AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0865440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865440 MtrunA17_Chr5g0448351 94.689 1205 48 7 1 1195 1 1199 0.0 2330
Msa0865440 MtrunA17_Chr5g0427251 41.309 1283 610 28 1 1193 1 1230 0.0 908
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865440 AT5G48310.2 55.190 1185 453 18 33 1195 1 1129 0.0 1237
Msa0865440 AT5G48310.1 54.871 1201 459 18 33 1195 1 1156 0.0 1233
Msa0865440 AT4G24610.1 45.047 959 462 13 286 1193 206 1150 0.0 840
Msa0865440 AT4G24610.3 45.047 959 462 13 286 1193 210 1154 0.0 840
Msa0865440 AT4G24610.4 45.000 960 462 14 286 1193 206 1151 0.0 835
Msa0865440 AT4G24610.2 45.000 960 462 14 286 1193 210 1155 0.0 835
Msa0865440 AT5G65440.6 39.098 931 491 15 309 1185 175 1083 0.0 707
Msa0865440 AT5G65440.4 39.098 931 491 15 309 1185 175 1083 0.0 707
Msa0865440 AT5G65440.7 39.098 931 491 15 309 1185 175 1083 0.0 707
Msa0865440 AT5G65440.1 39.098 931 491 15 309 1185 134 1042 0.0 706
Msa0865440 AT5G65440.8 39.098 931 491 15 309 1185 134 1042 0.0 706
Msa0865440 AT5G65440.9 39.098 931 491 15 309 1185 134 1042 0.0 706
Msa0865440 AT5G65440.3 37.720 965 491 16 309 1185 175 1117 0.0 689
Msa0865440 AT5G65440.2 38.106 866 460 15 309 1120 134 977 0.0 634
Msa0865440 AT5G65440.5 38.106 866 460 15 309 1120 175 1018 0.0 634

Find 270 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTTAGCCGCAAGTTTC+GGG 0.157218 5_4:-66142145 None:intergenic
TCCCGAAACTTGCGGCTAAA+TGG 0.173469 5_4:+66142144 Msa0865440:CDS
GCCTCAATACTCCTTGTATT+TGG 0.182439 5_4:+66144489 Msa0865440:CDS
TCGCTTGTAAAGGGAAAATT+AGG 0.183051 5_4:+66145999 Msa0865440:three_prime_UTR
ACTTATTTGCAAGCAATAAT+AGG 0.201654 5_4:+66145061 Msa0865440:CDS
CTCACTTCTGGCCTTCATTA+GGG 0.203293 5_4:-66142434 None:intergenic
TTTAGGAGTGAGATTATTAT+TGG 0.208620 5_4:-66138460 None:intergenic
TATGATGAGGAACAGTTATT+TGG 0.227662 5_4:+66138687 Msa0865440:CDS
CTTCTAGAATTAACAGTATT+AGG 0.238150 5_4:-66138798 None:intergenic
TCTCACTTCTGGCCTTCATT+AGG 0.239461 5_4:-66142435 None:intergenic
GTAATTGTGAAACAAATTTC+TGG 0.249080 5_4:-66144200 None:intergenic
GGAGGTAAAGATGGAGATTT+AGG 0.251463 5_4:-66138477 None:intergenic
ACACAGCTCTGTGCTATAAA+TGG 0.254036 5_4:-66143930 None:intergenic
GAGCCAAGGGGATGCTTTAT+TGG 0.259764 5_4:+66141307 Msa0865440:CDS
GCCCATTTAGCCGCAAGTTT+CGG 0.273486 5_4:-66142146 None:intergenic
TTATCATTAAGGTAAGAAAT+TGG 0.284007 5_4:-66141377 None:intergenic
CTCACAGAGAAGTATACTTT+TGG 0.286313 5_4:+66142999 Msa0865440:intron
GAGGAACAGTTATTTGGATT+TGG 0.296334 5_4:+66138693 Msa0865440:CDS
TGATAGGGTACCACTCTTAT+TGG 0.298776 5_4:-66146138 None:intergenic
TTTGAATGATTCTGTTGATT+TGG 0.300090 5_4:+66138932 Msa0865440:CDS
AGCCTCTTGCCCATGCTTGC+AGG 0.302906 5_4:-66139953 None:intergenic
ACAGGTTTAACCGATCATTT+TGG 0.303277 5_4:+66143096 Msa0865440:CDS
CACATACAGGATTATCATTA+AGG 0.303700 5_4:-66141388 None:intergenic
CTGGCTCTTCGAAGTGCCTT+TGG 0.307080 5_4:+66140011 Msa0865440:CDS
GACAGACTGCAGCAAGAAAA+AGG 0.309951 5_4:+66143440 Msa0865440:intron
ATGGATCTTGCTACGCTCTT+GGG 0.310033 5_4:+66145560 Msa0865440:CDS
CATTCCTTTACAAAAGTGAT+AGG 0.315414 5_4:-66146154 None:intergenic
ACTTGCAAGTGAAGTCTCTT+TGG 0.319778 5_4:-66144724 None:intergenic
GCTGACCATGGATTGTATTA+TGG 0.323976 5_4:-66143618 None:intergenic
GACATATTGCTATGAAGATT+TGG 0.329067 5_4:-66145334 None:intergenic
AGATTTACTGATGGAGAGTT+AGG 0.331074 5_4:+66138819 Msa0865440:CDS
TTCTATAAGAAATGAAATTC+AGG 0.331997 5_4:+66143576 Msa0865440:CDS
ACTCCATGTGGAAGTGAAAT+TGG 0.340049 5_4:+66138870 Msa0865440:CDS
ATAGCACAGAGCTGTGTAAA+AGG 0.344097 5_4:+66143936 Msa0865440:CDS
CACAAGCTCCAGGCAGTCCT+TGG 0.345260 5_4:-66142395 None:intergenic
GACAGGATGCCCATGAATTT+AGG 0.345736 5_4:-66144961 None:intergenic
CTTATTTGCAAGCAATAATA+GGG 0.349385 5_4:+66145062 Msa0865440:CDS
TCATCATAGCATTGTGCAAT+TGG 0.349403 5_4:-66138672 None:intergenic
TCATGATAATCTCCACTTCC+AGG 0.356135 5_4:-66140853 None:intergenic
TTCTTGTAGATATCTATTAC+AGG 0.357704 5_4:+66142351 Msa0865440:intron
AATTTCCTTCACGAAGAGTA+TGG 0.362980 5_4:+66146090 Msa0865440:three_prime_UTR
GCTCCTCCTATATTTGTTGA+TGG 0.363206 5_4:+66138966 Msa0865440:CDS
AGTCAGACTTCTCTCACTTC+TGG 0.363501 5_4:-66142446 None:intergenic
CACTCTTATTGGTAAGAGAT+TGG 0.363953 5_4:-66146127 None:intergenic
ATCTCGAGTCATGGAATATA+AGG 0.364375 5_4:+66144047 Msa0865440:CDS
GGACTGCCTTCTTAGAATCT+TGG 0.368271 5_4:-66141337 None:intergenic
TACCTTTCAGCAACAGTATT+AGG 0.369090 5_4:-66139137 None:intergenic
CAGAGATAACTTACTTGGTT+AGG 0.370777 5_4:-66144790 None:intergenic
TTCACAATTACATCATGGTT+TGG 0.372780 5_4:+66144212 Msa0865440:CDS
CTTCTGTTGCACTCTTGAGT+TGG 0.373272 5_4:-66140792 None:intergenic
ATGGGAGATAAGAAGTTGTT+TGG 0.376540 5_4:+66144992 Msa0865440:CDS
TATTGATTACCACTTCATAC+TGG 0.382046 5_4:-66144462 None:intergenic
AATGGATCTTGCTACGCTCT+TGG 0.383403 5_4:+66145559 Msa0865440:CDS
GATGCATTTGCTGACTACTA+TGG 0.386031 5_4:+66142186 Msa0865440:CDS
GGAGGAAAGAAAATAGAATA+TGG 0.387361 5_4:+66145533 Msa0865440:CDS
TGCACTCCAATGGATCAATA+AGG 0.392105 5_4:+66138165 Msa0865440:CDS
TTCATGTTTCAGTTCTGTGC+AGG 0.393565 5_4:+66144165 Msa0865440:intron
TGGCTCTTCGAAGTGCCTTT+GGG 0.394270 5_4:+66140012 Msa0865440:CDS
CAGTTATTTGGATTTGGTAA+TGG 0.403146 5_4:+66138699 Msa0865440:CDS
TAATAGAATCTCTTTCTTGT+TGG 0.405017 5_4:-66146051 None:intergenic
ACTTGCAATATCTCAATAAC+AGG 0.409440 5_4:+66139471 Msa0865440:CDS
CCTCGTAGTAACCTCGCTTT+CGG 0.410441 5_4:+66138525 Msa0865440:CDS
AAAGCATCCCCTTGGCTCAA+TGG 0.411838 5_4:-66141302 None:intergenic
CCACAAATTGTTCAGATTCA+AGG 0.412166 5_4:+66145173 Msa0865440:intron
CCCGAAACTTGCGGCTAAAT+GGG 0.412285 5_4:+66142145 Msa0865440:CDS
CCTTCACCATCAACAAATAT+AGG 0.414292 5_4:-66138972 None:intergenic
AAGCATCCCCTTGGCTCAAT+GGG 0.416333 5_4:-66141301 None:intergenic
TTCGTCTATGCCTGCAAGCA+TGG 0.422145 5_4:+66139943 Msa0865440:CDS
CTTGATGAAAACTCGCCAAC+AGG 0.425161 5_4:+66143078 Msa0865440:CDS
AGTGAGATTATTATTGGAAA+GGG 0.429277 5_4:-66138454 None:intergenic
TCTCAGATGCAAAGATTAAG+AGG 0.429798 5_4:+66145740 Msa0865440:CDS
TGGTGACAACAATCATATAA+AGG 0.432851 5_4:+66141595 Msa0865440:CDS
GGCAAGATCCAGCTCTCAAT+TGG 0.438777 5_4:+66141557 Msa0865440:CDS
TGATCTTTGTAAAGCAGAAA+AGG 0.441629 5_4:+66144261 Msa0865440:CDS
GACATCAAGTATCCTCTTGA+TGG 0.441717 5_4:-66144915 None:intergenic
ATATGCAGAGTGACAGAATT+CGG 0.441939 5_4:+66141498 Msa0865440:intron
TGCAGGCGTCGTAAGTGATA+AGG 0.442938 5_4:-66139920 None:intergenic
AAGGTAAGAAATTGGAATCC+TGG 0.447464 5_4:-66141369 None:intergenic
ACATGTGGCTGTGGACTTGA+TGG 0.447824 5_4:-66143986 None:intergenic
GGCATCCTGTCTACCTGTCA+TGG 0.449910 5_4:+66144973 Msa0865440:CDS
CGAAGAAGTAGAAGAATCAA+TGG 0.449917 5_4:-66138097 None:intergenic
GATCAATGTATAAGCAAGTT+GGG 0.451761 5_4:+66140515 Msa0865440:CDS
AAAGTGTTCTCGCTTGTAAA+GGG 0.452871 5_4:+66145990 Msa0865440:three_prime_UTR
GGCTAAATGGGCCATGGAAA+TGG 0.453209 5_4:+66142157 Msa0865440:CDS
AACAAATGACACAGGTTCCA+TGG 0.454278 5_4:+66144365 Msa0865440:intron
TAGGCTTGAGTTTCCACAAC+AGG 0.455044 5_4:-66142078 None:intergenic
ATGAAGTGGTAATCAATAGA+TGG 0.456403 5_4:+66144467 Msa0865440:CDS
TTTCTTGTTGGCAAATGCCA+TGG 0.462228 5_4:-66146039 None:intergenic
TGAAGGTGATGTCAGTTATT+CGG 0.463377 5_4:+66138989 Msa0865440:CDS
TATATGTAGAAATAAGTAGA+TGG 0.465515 5_4:-66145854 None:intergenic
GGGAAAATTAGGGCCGCAAA+AGG 0.466296 5_4:+66146010 Msa0865440:three_prime_UTR
ATCTCCCATGACAGGTAGAC+AGG 0.466496 5_4:-66144978 None:intergenic
AGCAGCAGGATAGGAGGTCT+TGG 0.466639 5_4:+66139048 Msa0865440:CDS
AACTCCAACCAAGGACTGCC+TGG 0.468493 5_4:+66142387 Msa0865440:CDS
GTACTGCTGGAAGAGGGGTT+CGG 0.469467 5_4:+66138892 Msa0865440:CDS
GCAGGCGTCGTAAGTGATAA+GGG 0.470911 5_4:-66139919 None:intergenic
TTCCTTGTACTACCTTCAGT+TGG 0.472513 5_4:-66140165 None:intergenic
TTGTTTGGAGAGCAAATGAA+TGG 0.472679 5_4:+66145007 Msa0865440:CDS
TGGTTACCTTATTGATCCAT+TGG 0.472843 5_4:-66138171 None:intergenic
TAGCAATATGTCGTGGATTG+TGG 0.475941 5_4:+66145345 Msa0865440:CDS
AGCAATATGTCGTGGATTGT+GGG 0.476986 5_4:+66145346 Msa0865440:CDS
CTCAAGACAAAGAAGGTTGT+GGG 0.479223 5_4:+66140207 Msa0865440:CDS
GTCCATTTGGTAACTTTCTG+AGG 0.479994 5_4:-66143506 None:intergenic
AAAAGTGTTCTCGCTTGTAA+AGG 0.484004 5_4:+66145989 Msa0865440:three_prime_UTR
