intron | 35.0% | |
| TTGTTTGGAGAGCAAATGAA+TGG | - | chr5_1:66260966-66260985 | Msa0745150:intron | 35.0% | |
| TATAGAGCCAACATGAATAG+GGG | + | chr5_1:66261082-66261101 | None:intergenic | 35.0% | |
| GATATAGAGCCAACATGAAT+AGG | + | chr5_1:66261084-66261103 | None:intergenic | 35.0% | |
| CCTTGAATCTGAACAATTTG+TGG | + | chr5_1:66261135-66261154 | None:intergenic | 35.0% | |
| CCACAAATTGTTCAGATTCA+AGG | - | chr5_1:66261132-66261151 | Msa0745150:intron | 35.0% | |
| ! | TTCAAGGTAATAAGAGCACA+CGG | - | chr5_1:66261148-66261167 | Msa0745150:CDS | 35.0% |
| TATTGCTATGAAGATTTGGC+TGG | + | chr5_1:66261292-66261311 | None:intergenic | 35.0% | |
| ATCTTCATAGCAATATGTCG+TGG | - | chr5_1:66261297-66261316 | Msa0745150:CDS | 35.0% | |
| TCTCAGATGCAAAGATTAAG+AGG | - | chr5_1:66261699-66261718 | Msa0745150:CDS | 35.0% | |
| !! | AAAAGTGTTCTCGCTTGTAA+AGG | - | chr5_1:66261948-66261967 | Msa0745150:intron | 35.0% |
| ! | AAAGTGTTCTCGCTTGTAAA+GGG | - | chr5_1:66261949-66261968 | Msa0745150:intron | 35.0% |
| TCGCTTGTAAAGGGAAAATT+AGG | - | chr5_1:66261958-66261977 | Msa0745150:intron | 35.0% | |
| CGCTTGTAAAGGGAAAATTA+GGG | - | chr5_1:66261959-66261978 | Msa0745150:intron | 35.0% | |
| AATTTCCTTCACGAAGAGTA+TGG | - | chr5_1:66262049-66262068 | Msa0745150:intron | 35.0% | |
| CACTCTTATTGGTAAGAGAT+TGG | + | chr5_1:66262089-66262108 | None:intergenic | 35.0% | |
| CAATCTCTTACCAATAAGAG+TGG | - | chr5_1:66262087-66262106 | Msa0745150:intron | 35.0% | |
| !! | GTACCCTATCACTTTTGTAA+AGG | - | chr5_1:66262109-66262128 | Msa0745150:CDS | 35.0% |
| CGGAGAAGTAGAAGAATCAA+TGG | + | chr5_1:66254072-66254091 | None:intergenic | 40.0% | |
| TGGTTACCTTGTTGATCCAT+TGG | + | chr5_1:66254146-66254165 | None:intergenic | 40.0% | |
| ACACCTATTGTGATTCGATC+CGG | - | chr5_1:66254228-66254247 | Msa0745150:three_prime_UTR | 40.0% | |
| AAAAGAGGTGATCTAGGAAG+AGG | + | chr5_1:66254397-66254416 | None:intergenic | 40.0% | |
| GGAGGTAAAGATGGAGATTT+AGG | + | chr5_1:66254451-66254470 | None:intergenic | 40.0% | |
| !! | ACCTAGTGGAATTTTGAGGA+AGG | - | chr5_1:66254711-66254730 | Msa0745150:intron | 40.0% |
| !! | CCTAGTGGAATTTTGAGGAA+GGG | - | chr5_1:66254712-66254731 | Msa0745150:intron | 40.0% |
| !! | TGGAATTTTGAGGAAGGGTT+TGG | - | chr5_1:66254717-66254736 | Msa0745150:CDS | 40.0% |
| CAGAAGAAAATGACTCCATG+TGG | - | chr5_1:66254826-66254845 | Msa0745150:intron | 40.0% | |
| ACTCCATGTGGAAGTGAAAT+TGG | - | chr5_1:66254838-66254857 | Msa0745150:intron | 40.0% | |
| GTACCAATTTCACTTCCACA+TGG | + | chr5_1:66254844-66254863 | None:intergenic | 40.0% | |
| AAATTGGTACTGCTGGAAGA+GGG | - | chr5_1:66254854-66254873 | Msa0745150:intron | 40.0% | |
| !! | ACAAATATAGGAGGAGCACT+TGG | + | chr5_1:66254931-66254950 | None:intergenic | 40.0% |
| ! | GCTCCTCCTATATTTGTTGA+TGG | - | chr5_1:66254934-66254953 | Msa0745150:CDS | 40.0% |
| ! | TGAAGGTGATGTCGGTTATT+CGG | - | chr5_1:66254957-66254976 | Msa0745150:CDS | 40.0% |
| !! | TCTGTGAATTGTGATGATGG+AGG | - | chr5_1:66255051-66255070 | Msa0745150:CDS | 40.0% |
| TGCCTAATACTGTTGCTGAA+AGG | - | chr5_1:66255103-66255122 | Msa0745150:intron | 40.0% | |
| !! | GTGTTACTTTCCATGAAGCA+CGG | - | chr5_1:66255164-66255183 | Msa0745150:intron | 40.0% |
| ATGAAGCACGGACACAAAAT+CGG | - | chr5_1:66255176-66255195 | Msa0745150:intron | 40.0% | |
| TTCAATGTAATCGTCGGTGT+CGG | - | chr5_1:66255244-66255263 | Msa0745150:CDS | 40.0% | |
| TCAAGAAACAACCTCTACAC+AGG | - | chr5_1:66255389-66255408 | Msa0745150:intron | 40.0% | |
| CAAGAAACAACCTCTACACA+GGG | - | chr5_1:66255390-66255409 | Msa0745150:intron | 40.0% | |
| TTGAGATATTGCAAGTGTGG+AGG | + | chr5_1:66255435-66255454 | None:intergenic | 40.0% | |
