AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0776880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776880 MtrunA17_Chr5g0432161 95.000 560 23 4 24 580 25 582 0.0 947
Msa0776880 MtrunA17_Chr3g0106491 55.245 572 161 21 36 579 3 507 8.49e-173 499
Msa0776880 MtrunA17_Chr7g0243891 48.162 544 222 17 59 579 35 541 1.00e-139 416
Msa0776880 MtrunA17_Chr4g0004911 48.276 406 150 14 82 480 47 399 3.65e-104 323
Msa0776880 MtrunA17_Chr3g0079691 42.060 466 189 8 81 481 110 559 6.09e-96 308
Msa0776880 MtrunA17_Chr3g0079691 54.118 85 37 2 417 500 280 363 8.03e-18 87.4
Msa0776880 MtrunA17_Chr3g0079691 48.315 89 42 3 226 311 479 566 3.52e-15 79.0
Msa0776880 MtrunA17_Chr5g0445311 41.463 451 187 12 60 481 26 428 1.08e-92 295
Msa0776880 MtrunA17_Chr5g0445311 50.649 77 24 2 417 493 200 262 3.44e-15 78.6
Msa0776880 MtrunA17_Chr7g0218081 40.329 486 211 13 36 494 53 486 3.84e-85 274
Msa0776880 MtrunA17_Chr3g0101131 57.422 256 78 7 237 479 240 477 8.08e-85 275
Msa0776880 MtrunA17_Chr3g0101131 42.056 107 47 3 417 523 243 334 1.11e-15 80.5
Msa0776880 MtrunA17_Chr5g0418191 51.504 266 110 7 226 486 137 388 6.02e-78 253
Msa0776880 MtrunA17_Chr5g0418191 45.745 94 47 3 220 310 298 390 4.22e-15 77.8
Msa0776880 MtrunA17_Chr7g0249311 49.825 285 97 4 236 479 175 454 2.53e-77 258
Msa0776880 MtrunA17_Chr7g0249311 59.701 67 26 1 417 483 179 244 6.90e-17 84.3
Msa0776880 MtrunA17_Chr7g0249311 46.078 102 44 4 240 331 392 492 1.28e-15 80.1
Msa0776880 MtrunA17_Chr7g0263531 48.828 256 104 7 232 476 181 420 2.89e-74 243
Msa0776880 MtrunA17_Chr7g0263531 28.931 159 87 4 164 298 264 420 9.05e-12 67.4
Msa0776880 MtrunA17_Chr4g0042831 48.617 253 83 6 235 486 140 346 1.06e-69 229
Msa0776880 MtrunA17_Chr5g0447701 43.028 251 126 4 230 480 82 315 6.80e-54 188
Msa0776880 MtrunA17_Chr4g0074001 39.841 251 127 6 239 479 185 421 1.23e-45 168
Msa0776880 MtrunA17_Chr7g0249301 80.488 82 16 0 398 479 273 354 5.65e-42 155
Msa0776880 MtrunA17_Chr7g0249301 65.278 72 25 0 241 312 63 134 1.39e-24 105
Msa0776880 MtrunA17_Chr7g0249301 47.222 108 50 5 416 519 61 165 3.37e-16 80.9
Msa0776880 MtrunA17_Chr7g0249301 58.065 62 21 2 240 298 292 351 2.62e-14 75.1
Msa0776880 MtrunA17_Chr5g0447711 33.594 256 138 5 227 480 68 293 1.50e-38 144
Msa0776880 MtrunA17_Chr5g0432071 49.324 148 68 4 203 349 70 211 2.36e-35 132
Msa0776880 MtrunA17_Chr5g0432071 50.000 78 35 2 417 491 104 180 8.87e-17 79.3
Msa0776880 MtrunA17_Chr8g0335811 60.870 92 34 1 382 473 121 210 2.01e-33 127
Msa0776880 MtrunA17_Chr8g0335811 39.831 118 58 3 181 295 103 210 1.39e-15 76.3
Msa0776880 MtrunA17_Chr1g0188941 67.089 79 26 0 398 476 32 110 2.39e-33 123
Msa0776880 MtrunA17_Chr1g0188941 55.000 60 26 1 240 298 51 110 6.42e-17 77.0
Msa0776880 MtrunA17_Chr3g0129361 66.216 74 25 0 400 473 127 200 1.08e-29 116
Msa0776880 MtrunA17_Chr3g0129361 56.140 57 24 1 240 295 144 200 1.25e-14 73.6
Msa0776880 MtrunA17_Chr8g0383351 65.333 75 25 1 400 473 142 216 2.55e-28 113
Msa0776880 MtrunA17_Chr8g0383351 56.140 57 24 1 240 295 160 216 8.57e-15 74.3
Msa0776880 MtrunA17_Chr4g0051881 47.581 124 51 2 374 483 122 245 1.04e-26 111
Msa0776880 MtrunA17_Chr4g0051881 56.522 69 29 1 240 307 178 246 2.78e-17 83.6
Msa0776880 MtrunA17_Chr2g0294231 62.338 77 29 0 401 477 187 263 3.46e-26 110
Msa0776880 MtrunA17_Chr2g0294231 54.412 68 30 1 240 306 203 270 3.79e-16 80.5
Msa0776880 MtrunA17_Chr1g0150801 60.526 76 29 1 398 473 84 158 5.75e-26 104
Msa0776880 MtrunA17_Chr1g0150801 51.515 66 31 1 232 296 94 159 1.67e-15 74.3
Msa0776880 MtrunA17_Chr7g0270191 52.747 91 43 0 401 491 129 219 7.58e-26 107
Msa0776880 MtrunA17_Chr7g0270191 37.383 107 61 2 212 312 112 218 2.54e-15 77.0
Msa0776880 MtrunA17_Chr1g0194481 53.846 91 42 0 401 491 142 232 8.88e-26 108
Msa0776880 MtrunA17_Chr1g0194481 41.053 95 50 2 214 302 127 221 1.28e-15 78.2
Msa0776880 MtrunA17_Chr8g0386241 47.059 102 54 0 392 493 78 179 2.93e-25 102
Msa0776880 MtrunA17_Chr8g0386241 56.897 58 24 1 240 296 103 160 5.81e-16 76.3
Msa0776880 MtrunA17_Chr5g0443131 60.759 79 30 1 403 480 143 221 5.99e-25 105
Msa0776880 MtrunA17_Chr5g0443131 52.239 67 31 1 240 305 157 223 7.81e-15 75.9
Msa0776880 MtrunA17_Chr5g0418781 54.878 82 37 0 392 473 99 180 9.01e-25 104
Msa0776880 MtrunA17_Chr5g0418781 57.895 57 23 1 240 295 124 180 1.05e-12 68.9
Msa0776880 MtrunA17_Chr7g0248721 53.333 90 41 1 384 473 108 196 9.40e-25 102
Msa0776880 MtrunA17_Chr7g0248721 50.000 66 31 2 232 296 133 197 2.80e-13 69.3
Msa0776880 MtrunA17_Chr7g0224801 54.321 81 37 0 408 488 84 164 1.20e-24 100
Msa0776880 MtrunA17_Chr7g0224801 50.794 63 30 1 240 301 93 155 1.27e-14 72.0
Msa0776880 MtrunA17_Chr4g0060271 45.946 111 52 3 370 476 209 315 4.09e-24 106
Msa0776880 MtrunA17_Chr4g0060271 52.459 61 27 2 240 298 255 315 2.05e-13 73.2
Msa0776880 MtrunA17_Chr2g0302391 49.020 102 50 2 379 478 172 273 6.81e-24 104
Msa0776880 MtrunA17_Chr2g0302391 39.535 86 45 3 234 312 200 285 2.28e-11 66.2
Msa0776880 MtrunA17_Chr3g0099641 47.727 88 45 1 390 476 224 311 7.71e-24 104
Msa0776880 MtrunA17_Chr3g0099641 38.824 85 50 2 241 323 252 336 5.24e-13 71.6
Msa0776880 MtrunA17_Chr4g0068541 58.442 77 32 0 401 477 192 268 8.90e-24 103
Msa0776880 MtrunA17_Chr4g0068541 53.125 64 29 1 240 302 208 271 1.49e-14 75.9
Msa0776880 MtrunA17_Chr4g0075201 52.381 84 39 1 396 478 246 329 5.50e-23 102
Msa0776880 MtrunA17_Chr4g0075201 50.820 61 28 2 240 298 267 327 3.25e-13 72.4
Msa0776880 MtrunA17_Chr3g0129321 54.667 75 34 0 403 477 104 178 7.01e-23 97.1
Msa0776880 MtrunA17_Chr3g0129321 53.333 60 27 1 240 298 118 177 5.17e-13 68.2
Msa0776880 MtrunA17_Chr2g0322391 52.381 84 39 1 396 478 328 411 8.82e-23 102
Msa0776880 MtrunA17_Chr2g0322391 38.554 83 49 2 240 320 349 431 1.32e-11 67.4
Msa0776880 MtrunA17_Chr2g0288871 53.165 79 36 1 399 476 287 365 9.89e-23 102
Msa0776880 MtrunA17_Chr2g0288871 51.667 60 27 2 241 298 306 365 1.08e-13 73.9
Msa0776880 MtrunA17_Chr8g0383251 53.425 73 34 0 404 476 95 167 1.16e-22 95.5
Msa0776880 MtrunA17_Chr8g0383251 53.333 60 27 1 240 298 108 167 3.23e-13 68.6
Msa0776880 MtrunA17_Chr7g0270831 48.837 86 43 1 401 485 200 285 1.47e-22 100
Msa0776880 MtrunA17_Chr7g0270831 51.667 60 27 2 241 298 217 276 2.30e-13 72.4
Msa0776880 MtrunA17_Chr4g0051181 53.165 79 36 1 401 478 227 305 1.50e-22 101
Msa0776880 MtrunA17_Chr4g0051181 55.000 60 25 2 241 298 244 303 2.90e-14 75.5
Msa0776880 MtrunA17_Chr7g0216891 55.000 80 31 2 395 473 201 276 6.12e-22 99.8
Msa0776880 MtrunA17_Chr7g0216891 52.542 59 26 2 240 296 219 277 1.78e-12 70.1
Msa0776880 MtrunA17_Chr1g0189391 47.959 98 47 2 377 473 60 154 2.05e-21 95.9
Msa0776880 MtrunA17_Chr1g0189391 51.724 58 26 2 240 295 97 154 3.94e-11 64.7
Msa0776880 MtrunA17_Chr4g0025061 46.237 93 49 1 387 478 330 422 4.51e-21 97.4
Msa0776880 MtrunA17_Chr4g0025061 42.466 73 40 2 241 311 361 433 5.94e-12 68.6
Msa0776880 MtrunA17_Chr4g0053281 51.765 85 37 2 398 481 250 331 5.78e-21 94.4
Msa0776880 MtrunA17_Chr4g0053281 50.877 57 26 2 241 295 267 323 8.89e-13 69.7
Msa0776880 MtrunA17_Chr4g0025051 37.879 132 81 1 347 477 265 396 9.36e-21 96.3
Msa0776880 MtrunA17_Chr4g0025051 39.726 73 42 2 241 311 336 408 6.73e-11 65.1
Msa0776880 MtrunA17_Chr1g0147881 56.098 82 32 2 398 478 246 324 1.36e-20 93.6
Msa0776880 MtrunA17_Chr1g0147881 54.386 57 24 2 241 295 263 319 7.86e-12 67.0
Msa0776880 MtrunA17_Chr7g0238921 36.735 147 76 3 417 546 124 270 4.08e-20 91.7
Msa0776880 MtrunA17_Chr7g0238921 63.158 57 20 1 240 295 124 180 8.43e-16 78.6