AAGTTGGGATGGAGTACGTC+AGG 0.485061 5_4:+66140530 Msa0865440:CDS
TTCTTGTTGGCAAATGCCAT+GGG 0.485344 5_4:-66146038 None:intergenic
GTTTCATCCCTTGTGAAAAG+TGG 0.486018 5_4:+66140556 Msa0865440:CDS
TCCAAATACAAGGAGTATTG+AGG 0.487212 5_4:-66144490 None:intergenic
CCGATTCATATGCTAAATTG+AGG 0.487243 5_4:+66142214 Msa0865440:CDS
ACCCTCCAACAATATATCAT+AGG 0.489559 5_4:-66142097 None:intergenic
AGATGGTAATGCTGTCCATT+TGG 0.491575 5_4:-66143519 None:intergenic
GTTTCTAAAAGATGAGTGTC+TGG 0.492440 5_4:+66139992 Msa0865440:CDS
AGCTCATTCACATGTGGCTG+TGG 0.493960 5_4:-66143995 None:intergenic
TGGAAGACATCCTAAATTCA+TGG 0.495445 5_4:+66144951 Msa0865440:CDS
TCATGTTTCAGTTCTGTGCA+GGG 0.496350 5_4:+66144166 Msa0865440:intron
AAATGACTCAGCAGCAGGAT+AGG 0.498541 5_4:+66139039 Msa0865440:CDS
CCTCAATTTAGCATATGAAT+CGG 0.500851 5_4:-66142214 None:intergenic
AAGAGGCTGTACTGAGGCCC+CGG 0.501987 5_4:+66139968 Msa0865440:CDS
GGAAGTGAAATTGGTACTGC+TGG 0.503174 5_4:+66138879 Msa0865440:CDS
AGGCAGTCCATGGTGAAGCC+AGG 0.503776 5_4:+66141351 Msa0865440:CDS
GTTGCGAAAAGAGGTGATCT+AGG 0.504571 5_4:-66138429 None:intergenic
ACAACCTTCTTTGTCTTGAG+AGG 0.505297 5_4:-66140204 None:intergenic
TGCCTCAGAAAGTTACCAAA+TGG 0.505968 5_4:+66143504 Msa0865440:CDS
TTTGGTATGCTATCTTTCAA+AGG 0.506151 5_4:-66144706 None:intergenic
TTTGTTTCACAATTACATCA+TGG 0.508017 5_4:+66144207 Msa0865440:CDS
ATGACACAGGTTCCATGGGC+TGG 0.508635 5_4:+66144370 Msa0865440:intron
TCGTCTATGCCTGCAAGCAT+GGG 0.511245 5_4:+66139944 Msa0865440:CDS
TCAAGCCTATGATATATTGT+TGG 0.513388 5_4:+66142092 Msa0865440:CDS
TGGTGAAGTGGAATGATTTG+TGG 0.516170 5_4:-66144398 None:intergenic
TATTGCTATGAAGATTTGGC+TGG 0.516781 5_4:-66145330 None:intergenic
TCTCAAGACAAAGAAGGTTG+TGG 0.517514 5_4:+66140206 Msa0865440:CDS
TCATCGGTCTCAGCTGCAGC+AGG 0.518549 5_4:-66138606 None:intergenic
GAAATTGGTACTGCTGGAAG+AGG 0.520455 5_4:+66138885 Msa0865440:CDS
CCCTTCCTCAAAATTCCACT+AGG 0.520908 5_4:-66138744 None:intergenic
TCACTCTCAGTGACAGAAGA+AGG 0.521728 5_4:+66140601 Msa0865440:CDS
GAGTGAGATTATTATTGGAA+AGG 0.521775 5_4:-66138455 None:intergenic
CGCTTGTAAAGGGAAAATTA+GGG 0.522265 5_4:+66146000 Msa0865440:three_prime_UTR
AAATGAATCAGAGTCATGTT+CGG 0.522569 5_4:+66140816 Msa0865440:CDS
TCACTTCTGGCCTTCATTAG+GGG 0.524637 5_4:-66142433 None:intergenic
GAAAGGGTTGTTGCGAAAAG+AGG 0.525261 5_4:-66138438 None:intergenic
TTGTACTTCCAATTGAGAGC+TGG 0.525299 5_4:-66141565 None:intergenic
AGATATTGCAAGTGTGGAGG+AGG 0.526974 5_4:-66139461 None:intergenic
GGATCAATGTATAAGCAAGT+TGG 0.527369 5_4:+66140514 Msa0865440:CDS
TCGTGGATTGTGGGACAGAA+TGG 0.528693 5_4:+66145355 Msa0865440:CDS
AGCCTATGATATATTGTTGG+AGG 0.530615 5_4:+66142095 Msa0865440:CDS
TTCAGTTTCCCATTGAGCCA+AGG 0.531016 5_4:+66141293 Msa0865440:intron
CTACTGTAGACTTGTAGAGC+AGG 0.532410 5_4:-66143153 None:intergenic
AGCTCCAGGCAGTCCTTGGT+TGG 0.532583 5_4:-66142391 None:intergenic
AACAACCATAATACAATCCA+TGG 0.534702 5_4:+66143613 Msa0865440:CDS
TTAGCCGCAAGTTTCGGGAG+TGG 0.537146 5_4:-66142140 None:intergenic
GTAAGTGATAAGGGTTTGCC+AGG 0.537868 5_4:-66139910 None:intergenic
CTTGCTTATACATTGATCCT+CGG 0.538232 5_4:-66140510 None:intergenic
TCTTTCTATGCCCTGTGTAG+AGG 0.538250 5_4:-66139432 None:intergenic
GGTCTCAGCTGCAGCAGGAC+AGG 0.539299 5_4:-66138601 None:intergenic
TACACAGGGCATAGAAAGAC+AGG 0.540262 5_4:+66139436 Msa0865440:CDS
AGTTGGATCAAACAATGCAT+TGG 0.548129 5_4:-66140775 None:intergenic
TCAGTTTCCCATTGAGCCAA+GGG 0.548372 5_4:+66141294 Msa0865440:intron
GGTAAAGACCTCATGAAGGT+TGG 0.548390 5_4:-66145309 None:intergenic
TGTAGAGCAGGATGTAAAGC+TGG 0.549874 5_4:-66143141 None:intergenic
AAAAGAGGTGATCTAGGAAG+AGG 0.550795 5_4:-66138423 None:intergenic
TGTCTTCCACTCTACAATGT+AGG 0.551082 5_4:-66144937 None:intergenic
TTGCAGGCATAGACGAATGC+AGG 0.551829 5_4:-66139937 None:intergenic
TTTCTCAGCAAATGGTGAAG+TGG 0.552861 5_4:-66144410 None:intergenic
AAGTGGTATACAGTCTATGA+AGG 0.554143 5_4:+66140573 Msa0865440:CDS
GAGACTGATGAATTTGTGTC+GGG 0.554425 5_4:+66143481 Msa0865440:CDS
AGAAGTCCAAGATTCTAAGA+AGG 0.555902 5_4:+66141331 Msa0865440:CDS
TTGAGATATTGCAAGTGTGG+AGG 0.557086 5_4:-66139464 None:intergenic
CCTATATTTGTTGATGGTGA+AGG 0.557712 5_4:+66138972 Msa0865440:CDS
ATTCCTTTACAAAAGTGATA+GGG 0.558365 5_4:-66146153 None:intergenic
AAATGATCGGTTAAACCTGT+TGG 0.559634 5_4:-66143093 None:intergenic
GTAACTCTTTCACAAGCTCC+AGG 0.560180 5_4:-66142405 None:intergenic
GGCTGTGGCAAATATTGAAA+GGG 0.560699 5_4:+66144639 Msa0865440:intron
TGGATCTTGCTACGCTCTTG+GGG 0.560823 5_4:+66145561 Msa0865440:CDS
GTTACTTGATCCCCTAATGA+AGG 0.563068 5_4:+66142423 Msa0865440:CDS
CGATGAAATGACTCAGCAGC+AGG 0.563082 5_4:+66139034 Msa0865440:CDS
CTTCAGGTATGCCGTTGAGA+TGG 0.565249 5_4:-66143536 None:intergenic
GAGAAGCAGAAGTTCGTGAA+AGG 0.567985 5_4:+66145249 Msa0865440:CDS
AAATTGGTACTGCTGGAAGA+GGG 0.568372 5_4:+66138886 Msa0865440:CDS
AATGTATAAGCAAGTTGGGA+TGG 0.569458 5_4:+66140519 Msa0865440:CDS
AATTCTAGAAGATTTACTGA+TGG 0.569546 5_4:+66138810 Msa0865440:CDS
TGAGAACTTTCCTTTCTGCA+TGG 0.569606 5_4:+66143960 Msa0865440:CDS
AGGCTGTGGCAAATATTGAA+AGG 0.569983 5_4:+66144638 Msa0865440:intron
ACAAATGACACAGGTTCCAT+GGG 0.570078 5_4:+66144366 Msa0865440:intron
CTTGCAGTAGTCAAGATGCC+TGG 0.570788 5_4:+66139892 Msa0865440:CDS
AGAGTGACAGAATTCGGTGG+TGG 0.570925 5_4:+66141504 Msa0865440:intron
AACTTCTTATCTCCCATGAC+AGG 0.571486 5_4:-66144986 None:intergenic
ACTGCAGAGTGCTCCTGTTG+TGG 0.571685 5_4:+66142065 Msa0865440:intron
TGGATGAAACTGCACTCCAA+TGG 0.572829 5_4:+66138155 Msa0865440:CDS
CAGTTATTCGGAAGGATCCG+TGG 0.574006 5_4:+66139001 Msa0865440:CDS
CAACTTAATCCAGTATGAAG+TGG 0.574199 5_4:+66144453 Msa0865440:CDS
GATTCTGTGAATTGTGATGA+TGG 0.575898 5_4:+66139080 Msa0865440:CDS
TCAAGAAACAACCTCTACAC+AGG 0.577200 5_4:+66139421 Msa0865440:CDS
TATTCTACAGAACTATCTGC+AGG 0.579462 5_4:+66143209 Msa0865440:CDS
TTGAACGCGATCTCGAGTCA+TGG 0.579995 5_4:+66144038 Msa0865440:CDS
TGCCTGCAAGCATGGGCAAG+AGG 0.580416 5_4:+66139951 Msa0865440:CDS
TATACAAAGAAGAAAACTGA+AGG 0.581707 5_4:+66140474 Msa0865440:CDS
AAGGTGTAGAAAACACATGA+TGG 0.582937 5_4:+66143459 Msa0865440:CDS
ACAAATATAGGAGGAGCACT+TGG 0.582954 5_4:-66138960 None:intergenic
GGAAGACATCCTAAATTCAT+GGG 0.584196 5_4:+66144952 Msa0865440:CDS
CGTGGATTGTGGGACAGAAT+GGG 0.584754 5_4:+66145356 Msa0865440:CDS
CTTTGCCATACTCTTCGTGA+AGG 0.587668 5_4:-66146095 None:intergenic
GCATCCTGTCTACCTGTCAT+GGG 0.587857 5_4:+66144974 Msa0865440:CDS
GAAAATAGAATATGGTACAA+TGG 0.588488 5_4:+66145541 Msa0865440:CDS
CATGATGATAATGAATGTGT+TGG 0.588840 5_4:+66141536 Msa0865440:CDS
TGCCTAATACTGTTGCTGAA+AGG 0.589120 5_4:+66139135 Msa0865440:CDS
GAGTGACAGAATTCGGTGGT+GGG 0.589193 5_4:+66141505 Msa0865440:intron
ATTGTGGGACAGAATGGGAC+AGG 0.589891 5_4:+66145361 Msa0865440:CDS
CTCAGTTAGAGGAGAGCGTG+TGG 0.590106 5_4:-66138391 None:intergenic
TTGATGGTGGCCATGCAGAA+AGG 0.591303 5_4:-66143970 None:intergenic
CATGATAATCTCCACTTCCA+GGG 0.592137 5_4:-66140852 None:intergenic
GGTTGTGGGGAAAATAAGAG+TGG 0.592804 5_4:+66140221 Msa0865440:CDS
TGACTCAGCAGCAGGATAGG+AGG 0.593992 5_4:+66139042 Msa0865440:CDS
GCATCTAACAACCATTTCCA+TGG 0.594327 5_4:-66142168 None:intergenic
CTACCAATAAAGCATCCCCT+TGG 0.594424 5_4:-66141310 None:intergenic
GAATGTAGCAACTCCAACCA+AGG 0.598101 5_4:+66142378 Msa0865440:CDS
GCCTATGATATATTGTTGGA+GGG 0.599388 5_4:+66142096 Msa0865440:CDS
GTGGGGAAAATAAGAGTGGA+AGG 0.600347 5_4:+66140225 Msa0865440:CDS
GATTCTAAGAAGGCAGTCCA+TGG 0.600429 5_4:+66141341 Msa0865440:CDS
ACTTGCGGCTAAATGGGCCA+TGG 0.602220 5_4:+66142151 Msa0865440:CDS
AGCAGGATGTAAAGCTGGCG+CGG 0.602954 5_4:-66143136 None:intergenic
TTTGTGGTTACTCCAGCCCA+TGG 0.604020 5_4:-66144382 None:intergenic
AGTGCCTCTCAAGACAAAGA+AGG 0.604507 5_4:+66140200 Msa0865440:CDS
AGCCAACTGAAGGTAGTACA+AGG 0.604967 5_4:+66140163 Msa0865440:CDS
TTGGAATCCTGGCTTCACCA+TGG 0.605696 5_4:-66141358 None:intergenic
GCCGCAAAAGGCTATTCCCA+TGG 0.605764 5_4:+66146022 Msa0865440:three_prime_UTR
GGAGACTGATGAATTTGTGT+CGG 0.611838 5_4:+66143480 Msa0865440:CDS
CATTTCTTATAGAAATACAA+AGG 0.614859 5_4:-66143567 None:intergenic
AGATGCTAGACCAAAATGAT+CGG 0.615442 5_4:-66143106 None:intergenic
ATCTTCATAGCAATATGTCG+TGG 0.620851 5_4:+66145338 Msa0865440:CDS
GTTTCCACTCCCGAAACTTG+CGG 0.622116 5_4:+66142136 Msa0865440:CDS