| GAAAACCTGCATCATAAGAG+TGG | + | chr5_1:66255706-66255725 | None:intergenic | 40.0% | |
| !! | CTCATCTTTTAGAAACTCCG+GGG | + | chr5_1:66255956-66255975 | None:intergenic | 40.0% |
| ACCAAATGAAACCTACCCAA+AGG | + | chr5_1:66255998-66256017 | None:intergenic | 40.0% | |
| TTCCTTGTACTACCTTCAGT+TGG | + | chr5_1:66256127-66256146 | None:intergenic | 40.0% | |
| ACAACCTTCTTTGTCTTGAG+AGG | + | chr5_1:66256166-66256185 | None:intergenic | 40.0% | |
| TCTCAAGACAAAGAAGGTTG+TGG | - | chr5_1:66256165-66256184 | Msa0745150:intron | 40.0% | |
| CTCAAGACAAAGAAGGTTGT+GGG | - | chr5_1:66256166-66256185 | Msa0745150:intron | 40.0% | |
| TCAAGACAAAGAAGGTTGTG+GGG | - | chr5_1:66256167-66256186 | Msa0745150:intron | 40.0% | |
| TACATATATGCGCACGTGTT+TGG | + | chr5_1:66256300-66256319 | None:intergenic | 40.0% | |
| GTTTCATCCCTTGTGAAAAG+TGG | - | chr5_1:66256515-66256534 | Msa0745150:intron | 40.0% | |
| GGTTAGTGCATATTTGAGGA+AGG | - | chr5_1:66256581-66256600 | Msa0745150:intron | 40.0% | |
| CATGATAATCTCCACTTCCA+GGG | + | chr5_1:66256814-66256833 | None:intergenic | 40.0% | |
| TCATGATAATCTCCACTTCC+AGG | + | chr5_1:66256815-66256834 | None:intergenic | 40.0% | |
| ATGGTGTAAAGGGAAAGAAG+AGG | + | chr5_1:66257406-66257425 | None:intergenic | 40.0% | |
| TTGTACTTCCAATTGAGAGC+TGG | + | chr5_1:66257527-66257546 | None:intergenic | 40.0% | |
| ! | TCATCTTCCAAGTTGACAAC+TGG | - | chr5_1:66257659-66257678 | Msa0745150:intron | 40.0% |
| TCTTTGTCCAGTTGTCAACT+TGG | + | chr5_1:66257669-66257688 | None:intergenic | 40.0% | |
| CTGAGGGTAAATGTTGTTGA+TGG | - | chr5_1:66257783-66257802 | Msa0745150:intron | 40.0% | |
| ! | GGTAAATGTTGTTGATGGAG+AGG | - | chr5_1:66257788-66257807 | Msa0745150:intron | 40.0% |
| CTCAGAATGAAAAGCAGGAA+AGG | + | chr5_1:66257965-66257984 | None:intergenic | 40.0% | |
| CTGCAGTGTATGCAAAAACA+GGG | + | chr5_1:66258011-66258030 | None:intergenic | 40.0% | |
| TCTGCAGTGTATGCAAAAAC+AGG | + | chr5_1:66258012-66258031 | None:intergenic | 40.0% | |
| GCATCTAACAACCATTTCCA+TGG | + | chr5_1:66258130-66258149 | None:intergenic | 40.0% | |
| ! | GATGCATTTGCTGACTACTA+TGG | - | chr5_1:66258145-66258164 | Msa0745150:CDS | 40.0% |
| GTTACTTGATCCCCTAATGA+AGG | - | chr5_1:66258382-66258401 | Msa0745150:intron | 40.0% | |
| TCTGTACATTGACGAATTCG+TGG | - | chr5_1:66258645-66258664 | Msa0745150:intron | 40.0% | |
| ACATTGACGAATTCGTGGAT+AGG | - | chr5_1:66258650-66258669 | Msa0745150:intron | 40.0% | |
| TGGTTTCCCCTTATCTACAA+AGG | + | chr5_1:66258682-66258701 | None:intergenic | 40.0% | |
| TGTAGATAAGGGGAAACCAT+TGG | - | chr5_1:66258683-66258702 | Msa0745150:CDS | 40.0% | |
| GCAAATCCCAAAGTAACTCA+AGG | + | chr5_1:66258909-66258928 | None:intergenic | 40.0% | |
| !! | ATACCTTCTGCTGGTTTATG+AGG | - | chr5_1:66259265-66259284 | Msa0745150:intron | 40.0% |
| TACCTCCTCATAAAGTCTTC+TGG | - | chr5_1:66259310-66259329 | Msa0745150:intron | 40.0% | |
| ATCCAGAAGACTTTATGAGG+AGG | + | chr5_1:66259315-66259334 | None:intergenic | 40.0% | |
| GGAGACTGATGAATTTGTGT+CGG | - | chr5_1:66259439-66259458 | Msa0745150:CDS | 40.0% | |
| GAGACTGATGAATTTGTGTC+GGG | - | chr5_1:66259440-66259459 | Msa0745150:CDS | 40.0% | |
| TGCCTCAGAAAGTTACCAAA+TGG | - | chr5_1:66259463-66259482 | Msa0745150:CDS | 40.0% | |
| ! | GTCCATTTGGTAACTTTCTG+AGG | + | chr5_1:66259468-66259487 | None:intergenic | 40.0% |
| ! | AGATGGTAATGCTGTCCATT+TGG | + | chr5_1:66259481-66259500 | None:intergenic | 40.0% |
| ! | GCTGACCATGGATTGTATTA+TGG | + | chr5_1:66259580-66259599 | None:intergenic | 40.0% |
| TGGGAAAAATATGCTGACCA+TGG | + | chr5_1:66259592-66259611 | None:intergenic | 40.0% | |