Msa0776880 MtrunA17_Chr6g0485431 49.398 83 41 1 395 476 132 214 8.48e-20 91.3
Msa0776880 MtrunA17_Chr6g0485431 37.168 113 53 5 238 332 152 264 1.24e-13 72.8
Msa0776880 MtrunA17_Chr3g0136961 53.425 73 31 3 404 473 123 195 2.27e-19 89.0
Msa0776880 MtrunA17_Chr3g0136961 32.418 182 91 8 153 321 66 228 5.16e-16 79.0
Msa0776880 MtrunA17_Chr5g0401821 51.899 79 37 1 398 475 180 258 4.22e-19 87.8
Msa0776880 MtrunA17_Chr5g0401821 50.877 57 26 2 241 295 200 256 2.17e-12 67.8
Msa0776880 MtrunA17_Chr6g0468181 68.519 54 17 0 256 309 18 71 4.71e-19 83.2
Msa0776880 MtrunA17_Chr1g0150271 50.794 63 30 1 415 476 99 161 1.40e-18 85.9
Msa0776880 MtrunA17_Chr1g0150271 38.889 90 45 3 229 308 82 171 4.20e-12 66.6
Msa0776880 MtrunA17_Chr4g0071521 48.276 87 44 1 397 482 225 311 1.47e-18 87.0
Msa0776880 MtrunA17_Chr4g0001361 43.396 106 49 4 387 487 137 236 1.58e-18 87.0
Msa0776880 MtrunA17_Chr4g0001361 53.333 60 26 2 241 298 163 222 3.01e-15 77.0
Msa0776880 MtrunA17_Chr2g0333851 54.688 64 28 1 415 477 167 230 2.94e-18 85.9
Msa0776880 MtrunA17_Chr2g0333851 51.667 60 27 2 241 298 170 229 4.79e-14 73.6
Msa0776880 MtrunA17_Chr1g0150281 41.935 93 47 4 387 473 106 197 4.75e-18 84.7
Msa0776880 MtrunA17_Chr1g0150281 50.877 57 26 2 241 295 141 197 1.44e-13 71.6
Msa0776880 MtrunA17_Chr7g0228941 49.351 77 36 2 398 473 35 109 1.63e-16 76.3
Msa0776880 MtrunA17_Chr3g0139021 48.718 78 39 1 398 474 295 372 1.67e-16 82.0
Msa0776880 MtrunA17_Chr1g0184691 49.351 77 38 1 398 473 274 350 3.14e-16 80.5
Msa0776880 MtrunA17_Chr1g0184691 52.542 59 26 2 241 297 294 352 1.24e-12 69.7
Msa0776880 MtrunA17_Chr4g0024391 39.785 93 55 1 387 478 199 291 6.10e-16 80.9
Msa0776880 MtrunA17_Chr2g0284321 52.381 63 29 1 418 479 36 98 2.27e-15 75.5
Msa0776880 MtrunA17_Chr2g0284321 48.333 60 29 2 241 298 36 95 3.22e-11 63.2
Msa0776880 MtrunA17_Chr8g0379461 40.000 90 51 2 418 504 77 166 2.58e-15 75.9
Msa0776880 MtrunA17_Chr8g0379461 38.710 93 49 4 241 331 77 163 1.41e-11 65.1
Msa0776880 MtrunA17_Chr2g0289181 53.226 62 28 1 418 478 15 76 2.73e-15 75.5
Msa0776880 MtrunA17_Chr2g0289181 56.667 60 24 2 241 298 15 74 2.50e-14 72.8
Msa0776880 MtrunA17_Chr7g0270051 34.513 113 61 2 390 489 14 126 7.97e-15 75.1
Msa0776880 MtrunA17_Chr7g0270051 53.333 60 26 2 241 298 54 113 1.06e-12 68.6
Msa0776880 MtrunA17_Chr1g0202461 38.947 95 56 2 398 491 243 336 1.36e-13 72.8
Msa0776880 MtrunA17_Chr1g0202461 47.945 73 34 3 239 309 260 330 5.31e-12 67.8
Msa0776880 MtrunA17_Chr8g0387501 49.296 71 32 3 241 309 130 198 2.86e-13 70.5
Msa0776880 MtrunA17_Chr8g0387501 43.243 74 41 1 416 488 128 201 4.22e-13 70.1
Msa0776880 MtrunA17_Chr2g0293481 37.190 121 66 3 380 498 238 350 3.29e-13 72.0
Msa0776880 MtrunA17_Chr5g0419241 54.167 48 22 0 396 443 56 103 3.84e-13 65.9
Msa0776880 MtrunA17_Chr2g0319961 47.619 63 32 1 418 479 81 143 4.07e-13 69.7
Msa0776880 MtrunA17_Chr8g0348311 46.154 78 40 2 418 494 156 232 1.28e-12 69.3
Msa0776880 MtrunA17_Chr3g0126391 45.588 68 33 2 230 293 123 190 1.77e-12 68.9
Msa0776880 MtrunA17_Chr3g0126391 50.847 59 26 1 416 471 132 190 4.82e-12 67.8
Msa0776880 MtrunA17_Chr1g0188961 58.824 51 20 1 437 487 3 52 1.97e-12 62.8
Msa0776880 MtrunA17_Chr8g0387981 51.724 58 24 2 240 293 132 189 2.28e-12 68.9
Msa0776880 MtrunA17_Chr8g0387981 32.308 130 60 3 417 543 132 236 2.44e-11 65.5
Msa0776880 MtrunA17_Chr7g0248691 47.692 65 33 1 418 481 155 219 5.00e-12 67.4
Msa0776880 MtrunA17_Chr4g0009881 50.847 59 28 1 241 299 18 75 1.97e-11 61.2
Msa0776880 MtrunA17_Chr8g0347251 42.254 71 32 3 240 306 136 201 5.75e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776880 AT2G38470.1 57.022 356 122 12 237 579 181 518 2.39e-108 335
Msa0776880 AT4G26640.7 41.784 426 210 9 77 486 7 410 3.17e-92 293
Msa0776880 AT2G03340.1 44.394 437 188 14 61 496 108 490 5.10e-92 292
Msa0776880 AT4G26640.2 41.784 426 210 9 77 486 47 450 1.07e-91 293
Msa0776880 AT2G30250.1 43.376 468 159 15 36 478 3 389 1.39e-88 280
Msa0776880 AT2G30250.1 48.780 82 39 2 226 304 312 393 6.87e-16 80.5
Msa0776880 AT4G26640.5 54.826 259 98 5 234 486 29 274 3.78e-86 273
Msa0776880 AT4G26640.6 54.826 259 98 5 234 486 29 274 3.78e-86 273
Msa0776880 AT4G26640.4 54.826 259 98 5 234 486 29 274 3.78e-86 273
Msa0776880 AT4G26640.3 54.826 259 98 5 234 486 29 274 3.78e-86 273
Msa0776880 AT4G26640.1 55.212 259 97 5 234 486 133 378 2.31e-85 274
Msa0776880 AT1G13960.1 41.492 429 175 10 61 476 103 468 8.11e-84 271
Msa0776880 AT5G07100.2 57.851 242 40 5 239 479 23 203 2.08e-83 259
Msa0776880 AT5G07100.2 50.000 78 36 2 224 298 123 200 4.16e-15 75.1
Msa0776880 AT5G07100.4 57.851 242 40 5 239 479 23 203 2.08e-83 259
Msa0776880 AT5G07100.4 50.000 78 36 2 224 298 123 200 4.16e-15 75.1
Msa0776880 AT5G07100.5 57.851 242 40 5 239 479 23 203 2.08e-83 259
Msa0776880 AT5G07100.5 50.000 78 36 2 224 298 123 200 4.16e-15 75.1
Msa0776880 AT5G07100.3 57.851 242 40 5 239 479 23 203 2.08e-83 259
Msa0776880 AT5G07100.3 50.000 78 36 2 224 298 123 200 4.16e-15 75.1
Msa0776880 AT5G07100.1 57.377 244 42 5 237 479 114 296 3.23e-83 263
Msa0776880 AT5G07100.1 35.906 298 122 13 58 298 8 293 2.45e-29 118
Msa0776880 AT5G07100.1 44.706 85 36 1 403 476 92 176 5.28e-16 79.7
Msa0776880 AT1G13960.2 47.797 295 129 4 197 476 31 315 1.31e-78 253
Msa0776880 AT4G26440.1 48.822 297 108 6 239 495 177 469 3.75e-75 249
Msa0776880 AT3G01080.2 51.261 238 78 4 239 476 204 403 1.89e-70 234
Msa0776880 AT3G01080.2 59.091 66 26 1 417 482 205 269 3.30e-17 85.1
Msa0776880 AT3G01080.2 47.674 86 42 2 216 298 318 403 1.14e-16 83.2
Msa0776880 AT3G01080.1 51.261 238 78 4 239 476 166 365 2.76e-70 233
Msa0776880 AT3G01080.1 59.091 66 26 1 417 482 167 231 3.59e-17 84.7
Msa0776880 AT3G01080.1 47.674 86 42 2 216 298 280 365 1.24e-16 82.8
Msa0776880 AT2G04880.2 45.935 246 116 4 240 479 111 345 1.17e-62 214
Msa0776880 AT2G04880.2 54.688 64 28 1 415 478 109 171 2.23e-16 82.4
Msa0776880 AT2G04880.2 55.882 68 29 1 232 298 275 342 6.10e-16 80.9
Msa0776880 AT2G37260.3 47.059 272 95 7 232 475 77 327 1.31e-62 210
Msa0776880 AT2G04880.1 44.195 267 114 6 240 479 111 369 1.54e-62 214
Msa0776880 AT2G04880.1 54.688 64 28 1 415 478 109 171 2.34e-16 82.4
Msa0776880 AT2G04880.1 55.882 68 29 1 232 298 299 366 5.89e-16 81.3
Msa0776880 AT2G37260.2 47.059 272 95 7 232 475 75 325 1.58e-62 210
Msa0776880 AT2G37260.1 47.059 272 95 7 232 475 157 407 1.01e-61 210
Msa0776880 AT4G30935.1 42.194 237 123 5 241 477 169 391 7.27e-48 174
Msa0776880 AT4G30935.1 50.000 70 34 1 241 309 332 401 3.09e-15 79.0
Msa0776880 AT5G56270.1 78.431 102 20 1 378 479 450 549 4.75e-47 176
Msa0776880 AT5G56270.1 39.462 223 125 4 88 303 117 336 1.84e-30 127
Msa0776880 AT5G56270.1 60.000 60 23 1 417 476 273 331 1.63e-15 80.5
Msa0776880 AT5G56270.1 52.632 76 33 2 226 298 471 546 1.69e-15 80.5
Msa0776880 AT4G12020.10 47.143 210 104 4 229 437 458 661 1.95e-45 173
Msa0776880 AT4G12020.10 50.820 61 29 1 416 476 467 526 7.72e-12 69.3
Msa0776880 AT4G12020.3 47.143 210 104 4 229 437 458 661 2.20e-45 173
Msa0776880 AT4G12020.3 50.820 61 29 1 416 476 467 526 7.66e-12 69.3
Msa0776880 AT4G12020.1 47.143 210 104 4 229 437 458 661 2.20e-45 173
Msa0776880 AT4G12020.1 50.820 61 29 1 416 476 467 526 7.74e-12 69.3
Msa0776880 AT4G12020.9 47.143 210 104 4 229 437 458 661 2.20e-45 173
Msa0776880 AT4G12020.9 50.820 61 29 1 416 476 467 526 7.74e-12 69.3
Msa0776880 AT4G12020.2 47.143 210 104 4 229 437 458 661 2.25e-45 173
Msa0776880 AT4G12020.2 50.820 61 29 1 416 476 467 526 7.74e-12 69.3