GGCTGGTAAAGACCTCATGA+AGG 0.622315 5_4:-66145313 None:intergenic
GAGGAAACGAGAGAAGCAGA+TGG 0.624705 5_4:+66145227 Msa0865440:CDS
CTTCATCTCCAACCTTCATG+AGG 0.625205 5_4:+66145301 Msa0865440:CDS
GGTGATGTCAGTTATTCGGA+AGG 0.628454 5_4:+66138993 Msa0865440:CDS
GAAGTGAGAGAAGTCTGACT+AGG 0.628633 5_4:+66142449 Msa0865440:CDS
CGAGGTATAAAGCCAACTGA+AGG 0.628927 5_4:+66140153 Msa0865440:CDS
CAAGAAACAACCTCTACACA+GGG 0.629450 5_4:+66139422 Msa0865440:CDS
CCTAAACCCCTAAAACCTAG+TGG 0.630048 5_4:+66138729 Msa0865440:CDS
TCAGTTGGCTTTATACCTCG+AGG 0.631132 5_4:-66140150 None:intergenic
TGTGGCTGTGGACTTGATGG+TGG 0.632595 5_4:-66143983 None:intergenic
TCACCATCAACAAATATAGG+AGG 0.635308 5_4:-66138969 None:intergenic
GAGAAGTCTGACTAGGCAAG+AGG 0.636214 5_4:+66142456 Msa0865440:CDS
GTATCTGGTTCTCAGTAACA+CGG 0.636684 5_4:-66145035 None:intergenic
TTATTGAGATATTGCAAGTG+TGG 0.638514 5_4:-66139467 None:intergenic
ATACAAAGAAGAAAACTGAA+GGG 0.639387 5_4:+66140475 Msa0865440:CDS
CAGTTTCCCATTGAGCCAAG+GGG 0.639439 5_4:+66141295 Msa0865440:intron
CAATCTCTTACCAATAAGAG+TGG 0.645216 5_4:+66146128 Msa0865440:three_prime_UTR
CGAGCTTCAATCACTGAGCG+AGG 0.647220 5_4:-66145794 None:intergenic
TGATGTCCTACATTGTAGAG+TGG 0.648648 5_4:+66144931 Msa0865440:CDS
TGTTTCAGTTCTGTGCAGGG+AGG 0.649450 5_4:+66144169 Msa0865440:intron
GTGAATTGTGATGATGGAGG+AGG 0.651967 5_4:+66139086 Msa0865440:CDS
GAGTTCTTGTTGCAACCTCG+AGG 0.652321 5_4:+66140135 Msa0865440:CDS
TATTCTTGAACACCATCAAG+AGG 0.652692 5_4:+66144903 Msa0865440:CDS
ATTGGAAGTACAATGACAAG+TGG 0.653819 5_4:+66141575 Msa0865440:CDS
CAGAAGAAAATGACTCCATG+TGG 0.655141 5_4:+66138858 Msa0865440:CDS
AATTGCACAATGCTATGATG+AGG 0.655222 5_4:+66138674 Msa0865440:CDS
TTCATCGACTTGATTCGCCA+CGG 0.655644 5_4:-66139018 None:intergenic
AATTGGTACTGCTGGAAGAG+GGG 0.656682 5_4:+66138887 Msa0865440:CDS
ACATGTGAATGAGCTTCTAG+TGG 0.657596 5_4:+66144003 Msa0865440:CDS
TCAAGACAAAGAAGGTTGTG+GGG 0.665374 5_4:+66140208 Msa0865440:CDS
GGACAGCATTACCATCTCAA+CGG 0.666424 5_4:+66143525 Msa0865440:CDS
GTACCAATTTCACTTCCACA+TGG 0.670567 5_4:-66138873 None:intergenic
ACTAGAAGCTCATTCACATG+TGG 0.678399 5_4:-66144001 None:intergenic
TCTGTGAATTGTGATGATGG+AGG 0.678617 5_4:+66139083 Msa0865440:CDS
GCTTCAATCACTGAGCGAGG+AGG 0.678724 5_4:-66145791 None:intergenic
TTCAAGGTAATAAGAGCACA+CGG 0.684888 5_4:+66145189 Msa0865440:CDS
GATCGTTGAATCCGAAAGCG+AGG 0.685240 5_4:-66138536 None:intergenic
TGCAGAGTGACAGAATTCGG+TGG 0.714678 5_4:+66141501 Msa0865440:intron
ATGGGCAAGAGGCTGTACTG+AGG 0.720091 5_4:+66139962 Msa0865440:CDS
CCGAAAGCGAGGTTACTACG+AGG 0.776363 5_4:-66138525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAATTTATAACTATA+AGG - chr5_4:66140254-66140273 None:intergenic 10.0%
!! AAAAATTACTAATGTATTTA+TGG + chr5_4:66140365-66140384 Msa0865440:intron 10.0%
!!! AGCTTTTAATTTTTTTAATT+AGG + chr5_4:66140691-66140710 Msa0865440:intron 10.0%
!!! GCTTTTAATTTTTTTAATTA+GGG + chr5_4:66140692-66140711 Msa0865440:intron 10.0%
!!! AAAAGAATGAATAATTTTAT+TGG - chr5_4:66142784-66142803 None:intergenic 10.0%
!! GTAATTGAGTAATAAATAAA+AGG - chr5_4:66138233-66138252 None:intergenic 15.0%
!!! AAAGAAGAATTGAATTTTAA+AGG - chr5_4:66138501-66138520 None:intergenic 15.0%
!!! TCATTTTCTTAAATTACTAT+CGG - chr5_4:66139251-66139270 None:intergenic 15.0%
!! TAAGAAAATGAATTTCAAAA+AGG - chr5_4:66139371-66139390 None:intergenic 15.0%
!!! TTTGAAATTCATTTTCTTAA+CGG + chr5_4:66139372-66139391 Msa0865440:intron 15.0%
!! CATAAAAAAAAAAAAAAGAG+AGG - chr5_4:66139856-66139875 None:intergenic 15.0%
!!! CTCTCTTTTTTTTTTTTTTA+TGG + chr5_4:66139854-66139873 Msa0865440:intron 15.0%
!! AGATGATTATTACATAAATT+TGG - chr5_4:66141470-66141489 None:intergenic 15.0%
!! AAATTTATGTAATAATCATC+TGG + chr5_4:66141469-66141488 Msa0865440:intron 15.0%
!! AATATTTGTATTCATTAGTT+AGG + chr5_4:66142591-66142610 Msa0865440:intron 15.0%
!! TTATATCTGATAAAAACAAA+TGG + chr5_4:66142655-66142674 Msa0865440:intron 15.0%
!! TAATATGTATTAAGCAAAAA+GGG - chr5_4:66143842-66143861 None:intergenic 15.0%
!! TTAATATGTATTAAGCAAAA+AGG - chr5_4:66143843-66143862 None:intergenic 15.0%
!!! ATTTTGTTCTGTAAAAAATT+TGG - chr5_4:66145921-66145940 None:intergenic 15.0%
!!! TTTAAAGTCACATAAATGAT+TGG - chr5_4:66139677-66139696 None:intergenic 20.0%
!! TCTAATTTCTCTAATTTCAT+AGG + chr5_4:66140106-66140125 Msa0865440:intron 20.0%
!!! TTGAATATTTCTGTACAAAT+TGG + chr5_4:66140284-66140303 Msa0865440:intron 20.0%
!! TTATCATTAAGGTAAGAAAT+TGG - chr5_4:66141380-66141399 None:intergenic 20.0%
!! GATTATTACATAAATTTGGA+TGG - chr5_4:66141466-66141485 None:intergenic 20.0%
!! TACATTAGTTCAATAAATCT+TGG + chr5_4:66141637-66141656 Msa0865440:intron 20.0%
!! AAGAGAAAAAAAAAGTTACA+CGG + chr5_4:66141726-66141745 Msa0865440:intron 20.0%
!! AAAATTGTTCATTAAGAACT+AGG + chr5_4:66141779-66141798 Msa0865440:intron 20.0%
!!! TTATTATTTTTGCCTTGTTA+GGG - chr5_4:66142262-66142281 None:intergenic 20.0%
!! TATTCATTAGTTAGGATATA+AGG + chr5_4:66142599-66142618 Msa0865440:intron 20.0%
!!! GTTTTTTTTAATTGTGTCAT+GGG - chr5_4:66142851-66142870 None:intergenic 20.0%
!!! TGTTTTTTTTAATTGTGTCA+TGG - chr5_4:66142852-66142871 None:intergenic 20.0%
!! TTACTGTTTGTATTATTTGT+TGG + chr5_4:66142912-66142931 Msa0865440:intron 20.0%
!!! GTTTTGGTTTCTAAATAAAA+TGG + chr5_4:66143409-66143428 Msa0865440:intron 20.0%
!! CATTTCTTATAGAAATACAA+AGG - chr5_4:66143570-66143589 None:intergenic 20.0%
!! TTCTATAAGAAATGAAATTC+AGG + chr5_4:66143576-66143595 Msa0865440:CDS 20.0%
!!! AAATTTAGTTTTTCAACACT+AGG + chr5_4:66143720-66143739 Msa0865440:intron 20.0%
!!! AATTTAGTTTTTCAACACTA+GGG + chr5_4:66143721-66143740 Msa0865440:intron 20.0%
!! AATATGTATTAAGCAAAAAG+GGG - chr5_4:66143841-66143860 None:intergenic 20.0%
!! AAGACATTATACTAACTAAA+GGG - chr5_4:66144554-66144573 None:intergenic 20.0%
!! AAAGACATTATACTAACTAA+AGG - chr5_4:66144555-66144574 None:intergenic 20.0%
!!! ATTGTTTTGAAATTTCTAGA+AGG + chr5_4:66145511-66145530 Msa0865440:CDS 20.0%
!!! TTGTTTTGAAATTTCTAGAA+GGG + chr5_4:66145512-66145531 Msa0865440:CDS 20.0%
!! TATATGTAGAAATAAGTAGA+TGG - chr5_4:66145857-66145876 None:intergenic 20.0%
! AAGGAAAAAATGTTTACAGA+AGG + chr5_4:66138130-66138149 Msa0865440:exon 25.0%
! AAAAATGTTTACAGAAGGAT+TGG + chr5_4:66138135-66138154 Msa0865440:exon 25.0%
!! AGAAGAAAGAAGTTTAAGTT+AGG - chr5_4:66138197-66138216 None:intergenic 25.0%
!!! CTTTTTCGATTAATGAAACA+GGG + chr5_4:66138336-66138355 Msa0865440:intron 25.0%
! AGTGAGATTATTATTGGAAA+GGG - chr5_4:66138457-66138476 None:intergenic 25.0%
! TTTAGGAGTGAGATTATTAT+TGG - chr5_4:66138463-66138482 None:intergenic 25.0%
!!! AATTTTAAAGGAGGTAAAGA+TGG - chr5_4:66138489-66138508 None:intergenic 25.0%
!!! GAAGAATTGAATTTTAAAGG+AGG - chr5_4:66138498-66138517 None:intergenic 25.0%
!!! CTTCTAGAATTAACAGTATT+AGG - chr5_4:66138801-66138820 None:intergenic 25.0%
!! AATTCTAGAAGATTTACTGA+TGG + chr5_4:66138810-66138829 Msa0865440:CDS 25.0%
!! TTTGAATGATTCTGTTGATT+TGG + chr5_4:66138932-66138951 Msa0865440:CDS 25.0%
! ACATAATTCAATGTAATCGT+CGG + chr5_4:66139270-66139289 Msa0865440:intron 25.0%
! TATATATAGCAGTTAGTACA+TGG + chr5_4:66139524-66139543 Msa0865440:intron 25.0%
!!! GTTTAATTTTCATGCACTTT+TGG + chr5_4:66139618-66139637 Msa0865440:intron 25.0%
!! GTTTTACAAAAACACCTATT+TGG + chr5_4:66140048-66140067 Msa0865440:intron 25.0%
! AGAAATAAGAGAAATGATTG+AGG - chr5_4:66140087-66140106 None:intergenic 25.0%
! TGGTTGTATTTGATATTGTT+TGG + chr5_4:66140385-66140404 Msa0865440:intron 25.0%
! TATACAAAGAAGAAAACTGA+AGG + chr5_4:66140474-66140493 Msa0865440:CDS 25.0%
! ATACAAAGAAGAAAACTGAA+GGG + chr5_4:66140475-66140494 Msa0865440:CDS 25.0%
! CCTTTAACTCATTCATATAT+AGG - chr5_4:66140733-66140752 None:intergenic 25.0%
! CCTATATATGAATGAGTTAA+AGG + chr5_4:66140730-66140749 Msa0865440:intron 25.0%
!! TATATGCTTTTACTACTTGA+TGG + chr5_4:66141042-66141061 Msa0865440:intron 25.0%
! ATCTTAAGAGATCTTATAAC+TGG + chr5_4:66141262-66141281 Msa0865440:intron 25.0%
! ATAAATTTGGATGGTGTAAA+GGG - chr5_4:66141457-66141476 None:intergenic 25.0%
! TAAAATCAGGTTATCAGTTT+AGG + chr5_4:66141871-66141890 Msa0865440:intron 25.0%
!!! TATTATTTTTGCCTTGTTAG+GGG - chr5_4:66142261-66142280 None:intergenic 25.0%
!!! CTTATTATTTTTGCCTTGTT+AGG - chr5_4:66142263-66142282 None:intergenic 25.0%