| ! | ATGGTCAGCATATTTTTCCC+AGG | - | chr5_1:66259591-66259610 | Msa0745150:intron | 40.0% |
| ACACAGCTCTGTGCTATAAA+TGG | + | chr5_1:66259892-66259911 | None:intergenic | 40.0% | |
| ATAGCACAGAGCTGTGTAAA+AGG | - | chr5_1:66259895-66259914 | Msa0745150:intron | 40.0% | |
| TGAGAACTTTCCTTTCTGCA+TGG | - | chr5_1:66259919-66259938 | Msa0745150:intron | 40.0% | |
| ACTAGAAGCTCATTCACATG+TGG | + | chr5_1:66259963-66259982 | None:intergenic | 40.0% | |
| ACATGTGAATGAGCTTCTAG+TGG | - | chr5_1:66259962-66259981 | Msa0745150:intron | 40.0% | |
| TTCATGTTTCAGTTCTGTGC+AGG | - | chr5_1:66260124-66260143 | Msa0745150:CDS | 40.0% | |
| TCATGTTTCAGTTCTGTGCA+GGG | - | chr5_1:66260125-66260144 | Msa0745150:CDS | 40.0% | |
| AACAAATGACACAGGTTCCA+TGG | - | chr5_1:66260324-66260343 | Msa0745150:CDS | 40.0% | |
| ACAAATGACACAGGTTCCAT+GGG | - | chr5_1:66260325-66260344 | Msa0745150:CDS | 40.0% | |
| TGGTGAAGTGGAATGATTTG+TGG | + | chr5_1:66260360-66260379 | None:intergenic | 40.0% | |
| TTTCTCAGCAAATGGTGAAG+TGG | + | chr5_1:66260372-66260391 | None:intergenic | 40.0% | |
| GCCTCAATACTCCTTGTATT+TGG | - | chr5_1:66260448-66260467 | Msa0745150:intron | 40.0% | |
| ACAGCCTTCCAGAATGAAAA+GGG | + | chr5_1:66260584-66260603 | None:intergenic | 40.0% | |
| AGGCTGTGGCAAATATTGAA+AGG | - | chr5_1:66260597-66260616 | Msa0745150:intron | 40.0% | |
| GGCTGTGGCAAATATTGAAA+GGG | - | chr5_1:66260598-66260617 | Msa0745150:intron | 40.0% | |
| ACTTGCAAGTGAAGTCTCTT+TGG | + | chr5_1:66260686-66260705 | None:intergenic | 40.0% | |
| GCATGCAGAGATAACTTACT+TGG | + | chr5_1:66260757-66260776 | None:intergenic | 40.0% | |
| GACATCAAGTATCCTCTTGA+TGG | + | chr5_1:66260877-66260896 | None:intergenic | 40.0% | |
| TGATGTCCTACATTGTAGAG+TGG | - | chr5_1:66260890-66260909 | Msa0745150:intron | 40.0% | |
| TGTCTTCCACTCTACAATGT+AGG | + | chr5_1:66260899-66260918 | None:intergenic | 40.0% | |
| AACTTCTTATCTCCCATGAC+AGG | + | chr5_1:66260948-66260967 | None:intergenic | 40.0% | |
| !! | GTATCTGGTTCTCAGTAACA+CGG | + | chr5_1:66260997-66261016 | None:intergenic | 40.0% |
| TAAGACTCCCCTATTCATGT+TGG | - | chr5_1:66261072-66261091 | Msa0745150:intron | 40.0% | |
| ! | TAGCAATATGTCGTGGATTG+TGG | - | chr5_1:66261304-66261323 | Msa0745150:CDS | 40.0% |
| ! | AGCAATATGTCGTGGATTGT+GGG | - | chr5_1:66261305-66261324 | Msa0745150:CDS | 40.0% |
| TTCTTGTTGGCAAATGCCAT+GGG | + | chr5_1:66262000-66262019 | None:intergenic | 40.0% | |
| TTTCTTGTTGGCAAATGCCA+TGG | + | chr5_1:66262001-66262020 | None:intergenic | 40.0% | |
| ! | TGATAGGGTACCACTCTTAT+TGG | + | chr5_1:66262100-66262119 | None:intergenic | 40.0% |
| TGGATGAAACTGCACTCCAA+TGG | - | chr5_1:66254127-66254146 | Msa0745150:three_prime_UTR | 45.0% | |
| TGCACTCCAATGGATCAACA+AGG | - | chr5_1:66254137-66254156 | Msa0745150:three_prime_UTR | 45.0% | |
| GTTGCGAAAAGAGGTGATCT+AGG | + | chr5_1:66254403-66254422 | None:intergenic | 45.0% | |
| GAAAGGGTTGTTGCGAAAAG+AGG | + | chr5_1:66254412-66254431 | None:intergenic | 45.0% | |
| !!! | CCACTAGGTTTTAGGGCTTT+AGG | + | chr5_1:66254700-66254719 | None:intergenic | 45.0% |
| CCTAAAGCCCTAAAACCTAG+TGG | - | chr5_1:66254697-66254716 | Msa0745150:intron | 45.0% | |
| CCCTTCCTCAAAATTCCACT+AGG | + | chr5_1:66254715-66254734 | None:intergenic | 45.0% | |
| GGAAGTGAAATTGGTACTGC+TGG | - | chr5_1:66254847-66254866 | Msa0745150:intron | 45.0% | |
| GAAATTGGTACTGCTGGAAG+AGG | - | chr5_1:66254853-66254872 | Msa0745150:intron | 45.0% | |
| AATTGGTACTGCTGGAAGAG+GGG | - | chr5_1:66254855-66254874 | Msa0745150:intron | 45.0% | |
| !! | GTTGATGGTGAAGGTGATGT+CGG | - | chr5_1:66254949-66254968 | Msa0745150:CDS | 45.0% |