Msa0776880 AT4G12020.7 47.143 210 104 4 229 437 458 661 2.48e-45 173
Msa0776880 AT4G12020.7 50.820 61 29 1 416 476 467 526 7.80e-12 69.3
Msa0776880 AT4G12020.4 47.143 210 104 4 229 437 458 661 2.60e-45 173
Msa0776880 AT4G12020.4 50.820 61 29 1 416 476 467 526 7.87e-12 69.3
Msa0776880 AT4G12020.6 47.143 210 104 4 229 437 458 661 2.71e-45 173
Msa0776880 AT4G12020.6 50.820 61 29 1 416 476 467 526 7.91e-12 69.3
Msa0776880 AT4G12020.8 47.143 210 104 4 229 437 458 661 2.71e-45 173
Msa0776880 AT4G12020.8 50.820 61 29 1 416 476 467 526 7.91e-12 69.3
Msa0776880 AT4G12020.5 47.143 210 104 4 229 437 391 594 2.79e-45 173
Msa0776880 AT4G12020.5 50.820 61 29 1 416 476 400 459 8.59e-12 68.9
Msa0776880 AT4G12020.11 47.143 210 104 4 229 437 458 661 5.26e-45 172
Msa0776880 AT4G12020.11 50.820 61 29 1 416 476 467 526 1.00e-11 68.6
Msa0776880 AT2G44745.1 60.215 93 36 1 382 473 109 201 1.17e-33 128
Msa0776880 AT2G44745.1 59.649 57 22 1 240 295 145 201 1.70e-15 76.3
Msa0776880 AT4G39410.1 64.474 76 27 0 398 473 204 279 4.51e-28 114
Msa0776880 AT4G39410.1 46.575 73 36 2 226 295 207 279 2.38e-13 71.6
Msa0776880 AT1G55600.1 60.241 83 33 0 396 478 286 368 8.29e-28 117
Msa0776880 AT1G55600.1 57.627 59 24 1 241 298 308 366 4.29e-15 78.6
Msa0776880 AT1G29860.1 51.376 109 42 2 384 481 93 201 1.11e-26 110
Msa0776880 AT1G29860.1 50.667 75 35 2 240 313 136 209 4.64e-16 79.3
Msa0776880 AT4G18170.1 56.322 87 38 0 390 476 145 231 1.83e-26 110
Msa0776880 AT4G18170.1 39.286 140 82 3 240 377 172 310 2.07e-15 78.2
Msa0776880 AT3G01080.3 70.312 64 19 0 239 302 204 267 4.72e-26 109
Msa0776880 AT3G01080.3 59.091 66 26 1 417 482 205 269 8.59e-18 85.1
Msa0776880 AT1G69310.4 60.256 78 31 0 396 473 126 203 6.15e-26 108
Msa0776880 AT1G69310.4 54.386 57 25 1 240 295 147 203 1.43e-12 68.9
Msa0776880 AT1G69310.2 60.256 78 31 0 396 473 126 203 6.15e-26 108
Msa0776880 AT1G69310.2 54.386 57 25 1 240 295 147 203 1.43e-12 68.9
Msa0776880 AT1G69310.1 60.256 78 31 0 396 473 126 203 6.15e-26 108
Msa0776880 AT1G69310.1 54.386 57 25 1 240 295 147 203 1.43e-12 68.9
Msa0776880 AT1G64000.1 59.211 76 31 0 398 473 95 170 1.61e-25 104
Msa0776880 AT1G64000.1 56.897 58 24 1 240 296 114 171 7.47e-16 76.6
Msa0776880 AT5G41570.1 59.211 76 31 0 398 473 79 154 1.71e-25 103
Msa0776880 AT5G41570.1 56.897 58 24 1 240 296 98 155 1.77e-15 75.1
Msa0776880 AT5G13080.1 59.722 72 29 0 404 475 54 125 7.52e-25 100
Msa0776880 AT5G13080.1 52.381 63 29 1 240 301 67 129 2.74e-16 76.6
Msa0776880 AT5G26170.1 58.571 70 29 0 404 473 100 169 9.59e-25 101
Msa0776880 AT5G26170.1 54.386 57 25 1 240 295 113 169 1.72e-14 72.4
Msa0776880 AT5G49520.1 61.728 81 30 1 401 480 205 285 1.02e-24 107
Msa0776880 AT5G49520.1 54.688 64 28 1 240 302 221 284 6.69e-15 77.4
Msa0776880 AT5G46350.1 52.688 93 44 0 403 495 169 261 1.37e-24 105
Msa0776880 AT5G46350.1 51.389 72 34 1 232 302 175 246 2.92e-14 74.7
Msa0776880 AT2G46130.1 53.571 84 39 0 390 473 3 86 2.52e-24 98.2
Msa0776880 AT2G46130.1 60.345 58 22 1 240 296 30 87 7.74e-17 77.0
Msa0776880 AT2G47260.1 59.211 76 31 0 401 476 158 233 3.24e-24 104
Msa0776880 AT2G47260.1 53.125 64 29 1 240 302 174 237 5.72e-14 73.9
Msa0776880 AT1G62300.1 42.657 143 68 5 348 476 230 372 3.33e-24 107
Msa0776880 AT1G62300.1 51.667 60 27 2 241 298 313 372 7.32e-13 71.6
Msa0776880 AT4G04450.2 52.809 89 41 1 391 478 172 260 5.79e-24 105
Msa0776880 AT4G04450.2 45.205 73 38 2 241 311 199 271 2.06e-13 73.2
Msa0776880 AT3G01970.1 62.500 72 27 0 404 475 52 123 6.23e-24 98.6
Msa0776880 AT3G01970.1 56.897 58 22 2 240 295 65 121 1.31e-12 66.2
Msa0776880 AT5G15130.2 33.500 200 113 6 294 476 49 245 1.12e-23 105
Msa0776880 AT5G15130.2 44.595 74 39 2 240 311 185 258 4.44e-12 68.9
Msa0776880 AT5G64810.1 57.746 71 30 0 404 474 97 167 1.49e-23 99.0
Msa0776880 AT5G64810.1 50.877 57 27 1 240 295 110 166 1.56e-12 67.0
Msa0776880 AT5G15130.1 53.846 78 35 1 400 476 210 287 1.52e-23 105
Msa0776880 AT5G15130.1 44.595 74 39 2 240 311 227 300 4.42e-12 69.3
Msa0776880 AT4G04450.1 52.809 89 41 1 391 478 266 354 2.74e-23 104
Msa0776880 AT4G04450.1 45.205 73 38 2 241 311 293 365 3.19e-13 72.8
Msa0776880 AT4G22070.4 51.724 87 41 1 391 476 271 357 7.84e-23 102
Msa0776880 AT4G22070.4 51.667 60 27 2 241 298 298 357 6.81e-13 71.6
Msa0776880 AT4G22070.3 51.724 87 41 1 391 476 271 357 7.84e-23 102
Msa0776880 AT4G22070.3 51.667 60 27 2 241 298 298 357 6.81e-13 71.6
Msa0776880 AT4G22070.2 51.724 87 41 1 391 476 271 357 7.84e-23 102
Msa0776880 AT4G22070.2 51.667 60 27 2 241 298 298 357 6.81e-13 71.6
Msa0776880 AT4G22070.1 51.724 87 41 1 391 476 271 357 7.84e-23 102
Msa0776880 AT4G22070.1 51.667 60 27 2 241 298 298 357 6.81e-13 71.6
Msa0776880 AT1G68150.1 53.165 79 36 1 401 478 219 297 1.79e-22 100
Msa0776880 AT1G68150.1 55.000 60 25 2 241 298 236 295 1.62e-14 75.9
Msa0776880 AT1G18860.1 52.564 78 36 1 400 476 222 299 1.45e-21 99.0
Msa0776880 AT1G18860.1 52.459 61 27 2 240 298 239 299 2.04e-12 70.1
Msa0776880 AT1G69310.3 56.410 78 30 1 396 473 126 199 2.87e-21 94.7
Msa0776880 AT3G62340.1 47.525 101 43 1 401 501 102 192 7.04e-21 93.6
Msa0776880 AT3G62340.1 51.351 74 34 2 240 311 118 191 2.70e-14 73.9
Msa0776880 AT4G01720.1 54.545 77 34 1 401 476 223 299 1.14e-20 95.9
Msa0776880 AT4G01720.1 37.963 108 59 4 199 298 192 299 1.61e-12 70.5
Msa0776880 AT2G46130.2 50.000 84 38 1 390 473 3 82 9.95e-20 85.1
Msa0776880 AT2G46130.2 55.172 58 21 2 240 296 30 83 2.46e-12 63.9
Msa0776880 AT4G31550.1 55.128 78 31 2 398 474 230 304 1.38e-19 90.5
Msa0776880 AT4G31550.1 49.333 75 36 2 241 313 247 321 9.09e-14 73.2
Msa0776880 AT4G31550.2 55.128 78 31 2 398 474 229 303 1.46e-19 90.5
Msa0776880 AT4G31550.2 49.333 75 36 2 241 313 246 320 9.34e-14 73.2
Msa0776880 AT2G21900.1 50.000 76 35 1 406 478 95 170 1.51e-19 87.8
Msa0776880 AT2G21900.1 47.761 67 34 1 240 305 109 175 8.32e-14 70.9
Msa0776880 AT2G24570.1 57.143 77 29 2 398 473 227 300 1.83e-19 90.1
Msa0776880 AT2G24570.1 54.386 57 24 2 241 295 244 300 4.84e-13 70.9
Msa0776880 AT4G24240.1 52.500 80 37 1 397 475 261 340 1.96e-19 90.5
Msa0776880 AT2G23320.1 50.633 79 35 2 398 475 224 299 2.01e-19 90.1
Msa0776880 AT2G23320.1 54.386 57 24 2 241 295 241 297 1.87e-12 68.9
Msa0776880 AT4G31800.2 50.704 71 33 2 410 478 103 173 1.60e-18 85.9
Msa0776880 AT4G31800.2 33.607 122 77 4 205 324 77 196 4.18e-15 75.9
Msa0776880 AT1G80840.1 51.562 64 30 1 415 477 144 207 2.46e-18 86.3
Msa0776880 AT1G80840.1 55.000 60 25 2 241 298 147 206 2.12e-14 74.7
Msa0776880 AT4G31800.1 50.704 71 33 2 410 478 168 238 3.23e-18 86.3
Msa0776880 AT4G31800.1 33.607 122 77 4 205 324 142 261 6.67e-15 76.3
Msa0776880 AT5G28650.1 50.649 77 37 1 398 473 243 319 1.42e-17 84.7
Msa0776880 AT5G28650.1 54.237 59 25 2 241 297 263 321 1.47e-12 69.7
Msa0776880 AT5G43290.1 43.434 99 38 2 393 473 72 170 1.58e-17 83.6
Msa0776880 AT5G43290.1 63.793 58 20 1 239 295 113 170 5.62e-16 79.0
Msa0776880 AT2G25000.2 50.000 64 31 1 416 478 102 165 1.76e-17 82.4
Msa0776880 AT2G25000.2 41.667 84 45 3 241 322 104 185 8.77e-13 68.6
Msa0776880 AT2G25000.4 50.000 64 31 1 416 478 102 165 1.76e-17 82.4
Msa0776880 AT2G25000.4 41.667 84 45 3 241 322 104 185 8.77e-13 68.6
Msa0776880 AT2G25000.3 50.000 64 31 1 416 478 124 187 3.52e-17 82.0
Msa0776880 AT2G25000.3 41.667 84 45 3 241 322 126 207 1.18e-12 68.6
Msa0776880 AT3G04670.1 50.649 77 37 1 398 473 243 319 3.94e-17 83.2
Msa0776880 AT3G04670.1 52.542 59 26 2 241 297 263 321 1.78e-12 69.3