! TTCTTGTAGATATCTATTAC+AGG + chr5_4:66142351-66142370 Msa0865440:intron 25.0%
! TATCTGATAAAAACAAATGG+AGG + chr5_4:66142658-66142677 Msa0865440:intron 25.0%
!! ATTTTTACCTTGAGTTACTT+TGG + chr5_4:66142940-66142959 Msa0865440:intron 25.0%
!!! TTTTTACCTTGAGTTACTTT+GGG + chr5_4:66142941-66142960 Msa0865440:intron 25.0%
!!! CAAAATGAGACTTTTTGTTT+TGG + chr5_4:66143393-66143412 Msa0865440:intron 25.0%
!!! TACAAAGGTTTTTTATCTTC+AGG - chr5_4:66143555-66143574 None:intergenic 25.0%
!!! ATTTAGTTTTTCAACACTAG+GGG + chr5_4:66143722-66143741 Msa0865440:intron 25.0%
! ATATGTATTAAGCAAAAAGG+GGG - chr5_4:66143840-66143859 None:intergenic 25.0%
!! AATTTTCAGTTCAATTGACT+TGG + chr5_4:66143892-66143911 Msa0865440:intron 25.0%
! GAAATGATATTGTAATCTTG+TGG - chr5_4:66144130-66144149 None:intergenic 25.0%
! GTAATTGTGAAACAAATTTC+TGG - chr5_4:66144203-66144222 None:intergenic 25.0%
! TTTGTTTCACAATTACATCA+TGG + chr5_4:66144207-66144226 Msa0865440:CDS 25.0%
!! ACTTACATTTTCCAAATACA+AGG - chr5_4:66144503-66144522 None:intergenic 25.0%
!!! TTGCAAATAAGTTTTGTATC+TGG - chr5_4:66145053-66145072 None:intergenic 25.0%
! ACTTATTTGCAAGCAATAAT+AGG + chr5_4:66145061-66145080 Msa0865440:CDS 25.0%
! CTTATTTGCAAGCAATAATA+GGG + chr5_4:66145062-66145081 Msa0865440:CDS 25.0%
! TACTAGTTGTATATTGTAGT+TGG - chr5_4:66145392-66145411 None:intergenic 25.0%
! AAAACAATCTATCACATTAG+AGG - chr5_4:66145499-66145518 None:intergenic 25.0%
! GAAAATAGAATATGGTACAA+TGG + chr5_4:66145541-66145560 Msa0865440:CDS 25.0%
! ATGTTTCACTTTGTAGATAT+TGG + chr5_4:66145703-66145722 Msa0865440:intron 25.0%
! TAATAGAATCTCTTTCTTGT+TGG - chr5_4:66146054-66146073 None:intergenic 25.0%
! ATTCCTTTACAAAAGTGATA+GGG - chr5_4:66146156-66146175 None:intergenic 25.0%
ACTTCTTCGAACTCAAAAAA+AGG + chr5_4:66138111-66138130 Msa0865440:five_prime_UTR 30.0%
! AGAAAGAAGTTTAAGTTAGG+TGG - chr5_4:66138194-66138213 None:intergenic 30.0%
AGGAAAGTTTGAGTATAAAC+TGG - chr5_4:66138318-66138337 None:intergenic 30.0%
CCTGTTTCATTAATCGAAAA+AGG - chr5_4:66138338-66138357 None:intergenic 30.0%
!!! CCTTTTTCGATTAATGAAAC+AGG + chr5_4:66138335-66138354 Msa0865440:intron 30.0%
GAGTGAGATTATTATTGGAA+AGG - chr5_4:66138458-66138477 None:intergenic 30.0%
TATGATGAGGAACAGTTATT+TGG + chr5_4:66138687-66138706 Msa0865440:CDS 30.0%
! CAGTTATTTGGATTTGGTAA+TGG + chr5_4:66138699-66138718 Msa0865440:CDS 30.0%
!! AAAATTCCACTAGGTTTTAG+GGG - chr5_4:66138738-66138757 None:intergenic 30.0%
! CAAAATTCCACTAGGTTTTA+GGG - chr5_4:66138739-66138758 None:intergenic 30.0%
! TCAAAATTCCACTAGGTTTT+AGG - chr5_4:66138740-66138759 None:intergenic 30.0%
! TAAAACCTAGTGGAATTTTG+AGG + chr5_4:66138739-66138758 Msa0865440:CDS 30.0%
GTAACACAAAGCAACAAAAA+AGG - chr5_4:66139183-66139202 None:intergenic 30.0%
CTGTAAATTTCAACATCAGA+AGG - chr5_4:66139401-66139420 None:intergenic 30.0%
TTATTGAGATATTGCAAGTG+TGG - chr5_4:66139470-66139489 None:intergenic 30.0%
ACTTGCAATATCTCAATAAC+AGG + chr5_4:66139471-66139490 Msa0865440:CDS 30.0%
GATCAATGTATAAGCAAGTT+GGG + chr5_4:66140515-66140534 Msa0865440:CDS 30.0%
AAATGAATCAGAGTCATGTT+CGG + chr5_4:66140816-66140835 Msa0865440:CDS 30.0%
! TCTTATATGTTTCTAACAGC+AGG - chr5_4:66140951-66140970 None:intergenic 30.0%
! ATTCTTATGTTTCTAACAGC+AGG - chr5_4:66141087-66141106 None:intergenic 30.0%
TTTAGACTATTGTCGAAGAA+AGG + chr5_4:66141134-66141153 Msa0865440:intron 30.0%
!! TTGCTTTTCAACTGTTAAGA+AGG - chr5_4:66141182-66141201 None:intergenic 30.0%
CACATACAGGATTATCATTA+AGG - chr5_4:66141391-66141410 None:intergenic 30.0%
GGAATGTCTATGAACAAATA+TGG - chr5_4:66141426-66141445 None:intergenic 30.0%
CATAAATTTGGATGGTGTAA+AGG - chr5_4:66141458-66141477 None:intergenic 30.0%
! CATGATGATAATGAATGTGT+TGG + chr5_4:66141536-66141555 Msa0865440:CDS 30.0%
TGGTGACAACAATCATATAA+AGG + chr5_4:66141595-66141614 Msa0865440:CDS 30.0%
AAAAAAGTTACACGGTATCA+AGG + chr5_4:66141734-66141753 Msa0865440:intron 30.0%
!! ATTTCTTTACCCTATTTCTG+AGG + chr5_4:66141807-66141826 Msa0865440:intron 30.0%
!! TTTCTTTACCCTATTTCTGA+GGG + chr5_4:66141808-66141827 Msa0865440:intron 30.0%
AACATTTACCCTCAGAAATA+GGG - chr5_4:66141819-66141838 None:intergenic 30.0%
CATATCCACTACTTAAAATC+AGG + chr5_4:66141858-66141877 Msa0865440:intron 30.0%
!! GATAACCTGATTTTAAGTAG+TGG - chr5_4:66141866-66141885 None:intergenic 30.0%
!! TTCCTATGAGTAGTTTTACT+TGG + chr5_4:66141953-66141972 Msa0865440:intron 30.0%
!! TCCTATGAGTAGTTTTACTT+GGG + chr5_4:66141954-66141973 Msa0865440:intron 30.0%
TCAAGCCTATGATATATTGT+TGG + chr5_4:66142092-66142111 Msa0865440:CDS 30.0%
CCTCAATTTAGCATATGAAT+CGG - chr5_4:66142217-66142236 None:intergenic 30.0%
GAGAAATCCTTTGTAGATAA+GGG + chr5_4:66142713-66142732 Msa0865440:intron 30.0%
AGAAATCCTTTGTAGATAAG+GGG + chr5_4:66142714-66142733 Msa0865440:intron 30.0%
TTGGATGAATGAGAAAGAAT+AGG - chr5_4:66142765-66142784 None:intergenic 30.0%
!!! TCTCATTTTGTTATTGTTGC+AGG - chr5_4:66143383-66143402 None:intergenic 30.0%
AACAACCATAATACAATCCA+TGG + chr5_4:66143613-66143632 Msa0865440:CDS 30.0%
! CATATTTTTCCCAGGTATTT+TGG + chr5_4:66143640-66143659 Msa0865440:intron 30.0%
AAAATTCAGGCTGTATTTAG+TGG - chr5_4:66144102-66144121 None:intergenic 30.0%
! TCTTGTGGAATCTAAAATTC+AGG - chr5_4:66144115-66144134 None:intergenic 30.0%
TTCACAATTACATCATGGTT+TGG + chr5_4:66144212-66144231 Msa0865440:CDS 30.0%
TGATCTTTGTAAAGCAGAAA+AGG + chr5_4:66144261-66144280 Msa0865440:CDS 30.0%
TCATTTGTTTGTAAGAAGGA+GGG - chr5_4:66144354-66144373 None:intergenic 30.0%
!! TGTGTCATTTGTTTGTAAGA+AGG - chr5_4:66144358-66144377 None:intergenic 30.0%
TTCTTACAAACAAATGACAC+AGG + chr5_4:66144357-66144376 Msa0865440:intron 30.0%
! TCATACATTTTCTCAGCAAA+TGG - chr5_4:66144421-66144440 None:intergenic 30.0%
! TATTGATTACCACTTCATAC+TGG - chr5_4:66144465-66144484 None:intergenic 30.0%
ATGAAGTGGTAATCAATAGA+TGG + chr5_4:66144467-66144486 Msa0865440:CDS 30.0%
! AAATGCACATAGAACGTTTT+AGG - chr5_4:66144526-66144545 None:intergenic 30.0%
! GTATATTTCCCTTTTCATTC+TGG + chr5_4:66144614-66144633 Msa0865440:intron 30.0%
TTTGGTATGCTATCTTTCAA+AGG - chr5_4:66144709-66144728 None:intergenic 30.0%
! AACAATTTGTTTCATCCAGT+TGG + chr5_4:66144877-66144896 Msa0865440:intron 30.0%
! ACAATTTGTTTCATCCAGTT+GGG + chr5_4:66144878-66144897 Msa0865440:intron 30.0%
ATATAGAGCCAACATGAATA+GGG - chr5_4:66145124-66145143 None:intergenic 30.0%
GACATATTGCTATGAAGATT+TGG - chr5_4:66145337-66145356 None:intergenic 30.0%
!!! TTTTGAAATTTCTAGAAGGG+AGG + chr5_4:66145515-66145534 Msa0865440:CDS 30.0%
GGAGGAAAGAAAATAGAATA+TGG + chr5_4:66145533-66145552 Msa0865440:CDS 30.0%
ACACAAGAAAAAGACAACAT+AGG - chr5_4:66145610-66145629 None:intergenic 30.0%
CATTCCTTTACAAAAGTGAT+AGG - chr5_4:66146157-66146176 None:intergenic 30.0%
CGAAGAAGTAGAAGAATCAA+TGG - chr5_4:66138100-66138119 None:intergenic 35.0%
TGGTTACCTTATTGATCCAT+TGG - chr5_4:66138174-66138193 None:intergenic 35.0%
!!! GGTGATTTTTTCTCAGTTAG+AGG - chr5_4:66138405-66138424 None:intergenic 35.0%
! ATCTTCTTCGTTTTCGTCAT+CGG - chr5_4:66138625-66138644 None:intergenic 35.0%
TCATCATAGCATTGTGCAAT+TGG - chr5_4:66138675-66138694 None:intergenic 35.0%
AATTGCACAATGCTATGATG+AGG + chr5_4:66138674-66138693 Msa0865440:CDS 35.0%
GAGGAACAGTTATTTGGATT+TGG + chr5_4:66138693-66138712 Msa0865440:CDS 35.0%
AGATTTACTGATGGAGAGTT+AGG + chr5_4:66138819-66138838 Msa0865440:CDS 35.0%
TCACCATCAACAAATATAGG+AGG - chr5_4:66138972-66138991 None:intergenic 35.0%
CCTTCACCATCAACAAATAT+AGG - chr5_4:66138975-66138994 None:intergenic 35.0%
!! CCTATATTTGTTGATGGTGA+AGG + chr5_4:66138972-66138991 Msa0865440:CDS 35.0%
TGAAGGTGATGTCAGTTATT+CGG + chr5_4:66138989-66139008 Msa0865440:CDS 35.0%
GATTCTGTGAATTGTGATGA+TGG + chr5_4:66139080-66139099 Msa0865440:CDS 35.0%
TACCTTTCAGCAACAGTATT+AGG - chr5_4:66139140-66139159 None:intergenic 35.0%
!! ACTCATCTTTTAGAAACTCC+GGG - chr5_4:66139989-66140008 None:intergenic 35.0%
!! CACTCATCTTTTAGAAACTC+CGG - chr5_4:66139990-66140009 None:intergenic 35.0%
! GTTTCTAAAAGATGAGTGTC+TGG + chr5_4:66139992-66140011 Msa0865440:CDS 35.0%
GACAATGAATGAAGCCAAAT+AGG - chr5_4:66140065-66140084 None:intergenic 35.0%
CTTGCTTATACATTGATCCT+CGG - chr5_4:66140513-66140532 None:intergenic 35.0%
GGATCAATGTATAAGCAAGT+TGG + chr5_4:66140514-66140533 Msa0865440:CDS 35.0%