| !! | TTCATCGACTTGATTCGCCA+CGG | + | chr5_1:66254989-66255008 | None:intergenic | 45.0% |
| AAATGACTCAGCAGCAGGAT+AGG | - | chr5_1:66255007-66255026 | Msa0745150:CDS | 45.0% | |
| !! | GTGAATTGTGATGATGGAGG+AGG | - | chr5_1:66255054-66255073 | Msa0745150:CDS | 45.0% |
| ! | GATTTTGTGTCCGTGCTTCA+TGG | + | chr5_1:66255177-66255196 | None:intergenic | 45.0% |
| TTCTTGCATTAGACGTGTCC+TGG | + | chr5_1:66255289-66255308 | None:intergenic | 45.0% | |
| GAAGTGTGTGTGTGCTTCAT+AGG | - | chr5_1:66255306-66255325 | Msa0745150:CDS | 45.0% | |
| TCTTTCTATGCCCTGTGTAG+AGG | + | chr5_1:66255403-66255422 | None:intergenic | 45.0% | |
| TACACAGGGCATAGAAAGAC+AGG | - | chr5_1:66255404-66255423 | Msa0745150:intron | 45.0% | |
| AGATATTGCAAGTGTGGAGG+AGG | + | chr5_1:66255432-66255451 | None:intergenic | 45.0% | |
| AGTTGCCACTCTTATGATGC+AGG | - | chr5_1:66255698-66255717 | Msa0745150:intron | 45.0% | |
| GTAAGTGATAAGGGTTTGCC+AGG | + | chr5_1:66255881-66255900 | None:intergenic | 45.0% | |
| GCCTTTGGGTAGGTTTCATT+TGG | - | chr5_1:66255994-66256013 | Msa0745150:intron | 45.0% | |
| !! | TCAGTTGGCTTTATACCTCG+AGG | + | chr5_1:66256112-66256131 | None:intergenic | 45.0% |
| CGAGGTATAAAGCCAACTGA+AGG | - | chr5_1:66256112-66256131 | Msa0745150:intron | 45.0% | |
| AGCCAACTGAAGGTAGTACA+AGG | - | chr5_1:66256122-66256141 | Msa0745150:intron | 45.0% | |
| AGTGCCTCTCAAGACAAAGA+AGG | - | chr5_1:66256159-66256178 | Msa0745150:intron | 45.0% | |
| GGTTGTGGGGAAAATAAGAG+TGG | - | chr5_1:66256180-66256199 | Msa0745150:intron | 45.0% | |
| GTGGGGAAAATAAGAGTGGA+AGG | - | chr5_1:66256184-66256203 | Msa0745150:intron | 45.0% | |
| ! | TATGCGCACGTGTTTGGAAT+TGG | + | chr5_1:66256294-66256313 | None:intergenic | 45.0% |
| !! | AAGGGCACATTTTCAAACCG+AGG | - | chr5_1:66256452-66256471 | Msa0745150:intron | 45.0% |
| TCACTCTCAGTGACAGAAGA+AGG | - | chr5_1:66256560-66256579 | Msa0745150:intron | 45.0% | |
| CTTCTGTTGCACTCTTGAGT+TGG | + | chr5_1:66256754-66256773 | None:intergenic | 45.0% | |
| ! | ATTTTTCTTCGCCCTGGAAG+TGG | - | chr5_1:66256800-66256819 | Msa0745150:CDS | 45.0% |
| TGTCGAAGAAAGGTTACACG+AGG | - | chr5_1:66257103-66257122 | Msa0745150:CDS | 45.0% | |
| GTCGAAGAAAGGTTACACGA+GGG | - | chr5_1:66257104-66257123 | Msa0745150:CDS | 45.0% | |
| TTCAGTTTCCCATTGAGCCA+AGG | - | chr5_1:66257252-66257271 | Msa0745150:CDS | 45.0% | |
| TCAGTTTCCCATTGAGCCAA+GGG | - | chr5_1:66257253-66257272 | Msa0745150:CDS | 45.0% | |
| ! | CTACCAATAAAGCATCCCCT+TGG | + | chr5_1:66257272-66257291 | None:intergenic | 45.0% |
| GGACTGCCTTCTTAGAATCT+TGG | + | chr5_1:66257299-66257318 | None:intergenic | 45.0% | |
| ! | GATTCTAAGAAGGCAGTCCA+TGG | - | chr5_1:66257300-66257319 | Msa0745150:intron | 45.0% |
| GCAGGAAAGGATTATGTTGG+TGG | + | chr5_1:66257952-66257971 | None:intergenic | 45.0% | |
| TAGGCTTGAGTTTCCACAAC+AGG | + | chr5_1:66258040-66258059 | None:intergenic | 45.0% | |
| TCATCTGGATTCCCCTAACA+AGG | - | chr5_1:66258206-66258225 | Msa0745150:CDS | 45.0% | |
| TTGAACCTTCGCTTACCTTG+TGG | - | chr5_1:66258285-66258304 | Msa0745150:intron | 45.0% | |
| GAATGTAGCAACTCCAACCA+AGG | - | chr5_1:66258337-66258356 | Msa0745150:intron | 45.0% | |
| GTAACTCTTTCACAAGCTCC+AGG | + | chr5_1:66258367-66258386 | None:intergenic | 45.0% | |
| ! | TCACTTCTGGCCTTCATTAG+GGG | + | chr5_1:66258395-66258414 | None:intergenic | 45.0% |
| ! | CTCACTTCTGGCCTTCATTA+GGG | + | chr5_1:66258396-66258415 | None:intergenic | 45.0% |
| ! | TCTCACTTCTGGCCTTCATT+AGG | + | chr5_1:66258397-66258416 | None:intergenic | 45.0% |
| AGTCAGACTTCTCTCACTTC+TGG | + | chr5_1:66258408-66258427 | None:intergenic | 45.0% | |