Msa0776880 AT2G25000.1 50.000 64 31 1 416 478 145 208 5.25e-17 82.0
Msa0776880 AT2G25000.1 41.667 84 45 3 241 322 147 228 1.95e-12 68.2
Msa0776880 AT1G69810.2 46.835 79 40 2 400 476 128 206 6.78e-17 82.8
Msa0776880 AT2G30590.1 51.948 77 36 1 398 473 294 370 7.09e-17 83.2
Msa0776880 AT2G30590.1 55.932 59 24 2 241 297 314 372 3.58e-13 72.0
Msa0776880 AT1G69810.1 46.835 79 40 2 400 476 186 264 9.61e-17 82.8
Msa0776880 AT4G23550.1 44.156 77 42 1 406 481 129 205 4.88e-15 76.6
Msa0776880 AT5G52830.1 40.404 99 56 3 398 494 147 244 1.13e-13 73.2
Msa0776880 AT5G52830.1 44.048 84 43 3 239 320 164 245 1.37e-12 69.7
Msa0776880 AT1G29280.1 50.000 60 29 1 418 476 75 134 1.21e-13 71.6
Msa0776880 AT1G29280.1 50.000 60 28 2 241 298 75 134 3.28e-11 64.3
Msa0776880 AT4G01250.1 50.769 65 31 1 418 481 129 193 1.40e-13 72.0
Msa0776880 AT5G24110.1 38.182 110 51 3 231 336 104 200 4.52e-13 70.9
Msa0776880 AT2G40740.1 36.283 113 52 4 364 472 135 231 1.21e-12 69.3
Msa0776880 AT2G40740.1 33.884 121 66 6 240 355 173 284 9.79e-12 66.6
Msa0776880 AT3G58710.1 48.387 62 31 1 418 478 72 133 1.43e-12 68.9
Msa0776880 AT3G58710.1 42.105 76 42 2 241 314 72 147 4.43e-11 64.3
Msa0776880 AT3G58710.2 48.387 62 31 1 418 478 71 132 1.56e-12 68.6
Msa0776880 AT3G58710.2 42.105 76 42 2 241 314 71 146 4.76e-11 64.3
Msa0776880 AT2G40740.3 36.607 112 51 4 364 471 144 239 1.62e-12 68.9
Msa0776880 AT2G40740.3 33.884 121 66 6 240 355 182 293 1.31e-11 66.2
Msa0776880 AT2G34830.2 37.624 101 54 2 380 479 195 287 2.74e-12 69.3
Msa0776880 AT2G34830.1 37.624 101 54 2 380 479 186 278 2.97e-12 69.3
Msa0776880 AT1G30650.1 37.624 101 54 2 380 479 188 280 3.78e-12 68.9
Msa0776880 AT4G23810.1 45.588 68 33 2 231 294 149 216 5.58e-11 64.7
Msa0776880 AT4G11070.2 45.588 68 31 3 231 293 100 166 6.08e-11 63.9
Msa0776880 AT2G46400.1 42.308 78 38 3 240 310 104 181 7.23e-11 63.9
Msa0776880 AT5G45050.4 46.154 65 34 1 418 481 1042 1106 7.24e-11 65.9
Msa0776880 AT5G45050.1 46.154 65 34 1 418 481 1181 1245 7.76e-11 65.9
Msa0776880 AT4G11070.1 45.588 68 31 3 231 293 132 198 8.07e-11 63.9
Msa0776880 AT5G45050.2 46.154 65 34 1 418 481 1153 1217 8.20e-11 65.9

Find 163 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGGAAGGTTGGAAATTT+TGG 0.123460 5_2:-55566549 Msa0776880:three_prime_UTR
TTGCTGTGGTTGCTGGTAAT+TGG 0.244026 5_2:+55568521 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5_2:-55568340 Msa0776880:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5_2:+55566613 None:intergenic
TGCTTCCTCACTGGACAGTT+GGG 0.290571 5_2:+55566985 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.295221 5_2:-55568465 Msa0776880:CDS
GAGTGGGTTGCTGTGGTTGC+TGG 0.297812 5_2:+55568514 None:intergenic
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5_2:+55566829 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.301577 5_2:-55566661 Msa0776880:CDS
AACGTGCCTCACATGATTTA+AGG 0.307899 5_2:-55566957 Msa0776880:CDS
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5_2:+55568387 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5_2:-55566739 Msa0776880:CDS
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5_2:+55567719 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5_2:+55569952 None:intergenic
CATTAGTTTGTGGCTTCTCT+TGG 0.329118 5_2:-55566349 Msa0776880:three_prime_UTR
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5_2:+55566749 None:intergenic
CTCCTTGTACATTGAGGCTT+AGG 0.340959 5_2:+55568303 None:intergenic
GGCTTCTCTTGGCTTTAGTT+AGG 0.341641 5_2:-55566338 Msa0776880:three_prime_UTR
GGTTACAGATGGAGGAAATA+TGG 0.355775 5_2:-55567647 Msa0776880:CDS
TGTATCCATCGTCGGATCTT+CGG 0.356795 5_2:+55568481 None:intergenic
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5_2:-55569281 Msa0776880:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5_2:+55566810 None:intergenic
TGATCATGGATTTCGTTAAT+CGG 0.366115 5_2:+55568234 None:intergenic
GTTTCATGTTGTCAAAGGTT+TGG 0.373131 5_2:+55566139 None:intergenic
TTAATCATTTGTGGGTTGAT+TGG 0.376583 5_2:-55566300 Msa0776880:three_prime_UTR
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5_2:+55569886 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5_2:+55566847 None:intergenic
TTGGCATGTGCGATCAAGAT+TGG 0.381138 5_2:-55566261 Msa0776880:three_prime_UTR
TGGATGTAGTTATCCGCATT+TGG 0.387927 5_2:-55566280 Msa0776880:three_prime_UTR
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5_2:+55566838 None:intergenic
ATATGGACAGAAAGTTGTTA+AGG 0.405032 5_2:-55567630 Msa0776880:CDS
TTCAGCAAAGCAAAGATTCA+AGG 0.408387 5_2:+55566596 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5_2:-55569937 Msa0776880:CDS
CATAAGAAAGAGAAGAGAAA+AGG 0.414080 5_2:+55570200 None:intergenic
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5_2:+55568378 None:intergenic
ATCGTCGGATCTTCGGCTTA+AGG 0.424454 5_2:+55568488 None:intergenic
GAGAATTCTTCAATATCAAT+AGG 0.435077 5_2:-55568162 Msa0776880:CDS
TATACAGGATGGGTTTGGTT+TGG 0.435210 5_2:-55566427 Msa0776880:three_prime_UTR
GGCTGTGATCACAACTTATG+AGG 0.435418 5_2:-55566935 Msa0776880:CDS
TAACAGCAGCAGGCCCTTGT+TGG 0.436769 5_2:+55569202 None:intergenic
CTTGTAAAGTTTATACAGGA+TGG 0.438119 5_2:-55566438 Msa0776880:three_prime_UTR
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5_2:-55568448 Msa0776880:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5_2:+55569300 None:intergenic
TTAGTAGATACATGGAAGGT+TGG 0.446487 5_2:-55566558 Msa0776880:three_prime_UTR
ATTTCGTTAATCGGATCAAC+AGG 0.446654 5_2:+55568243 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5_2:+55569979 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5_2:+55569976 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5_2:-55566895 Msa0776880:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5_2:+55569907 None:intergenic
ATGCTTCCTCACTGGACAGT+TGG 0.456630 5_2:+55566984 None:intergenic
CTCGAGGTTTGATAATCAAA+TGG 0.457926 5_2:-55566713 Msa0776880:CDS
TGCTGCTGTTGATTCATGTA+AGG 0.458224 5_2:+55566688 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5_2:-55570029 Msa0776880:CDS
GCTTCATATTTAATCATTTG+TGG 0.459514 5_2:-55566309 Msa0776880:three_prime_UTR
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5_2:-55568447 Msa0776880:CDS
AAATCCATTGTTAGTGATGT+TGG 0.462800 5_2:+55568557 None:intergenic
GTTACTGAGATAGTTTATAA+GGG 0.464337 5_2:-55568339 Msa0776880:CDS
AACAGCAGCAGGCCCTTGTT+GGG 0.465165 5_2:+55569203 None:intergenic
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5_2:+55566892 None:intergenic
CTTCATATTTAATCATTTGT+GGG 0.465775 5_2:-55566308 Msa0776880:three_prime_UTR
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5_2:-55566755 Msa0776880:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5_2:-55566956 Msa0776880:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5_2:-55568367 Msa0776880:CDS
AAGTTTATACAGGATGGGTT+TGG 0.467623 5_2:-55566432 Msa0776880:three_prime_UTR
CACCACCAGATCGACTCCTT+TGG 0.467879 5_2:+55568109 None:intergenic
GAGAAAGTTGTTGACATGAA+AGG 0.468026 5_2:+55570084 None:intergenic
AACAAGTGACATTGATATCC+TGG 0.470742 5_2:-55567675 Msa0776880:CDS
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5_2:+55569943 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.472866 5_2:+55568165 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5_2:+55566853 None:intergenic
AGAAAGTTGTTGACATGAAA+GGG 0.475176 5_2:+55570085 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5_2:+55568388 None:intergenic