! AATGTATAAGCAAGTTGGGA+TGG + chr5_4:66140519-66140538 Msa0865440:CDS 35.0%
!! CTGTATACCACTTTTCACAA+GGG - chr5_4:66140566-66140585 None:intergenic 35.0%
!! ACTGTATACCACTTTTCACA+AGG - chr5_4:66140567-66140586 None:intergenic 35.0%
AAGTGGTATACAGTCTATGA+AGG + chr5_4:66140573-66140592 Msa0865440:CDS 35.0%
AGAAGGTTAGTGCATATTTG+AGG + chr5_4:66140618-66140637 Msa0865440:intron 35.0%
CTCAACTTATCAGCTATGAA+TGG - chr5_4:66140673-66140692 None:intergenic 35.0%
AGTTGGATCAAACAATGCAT+TGG - chr5_4:66140778-66140797 None:intergenic 35.0%
! AGAAGTCCAAGATTCTAAGA+AGG + chr5_4:66141331-66141350 Msa0865440:CDS 35.0%
AAGGTAAGAAATTGGAATCC+TGG - chr5_4:66141372-66141391 None:intergenic 35.0%
ATATGCAGAGTGACAGAATT+CGG + chr5_4:66141498-66141517 Msa0865440:intron 35.0%
! ATTGGAAGTACAATGACAAG+TGG + chr5_4:66141575-66141594 Msa0865440:CDS 35.0%
ACGGTATCAAGGATTATAGA+TGG + chr5_4:66141745-66141764 Msa0865440:intron 35.0%
CAACATTTACCCTCAGAAAT+AGG - chr5_4:66141820-66141839 None:intergenic 35.0%
AACTAACAAGTCCTCTCTAT+CGG - chr5_4:66141924-66141943 None:intergenic 35.0%
ACCCAAGTAAAACTACTCAT+AGG - chr5_4:66141958-66141977 None:intergenic 35.0%
!! AGGATTATGTTGGTGGTTAT+TGG - chr5_4:66141986-66142005 None:intergenic 35.0%
AAAGCAGGAAAGGATTATGT+TGG - chr5_4:66141996-66142015 None:intergenic 35.0%
TCAAACTCAGAATGAAAAGC+AGG - chr5_4:66142011-66142030 None:intergenic 35.0%
AGCCTATGATATATTGTTGG+AGG + chr5_4:66142095-66142114 Msa0865440:CDS 35.0%
GCCTATGATATATTGTTGGA+GGG + chr5_4:66142096-66142115 Msa0865440:CDS 35.0%
ACCCTCCAACAATATATCAT+AGG - chr5_4:66142100-66142119 None:intergenic 35.0%
CCGATTCATATGCTAAATTG+AGG + chr5_4:66142214-66142233 Msa0865440:CDS 35.0%
TGAGGTAGTTGAATATCATC+TGG + chr5_4:66142232-66142251 Msa0865440:intron 35.0%
ATATCTACAAGAAGACCACA+AGG - chr5_4:66142344-66142363 None:intergenic 35.0%
! GTTAGGATATAAGGACTAGT+TGG + chr5_4:66142608-66142627 Msa0865440:intron 35.0%
GGAGAAATCCTTTGTAGATA+AGG + chr5_4:66142712-66142731 Msa0865440:intron 35.0%
!! CTCACAGAGAAGTATACTTT+TGG + chr5_4:66142999-66143018 Msa0865440:intron 35.0%
AAATGATCGGTTAAACCTGT+TGG - chr5_4:66143096-66143115 None:intergenic 35.0%
! ACAGGTTTAACCGATCATTT+TGG + chr5_4:66143096-66143115 Msa0865440:CDS 35.0%
AGATGCTAGACCAAAATGAT+CGG - chr5_4:66143109-66143128 None:intergenic 35.0%
TATTCTACAGAACTATCTGC+AGG + chr5_4:66143209-66143228 Msa0865440:CDS 35.0%
AATGTAACTGAGCCTTGAAA+AGG + chr5_4:66143276-66143295 Msa0865440:intron 35.0%
! GGTATCACTAAACCTTTTCA+AGG - chr5_4:66143291-66143310 None:intergenic 35.0%
ATGATCCAGAAGACTTTATG+AGG - chr5_4:66143359-66143378 None:intergenic 35.0%
AAGGTGTAGAAAACACATGA+TGG + chr5_4:66143459-66143478 Msa0865440:CDS 35.0%
GAATTGTAGCCAAAATACCT+GGG - chr5_4:66143652-66143671 None:intergenic 35.0%
AGAATTGTAGCCAAAATACC+TGG - chr5_4:66143653-66143672 None:intergenic 35.0%
ATCTCGAGTCATGGAATATA+AGG + chr5_4:66144047-66144066 Msa0865440:CDS 35.0%
GTCATTTGTTTGTAAGAAGG+AGG - chr5_4:66144355-66144374 None:intergenic 35.0%
CAACTTAATCCAGTATGAAG+TGG + chr5_4:66144453-66144472 Msa0865440:CDS 35.0%
!! TCCAAATACAAGGAGTATTG+AGG - chr5_4:66144493-66144512 None:intergenic 35.0%
! ATTTCCCTTTTCATTCTGGA+AGG + chr5_4:66144618-66144637 Msa0865440:intron 35.0%
CAGAGATAACTTACTTGGTT+AGG - chr5_4:66144793-66144812 None:intergenic 35.0%
TGTTCAAGAATATACCCAAC+TGG - chr5_4:66144895-66144914 None:intergenic 35.0%
TATTCTTGAACACCATCAAG+AGG + chr5_4:66144903-66144922 Msa0865440:CDS 35.0%
TGGAAGACATCCTAAATTCA+TGG + chr5_4:66144951-66144970 Msa0865440:CDS 35.0%
GGAAGACATCCTAAATTCAT+GGG + chr5_4:66144952-66144971 Msa0865440:CDS 35.0%
ATGGGAGATAAGAAGTTGTT+TGG + chr5_4:66144992-66145011 Msa0865440:CDS 35.0%
TTGTTTGGAGAGCAAATGAA+TGG + chr5_4:66145007-66145026 Msa0865440:CDS 35.0%
TATAGAGCCAACATGAATAG+GGG - chr5_4:66145123-66145142 None:intergenic 35.0%
GATATAGAGCCAACATGAAT+AGG - chr5_4:66145125-66145144 None:intergenic 35.0%
CCTTGAATCTGAACAATTTG+TGG - chr5_4:66145176-66145195 None:intergenic 35.0%
CCACAAATTGTTCAGATTCA+AGG + chr5_4:66145173-66145192 Msa0865440:intron 35.0%
! TTCAAGGTAATAAGAGCACA+CGG + chr5_4:66145189-66145208 Msa0865440:CDS 35.0%
TATTGCTATGAAGATTTGGC+TGG - chr5_4:66145333-66145352 None:intergenic 35.0%
ATCTTCATAGCAATATGTCG+TGG + chr5_4:66145338-66145357 Msa0865440:CDS 35.0%
TCTCAGATGCAAAGATTAAG+AGG + chr5_4:66145740-66145759 Msa0865440:CDS 35.0%
!! AAAAGTGTTCTCGCTTGTAA+AGG + chr5_4:66145989-66146008 Msa0865440:three_prime_UTR 35.0%
! AAAGTGTTCTCGCTTGTAAA+GGG + chr5_4:66145990-66146009 Msa0865440:three_prime_UTR 35.0%
TCGCTTGTAAAGGGAAAATT+AGG + chr5_4:66145999-66146018 Msa0865440:three_prime_UTR 35.0%
CGCTTGTAAAGGGAAAATTA+GGG + chr5_4:66146000-66146019 Msa0865440:three_prime_UTR 35.0%
AATTTCCTTCACGAAGAGTA+TGG + chr5_4:66146090-66146109 Msa0865440:three_prime_UTR 35.0%
CACTCTTATTGGTAAGAGAT+TGG - chr5_4:66146130-66146149 None:intergenic 35.0%
CAATCTCTTACCAATAAGAG+TGG + chr5_4:66146128-66146147 Msa0865440:three_prime_UTR 35.0%
!! GTACCCTATCACTTTTGTAA+AGG + chr5_4:66146150-66146169 Msa0865440:three_prime_UTR 35.0%
TGCACTCCAATGGATCAATA+AGG + chr5_4:66138165-66138184 Msa0865440:CDS 40.0%
AAAAGAGGTGATCTAGGAAG+AGG - chr5_4:66138426-66138445 None:intergenic 40.0%
GGAGGTAAAGATGGAGATTT+AGG - chr5_4:66138480-66138499 None:intergenic 40.0%
!! ACCTAGTGGAATTTTGAGGA+AGG + chr5_4:66138743-66138762 Msa0865440:CDS 40.0%
!! CCTAGTGGAATTTTGAGGAA+GGG + chr5_4:66138744-66138763 Msa0865440:CDS 40.0%
!! TGGAATTTTGAGGAAGGGTT+TGG + chr5_4:66138749-66138768 Msa0865440:CDS 40.0%
CAGAAGAAAATGACTCCATG+TGG + chr5_4:66138858-66138877 Msa0865440:CDS 40.0%
ACTCCATGTGGAAGTGAAAT+TGG + chr5_4:66138870-66138889 Msa0865440:CDS 40.0%
GTACCAATTTCACTTCCACA+TGG - chr5_4:66138876-66138895 None:intergenic 40.0%
AAATTGGTACTGCTGGAAGA+GGG + chr5_4:66138886-66138905 Msa0865440:CDS 40.0%
!! ACAAATATAGGAGGAGCACT+TGG - chr5_4:66138963-66138982 None:intergenic 40.0%
! GCTCCTCCTATATTTGTTGA+TGG + chr5_4:66138966-66138985 Msa0865440:CDS 40.0%
!! TCTGTGAATTGTGATGATGG+AGG + chr5_4:66139083-66139102 Msa0865440:CDS 40.0%
TGCCTAATACTGTTGCTGAA+AGG + chr5_4:66139135-66139154 Msa0865440:CDS 40.0%
!! GTGTTACTTTCCATGAAGCA+CGG + chr5_4:66139196-66139215 Msa0865440:intron 40.0%
ATGAAGCACGGACACAAAAT+CGG + chr5_4:66139208-66139227 Msa0865440:intron 40.0%
TTCAATGTAATCGTCGGTGT+CGG + chr5_4:66139276-66139295 Msa0865440:intron 40.0%
TCAAGAAACAACCTCTACAC+AGG + chr5_4:66139421-66139440 Msa0865440:CDS 40.0%
CAAGAAACAACCTCTACACA+GGG + chr5_4:66139422-66139441 Msa0865440:CDS 40.0%
TTGAGATATTGCAAGTGTGG+AGG - chr5_4:66139467-66139486 None:intergenic 40.0%
GAAAACCTGCATCATAAGAG+TGG - chr5_4:66139738-66139757 None:intergenic 40.0%
!! CTCATCTTTTAGAAACTCCG+GGG - chr5_4:66139988-66140007 None:intergenic 40.0%
ACCAAATGAAACCTACCCAA+AGG - chr5_4:66140030-66140049 None:intergenic 40.0%
TTCCTTGTACTACCTTCAGT+TGG - chr5_4:66140168-66140187 None:intergenic 40.0%
ACAACCTTCTTTGTCTTGAG+AGG - chr5_4:66140207-66140226 None:intergenic 40.0%
TCTCAAGACAAAGAAGGTTG+TGG + chr5_4:66140206-66140225 Msa0865440:CDS 40.0%
CTCAAGACAAAGAAGGTTGT+GGG + chr5_4:66140207-66140226 Msa0865440:CDS 40.0%
TCAAGACAAAGAAGGTTGTG+GGG + chr5_4:66140208-66140227 Msa0865440:CDS 40.0%
TACATATATGCGCACGTGTT+TGG - chr5_4:66140341-66140360 None:intergenic 40.0%
GTTTCATCCCTTGTGAAAAG+TGG + chr5_4:66140556-66140575 Msa0865440:CDS 40.0%
GGTTAGTGCATATTTGAGGA+AGG + chr5_4:66140622-66140641 Msa0865440:intron 40.0%
CATGATAATCTCCACTTCCA+GGG - chr5_4:66140855-66140874 None:intergenic 40.0%
TCATGATAATCTCCACTTCC+AGG - chr5_4:66140856-66140875 None:intergenic 40.0%
ATGGTGTAAAGGGAAAGAAG+AGG - chr5_4:66141447-66141466 None:intergenic 40.0%
TTGTACTTCCAATTGAGAGC+TGG - chr5_4:66141568-66141587 None:intergenic 40.0%
! TCATCTTCCAAGTTGACAAC+TGG + chr5_4:66141700-66141719 Msa0865440:intron 40.0%
TCTTTGTCCAGTTGTCAACT+TGG - chr5_4:66141710-66141729 None:intergenic 40.0%
CTGAGGGTAAATGTTGTTGA+TGG + chr5_4:66141824-66141843 Msa0865440:intron 40.0%
! GGTAAATGTTGTTGATGGAG+AGG + chr5_4:66141829-66141848 Msa0865440:intron 40.0%
CTCAGAATGAAAAGCAGGAA+AGG - chr5_4:66142006-66142025 None:intergenic 40.0%
CTGCAGTGTATGCAAAAACA+GGG - chr5_4:66142052-66142071 None:intergenic 40.0%
TCTGCAGTGTATGCAAAAAC+AGG - chr5_4:66142053-66142072 None:intergenic 40.0%