| GAAGTGAGAGAAGTCTGACT+AGG | - | chr5_1:66258408-66258427 | Msa0745150:intron | 45.0% | |
| TGTAGAGCAGGATGTAAAGC+TGG | + | chr5_1:66259103-66259122 | None:intergenic | 45.0% | |
| CTACTGTAGACTTGTAGAGC+AGG | + | chr5_1:66259115-66259134 | None:intergenic | 45.0% | |
| GGTTTAGTGATACCTTCTGC+TGG | - | chr5_1:66259256-66259275 | Msa0745150:intron | 45.0% | |
| GAACCTCATAAACCAGCAGA+AGG | + | chr5_1:66259271-66259290 | None:intergenic | 45.0% | |
| GACAGACTGCAGCAAGAAAA+AGG | - | chr5_1:66259399-66259418 | Msa0745150:intron | 45.0% | |
| GGACAGCATTACCATCTCAA+CGG | - | chr5_1:66259484-66259503 | Msa0745150:CDS | 45.0% | |
| GCTGTATTTAGTGGTGCAAG+AGG | + | chr5_1:66260052-66260071 | None:intergenic | 45.0% | |
| CACAGCCTTCCAGAATGAAA+AGG | + | chr5_1:66260585-66260604 | None:intergenic | 45.0% | |
| !! | CTTTTCATTCTGGAAGGCTG+TGG | - | chr5_1:66260583-66260602 | Msa0745150:intron | 45.0% |
| GACAGGATGCCCATGAATTT+AGG | + | chr5_1:66260923-66260942 | None:intergenic | 45.0% | |
| ACGGCTGAAAAAGATGCTTG+AGG | - | chr5_1:66261167-66261186 | Msa0745150:CDS | 45.0% | |
| GAGAAGCAGAAGTTCGTGAA+AGG | - | chr5_1:66261208-66261227 | Msa0745150:CDS | 45.0% | |
| CTTCATCTCCAACCTTCATG+AGG | - | chr5_1:66261260-66261279 | Msa0745150:CDS | 45.0% | |
| GGTAAAGACCTCATGAAGGT+TGG | + | chr5_1:66261271-66261290 | None:intergenic | 45.0% | |
| AATGGATCTTGCTACGCTCT+TGG | - | chr5_1:66261518-66261537 | Msa0745150:CDS | 45.0% | |
| ATGGATCTTGCTACGCTCTT+GGG | - | chr5_1:66261519-66261538 | Msa0745150:CDS | 45.0% | |
| CTTTGCCATACTCTTCGTGA+AGG | + | chr5_1:66262057-66262076 | None:intergenic | 45.0% | |
| !! | TTATATATCTAAAAATAAAA+TGG | - | chr5_1:66260287-66260306 | Msa0745150:CDS | 5.0% |
| GAGCCGGATCGAATCACAAT+AGG | + | chr5_1:66254234-66254253 | None:intergenic | 50.0% | |
| CCTCGTAGTAACCTCGCTTT+CGG | - | chr5_1:66254496-66254515 | Msa0745150:CDS | 50.0% | |
| GATCGTTGAATCCGAAAGCG+AGG | + | chr5_1:66254510-66254529 | None:intergenic | 50.0% | |
| ! | GGTGATGTCGGTTATTCGGA+AGG | - | chr5_1:66254961-66254980 | Msa0745150:CDS | 50.0% |
| CGATGAAATGACTCAGCAGC+AGG | - | chr5_1:66255002-66255021 | Msa0745150:CDS | 50.0% | |
| CACTAATGCATGTCTGCACC+AGG | - | chr5_1:66255268-66255287 | Msa0745150:CDS | 50.0% | |
| CTTGCAGTAGTCAAGATGCC+TGG | - | chr5_1:66255860-66255879 | Msa0745150:CDS | 50.0% | |
| ! | GCAGGCGTCGTAAGTGATAA+GGG | + | chr5_1:66255890-66255909 | None:intergenic | 50.0% |
| ! | TGCAGGCGTCGTAAGTGATA+AGG | + | chr5_1:66255891-66255910 | None:intergenic | 50.0% |
| TTGCAGGCATAGACGAATGC+AGG | + | chr5_1:66255908-66255927 | None:intergenic | 50.0% | |
| TTCGTCTATGCCTGCAAGCA+TGG | - | chr5_1:66255911-66255930 | Msa0745150:intron | 50.0% | |
| TCGTCTATGCCTGCAAGCAT+GGG | - | chr5_1:66255912-66255931 | Msa0745150:intron | 50.0% | |
| ! | TGGCTCTTCGAAGTGCCTTT+GGG | - | chr5_1:66255980-66255999 | Msa0745150:intron | 50.0% |
| ! | TCTTCGAAGTGCCTTTGGGT+AGG | - | chr5_1:66255984-66256003 | Msa0745150:intron | 50.0% |
| GAGTTCTTGTTGCAACCTCG+AGG | - | chr5_1:66256094-66256113 | Msa0745150:CDS | 50.0% | |
| AAGTTGGGATGGAGTACGTC+AGG | - | chr5_1:66256489-66256508 | Msa0745150:intron | 50.0% | |
| ! | TCGGCAATTTTTCTTCGCCC+TGG | - | chr5_1:66256794-66256813 | Msa0745150:CDS | 50.0% |
| CAGTTTCCCATTGAGCCAAG+GGG | - | chr5_1:66257254-66257273 | Msa0745150:CDS | 50.0% | |
| AAGCATCCCCTTGGCTCAAT+GGG | + | chr5_1:66257263-66257282 | None:intergenic | 50.0% | |
| ! | AAAGCATCCCCTTGGCTCAA+TGG | + | chr5_1:66257264-66257283 | None:intergenic | 50.0% |
| GAGCCAAGGGGATGCTTTAT+TGG | - | chr5_1:66257266-66257285 | Msa0745150:CDS | 50.0% | |