TCGAGAATCCATAATTTCCT+TGG 0.477194 5_2:+55566731 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5_2:+55566869 None:intergenic
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5_2:+55566976 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5_2:-55569162 Msa0776880:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5_2:-55566825 Msa0776880:CDS
GTTGTTTGAACTACAACTCT+AGG 0.489856 5_2:+55567695 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.490445 5_2:-55567629 Msa0776880:CDS
GCAGCAGCAACAACAACAAA+TGG 0.490866 5_2:-55566671 Msa0776880:CDS
ATTTGGTTTCATGTTGTCAA+AGG 0.496915 5_2:+55566134 None:intergenic
TGACCTTGAGGTGCTTGTTG+TGG 0.507463 5_2:+55566784 None:intergenic
GTTTGAACACTAGCAATCTC+AGG 0.510377 5_2:+55568579 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.512302 5_2:+55566633 None:intergenic
CTTCGGCTTAAGGTTTGAGT+GGG 0.513445 5_2:+55568498 None:intergenic
GATCCGACGATGGATACAAT+TGG 0.516722 5_2:-55568476 Msa0776880:CDS
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5_2:+55566839 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5_2:+55566757 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5_2:-55568210 Msa0776880:CDS
ATAAGAAAGAGAAGAGAAAA+GGG 0.518787 5_2:+55570201 None:intergenic
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5_2:-55566748 Msa0776880:CDS
GTGATGCATATGATTGATCA+TGG 0.523389 5_2:+55568220 None:intergenic
CACGAGCAGCGGGGACATCA+TGG 0.524422 5_2:+55566902 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5_2:-55568105 Msa0776880:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5_2:-55568202 Msa0776880:CDS
TTTGATGTTGAGAAATGGAA+GGG 0.527284 5_2:+55570261 None:intergenic
TTGTAAAGTTTATACAGGAT+GGG 0.534317 5_2:-55566437 Msa0776880:three_prime_UTR
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5_2:-55568114 Msa0776880:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5_2:+55567657 None:intergenic
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5_2:-55568366 Msa0776880:CDS
ATCCTAAGCCTCAATGTACA+AGG 0.543388 5_2:-55568305 Msa0776880:CDS
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5_2:+55569192 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5_2:-55566901 Msa0776880:CDS
CCGTCTGTCTTGATCTTGAT+CGG 0.554098 5_2:-55566167 Msa0776880:three_prime_UTR
AAGGTTTGAGTGGGTTGCTG+TGG 0.556153 5_2:+55568507 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5_2:+55569919 None:intergenic
TCGCCAATTGTATCCATCGT+CGG 0.560621 5_2:+55568473 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5_2:+55569980 None:intergenic
TCTTCGGCTTAAGGTTTGAG+TGG 0.561695 5_2:+55568497 None:intergenic
GTGCATTTGTAGTAACTCCT+CGG 0.563360 5_2:+55568414 None:intergenic
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5_2:+55569173 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5_2:-55569264 Msa0776880:CDS
GGGGAATCTGCAAATGAGAA+AGG 0.570197 5_2:-55569244 Msa0776880:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5_2:-55569265 Msa0776880:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5_2:+55569306 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5_2:+55569981 None:intergenic
GCTTCCTCACTGGACAGTTG+GGG 0.575290 5_2:+55566986 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5_2:-55567658 Msa0776880:CDS
CAAACCAACATCACTAACAA+TGG 0.577819 5_2:-55568561 Msa0776880:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5_2:+55566891 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5_2:-55570028 Msa0776880:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5_2:+55569953 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5_2:-55568125 Msa0776880:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5_2:-55568271 Msa0776880:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5_2:-55568698 Msa0776880:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5_2:-55566833 Msa0776880:CDS
GACATTGATATCCTGGATGA+TGG 0.594877 5_2:-55567668 Msa0776880:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5_2:+55569955 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5_2:-55568065 Msa0776880:intron
CATGTGCGATCAAGATTGGA+CGG 0.601440 5_2:-55566257 Msa0776880:three_prime_UTR
AGAAAGAGAAGAGAAAAGGG+TGG 0.602299 5_2:+55570204 None:intergenic
TGTGGCCTCTGACTCTGAAG+AGG 0.602459 5_2:+55566802 None:intergenic
GCATAACAGGAGAATCAAGA+AGG 0.606162 5_2:+55569899 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5_2:-55566841 Msa0776880:CDS
TTAAGGGCAATCCAAATCCA+AGG 0.610722 5_2:-55567613 Msa0776880:intron
TGGATGATGGTTACAGATGG+AGG 0.611243 5_2:-55567655 Msa0776880:CDS
GAGTTTCTCCTTGTACATTG+AGG 0.612279 5_2:+55568297 None:intergenic
GCTGTGATCACAACTTATGA+GGG 0.613415 5_2:-55566934 Msa0776880:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5_2:+55569908 None:intergenic
TTGATGTTGAGAAATGGAAG+GGG 0.618038 5_2:+55570262 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5_2:-55568111 Msa0776880:CDS
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5_2:-55566807 Msa0776880:CDS
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5_2:+55570045 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5_2:-55568085 Msa0776880:CDS
AAGGAAATTATGGATTCTCG+AGG 0.628224 5_2:-55566729 Msa0776880:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5_2:-55570027 Msa0776880:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5_2:+55569954 None:intergenic
AGGCCACAACAAGCACCTCA+AGG 0.639205 5_2:-55566787 Msa0776880:CDS
TTGATCGCACATGCCAAATG+CGG 0.650848 5_2:+55566267 None:intergenic
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5_2:-55568076 Msa0776880:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5_2:+55566951 None:intergenic
TTGAATGGTGATTGACCTTG+AGG 0.655573 5_2:+55566772 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5_2:+55569982 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5_2:-55566754 Msa0776880:CDS
CCGATCAAGATCAAGACAGA+CGG 0.665097 5_2:+55566167 None:intergenic
AATTCTTCAATATCAATAGG+TGG 0.674879 5_2:-55568159 Msa0776880:CDS
TTAAGGGAAGTGAAAATCCG+AGG 0.680545 5_2:-55568431 Msa0776880:CDS
GATCAATCATATGCATCACA+TGG 0.681918 5_2:-55568216 Msa0776880:CDS
TTAAGCCGAAGATCCGACGA+TGG 0.699822 5_2:-55568486 Msa0776880:CDS
CACACCCCAACTGTCCAGTG+AGG 0.726766 5_2:-55566990 Msa0776880:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5_2:-55569263 Msa0776880:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5_2:+55569922 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5_2:+55566893 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTAATCAATTGA+AGG - chr5_2:55566994-55567013 Msa0776880:CDS 10.0%
!!! TTTATGTAATTTTTATTTGA+TGG - chr5_2:55568642-55568661 Msa0776880:CDS 10.0%
!!! TAATTTTACATAAAATTTTC+AGG - chr5_2:55568671-55568690 Msa0776880:CDS 10.0%
!! ATATAAAGAGAGAAAAAAAT+GGG + chr5_2:55566164-55566183 None:intergenic 15.0%
!! AATATAAAGAGAGAAAAAAA+TGG + chr5_2:55566165-55566184 None:intergenic 15.0%
!!! TTTTTTTTTGTTTTTGGTTT+TGG + chr5_2:55566219-55566238 None:intergenic 15.0%
!!! TGAAGTTTTTTTTTTGTTTT+TGG + chr5_2:55566225-55566244 None:intergenic 15.0%
!!! TTTATTTGTTTTTTTTGACA+TGG - chr5_2:55566678-55566697 Msa0776880:CDS 15.0%
!!! TTATTTGTTTTTTTTGACAT+GGG - chr5_2:55566679-55566698 Msa0776880:CDS 15.0%
!!! TGCTTTAGTTTTTTTTTTTT+TGG - chr5_2:55567030-55567049 Msa0776880:intron 15.0%
!! CTCATATATTTATTATATTG+TGG - chr5_2:55568571-55568590 Msa0776880:CDS 15.0%
!!! AGATTTTATGATTTGAATTA+TGG + chr5_2:55570259-55570278 None:intergenic 15.0%