GCATCTAACAACCATTTCCA+TGG - chr5_4:66142171-66142190 None:intergenic 40.0%
! GATGCATTTGCTGACTACTA+TGG + chr5_4:66142186-66142205 Msa0865440:CDS 40.0%
GTTACTTGATCCCCTAATGA+AGG + chr5_4:66142423-66142442 Msa0865440:CDS 40.0%
TCTGTACATTGACGAATTCG+TGG + chr5_4:66142686-66142705 Msa0865440:intron 40.0%
ACATTGACGAATTCGTGGAT+AGG + chr5_4:66142691-66142710 Msa0865440:intron 40.0%
TGGTTTCCCCTTATCTACAA+AGG - chr5_4:66142723-66142742 None:intergenic 40.0%
TGTAGATAAGGGGAAACCAT+TGG + chr5_4:66142724-66142743 Msa0865440:intron 40.0%
GCAAATCCCAAAGTAACTCA+AGG - chr5_4:66142950-66142969 None:intergenic 40.0%
!! ATACCTTCTGCTGGTTTATG+AGG + chr5_4:66143306-66143325 Msa0865440:intron 40.0%
TACCTCCTCATAAAGTCTTC+TGG + chr5_4:66143351-66143370 Msa0865440:intron 40.0%
ATCCAGAAGACTTTATGAGG+AGG - chr5_4:66143356-66143375 None:intergenic 40.0%
GGAGACTGATGAATTTGTGT+CGG + chr5_4:66143480-66143499 Msa0865440:CDS 40.0%
GAGACTGATGAATTTGTGTC+GGG + chr5_4:66143481-66143500 Msa0865440:CDS 40.0%
TGCCTCAGAAAGTTACCAAA+TGG + chr5_4:66143504-66143523 Msa0865440:CDS 40.0%
! GTCCATTTGGTAACTTTCTG+AGG - chr5_4:66143509-66143528 None:intergenic 40.0%
! AGATGGTAATGCTGTCCATT+TGG - chr5_4:66143522-66143541 None:intergenic 40.0%
! GCTGACCATGGATTGTATTA+TGG - chr5_4:66143621-66143640 None:intergenic 40.0%
TGGGAAAAATATGCTGACCA+TGG - chr5_4:66143633-66143652 None:intergenic 40.0%
! ATGGTCAGCATATTTTTCCC+AGG + chr5_4:66143632-66143651 Msa0865440:CDS 40.0%
ACACAGCTCTGTGCTATAAA+TGG - chr5_4:66143933-66143952 None:intergenic 40.0%
ATAGCACAGAGCTGTGTAAA+AGG + chr5_4:66143936-66143955 Msa0865440:CDS 40.0%
TGAGAACTTTCCTTTCTGCA+TGG + chr5_4:66143960-66143979 Msa0865440:CDS 40.0%
ACTAGAAGCTCATTCACATG+TGG - chr5_4:66144004-66144023 None:intergenic 40.0%
ACATGTGAATGAGCTTCTAG+TGG + chr5_4:66144003-66144022 Msa0865440:CDS 40.0%
TTCATGTTTCAGTTCTGTGC+AGG + chr5_4:66144165-66144184 Msa0865440:intron 40.0%
TCATGTTTCAGTTCTGTGCA+GGG + chr5_4:66144166-66144185 Msa0865440:intron 40.0%
AACAAATGACACAGGTTCCA+TGG + chr5_4:66144365-66144384 Msa0865440:intron 40.0%
ACAAATGACACAGGTTCCAT+GGG + chr5_4:66144366-66144385 Msa0865440:intron 40.0%
TGGTGAAGTGGAATGATTTG+TGG - chr5_4:66144401-66144420 None:intergenic 40.0%
TTTCTCAGCAAATGGTGAAG+TGG - chr5_4:66144413-66144432 None:intergenic 40.0%
GCCTCAATACTCCTTGTATT+TGG + chr5_4:66144489-66144508 Msa0865440:CDS 40.0%
ACAGCCTTCCAGAATGAAAA+GGG - chr5_4:66144625-66144644 None:intergenic 40.0%
AGGCTGTGGCAAATATTGAA+AGG + chr5_4:66144638-66144657 Msa0865440:intron 40.0%
GGCTGTGGCAAATATTGAAA+GGG + chr5_4:66144639-66144658 Msa0865440:intron 40.0%
ACTTGCAAGTGAAGTCTCTT+TGG - chr5_4:66144727-66144746 None:intergenic 40.0%
GCATGCAGAGATAACTTACT+TGG - chr5_4:66144798-66144817 None:intergenic 40.0%
GACATCAAGTATCCTCTTGA+TGG - chr5_4:66144918-66144937 None:intergenic 40.0%
TGATGTCCTACATTGTAGAG+TGG + chr5_4:66144931-66144950 Msa0865440:CDS 40.0%
TGTCTTCCACTCTACAATGT+AGG - chr5_4:66144940-66144959 None:intergenic 40.0%
AACTTCTTATCTCCCATGAC+AGG - chr5_4:66144989-66145008 None:intergenic 40.0%
!! GTATCTGGTTCTCAGTAACA+CGG - chr5_4:66145038-66145057 None:intergenic 40.0%
TAAGACTCCCCTATTCATGT+TGG + chr5_4:66145113-66145132 Msa0865440:intron 40.0%
! TAGCAATATGTCGTGGATTG+TGG + chr5_4:66145345-66145364 Msa0865440:CDS 40.0%
! AGCAATATGTCGTGGATTGT+GGG + chr5_4:66145346-66145365 Msa0865440:CDS 40.0%
TTCTTGTTGGCAAATGCCAT+GGG - chr5_4:66146041-66146060 None:intergenic 40.0%
TTTCTTGTTGGCAAATGCCA+TGG - chr5_4:66146042-66146061 None:intergenic 40.0%
! TGATAGGGTACCACTCTTAT+TGG - chr5_4:66146141-66146160 None:intergenic 40.0%
TGGATGAAACTGCACTCCAA+TGG + chr5_4:66138155-66138174 Msa0865440:CDS 45.0%
CCAGATCGAATCACAATAGG+TGG - chr5_4:66138263-66138282 None:intergenic 45.0%
CCACCTATTGTGATTCGATC+TGG + chr5_4:66138260-66138279 Msa0865440:intron 45.0%
GAGCCAGATCGAATCACAAT+AGG - chr5_4:66138266-66138285 None:intergenic 45.0%
GTTGCGAAAAGAGGTGATCT+AGG - chr5_4:66138432-66138451 None:intergenic 45.0%
GAAAGGGTTGTTGCGAAAAG+AGG - chr5_4:66138441-66138460 None:intergenic 45.0%
!!! CCACTAGGTTTTAGGGGTTT+AGG - chr5_4:66138732-66138751 None:intergenic 45.0%
CCTAAACCCCTAAAACCTAG+TGG + chr5_4:66138729-66138748 Msa0865440:CDS 45.0%
CCCTTCCTCAAAATTCCACT+AGG - chr5_4:66138747-66138766 None:intergenic 45.0%
GGAAGTGAAATTGGTACTGC+TGG + chr5_4:66138879-66138898 Msa0865440:CDS 45.0%
GAAATTGGTACTGCTGGAAG+AGG + chr5_4:66138885-66138904 Msa0865440:CDS 45.0%
AATTGGTACTGCTGGAAGAG+GGG + chr5_4:66138887-66138906 Msa0865440:CDS 45.0%
GGTGATGTCAGTTATTCGGA+AGG + chr5_4:66138993-66139012 Msa0865440:CDS 45.0%
!! TTCATCGACTTGATTCGCCA+CGG - chr5_4:66139021-66139040 None:intergenic 45.0%
AAATGACTCAGCAGCAGGAT+AGG + chr5_4:66139039-66139058 Msa0865440:CDS 45.0%
!! GTGAATTGTGATGATGGAGG+AGG + chr5_4:66139086-66139105 Msa0865440:CDS 45.0%
! GATTTTGTGTCCGTGCTTCA+TGG - chr5_4:66139209-66139228 None:intergenic 45.0%
TTCTTGCATTAGACGTGTCC+TGG - chr5_4:66139321-66139340 None:intergenic 45.0%
GAAGTGTGTGTGTGCTTCAT+AGG + chr5_4:66139338-66139357 Msa0865440:intron 45.0%
TCTTTCTATGCCCTGTGTAG+AGG - chr5_4:66139435-66139454 None:intergenic 45.0%
TACACAGGGCATAGAAAGAC+AGG + chr5_4:66139436-66139455 Msa0865440:CDS 45.0%
AGATATTGCAAGTGTGGAGG+AGG - chr5_4:66139464-66139483 None:intergenic 45.0%
AGTTGCCACTCTTATGATGC+AGG + chr5_4:66139730-66139749 Msa0865440:intron 45.0%
GTAAGTGATAAGGGTTTGCC+AGG - chr5_4:66139913-66139932 None:intergenic 45.0%
GCCTTTGGGTAGGTTTCATT+TGG + chr5_4:66140026-66140045 Msa0865440:intron 45.0%
!! TCAGTTGGCTTTATACCTCG+AGG - chr5_4:66140153-66140172 None:intergenic 45.0%
CGAGGTATAAAGCCAACTGA+AGG + chr5_4:66140153-66140172 Msa0865440:CDS 45.0%
AGCCAACTGAAGGTAGTACA+AGG + chr5_4:66140163-66140182 Msa0865440:CDS 45.0%
AGTGCCTCTCAAGACAAAGA+AGG + chr5_4:66140200-66140219 Msa0865440:CDS 45.0%
GGTTGTGGGGAAAATAAGAG+TGG + chr5_4:66140221-66140240 Msa0865440:CDS 45.0%
GTGGGGAAAATAAGAGTGGA+AGG + chr5_4:66140225-66140244 Msa0865440:CDS 45.0%
! TATGCGCACGTGTTTGGAAT+TGG - chr5_4:66140335-66140354 None:intergenic 45.0%
!! AAGGGCACATTTTCAAACCG+AGG + chr5_4:66140493-66140512 Msa0865440:CDS 45.0%
TCACTCTCAGTGACAGAAGA+AGG + chr5_4:66140601-66140620 Msa0865440:CDS 45.0%
CTTCTGTTGCACTCTTGAGT+TGG - chr5_4:66140795-66140814 None:intergenic 45.0%
! ATTTTTCTTCGCCCTGGAAG+TGG + chr5_4:66140841-66140860 Msa0865440:CDS 45.0%
TGTCGAAGAAAGGTTACACG+AGG + chr5_4:66141144-66141163 Msa0865440:intron 45.0%
GTCGAAGAAAGGTTACACGA+GGG + chr5_4:66141145-66141164 Msa0865440:intron 45.0%
TTCAGTTTCCCATTGAGCCA+AGG + chr5_4:66141293-66141312 Msa0865440:intron 45.0%
TCAGTTTCCCATTGAGCCAA+GGG + chr5_4:66141294-66141313 Msa0865440:intron 45.0%
! CTACCAATAAAGCATCCCCT+TGG - chr5_4:66141313-66141332 None:intergenic 45.0%
GGACTGCCTTCTTAGAATCT+TGG - chr5_4:66141340-66141359 None:intergenic 45.0%
! GATTCTAAGAAGGCAGTCCA+TGG + chr5_4:66141341-66141360 Msa0865440:CDS 45.0%
GCAGGAAAGGATTATGTTGG+TGG - chr5_4:66141993-66142012 None:intergenic 45.0%
TAGGCTTGAGTTTCCACAAC+AGG - chr5_4:66142081-66142100 None:intergenic 45.0%
TCATCTGGATTCCCCTAACA+AGG + chr5_4:66142247-66142266 Msa0865440:intron 45.0%
TTGAACCTTCGCTTACCTTG+TGG + chr5_4:66142326-66142345 Msa0865440:intron 45.0%
GAATGTAGCAACTCCAACCA+AGG + chr5_4:66142378-66142397 Msa0865440:CDS 45.0%
GTAACTCTTTCACAAGCTCC+AGG - chr5_4:66142408-66142427 None:intergenic 45.0%
! TCACTTCTGGCCTTCATTAG+GGG - chr5_4:66142436-66142455 None:intergenic 45.0%
! CTCACTTCTGGCCTTCATTA+GGG - chr5_4:66142437-66142456 None:intergenic 45.0%
! TCTCACTTCTGGCCTTCATT+AGG - chr5_4:66142438-66142457 None:intergenic 45.0%
AGTCAGACTTCTCTCACTTC+TGG - chr5_4:66142449-66142468 None:intergenic 45.0%
GAAGTGAGAGAAGTCTGACT+AGG + chr5_4:66142449-66142468 Msa0865440:CDS 45.0%
CTTGATGAAAACTCGCCAAC+AGG + chr5_4:66143078-66143097 Msa0865440:CDS 45.0%
TGTAGAGCAGGATGTAAAGC+TGG - chr5_4:66143144-66143163 None:intergenic 45.0%
CTACTGTAGACTTGTAGAGC+AGG - chr5_4:66143156-66143175 None:intergenic 45.0%
GGTTTAGTGATACCTTCTGC+TGG + chr5_4:66143297-66143316 Msa0865440:intron 45.0%
GAACCTCATAAACCAGCAGA+AGG - chr5_4:66143312-66143331 None:intergenic 45.0%
GACAGACTGCAGCAAGAAAA+AGG + chr5_4:66143440-66143459 Msa0865440:intron 45.0%
GGACAGCATTACCATCTCAA+CGG + chr5_4:66143525-66143544 Msa0865440:CDS 45.0%