| TTGGAATCCTGGCTTCACCA+TGG | + | chr5_1:66257320-66257339 | None:intergenic | 50.0% | |
| TGCAGAGTGACAGAATTCGG+TGG | - | chr5_1:66257460-66257479 | Msa0745150:intron | 50.0% | |
| ! | AGAGTGACAGAATTCGGTGG+TGG | - | chr5_1:66257463-66257482 | Msa0745150:intron | 50.0% |
| ! | GAGTGACAGAATTCGGTGGT+GGG | - | chr5_1:66257464-66257483 | Msa0745150:intron | 50.0% |
| GGCAAGATCCAGCTCTCAAT+TGG | - | chr5_1:66257516-66257535 | Msa0745150:intron | 50.0% | |
| TCCAGTTCGATCCGATAGAG+AGG | - | chr5_1:66257869-66257888 | Msa0745150:CDS | 50.0% | |
| TCCTCTCTATCGGATCGAAC+TGG | + | chr5_1:66257873-66257892 | None:intergenic | 50.0% | |
| GTTTCCACTCCCGAAACTTG+CGG | - | chr5_1:66258095-66258114 | Msa0745150:CDS | 50.0% | |
| TCCCGAAACTTGCGGCTAAA+TGG | - | chr5_1:66258103-66258122 | Msa0745150:CDS | 50.0% | |
| CCCATTTAGCCGCAAGTTTC+GGG | + | chr5_1:66258107-66258126 | None:intergenic | 50.0% | |
| CCCGAAACTTGCGGCTAAAT+GGG | - | chr5_1:66258104-66258123 | Msa0745150:CDS | 50.0% | |
| GCCCATTTAGCCGCAAGTTT+CGG | + | chr5_1:66258108-66258127 | None:intergenic | 50.0% | |
| GGCTAAATGGGCCATGGAAA+TGG | - | chr5_1:66258116-66258135 | Msa0745150:CDS | 50.0% | |
| GAAGACCACAAGGTAAGCGA+AGG | + | chr5_1:66258293-66258312 | None:intergenic | 50.0% | |
| GAGAAGTCTGACTAGGCAAG+AGG | - | chr5_1:66258415-66258434 | Msa0745150:intron | 50.0% | |
| GAGAGACATCTCTCAGCCAA+TGG | + | chr5_1:66258702-66258721 | None:intergenic | 50.0% | |
| CTTCAGGTATGCCGTTGAGA+TGG | + | chr5_1:66259498-66259517 | None:intergenic | 50.0% | |
| !! | TTGATGGTGGCCATGCAGAA+AGG | + | chr5_1:66259932-66259951 | None:intergenic | 50.0% |
| ACATGTGGCTGTGGACTTGA+TGG | + | chr5_1:66259948-66259967 | None:intergenic | 50.0% | |
| AGCTCATTCACATGTGGCTG+TGG | + | chr5_1:66259957-66259976 | None:intergenic | 50.0% | |
| TTGAACGCGATCTCGAGTCA+TGG | - | chr5_1:66259997-66260016 | Msa0745150:intron | 50.0% | |
| TGTTTCAGTTCTGTGCAGGG+AGG | - | chr5_1:66260128-66260147 | Msa0745150:CDS | 50.0% | |
| TTTGTGGTTACTCCAGCCCA+TGG | + | chr5_1:66260344-66260363 | None:intergenic | 50.0% | |
| GCATCCTGTCTACCTGTCAT+GGG | - | chr5_1:66260933-66260952 | Msa0745150:intron | 50.0% | |
| ATCTCCCATGACAGGTAGAC+AGG | + | chr5_1:66260940-66260959 | None:intergenic | 50.0% | |
| GAGGAAACGAGAGAAGCAGA+TGG | - | chr5_1:66261186-66261205 | Msa0745150:CDS | 50.0% | |
| GGCTGGTAAAGACCTCATGA+AGG | + | chr5_1:66261275-66261294 | None:intergenic | 50.0% | |
| ! | TCGTGGATTGTGGGACAGAA+TGG | - | chr5_1:66261314-66261333 | Msa0745150:CDS | 50.0% |
| ! | CGTGGATTGTGGGACAGAAT+GGG | - | chr5_1:66261315-66261334 | Msa0745150:CDS | 50.0% |
| ATTGTGGGACAGAATGGGAC+AGG | - | chr5_1:66261320-66261339 | Msa0745150:CDS | 50.0% | |
| TGGATCTTGCTACGCTCTTG+GGG | - | chr5_1:66261520-66261539 | Msa0745150:CDS | 50.0% | |
| GGGAAAATTAGGGCCGCAAA+AGG | - | chr5_1:66261969-66261988 | Msa0745150:intron | 50.0% | |
| ! | GCCATGGGAATAGCCTTTTG+CGG | + | chr5_1:66261985-66262004 | None:intergenic | 50.0% |
| ! | TTGTGATTCGATCCGGCTCG+AGG | - | chr5_1:66254235-66254254 | Msa0745150:three_prime_UTR | 55.0% |
| ! | TGTGATTCGATCCGGCTCGA+GGG | - | chr5_1:66254236-66254255 | Msa0745150:three_prime_UTR | 55.0% |
| CAGAGACTAATCCCTCGAGC+CGG | + | chr5_1:66254250-66254269 | None:intergenic | 55.0% | |
| !! | GGCTCGAGGGATTAGTCTCT+GGG | - | chr5_1:66254249-66254268 | Msa0745150:three_prime_UTR | 55.0% |
| ! | CTCAGTTAGAGGAGAGCGTG+TGG | + | chr5_1:66254365-66254384 | None:intergenic | 55.0% |
| CCGAAAGCGAGGTTACTACG+AGG | + | chr5_1:66254499-66254518 | None:intergenic | 55.0% | |
| GTACTGCTGGAAGAGGGGTT+CGG | - | chr5_1:66254860-66254879 | Msa0745150:intron | 55.0% | |