!!! AAAATTTTGATGTTGAGAAA+TGG + chr5_2:55566196-55566215 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG - chr5_2:55566421-55566440 Msa0776880:three_prime_UTR 20.0%
!! AAAATGAAAGAAACTAACAT+TGG + chr5_2:55566585-55566604 None:intergenic 20.0%
!!! TTTTCATCATCTATGTTTAA+TGG - chr5_2:55566712-55566731 Msa0776880:CDS 20.0%
!! TTTCATCATCTATGTTTAAT+GGG - chr5_2:55566713-55566732 Msa0776880:CDS 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - chr5_2:55566946-55566965 Msa0776880:CDS 20.0%
!! GCAATAAATGCTTAAAAAAT+TGG + chr5_2:55567334-55567353 None:intergenic 20.0%
!! GAGATTAAAAAAATTGAAGT+TGG - chr5_2:55567429-55567448 Msa0776880:intron 20.0%
!! AAAACATGGAATCATATTTA+TGG + chr5_2:55568441-55568460 None:intergenic 20.0%
!! TTAAGAACTTCAATAAAACA+TGG + chr5_2:55568455-55568474 None:intergenic 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG - chr5_2:55568682-55568701 Msa0776880:CDS 20.0%
!!! ATAATTTTATACCTTGGATT+TGG + chr5_2:55568850-55568869 None:intergenic 20.0%
!!! AAGTGAATAATTTTATACCT+TGG + chr5_2:55568856-55568875 None:intergenic 20.0%
!! AGAAATAACCAAATTAGAAA+AGG + chr5_2:55569136-55569155 None:intergenic 20.0%
!!! TTTCTAATTTGGTTATTTCT+TGG - chr5_2:55569136-55569155 Msa0776880:intron 20.0%
!!! TTTCATTTTTAGTAGATACA+TGG - chr5_2:55569883-55569902 Msa0776880:intron 20.0%
!! CAAAAAACAAATGCAATAAA+TGG + chr5_2:55569976-55569995 None:intergenic 20.0%
!!! CATTTATTGCATTTGTTTTT+TGG - chr5_2:55569974-55569993 Msa0776880:CDS 20.0%
!!! TTTTCTTGTAAAGTTTATAC+AGG - chr5_2:55570007-55570026 Msa0776880:CDS 20.0%
!!! CATTTTTTTTCATTAGTTTG+TGG - chr5_2:55570090-55570109 Msa0776880:CDS 20.0%
!! CTTCATATTTAATCATTTGT+GGG - chr5_2:55570141-55570160 Msa0776880:CDS 20.0%
! ATAAGAAAGAGAAGAGAAAA+GGG + chr5_2:55566251-55566270 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - chr5_2:55566420-55566439 Msa0776880:three_prime_UTR 25.0%
! GATGATAATAACAATTCAAG+GGG - chr5_2:55566422-55566441 Msa0776880:three_prime_UTR 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - chr5_2:55566752-55566771 Msa0776880:CDS 25.0%
!! AAGATTGTTCTTTTTCTGTT+TGG - chr5_2:55566821-55566840 Msa0776880:CDS 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + chr5_2:55566912-55566931 None:intergenic 25.0%
! TAATGCTGTTACTGAATTTA+TGG - chr5_2:55567077-55567096 Msa0776880:intron 25.0%
! AATGCTGTTACTGAATTTAT+GGG - chr5_2:55567078-55567097 Msa0776880:intron 25.0%
! TTAAGCATTTATTGCATGTT+TGG - chr5_2:55567339-55567358 Msa0776880:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG + chr5_2:55567650-55567669 None:intergenic 25.0%
!!! GTTGATCACATTATTTTTGT+TGG + chr5_2:55567656-55567675 None:intergenic 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG - chr5_2:55567683-55567702 Msa0776880:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG + chr5_2:55567687-55567706 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG - chr5_2:55568109-55568128 Msa0776880:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG - chr5_2:55568110-55568129 Msa0776880:CDS 25.0%
! ATTGATATTGAAGAATTCTC+AGG + chr5_2:55568287-55568306 None:intergenic 25.0%
! GAGAATTCTTCAATATCAAT+AGG - chr5_2:55568287-55568306 Msa0776880:CDS 25.0%
! AATTCTTCAATATCAATAGG+TGG - chr5_2:55568290-55568309 Msa0776880:CDS 25.0%
!! TGCATTTTACTTCAACATAA+AGG + chr5_2:55568514-55568533 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - chr5_2:55568513-55568532 Msa0776880:CDS 25.0%
! AAAAATGAAGGTGAAAATGA+GGG - chr5_2:55568694-55568713 Msa0776880:intron 25.0%
!! TACTACTACTAGTTAATTTG+AGG - chr5_2:55568923-55568942 Msa0776880:intron 25.0%
!! TTAATTTGAGGATTCAATGA+TGG - chr5_2:55568935-55568954 Msa0776880:intron 25.0%
! TATTTGTAAACTGCTATCAT+GGG + chr5_2:55568972-55568991 None:intergenic 25.0%
! ATATTTGTAAACTGCTATCA+TGG + chr5_2:55568973-55568992 None:intergenic 25.0%
! AGCAGTTTACAAATATTACT+TGG - chr5_2:55568977-55568996 Msa0776880:intron 25.0%
! AAATATTACTTGGTCAAATG+TGG - chr5_2:55568987-55569006 Msa0776880:intron 25.0%
!!! TTTGTTTCTCTATCTGTTTT+AGG - chr5_2:55569040-55569059 Msa0776880:intron 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - chr5_2:55569071-55569090 Msa0776880:intron 25.0%
!! GTGTTTAATTTATGACTTGT+AGG - chr5_2:55569420-55569439 Msa0776880:intron 25.0%
!!! ATTTTTAGTAGATACATGGA+AGG - chr5_2:55569887-55569906 Msa0776880:CDS 25.0%
! TTGTAAAGTTTATACAGGAT+GGG - chr5_2:55570012-55570031 Msa0776880:CDS 25.0%
!!! CTTTTATTTTCCAATACACA+AGG - chr5_2:55570059-55570078 Msa0776880:CDS 25.0%
! GCTTCATATTTAATCATTTG+TGG - chr5_2:55570140-55570159 Msa0776880:CDS 25.0%
TTTGATGTTGAGAAATGGAA+GGG + chr5_2:55566191-55566210 None:intergenic 30.0%
! TTTTGATGTTGAGAAATGGA+AGG + chr5_2:55566192-55566211 None:intergenic 30.0%
CATAAGAAAGAGAAGAGAAA+AGG + chr5_2:55566252-55566271 None:intergenic 30.0%
! CTTTTCTCTTCTCTTTCTTA+TGG - chr5_2:55566250-55566269 Msa0776880:three_prime_UTR 30.0%
AGAAAGTTGTTGACATGAAA+GGG + chr5_2:55566367-55566386 None:intergenic 30.0%
GCTAAGAAAAGTTTGAACAA+AGG - chr5_2:55566867-55566886 Msa0776880:CDS 30.0%
AATTGGATGAACAATTCTGA+GGG - chr5_2:55567185-55567204 Msa0776880:intron 30.0%
TGATGATTGAAAAGTTGTTG+TGG + chr5_2:55567279-55567298 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - chr5_2:55567284-55567303 Msa0776880:intron 30.0%
TGTAGTCAGTACATTATTGA+CGG - chr5_2:55567483-55567502 Msa0776880:intron 30.0%
TTCAAAACATCGATGATCAT+TGG + chr5_2:55567609-55567628 None:intergenic 30.0%
AAATCCATTGTTAGTGATGT+TGG + chr5_2:55567895-55567914 None:intergenic 30.0%
ATATGGACAAAAGCAAGTTA+AGG - chr5_2:55568001-55568020 Msa0776880:intron 30.0%
TATGGACAAAAGCAAGTTAA+GGG - chr5_2:55568002-55568021 Msa0776880:intron 30.0%
AAAGTTGAGAGATCAATTGA+GGG - chr5_2:55568083-55568102 Msa0776880:CDS 30.0%
TGATCATGGATTTCGTTAAT+CGG + chr5_2:55568218-55568237 None:intergenic 30.0%
AAGTTCTTAAATTGCTGATG+CGG - chr5_2:55568465-55568484 Msa0776880:CDS 30.0%
GAAAAATGAAGGTGAAAATG+AGG - chr5_2:55568693-55568712 Msa0776880:intron 30.0%
ATATGGACAGAAAGTTGTTA+AGG - chr5_2:55568819-55568838 Msa0776880:intron 30.0%
TATGGACAGAAAGTTGTTAA+GGG - chr5_2:55568820-55568839 Msa0776880:intron 30.0%
!! CTTTTTGGAAACTCTACTAT+AGG - chr5_2:55569086-55569105 Msa0776880:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + chr5_2:55569123-55569142 None:intergenic 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - chr5_2:55569125-55569144 Msa0776880:intron 30.0%
TAACCAAATTAGAAAAGGCA+AGG + chr5_2:55569131-55569150 None:intergenic 30.0%
!! GGTTATTTCTTGGTCAAATT+TGG - chr5_2:55569146-55569165 Msa0776880:intron 30.0%
!!! GCATTTGTTTTTTGGATGTT+TGG - chr5_2:55569982-55570001 Msa0776880:CDS 30.0%
CTTGTAAAGTTTATACAGGA+TGG - chr5_2:55570011-55570030 Msa0776880:CDS 30.0%
!! TTAATCATTTGTGGGTTGAT+TGG - chr5_2:55570149-55570168 Msa0776880:CDS 30.0%
TTGATGTTGAGAAATGGAAG+GGG + chr5_2:55566190-55566209 None:intergenic 35.0%
GAGAAAGTTGTTGACATGAA+AGG + chr5_2:55566368-55566387 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + chr5_2:55566499-55566518 None:intergenic 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + chr5_2:55566500-55566519 None:intergenic 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + chr5_2:55566509-55566528 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + chr5_2:55566566-55566585 None:intergenic 35.0%
CAATTGGATGAACAATTCTG+AGG - chr5_2:55567184-55567203 Msa0776880:intron 35.0%
ATTGGATGAACAATTCTGAG+GGG - chr5_2:55567186-55567205 Msa0776880:intron 35.0%
! TTCTCTTTTCAAACCCAACA+AGG - chr5_2:55567233-55567252 Msa0776880:intron 35.0%