GCTGTATTTAGTGGTGCAAG+AGG - chr5_4:66144093-66144112 None:intergenic 45.0%
CACAGCCTTCCAGAATGAAA+AGG - chr5_4:66144626-66144645 None:intergenic 45.0%
!! CTTTTCATTCTGGAAGGCTG+TGG + chr5_4:66144624-66144643 Msa0865440:intron 45.0%
GACAGGATGCCCATGAATTT+AGG - chr5_4:66144964-66144983 None:intergenic 45.0%
ACGGCTGAAAAAGATGCTTG+AGG + chr5_4:66145208-66145227 Msa0865440:CDS 45.0%
GAGAAGCAGAAGTTCGTGAA+AGG + chr5_4:66145249-66145268 Msa0865440:CDS 45.0%
CTTCATCTCCAACCTTCATG+AGG + chr5_4:66145301-66145320 Msa0865440:CDS 45.0%
GGTAAAGACCTCATGAAGGT+TGG - chr5_4:66145312-66145331 None:intergenic 45.0%
AATGGATCTTGCTACGCTCT+TGG + chr5_4:66145559-66145578 Msa0865440:CDS 45.0%
ATGGATCTTGCTACGCTCTT+GGG + chr5_4:66145560-66145579 Msa0865440:CDS 45.0%
CTTTGCCATACTCTTCGTGA+AGG - chr5_4:66146098-66146117 None:intergenic 45.0%
!! TTATATATCTAAAAATAAAA+TGG + chr5_4:66144328-66144347 Msa0865440:intron 5.0%
! TTGTGATTCGATCTGGCTCG+AGG + chr5_4:66138267-66138286 Msa0865440:intron 50.0%
! TGTGATTCGATCTGGCTCGA+GGG + chr5_4:66138268-66138287 Msa0865440:intron 50.0%
CCTCGTAGTAACCTCGCTTT+CGG + chr5_4:66138525-66138544 Msa0865440:CDS 50.0%
GATCGTTGAATCCGAAAGCG+AGG - chr5_4:66138539-66138558 None:intergenic 50.0%
CAGTTATTCGGAAGGATCCG+TGG + chr5_4:66139001-66139020 Msa0865440:CDS 50.0%
CGATGAAATGACTCAGCAGC+AGG + chr5_4:66139034-66139053 Msa0865440:CDS 50.0%
CACTAATGCATGTCTGCACC+AGG + chr5_4:66139300-66139319 Msa0865440:intron 50.0%
CTTGCAGTAGTCAAGATGCC+TGG + chr5_4:66139892-66139911 Msa0865440:CDS 50.0%
! GCAGGCGTCGTAAGTGATAA+GGG - chr5_4:66139922-66139941 None:intergenic 50.0%
! TGCAGGCGTCGTAAGTGATA+AGG - chr5_4:66139923-66139942 None:intergenic 50.0%
TTGCAGGCATAGACGAATGC+AGG - chr5_4:66139940-66139959 None:intergenic 50.0%
TTCGTCTATGCCTGCAAGCA+TGG + chr5_4:66139943-66139962 Msa0865440:CDS 50.0%
TCGTCTATGCCTGCAAGCAT+GGG + chr5_4:66139944-66139963 Msa0865440:CDS 50.0%
! TGGCTCTTCGAAGTGCCTTT+GGG + chr5_4:66140012-66140031 Msa0865440:CDS 50.0%
! TCTTCGAAGTGCCTTTGGGT+AGG + chr5_4:66140016-66140035 Msa0865440:intron 50.0%
GAGTTCTTGTTGCAACCTCG+AGG + chr5_4:66140135-66140154 Msa0865440:CDS 50.0%
AAGTTGGGATGGAGTACGTC+AGG + chr5_4:66140530-66140549 Msa0865440:CDS 50.0%
! TCGGCAATTTTTCTTCGCCC+TGG + chr5_4:66140835-66140854 Msa0865440:CDS 50.0%
CAGTTTCCCATTGAGCCAAG+GGG + chr5_4:66141295-66141314 Msa0865440:intron 50.0%
AAGCATCCCCTTGGCTCAAT+GGG - chr5_4:66141304-66141323 None:intergenic 50.0%
! AAAGCATCCCCTTGGCTCAA+TGG - chr5_4:66141305-66141324 None:intergenic 50.0%
GAGCCAAGGGGATGCTTTAT+TGG + chr5_4:66141307-66141326 Msa0865440:CDS 50.0%
TTGGAATCCTGGCTTCACCA+TGG - chr5_4:66141361-66141380 None:intergenic 50.0%
TGCAGAGTGACAGAATTCGG+TGG + chr5_4:66141501-66141520 Msa0865440:intron 50.0%
! AGAGTGACAGAATTCGGTGG+TGG + chr5_4:66141504-66141523 Msa0865440:intron 50.0%
! GAGTGACAGAATTCGGTGGT+GGG + chr5_4:66141505-66141524 Msa0865440:intron 50.0%
GGCAAGATCCAGCTCTCAAT+TGG + chr5_4:66141557-66141576 Msa0865440:CDS 50.0%
TCCAGTTCGATCCGATAGAG+AGG + chr5_4:66141910-66141929 Msa0865440:intron 50.0%
TCCTCTCTATCGGATCGAAC+TGG - chr5_4:66141914-66141933 None:intergenic 50.0%
GTTTCCACTCCCGAAACTTG+CGG + chr5_4:66142136-66142155 Msa0865440:CDS 50.0%
TCCCGAAACTTGCGGCTAAA+TGG + chr5_4:66142144-66142163 Msa0865440:CDS 50.0%
CCCATTTAGCCGCAAGTTTC+GGG - chr5_4:66142148-66142167 None:intergenic 50.0%
CCCGAAACTTGCGGCTAAAT+GGG + chr5_4:66142145-66142164 Msa0865440:CDS 50.0%
GCCCATTTAGCCGCAAGTTT+CGG - chr5_4:66142149-66142168 None:intergenic 50.0%
GGCTAAATGGGCCATGGAAA+TGG + chr5_4:66142157-66142176 Msa0865440:CDS 50.0%
GAAGACCACAAGGTAAGCGA+AGG - chr5_4:66142334-66142353 None:intergenic 50.0%
GAGAAGTCTGACTAGGCAAG+AGG + chr5_4:66142456-66142475 Msa0865440:CDS 50.0%
GAGAGACATCTCTCAGCCAA+TGG - chr5_4:66142743-66142762 None:intergenic 50.0%
CTTCAGGTATGCCGTTGAGA+TGG - chr5_4:66143539-66143558 None:intergenic 50.0%
!! TTGATGGTGGCCATGCAGAA+AGG - chr5_4:66143973-66143992 None:intergenic 50.0%
ACATGTGGCTGTGGACTTGA+TGG - chr5_4:66143989-66144008 None:intergenic 50.0%
AGCTCATTCACATGTGGCTG+TGG - chr5_4:66143998-66144017 None:intergenic 50.0%
TTGAACGCGATCTCGAGTCA+TGG + chr5_4:66144038-66144057 Msa0865440:CDS 50.0%
TGTTTCAGTTCTGTGCAGGG+AGG + chr5_4:66144169-66144188 Msa0865440:intron 50.0%
TTTGTGGTTACTCCAGCCCA+TGG - chr5_4:66144385-66144404 None:intergenic 50.0%
GCATCCTGTCTACCTGTCAT+GGG + chr5_4:66144974-66144993 Msa0865440:CDS 50.0%
ATCTCCCATGACAGGTAGAC+AGG - chr5_4:66144981-66145000 None:intergenic 50.0%
GAGGAAACGAGAGAAGCAGA+TGG + chr5_4:66145227-66145246 Msa0865440:CDS 50.0%
GGCTGGTAAAGACCTCATGA+AGG - chr5_4:66145316-66145335 None:intergenic 50.0%
! TCGTGGATTGTGGGACAGAA+TGG + chr5_4:66145355-66145374 Msa0865440:CDS 50.0%
! CGTGGATTGTGGGACAGAAT+GGG + chr5_4:66145356-66145375 Msa0865440:CDS 50.0%
ATTGTGGGACAGAATGGGAC+AGG + chr5_4:66145361-66145380 Msa0865440:CDS 50.0%
TGGATCTTGCTACGCTCTTG+GGG + chr5_4:66145561-66145580 Msa0865440:CDS 50.0%
GGGAAAATTAGGGCCGCAAA+AGG + chr5_4:66146010-66146029 Msa0865440:three_prime_UTR 50.0%
! GCCATGGGAATAGCCTTTTG+CGG - chr5_4:66146026-66146045 None:intergenic 50.0%
! CTCAGTTAGAGGAGAGCGTG+TGG - chr5_4:66138394-66138413 None:intergenic 55.0%
CCGAAAGCGAGGTTACTACG+AGG - chr5_4:66138528-66138547 None:intergenic 55.0%
GTACTGCTGGAAGAGGGGTT+CGG + chr5_4:66138892-66138911 Msa0865440:CDS 55.0%
TGACTCAGCAGCAGGATAGG+AGG + chr5_4:66139042-66139061 Msa0865440:CDS 55.0%
AGCAGCAGGATAGGAGGTCT+TGG + chr5_4:66139048-66139067 Msa0865440:CDS 55.0%
ATGGGCAAGAGGCTGTACTG+AGG + chr5_4:66139962-66139981 Msa0865440:CDS 55.0%
! CTGGCTCTTCGAAGTGCCTT+TGG + chr5_4:66140011-66140030 Msa0865440:CDS 55.0%
! GCAGCAGAGAGAGCACATAC+AGG - chr5_4:66141404-66141423 None:intergenic 55.0%
! ACTGCAGAGTGCTCCTGTTG+TGG + chr5_4:66142065-66142084 Msa0865440:intron 55.0%
TTAGCCGCAAGTTTCGGGAG+TGG - chr5_4:66142143-66142162 None:intergenic 55.0%
ACTTGCGGCTAAATGGGCCA+TGG + chr5_4:66142151-66142170 Msa0865440:CDS 55.0%
AACTCCAACCAAGGACTGCC+TGG + chr5_4:66142387-66142406 Msa0865440:CDS 55.0%
AGCAGGATGTAAAGCTGGCG+CGG - chr5_4:66143139-66143158 None:intergenic 55.0%
TGTGGCTGTGGACTTGATGG+TGG - chr5_4:66143986-66144005 None:intergenic 55.0%
ATGACACAGGTTCCATGGGC+TGG + chr5_4:66144370-66144389 Msa0865440:intron 55.0%
GGCATCCTGTCTACCTGTCA+TGG + chr5_4:66144973-66144992 Msa0865440:CDS 55.0%
GCTTCAATCACTGAGCGAGG+AGG - chr5_4:66145794-66145813 None:intergenic 55.0%
CGAGCTTCAATCACTGAGCG+AGG - chr5_4:66145797-66145816 None:intergenic 55.0%
GCCGCAAAAGGCTATTCCCA+TGG + chr5_4:66146022-66146041 Msa0865440:three_prime_UTR 55.0%
TCATCGGTCTCAGCTGCAGC+AGG - chr5_4:66138609-66138628 None:intergenic 60.0%
TGCCTGCAAGCATGGGCAAG+AGG + chr5_4:66139951-66139970 Msa0865440:CDS 60.0%
AGCCTCTTGCCCATGCTTGC+AGG - chr5_4:66139956-66139975 None:intergenic 60.0%
AAGAGGCTGTACTGAGGCCC+CGG + chr5_4:66139968-66139987 Msa0865440:CDS 60.0%
AGGCAGTCCATGGTGAAGCC+AGG + chr5_4:66141351-66141370 Msa0865440:CDS 60.0%
AGCTCCAGGCAGTCCTTGGT+TGG - chr5_4:66142394-66142413 None:intergenic 60.0%
CACAAGCTCCAGGCAGTCCT+TGG - chr5_4:66142398-66142417 None:intergenic 60.0%
GGTCTCAGCTGCAGCAGGAC+AGG - chr5_4:66138604-66138623 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 66138077 66146249 66138077 ID=Msa0865440;Name=Msa0865440
chr5_4 mRNA 66138077 66146249 66138077 ID=Msa0865440-mRNA-1;Parent=Msa0865440;Name=Msa0865440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=62|1|0.95|1|1|1|21|372|1195
chr5_4 exon 66138077 66138186 66138077 ID=Msa0865440-mRNA-1:exon:20896;Parent=Msa0865440-mRNA-1
chr5_4 exon 66138357 66139156 66138357 ID=Msa0865440-mRNA-1:exon:20897;Parent=Msa0865440-mRNA-1
chr5_4 exon 66139421 66139492 66139421 ID=Msa0865440-mRNA-1:exon:20898;Parent=Msa0865440-mRNA-1
chr5_4 exon 66139890 66140033 66139890 ID=Msa0865440-mRNA-1:exon:20899;Parent=Msa0865440-mRNA-1
chr5_4 exon 66140128 66140246 66140128 ID=Msa0865440-mRNA-1:exon:20900;Parent=Msa0865440-mRNA-1
chr5_4 exon 66140458 66140622 66140458 ID=Msa0865440-mRNA-1:exon:20901;Parent=Msa0865440-mRNA-1
chr5_4 exon 66140773 66140878 66140773 ID=Msa0865440-mRNA-1:exon:20902;Parent=Msa0865440-mRNA-1
chr5_4 exon 66141298 66141403 66141298 ID=Msa0865440-mRNA-1:exon:20903;Parent=Msa0865440-mRNA-1