| CGGTTATTCGGAAGGATCCG+TGG | - | chr5_1:66254969-66254988 | Msa0745150:CDS | 55.0% | |
| TGACTCAGCAGCAGGATAGG+AGG | - | chr5_1:66255010-66255029 | Msa0745150:CDS | 55.0% | |
| AGCAGCAGGATAGGAGGTCT+TGG | - | chr5_1:66255016-66255035 | Msa0745150:CDS | 55.0% | |
| ATGGGCAAGAGGCTGTACTG+AGG | - | chr5_1:66255930-66255949 | Msa0745150:intron | 55.0% | |
| ! | CTGGCTCTTCGAAGTGCCTT+TGG | - | chr5_1:66255979-66255998 | Msa0745150:intron | 55.0% |
| ! | GCAGCAGAGAGAGCACATAC+AGG | + | chr5_1:66257363-66257382 | None:intergenic | 55.0% |
| ! | ACTGCAGAGTGCTCCTGTTG+TGG | - | chr5_1:66258024-66258043 | Msa0745150:intron | 55.0% |
| TTAGCCGCAAGTTTCGGGAG+TGG | + | chr5_1:66258102-66258121 | None:intergenic | 55.0% | |
| ACTTGCGGCTAAATGGGCCA+TGG | - | chr5_1:66258110-66258129 | Msa0745150:CDS | 55.0% | |
| AACTCCAACCAAGGACTGCC+TGG | - | chr5_1:66258346-66258365 | Msa0745150:intron | 55.0% | |
| AGCAGGATGTAAAGCTGGCG+CGG | + | chr5_1:66259098-66259117 | None:intergenic | 55.0% | |
| TGTGGCTGTGGACTTGATGG+TGG | + | chr5_1:66259945-66259964 | None:intergenic | 55.0% | |
| ATGACACAGGTTCCATGGGC+TGG | - | chr5_1:66260329-66260348 | Msa0745150:CDS | 55.0% | |
| GGCATCCTGTCTACCTGTCA+TGG | - | chr5_1:66260932-66260951 | Msa0745150:intron | 55.0% | |
| GCTTCAATCACTGAGCGAGG+AGG | + | chr5_1:66261753-66261772 | None:intergenic | 55.0% | |
| CGAGCTTCAATCACTGAGCG+AGG | + | chr5_1:66261756-66261775 | None:intergenic | 55.0% | |
| GCCGCAAAAGGCTATTCCCA+TGG | - | chr5_1:66261981-66262000 | Msa0745150:intron | 55.0% | |
| !! | CGGCTCGAGGGATTAGTCTC+TGG | - | chr5_1:66254248-66254267 | Msa0745150:three_prime_UTR | 60.0% |
| TCATCGGTCTCAGCAGCAGC+AGG | + | chr5_1:66254577-66254596 | None:intergenic | 60.0% | |
| TGCCTGCAAGCATGGGCAAG+AGG | - | chr5_1:66255919-66255938 | Msa0745150:intron | 60.0% | |
| AGCCTCTTGCCCATGCTTGC+AGG | + | chr5_1:66255924-66255943 | None:intergenic | 60.0% | |
| AAGAGGCTGTACTGAGGCCC+CGG | - | chr5_1:66255936-66255955 | Msa0745150:intron | 60.0% | |
| AGGCAGTCCATGGTGAAGCC+AGG | - | chr5_1:66257310-66257329 | Msa0745150:intron | 60.0% | |
| AGCTCCAGGCAGTCCTTGGT+TGG | + | chr5_1:66258353-66258372 | None:intergenic | 60.0% | |
| CACAAGCTCCAGGCAGTCCT+TGG | + | chr5_1:66258357-66258376 | None:intergenic | 60.0% | |
| GGTCTCAGCAGCAGCAGGAC+AGG | + | chr5_1:66254572-66254591 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 66254049 | 66262208 | 66254049 | ID=Msa0745150;Name=Msa0745150 |
| chr5_1 | mRNA | 66254049 | 66262208 | 66254049 | ID=Msa0745150-mRNA-1;Parent=Msa0745150;Name=Msa0745150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=62|1|0.95|1|1|1|21|372|1194 |
| chr5_1 | exon | 66254049 | 66254579 | 66254049 | ID=Msa0745150-mRNA-1:exon:19743;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66254716 | 66254787 | 66254716 | ID=Msa0745150-mRNA-1:exon:19742;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66254916 | 66255110 | 66254916 | ID=Msa0745150-mRNA-1:exon:19741;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66255199 | 66255402 | 66255199 | ID=Msa0745150-mRNA-1:exon:19740;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66255500 | 66255658 | 66255500 | ID=Msa0745150-mRNA-1:exon:19739;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66255782 | 66255919 | 66255782 | ID=Msa0745150-mRNA-1:exon:19738;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66256016 | 66256121 | 66256016 | ID=Msa0745150-mRNA-1:exon:19737;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66256230 | 66256397 | 66256230 | ID=Msa0745150-mRNA-1:exon:19736;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66256645 | 66256853 | 66256645 | ID=Msa0745150-mRNA-1:exon:19735;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66257068 | 66257292 | 66257068 | ID=Msa0745150-mRNA-1:exon:19734;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66257821 | 66257938 | 66257821 | ID=Msa0745150-mRNA-1:exon:19733;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66258063 | 66258226 | 66258063 | ID=Msa0745150-mRNA-1:exon:19732;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66258682 | 66258792 | 66258682 | ID=Msa0745150-mRNA-1:exon:19731;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66258895 | 66259000 | 66258895 | ID=Msa0745150-mRNA-1:exon:19730;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66259420 | 66259525 | 66259420 | ID=Msa0745150-mRNA-1:exon:19729;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66259676 | 66259840 | 66259676 | ID=Msa0745150-mRNA-1:exon:19728;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66260052 | 66260170 | 66260052 | ID=Msa0745150-mRNA-1:exon:19727;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66260256 | 66260399 | 66260256 | ID=Msa0745150-mRNA-1:exon:19726;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66260797 | 66260868 | 66260797 | ID=Msa0745150-mRNA-1:exon:19725;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66261133 | 66261929 | 66261133 | ID=Msa0745150-mRNA-1:exon:19724;Parent=Msa0745150-mRNA-1 |
| chr5_1 | exon | 66262099 | 66262208 | 66262099 | ID=Msa0745150-mRNA-1:exon:19723;Parent=Msa0745150-mRNA-1 |
| chr5_1 | five_prime_UTR | 66262147 | 66262208 | 66262147 | ID=Msa0745150-mRNA-1:five_prime_utr;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66262099 | 66262146 | 66262099 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66261133 | 66261929 | 66261133 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66260797 | 66260868 | 66260797 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66260256 | 66260399 | 66260256 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66260052 | 66260170 | 66260052 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66259676 | 66259840 | 66259676 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66259420 | 66259525 | 66259420 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66258895 | 66259000 | 66258895 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66258682 | 66258792 | 66258682 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66258063 | 66258226 | 66258063 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66257821 | 66257938 | 66257821 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66257068 | 66257292 | 66257068 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66256645 | 66256853 | 66256645 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66256230 | 66256397 | 66256230 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66256016 | 66256121 | 66256016 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66255782 | 66255919 | 66255782 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66255500 | 66255658 | 66255500 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66255199 | 66255402 | 66255199 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66254916 | 66255110 | 66254916 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66254716 | 66254787 | 66254716 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | CDS | 66254421 | 66254579 | 66254421 | ID=Msa0745150-mRNA-1:cds;Parent=Msa0745150-mRNA-1 |
| chr5_1 | three_prime_UTR | 66254049 | 66254420 | 66254049 | ID=Msa0745150-mRNA-1:three_prime_utr;Parent=Msa0745150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