! TCTCTTTTCAAACCCAACAA+GGG - chr5_2:55567234-55567253 Msa0776880:intron 35.0%
TTTCAATCATCAACTGTTGG+TGG - chr5_2:55567287-55567306 Msa0776880:intron 35.0%
CAAACCAACATCACTAACAA+TGG - chr5_2:55567888-55567907 Msa0776880:intron 35.0%
GGATACAATTGGCGAAAATA+TGG - chr5_2:55567984-55568003 Msa0776880:intron 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + chr5_2:55568064-55568083 None:intergenic 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + chr5_2:55568065-55568084 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + chr5_2:55568074-55568093 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG - chr5_2:55568082-55568101 Msa0776880:CDS 35.0%
ATTTCGTTAATCGGATCAAC+AGG + chr5_2:55568209-55568228 None:intergenic 35.0%
GTGATGCATATGATTGATCA+TGG + chr5_2:55568232-55568251 None:intergenic 35.0%
GATCAATCATATGCATCACA+TGG - chr5_2:55568233-55568252 Msa0776880:CDS 35.0%
TCATATGCATCACATGGTAA+TGG - chr5_2:55568239-55568258 Msa0776880:CDS 35.0%
!! ATCACATGGTAATGGACAAA+TGG - chr5_2:55568247-55568266 Msa0776880:CDS 35.0%
! TGGTGATGAATTTGATGAAG+AGG - chr5_2:55568364-55568383 Msa0776880:CDS 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + chr5_2:55568392-55568411 None:intergenic 35.0%
GTTGTTTGAACTACAACTCT+AGG + chr5_2:55568757-55568776 None:intergenic 35.0%
AACAAGTGACATTGATATCC+TGG - chr5_2:55568774-55568793 Msa0776880:intron 35.0%
ATAAAACACCGACACAGAAA+CGG + chr5_2:55569373-55569392 None:intergenic 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + chr5_2:55569605-55569624 None:intergenic 35.0%
AACCCTTCAAATCCAAACAA+TGG - chr5_2:55569608-55569627 Msa0776880:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + chr5_2:55569613-55569632 None:intergenic 35.0%
AAATCCAAACAATGGAGCAA+TGG - chr5_2:55569616-55569635 Msa0776880:intron 35.0%
TCGAGAATCCATAATTTCCT+TGG + chr5_2:55569721-55569740 None:intergenic 35.0%
AAGGAAATTATGGATTCTCG+AGG - chr5_2:55569720-55569739 Msa0776880:intron 35.0%
! CTCGAGGTTTGATAATCAAA+TGG - chr5_2:55569736-55569755 Msa0776880:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - chr5_2:55569788-55569807 Msa0776880:intron 35.0%
TCAAGGAACATGTCATCTTT+AGG + chr5_2:55569839-55569858 None:intergenic 35.0%
TTCAGCAAAGCAAAGATTCA+AGG + chr5_2:55569856-55569875 None:intergenic 35.0%
TTAGTAGATACATGGAAGGT+TGG - chr5_2:55569891-55569910 Msa0776880:CDS 35.0%
! ACATGGAAGGTTGGAAATTT+TGG - chr5_2:55569900-55569919 Msa0776880:CDS 35.0%
!! AGGTTGGAAATTTTGGAAAG+TGG - chr5_2:55569907-55569926 Msa0776880:CDS 35.0%
!! GGTTGGAAATTTTGGAAAGT+GGG - chr5_2:55569908-55569927 Msa0776880:CDS 35.0%
!! AAATTTTGGAAAGTGGGTCT+AGG - chr5_2:55569914-55569933 Msa0776880:CDS 35.0%
! AAGTTTATACAGGATGGGTT+TGG - chr5_2:55570017-55570036 Msa0776880:CDS 35.0%
TGCACAAAAACCTTGTGTAT+TGG + chr5_2:55570072-55570091 None:intergenic 35.0%
AGAAAGAGAAGAGAAAAGGG+TGG + chr5_2:55566248-55566267 None:intergenic 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG + chr5_2:55566452-55566471 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + chr5_2:55566497-55566516 None:intergenic 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + chr5_2:55566498-55566517 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - chr5_2:55566512-55566531 Msa0776880:three_prime_UTR 40.0%
GCATAACAGGAGAATCAAGA+AGG + chr5_2:55566553-55566572 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG - chr5_2:55567137-55567156 Msa0776880:intron 40.0%
CTGCTCAAAGCAACTACAAT+TGG - chr5_2:55567168-55567187 Msa0776880:intron 40.0%
GACTGTCCAATCTAGACTAA+TGG + chr5_2:55567510-55567529 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG - chr5_2:55567751-55567770 Msa0776880:CDS 40.0%
GTTTGAACACTAGCAATCTC+AGG + chr5_2:55567873-55567892 None:intergenic 40.0%
TTAAGGGAAGTGAAAATCCG+AGG - chr5_2:55568018-55568037 Msa0776880:intron 40.0%
GTGCATTTGTAGTAACTCCT+CGG + chr5_2:55568038-55568057 None:intergenic 40.0%
ATCCTAAGCCTCAATGTACA+AGG - chr5_2:55568144-55568163 Msa0776880:CDS 40.0%
GAGTTTCTCCTTGTACATTG+AGG + chr5_2:55568155-55568174 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - chr5_2:55568178-55568197 Msa0776880:CDS 40.0%
ATTTGATGAAGAGGAACCTG+AGG - chr5_2:55568373-55568392 Msa0776880:CDS 40.0%
AAGTAAAATGCAGGCTGATG+AGG - chr5_2:55568522-55568541 Msa0776880:CDS 40.0%
GACATTGATATCCTGGATGA+TGG - chr5_2:55568781-55568800 Msa0776880:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - chr5_2:55568802-55568821 Msa0776880:intron 40.0%
TTAAGGGCAATCCAAATCCA+AGG - chr5_2:55568836-55568855 Msa0776880:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + chr5_2:55569117-55569136 None:intergenic 40.0%
CGACATGACACTGACAAATA+TGG - chr5_2:55569266-55569285 Msa0776880:CDS 40.0%
ACACAGAAACGGACATAACA+TGG + chr5_2:55569362-55569381 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG - chr5_2:55569362-55569381 Msa0776880:intron 40.0%
AACGTGCCTCACATGATTTA+AGG - chr5_2:55569492-55569511 Msa0776880:intron 40.0%
ACGTGCCTCACATGATTTAA+GGG - chr5_2:55569493-55569512 Msa0776880:intron 40.0%
GCTGTGATCACAACTTATGA+GGG - chr5_2:55569515-55569534 Msa0776880:intron 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + chr5_2:55569599-55569618 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + chr5_2:55569614-55569633 None:intergenic 40.0%
TTGAATGGTGATTGACCTTG+AGG + chr5_2:55569680-55569699 None:intergenic 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + chr5_2:55569695-55569714 None:intergenic 40.0%
ATTCAACCTTCAAATGCTGC+AGG - chr5_2:55569694-55569713 Msa0776880:intron 40.0%
TTCAACCTTCAAATGCTGCA+GGG - chr5_2:55569695-55569714 Msa0776880:intron 40.0%
!! TGCTGCTGTTGATTCATGTA+AGG + chr5_2:55569764-55569783 None:intergenic 40.0%
!!! TGGTTTTTCCTCTAGAGCTA+AGG - chr5_2:55569808-55569827 Msa0776880:intron 40.0%
! TATACAGGATGGGTTTGGTT+TGG - chr5_2:55570022-55570041 Msa0776880:CDS 40.0%
!! CATTAGTTTGTGGCTTCTCT+TGG - chr5_2:55570100-55570119 Msa0776880:CDS 40.0%
TGGATGTAGTTATCCGCATT+TGG - chr5_2:55570169-55570188 Msa0776880:CDS 40.0%
TCATCTGAAGAAGCAGCAGA+AGG + chr5_2:55566407-55566426 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + chr5_2:55566471-55566490 None:intergenic 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + chr5_2:55566472-55566491 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + chr5_2:55566544-55566563 None:intergenic 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG + chr5_2:55567146-55567165 None:intergenic 45.0%
GGGGAATCTGCAAATGAGAA+AGG - chr5_2:55567205-55567224 Msa0776880:intron 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - chr5_2:55567501-55567520 Msa0776880:intron 45.0%
TTGCTGTGGTTGCTGGTAAT+TGG + chr5_2:55567931-55567950 None:intergenic 45.0%
CTTCGGCTTAAGGTTTGAGT+GGG + chr5_2:55567954-55567973 None:intergenic 45.0%
TCTTCGGCTTAAGGTTTGAG+TGG + chr5_2:55567955-55567974 None:intergenic 45.0%
TGTATCCATCGTCGGATCTT+CGG + chr5_2:55567971-55567990 None:intergenic 45.0%
GATCCGACGATGGATACAAT+TGG - chr5_2:55567973-55567992 Msa0776880:intron 45.0%
TCGCCAATTGTATCCATCGT+CGG + chr5_2:55567979-55567998 None:intergenic 45.0%
CTCCTTGTACATTGAGGCTT+AGG + chr5_2:55568149-55568168 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - chr5_2:55568324-55568343 Msa0776880:CDS 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - chr5_2:55568384-55568403 Msa0776880:CDS 45.0%
CGACATCACAACTGCAATTG+CGG + chr5_2:55568548-55568567 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG + chr5_2:55568733-55568752 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - chr5_2:55568791-55568810 Msa0776880:intron 45.0%