chr5_4 exon 66141506 66141616 66141506 ID=Msa0865440-mRNA-1:exon:20904;Parent=Msa0865440-mRNA-1
chr5_4 exon 66142072 66142235 66142072 ID=Msa0865440-mRNA-1:exon:20905;Parent=Msa0865440-mRNA-1
chr5_4 exon 66142360 66142477 66142360 ID=Msa0865440-mRNA-1:exon:20906;Parent=Msa0865440-mRNA-1
chr5_4 exon 66143006 66143230 66143006 ID=Msa0865440-mRNA-1:exon:20907;Parent=Msa0865440-mRNA-1
chr5_4 exon 66143445 66143653 66143445 ID=Msa0865440-mRNA-1:exon:20908;Parent=Msa0865440-mRNA-1
chr5_4 exon 66143901 66144068 66143901 ID=Msa0865440-mRNA-1:exon:20909;Parent=Msa0865440-mRNA-1
chr5_4 exon 66144177 66144282 66144177 ID=Msa0865440-mRNA-1:exon:20910;Parent=Msa0865440-mRNA-1
chr5_4 exon 66144379 66144516 66144379 ID=Msa0865440-mRNA-1:exon:20911;Parent=Msa0865440-mRNA-1
chr5_4 exon 66144640 66144798 66144640 ID=Msa0865440-mRNA-1:exon:20912;Parent=Msa0865440-mRNA-1
chr5_4 exon 66144896 66145099 66144896 ID=Msa0865440-mRNA-1:exon:20913;Parent=Msa0865440-mRNA-1
chr5_4 exon 66145188 66145382 66145188 ID=Msa0865440-mRNA-1:exon:20914;Parent=Msa0865440-mRNA-1
chr5_4 exon 66145511 66145582 66145511 ID=Msa0865440-mRNA-1:exon:20915;Parent=Msa0865440-mRNA-1
chr5_4 exon 66145719 66146249 66145719 ID=Msa0865440-mRNA-1:exon:20916;Parent=Msa0865440-mRNA-1
chr5_4 five_prime_UTR 66138077 66138138 66138077 ID=Msa0865440-mRNA-1:five_prime_utr;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66138139 66138186 66138139 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66138357 66139156 66138357 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66139421 66139492 66139421 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66139890 66140033 66139890 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66140128 66140246 66140128 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66140458 66140622 66140458 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66140773 66140878 66140773 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66141298 66141403 66141298 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66141506 66141616 66141506 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66142072 66142235 66142072 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66142360 66142477 66142360 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66143006 66143230 66143006 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66143445 66143653 66143445 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66143901 66144068 66143901 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66144177 66144282 66144177 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66144379 66144516 66144379 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66144640 66144798 66144640 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66144896 66145099 66144896 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66145188 66145382 66145188 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66145511 66145582 66145511 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 CDS 66145719 66145877 66145719 ID=Msa0865440-mRNA-1:cds;Parent=Msa0865440-mRNA-1
chr5_4 three_prime_UTR 66145878 66146249 66145878 ID=Msa0865440-mRNA-1:three_prime_utr;Parent=Msa0865440-mRNA-1
Gene Sequence

>Msa0865440

ATGTTTACAGAAGGATTGGATGAAACTGCACTCCAATGGATCAATAAGGGATCACAACAACAAGTACAAGTTGAAGAATGCACCACACGCTCTCCTCTAACTGAGAAAAAATCACCTCTTCCTAGATCACCTCTTTTCGCAACAACCCTTTCCAATAATAATCTCACTCCTAAATCTCCATCTTTACCTCCTTTAAAATTCAATTCTTCTTTGCTTCCTCGTAGTAACCTCGCTTTCGGATTCAACGATCACGATAGTGTCACTGATGATGATGAGAGTGTTGATTCATTGTCCTGTCCTGCTGCAGCTGAGACCGATGACGAAAACGAAGAAGATGAAAGAGTATTTGACAATTTAGATACTCCAATTGCACAATGCTATGATGAGGAACAGTTATTTGGATTTGGTAATGGAGTTAAACCTAAACCCCTAAAACCTAGTGGAATTTTGAGGAAGGGTTTGGTAAATGAAAATTTAACAATTCAAGTTCCTAATACTGTTAATTCTAGAAGATTTACTGATGGAGAGTTAGGTTTTAACAAATGTGTTCAGAAGAAAATGACTCCATGTGGAAGTGAAATTGGTACTGCTGGAAGAGGGGTTCGGTTTCAAAATACGACTAATTTGAATGATTCTGTTGATTTGGCTACACCAAGTGCTCCTCCTATATTTGTTGATGGTGAAGGTGATGTCAGTTATTCGGAAGGATCCGTGGCGAATCAAGTCGATGAAATGACTCAGCAGCAGGATAGGAGGTCTTGGCAATCTAGAGATTCTGTGAATTGTGATGATGGAGGAGGAATAAGTGAATGTTCAATTGAACAAATGCCTAATACTGTTGCTGAAAGTCAAGAAACAACCTCTACACAGGGCATAGAAAGACAGGCTCCTCCTCCACACTTGCAATATCTCAATAACAGCACTTGCAGTAGTCAAGATGCCTGGCAAACCCTTATCACTTACGACGCCTGCATTCGTCTATGCCTGCAAGCATGGGCAAGAGGCTGTACTGAGGCCCCGGAGTTTCTAAAAGATGAGTGTCTGGCTCTTCGAAGTGCCTTTGGGTTACATGAGTTCTTGTTGCAACCTCGAGGTATAAAGCCAACTGAAGGTAGTACAAGGAATTCAGAACAAACAGTGCCTCTCAAGACAAAGAAGGTTGTGGGGAAAATAAGAGTGGAAGTGAAGAAACTTCGTATTATACAAAGAAGAAAACTGAAGGGCACATTTTCAAACCGAGGATCAATGTATAAGCAAGTTGGGATGGAGTACGTCAGGCATGTTTCATCCCTTGTGAAAAGTGGTATACAGTCTATGAAGGCAGCATCACTCTCAGTGACAGAAGAAGAGCCAATGCATTGTTTGATCCAACTCAAGAGTGCAACAGAAGAAAATGAATCAGAGTCATGTTCGGCAATTTTTCTTCGCCCTGGAAGTGGAGATTATCATGATTTTTTCCCATTGAGCCAAGGGGATGCTTTATTGGTAGAAGTCCAAGATTCTAAGAAGGCAGTCCATGGTGAAGCCAGGATTCCAATTTCTTACCTTAATGATAATCCTAGTGACAGAATTCGGTGGTGGGAAATAAATCATGATGATAATGAATGTGTTGGCAAGATCCAGCTCTCAATTGGAAGTACAATGACAAGTGGTGACAACAATCATATAAAGAGTGCTCCTGTTGTGGAAACTCAAGCCTATGATATATTGTTGGAGGGTGCGATGCGTGCACAGCGTTTCCACTCCCGAAACTTGCGGCTAAATGGGCCATGGAAATGGTTGTTAGATGCATTTGCTGACTACTATGGAGTTTCCGATTCATATGCTAAATTGAGATATCTATTACAGGTCATGAATGTAGCAACTCCAACCAAGGACTGCCTGGAGCTTGTGAAAGAGTTACTTGATCCCCTAATGAAGGCCAGAAGTGAGAGAAGTCTGACTAGGCAAGAGAGAAGTATACTTTTGGATTGTGAAACACAAATTGAAAGACTACTAGCGACTGTTTTTGAGAATTACAAATCGCTTGATGAAAACTCGCCAACAGGTTTAACCGATCATTTTGGTCTAGCATCTCATTCAGCCGCGCCAGCTTTACATCCTGCTCTACAAGTCTACAGTAGTCTTCATGATATACTTTCTTCAGATGCTCAAACTATTCTACAGAACTATCTGCAGACTGCAGCAAGAAAAAGGTGTAGAAAACACATGATGGAGACTGATGAATTTGTGTCGGGTGCCTCAGAAAGTTACCAAATGGACAGCATTACCATCTCAACGGCATACCTGAAGATAAAAAACCTTTGTATTTCTATAAGAAATGAAATTCAGGCAGACATAAAGATCAACAACCATAATACAATCCATGGTCAGCATATTTTTCCCAGTTCAATTGACTTGGCAAACATCACAGCAGCCATTTATAGCACAGAGCTGTGTAAAAGGCTGAGAACTTTCCTTTCTGCATGGCCACCATCAAGTCCACAGCCACATGTGAATGAGCTTCTAGTGGCAACTGCAGACTTTGAACGCGATCTCGAGTCATGGAATATAAGTTCTGTGCAGGGAGGTGTAGACTCCAGAAATTTGTTTCACAATTACATCATGGTTTGGATACAAGATATGCAACTTATTTTGTTTGATCTTTGTAAAGCAGAAAAGGTTCCATGGGCTGGAGTAACCACAAATCATTCCACTTCACCATTTGCTGAGAAAATGTATGAGAACATTAAAGACAACTTAATCCAGTATGAAGTGGTAATCAATAGATGGCCTCAATACTCCTTGTATTTGGAAAATGCTGTGGCAAATATTGAAAGGGCAATTGTGAAATCGCTTGAAAAACAATACAGTGAGATCTTAACTCCTTTGAAAGATAGCATACCAAAGAGACTTCACTTGCAAGTTCAAAAGCTAGCAAGAAGACAATCAGCTACAGTTCAGTTGCTTCCTAACCAATTGGGTATATTCTTGAACACCATCAAGAGGATACTTGATGTCCTACATTGTAGAGTGGAAGACATCCTAAATTCATGGGCATCCTGTCTACCTGTCATGGGAGATAAGAAGTTGTTTGGAGAGCAAATGAATGGAATCACCGTGTTACTGAGAACCAGATACAAAACTTATTTGCAAGCAATAATAGGGAATCTTGTCAACAATATTCAAGGTAATAAGAGCACACGGCTGAAAAAGATGCTTGAGGAAACGAGAGAAGCAGATGGAGAAGCAGAAGTTCGTGAAAGGATGCAGTTGTTGAATTCACAACTCGCTGACTTCATCTCCAACCTTCATGAGGTCTTTACCAGCCAAATCTTCATAGCAATATGTCGTGGATTGTGGGACAGAATGGGACAGATTGTTTTGAAATTTCTAGAAGGGAGGAAAGAAAATAGAATATGGTACAATGGATCTTGCTACGCTCTTGGGATATTGGATGACACATTTGCTTCTCAGATGCAAAGATTAAGAGGAAATGCATTGCAAGAGAAAGATATTGAGCCTCCTCGCTCAGTGATTGAAGCTCGATCTATTCTTTGCAAAGACACAACAAATGCAGCTGATCCATCTACTTATTTCTACATATAG
Protein sequence

>Msa0865440

MFTEGLDETALQWINKGSQQQVQVEECTTRSPLTEKKSPLPRSPLFATTLSNNNLTPKSPSLPPLKFNSSLLPRSNLAFGFNDHDSVTDDDESVDSLSCPAAAETDDENEEDERVFDNLDTPIAQCYDEEQLFGFGNGVKPKPLKPSGILRKGLVNENLTIQVPNTVNSRRFTDGELGFNKCVQKKMTPCGSEIGTAGRGVRFQNTTNLNDSVDLATPSAPPIFVDGEGDVSYSEGSVANQVDEMTQQQDRRSWQSRDSVNCDDGGGISECSIEQMPNTVAESQETTSTQGIERQAPPPHLQYLNNSTCSSQDAWQTLITYDACIRLCLQAWARGCTEAPEFLKDECLALRSAFGLHEFLLQPRGIKPTEGSTRNSEQTVPLKTKKVVGKIRVEVKKLRIIQRRKLKGTFSNRGSMYKQVGMEYVRHVSSLVKSGIQSMKAASLSVTEEEPMHCLIQLKSATEENESESCSAIFLRPGSGDYHDFFPLSQGDALLVEVQDSKKAVHGEARIPISYLNDNPSDRIRWWEINHDDNECVGKIQLSIGSTMTSGDNNHIKSAPVVETQAYDILLEGAMRAQRFHSRNLRLNGPWKWLLDAFADYYGVSDSYAKLRYLLQVMNVATPTKDCLELVKELLDPLMKARSERSLTRQERSILLDCETQIERLLATVFENYKSLDENSPTGLTDHFGLASHSAAPALHPALQVYSSLHDILSSDAQTILQNYLQTAARKRCRKHMMETDEFVSGASESYQMDSITISTAYLKIKNLCISIRNEIQADIKINNHNTIHGQHIFPSSIDLANITAAIYSTELCKRLRTFLSAWPPSSPQPHVNELLVATADFERDLESWNISSVQGGVDSRNLFHNYIMVWIQDMQLILFDLCKAEKVPWAGVTTNHSTSPFAEKMYENIKDNLIQYEVVINRWPQYSLYLENAVANIERAIVKSLEKQYSEILTPLKDSIPKRLHLQVQKLARRQSATVQLLPNQLGIFLNTIKRILDVLHCRVEDILNSWASCLPVMGDKKLFGEQMNGITVLLRTRYKTYLQAIIGNLVNNIQGNKSTRLKKMLEETREADGEAEVRERMQLLNSQLADFISNLHEVFTSQIFIAICRGLWDRMGQIVLKFLEGRKENRIWYNGSCYALGILDDTFASQMQRLRGNALQEKDIEPPRSVIEARSILCKDTTNAADPSTYFYI*