TCCATCTGTAACCATCATCC+AGG + chr5_2:55568795-55568814 None:intergenic 45.0%
! TGGATGATGGTTACAGATGG+AGG - chr5_2:55568794-55568813 Msa0776880:intron 45.0%
AAACTGCTATCATGGGAGTG+AGG + chr5_2:55568965-55568984 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + chr5_2:55569501-55569520 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - chr5_2:55569514-55569533 Msa0776880:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + chr5_2:55569583-55569602 None:intergenic 45.0%
ATGGCCATTGCTCCATTGTT+TGG + chr5_2:55569623-55569642 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - chr5_2:55569624-55569643 Msa0776880:intron 45.0%
GCAGCAGCAACAACAACAAA+TGG - chr5_2:55569778-55569797 Msa0776880:intron 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + chr5_2:55569819-55569838 None:intergenic 45.0%
!! GGCTTCTCTTGGCTTTAGTT+AGG - chr5_2:55570111-55570130 Msa0776880:CDS 45.0%
TTGATCGCACATGCCAAATG+CGG + chr5_2:55570185-55570204 None:intergenic 45.0%
TTGGCATGTGCGATCAAGAT+TGG - chr5_2:55570188-55570207 Msa0776880:exon 45.0%
CATGTGCGATCAAGATTGGA+CGG - chr5_2:55570192-55570211 Msa0776880:exon 45.0%
CCGATCAAGATCAAGACAGA+CGG + chr5_2:55570285-55570304 None:intergenic 45.0%
CCGTCTGTCTTGATCTTGAT+CGG - chr5_2:55570282-55570301 Msa0776880:five_prime_UTR 45.0%
GACAAAGGCAAAGAAGGAGG+GGG + chr5_2:55566470-55566489 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + chr5_2:55566473-55566492 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + chr5_2:55566476-55566495 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + chr5_2:55566545-55566564 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG + chr5_2:55567152-55567171 None:intergenic 50.0%
!! AAGGTTTGAGTGGGTTGCTG+TGG + chr5_2:55567945-55567964 None:intergenic 50.0%
ATCGTCGGATCTTCGGCTTA+AGG + chr5_2:55567964-55567983 None:intergenic 50.0%
TTAAGCCGAAGATCCGACGA+TGG - chr5_2:55567963-55567982 Msa0776880:intron 50.0%
TCTCACCAAAGGAGTCGATC+TGG - chr5_2:55568335-55568354 Msa0776880:CDS 50.0%
TGCTTCCTCACTGGACAGTT+GGG + chr5_2:55569467-55569486 None:intergenic 50.0%
ATGCTTCCTCACTGGACAGT+TGG + chr5_2:55569468-55569487 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + chr5_2:55569642-55569661 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - chr5_2:55569642-55569661 Msa0776880:intron 50.0%
! TGACCTTGAGGTGCTTGTTG+TGG + chr5_2:55569668-55569687 None:intergenic 50.0%
CTGCAGGGCCAAGGAAATTA+TGG - chr5_2:55569710-55569729 Msa0776880:intron 50.0%
GAAACAGGGGGAGGTGACAA+AGG + chr5_2:55566485-55566504 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + chr5_2:55566494-55566513 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + chr5_2:55566530-55566549 None:intergenic 55.0%
AGGTCAGCAGGGCTTAAACC+AGG + chr5_2:55566533-55566552 None:intergenic 55.0%
AACAGCAGCAGGCCCTTGTT+GGG + chr5_2:55567249-55567268 None:intergenic 55.0%
TAACAGCAGCAGGCCCTTGT+TGG + chr5_2:55567250-55567269 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + chr5_2:55567260-55567279 None:intergenic 55.0%
CACCAAAGGAGTCGATCTGG+TGG - chr5_2:55568338-55568357 Msa0776880:CDS 55.0%
! CACCACCAGATCGACTCCTT+TGG + chr5_2:55568343-55568362 None:intergenic 55.0%
GCTTCCTCACTGGACAGTTG+GGG + chr5_2:55569466-55569485 None:intergenic 55.0%
CGTTCGACATGCTTCCTCAC+TGG + chr5_2:55569476-55569495 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + chr5_2:55569650-55569669 None:intergenic 55.0%
AGGCCACAACAAGCACCTCA+AGG - chr5_2:55569662-55569681 Msa0776880:intron 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + chr5_2:55569703-55569722 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - chr5_2:55569701-55569720 Msa0776880:intron 55.0%
!! GAGTGGGTTGCTGTGGTTGC+TGG + chr5_2:55567938-55567957 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG - chr5_2:55568344-55568363 Msa0776880:CDS 60.0%
CACACCCCAACTGTCCAGTG+AGG - chr5_2:55569459-55569478 Msa0776880:intron 60.0%
TTCCACTTCCACGAGCAGCG+GGG + chr5_2:55569559-55569578 None:intergenic 60.0%
CTTCCACTTCCACGAGCAGC+GGG + chr5_2:55569560-55569579 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + chr5_2:55569561-55569580 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + chr5_2:55569550-55569569 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - chr5_2:55569548-55569567 Msa0776880:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - chr5_2:55569554-55569573 Msa0776880:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 55566149 55570322 55566149 ID=Msa0776880;Name=Msa0776880
chr5_2 mRNA 55566149 55570322 55566149 ID=Msa0776880-mRNA-1;Parent=Msa0776880;Name=Msa0776880-mRNA-1;_AED=0.12;_eAED=0.12;_QI=120|1|1|1|1|1|5|448|580
chr5_2 exon 55566149 55567029 55566149 ID=Msa0776880-mRNA-1:exon:16419;Parent=Msa0776880-mRNA-1
chr5_2 exon 55567614 55567778 55567614 ID=Msa0776880-mRNA-1:exon:16418;Parent=Msa0776880-mRNA-1
chr5_2 exon 55568066 55568709 55568066 ID=Msa0776880-mRNA-1:exon:16417;Parent=Msa0776880-mRNA-1
chr5_2 exon 55569152 55569334 55569152 ID=Msa0776880-mRNA-1:exon:16416;Parent=Msa0776880-mRNA-1
chr5_2 exon 55569885 55570322 55569885 ID=Msa0776880-mRNA-1:exon:16415;Parent=Msa0776880-mRNA-1
chr5_2 five_prime_UTR 55570203 55570322 55570203 ID=Msa0776880-mRNA-1:five_prime_utr;Parent=Msa0776880-mRNA-1
chr5_2 CDS 55569885 55570202 55569885 ID=Msa0776880-mRNA-1:cds;Parent=Msa0776880-mRNA-1
chr5_2 CDS 55569152 55569334 55569152 ID=Msa0776880-mRNA-1:cds;Parent=Msa0776880-mRNA-1
chr5_2 CDS 55568066 55568709 55568066 ID=Msa0776880-mRNA-1:cds;Parent=Msa0776880-mRNA-1
chr5_2 CDS 55567614 55567778 55567614 ID=Msa0776880-mRNA-1:cds;Parent=Msa0776880-mRNA-1
chr5_2 CDS 55566597 55567029 55566597 ID=Msa0776880-mRNA-1:cds;Parent=Msa0776880-mRNA-1
chr5_2 three_prime_UTR 55566149 55566596 55566149 ID=Msa0776880-mRNA-1:three_prime_utr;Parent=Msa0776880-mRNA-1
Gene Sequence

>Msa0776880

ATGGCATCTTCATCAACAACTAGTTTTGAAAATAATAATAATAATAATAATCAAAACTCTTTGAACTCATTCAACAATTTCACTTTCTCAACTCACCCTTTCATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCTGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAACAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCATCTGAAAAGAATATGATACAAACTACTGAGAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACATCACTAACAATGGATTTCAATCAGACTACTCCAATTACCAGCAACCACAGCAACCCACTCAAACCTTAAGCCGAAGATCCGACGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGGAGTTACTACAAATGCACATACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATCCTAAGCCTCAATGTACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTGATCCGATTAACGAAATCCATGATCAATCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATAGGTGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAAACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCCAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAACATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAACAAGCACCTCAAGGTCAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCGAGGTTTGATAATCAAATGGTGCCTTACATGAATCAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTTTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA
Protein sequence

>Msa0776880

MASSSTTSFENNNNNNNQNSLNSFNNFTFSTHPFMSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNLQMRKENFSFQTQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTTENNNSSMQSFSPEIASVQTNITNNGFQSDYSNYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHPKPQCTRRNSSSSSNALVVVPVDPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC*