AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0814080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814080 MtrunA17_Chr5g0432161 95.365 561 20 5 21 578 25 582 0.0 951
Msa0814080 MtrunA17_Chr3g0106491 55.148 573 161 21 33 577 3 507 6.03e-173 499
Msa0814080 MtrunA17_Chr7g0243891 47.794 544 225 16 56 577 35 541 1.67e-139 416
Msa0814080 MtrunA17_Chr4g0004911 48.522 406 150 14 79 478 47 399 6.19e-105 325
Msa0814080 MtrunA17_Chr3g0079691 42.060 466 190 8 78 479 110 559 2.96e-96 308
Msa0814080 MtrunA17_Chr3g0079691 54.118 85 37 2 415 498 280 363 8.39e-18 87.4
Msa0814080 MtrunA17_Chr3g0079691 48.315 89 42 3 224 309 479 566 3.37e-15 79.0
Msa0814080 MtrunA17_Chr5g0445311 42.759 435 205 11 57 479 26 428 2.82e-92 293
Msa0814080 MtrunA17_Chr5g0445311 50.649 77 24 2 415 491 200 262 3.67e-15 78.6
Msa0814080 MtrunA17_Chr7g0218081 40.246 487 211 14 33 492 53 486 7.49e-85 273
Msa0814080 MtrunA17_Chr3g0101131 57.422 256 78 7 235 477 240 477 7.83e-85 275
Msa0814080 MtrunA17_Chr3g0101131 42.056 107 47 3 415 521 243 334 1.09e-15 80.5
Msa0814080 MtrunA17_Chr5g0418191 51.504 266 110 7 224 484 137 388 5.91e-78 253
Msa0814080 MtrunA17_Chr5g0418191 45.745 94 47 3 218 308 298 390 4.23e-15 77.8
Msa0814080 MtrunA17_Chr7g0249311 49.825 285 97 4 234 477 175 454 2.64e-77 258
Msa0814080 MtrunA17_Chr7g0249311 59.701 67 26 1 415 481 179 244 6.85e-17 84.3
Msa0814080 MtrunA17_Chr7g0249311 46.078 102 44 4 238 329 392 492 1.28e-15 80.1
Msa0814080 MtrunA17_Chr7g0263531 48.828 256 104 7 230 474 181 420 2.70e-74 243
Msa0814080 MtrunA17_Chr7g0263531 28.931 159 87 4 162 296 264 420 9.08e-12 67.4
Msa0814080 MtrunA17_Chr4g0042831 48.617 253 83 6 233 484 140 346 9.78e-70 229
Msa0814080 MtrunA17_Chr5g0447701 43.028 251 126 4 228 478 82 315 5.07e-54 188
Msa0814080 MtrunA17_Chr4g0074001 39.841 251 127 6 237 477 185 421 1.14e-45 168
Msa0814080 MtrunA17_Chr7g0249301 80.488 82 16 0 396 477 273 354 5.18e-42 155
Msa0814080 MtrunA17_Chr7g0249301 65.278 72 25 0 239 310 63 134 1.21e-24 106
Msa0814080 MtrunA17_Chr7g0249301 47.222 108 50 5 414 517 61 165 2.87e-16 80.9
Msa0814080 MtrunA17_Chr7g0249301 58.065 62 21 2 238 296 292 351 2.51e-14 75.1
Msa0814080 MtrunA17_Chr5g0447711 33.594 256 138 5 225 478 68 293 1.21e-38 144
Msa0814080 MtrunA17_Chr5g0432071 49.324 148 68 4 201 347 70 211 2.44e-35 132
Msa0814080 MtrunA17_Chr5g0432071 50.000 78 35 2 415 489 104 180 9.00e-17 79.3
Msa0814080 MtrunA17_Chr8g0335811 60.870 92 34 1 380 471 121 210 2.01e-33 127
Msa0814080 MtrunA17_Chr8g0335811 39.831 118 58 3 179 293 103 210 1.28e-15 76.6
Msa0814080 MtrunA17_Chr1g0188941 67.089 79 26 0 396 474 32 110 2.38e-33 123
Msa0814080 MtrunA17_Chr1g0188941 55.000 60 26 1 238 296 51 110 6.46e-17 77.0
Msa0814080 MtrunA17_Chr3g0129361 66.216 74 25 0 398 471 127 200 1.16e-29 116
Msa0814080 MtrunA17_Chr3g0129361 56.140 57 24 1 238 293 144 200 1.27e-14 73.6
Msa0814080 MtrunA17_Chr8g0383351 65.333 75 25 1 398 471 142 216 2.86e-28 113
Msa0814080 MtrunA17_Chr8g0383351 56.140 57 24 1 238 293 160 216 8.94e-15 74.3
Msa0814080 MtrunA17_Chr4g0051881 47.581 124 51 2 372 481 122 245 1.16e-26 111
Msa0814080 MtrunA17_Chr4g0051881 56.522 69 29 1 238 305 178 246 3.00e-17 83.6
Msa0814080 MtrunA17_Chr2g0294231 62.338 77 29 0 399 475 187 263 3.76e-26 110
Msa0814080 MtrunA17_Chr2g0294231 54.412 68 30 1 238 304 203 270 3.84e-16 80.5
Msa0814080 MtrunA17_Chr1g0150801 60.526 76 29 1 396 471 84 158 5.65e-26 104
Msa0814080 MtrunA17_Chr1g0150801 51.515 66 31 1 230 294 94 159 1.68e-15 74.3
Msa0814080 MtrunA17_Chr7g0270191 52.747 91 43 0 399 489 129 219 8.84e-26 107
Msa0814080 MtrunA17_Chr7g0270191 37.383 107 61 2 210 310 112 218 2.85e-15 76.6
Msa0814080 MtrunA17_Chr1g0194481 53.846 91 42 0 399 489 142 232 9.14e-26 108
Msa0814080 MtrunA17_Chr1g0194481 41.053 95 50 2 212 300 127 221 1.33e-15 78.2
Msa0814080 MtrunA17_Chr8g0386241 47.059 102 54 0 390 491 78 179 2.91e-25 102
Msa0814080 MtrunA17_Chr8g0386241 56.897 58 24 1 238 294 103 160 5.96e-16 76.3
Msa0814080 MtrunA17_Chr5g0443131 60.759 79 30 1 401 478 143 221 6.28e-25 105
Msa0814080 MtrunA17_Chr5g0443131 52.239 67 31 1 238 303 157 223 7.99e-15 75.9
Msa0814080 MtrunA17_Chr7g0248721 53.333 90 41 1 382 471 108 196 9.42e-25 102
Msa0814080 MtrunA17_Chr7g0248721 50.000 66 31 2 230 294 133 197 2.76e-13 69.3
Msa0814080 MtrunA17_Chr5g0418781 54.878 82 37 0 390 471 99 180 9.65e-25 104
Msa0814080 MtrunA17_Chr5g0418781 57.895 57 23 1 238 293 124 180 1.06e-12 68.9
Msa0814080 MtrunA17_Chr7g0224801 54.321 81 37 0 406 486 84 164 1.31e-24 100
Msa0814080 MtrunA17_Chr7g0224801 50.794 63 30 1 238 299 93 155 1.30e-14 72.0
Msa0814080 MtrunA17_Chr4g0060271 45.946 111 52 3 368 474 209 315 5.10e-24 106
Msa0814080 MtrunA17_Chr4g0060271 52.459 61 27 2 238 296 255 315 2.22e-13 73.2
Msa0814080 MtrunA17_Chr2g0302391 49.020 102 50 2 377 476 172 273 7.61e-24 104
Msa0814080 MtrunA17_Chr2g0302391 39.535 86 45 3 232 310 200 285 2.43e-11 65.9
Msa0814080 MtrunA17_Chr3g0099641 47.727 88 45 1 388 474 224 311 8.60e-24 104
Msa0814080 MtrunA17_Chr3g0099641 38.824 85 50 2 239 321 252 336 5.89e-13 71.2
Msa0814080 MtrunA17_Chr4g0068541 58.442 77 32 0 399 475 192 268 9.15e-24 103
Msa0814080 MtrunA17_Chr4g0068541 53.125 64 29 1 238 300 208 271 1.58e-14 75.9
Msa0814080 MtrunA17_Chr4g0075201 52.381 84 39 1 394 476 246 329 5.96e-23 102
Msa0814080 MtrunA17_Chr4g0075201 50.820 61 28 2 238 296 267 327 3.40e-13 72.0
Msa0814080 MtrunA17_Chr3g0129321 54.667 75 34 0 401 475 104 178 6.97e-23 97.1
Msa0814080 MtrunA17_Chr3g0129321 53.333 60 27 1 238 296 118 177 5.10e-13 68.6
Msa0814080 MtrunA17_Chr2g0322391 52.381 84 39 1 394 476 328 411 9.20e-23 102
Msa0814080 MtrunA17_Chr2g0322391 38.554 83 49 2 238 318 349 431 1.44e-11 67.4
Msa0814080 MtrunA17_Chr2g0288871 53.165 79 36 1 397 474 287 365 1.11e-22 102
Msa0814080 MtrunA17_Chr2g0288871 51.667 60 27 2 239 296 306 365 1.19e-13 73.9
Msa0814080 MtrunA17_Chr8g0383251 53.425 73 34 0 402 474 95 167 1.12e-22 95.5
Msa0814080 MtrunA17_Chr8g0383251 53.333 60 27 1 238 296 108 167 3.06e-13 68.6
Msa0814080 MtrunA17_Chr4g0051181 53.165 79 36 1 399 476 227 305 1.55e-22 101
Msa0814080 MtrunA17_Chr4g0051181 54.098 61 26 2 238 296 243 303 2.90e-14 75.5
Msa0814080 MtrunA17_Chr7g0270831 48.837 86 43 1 399 483 200 285 1.62e-22 100
Msa0814080 MtrunA17_Chr7g0270831 51.667 60 27 2 239 296 217 276 2.43e-13 72.4
Msa0814080 MtrunA17_Chr7g0216891 55.000 80 31 2 393 471 201 276 6.33e-22 99.8
Msa0814080 MtrunA17_Chr7g0216891 52.542 59 26 2 238 294 219 277 1.83e-12 70.1
Msa0814080 MtrunA17_Chr1g0189391 47.959 98 47 2 375 471 60 154 1.96e-21 95.9
Msa0814080 MtrunA17_Chr1g0189391 51.724 58 26 2 238 293 97 154 3.61e-11 64.7
Msa0814080 MtrunA17_Chr4g0025061 46.237 93 49 1 385 476 330 422 4.42e-21 97.4
Msa0814080 MtrunA17_Chr4g0025061 42.466 73 40 2 239 309 361 433 6.06e-12 68.6
Msa0814080 MtrunA17_Chr4g0053281 51.765 85 37 2 396 479 250 331 5.91e-21 94.4
Msa0814080 MtrunA17_Chr4g0053281 50.877 57 26 2 239 293 267 323 8.76e-13 69.7
Msa0814080 MtrunA17_Chr4g0025051 37.879 132 81 1 345 475 265 396 1.02e-20 96.3
Msa0814080 MtrunA17_Chr4g0025051 39.726 73 42 2 239 309 336 408 7.36e-11 65.1
Msa0814080 MtrunA17_Chr1g0147881 56.098 82 32 2 396 476 246 324 1.43e-20 93.2
Msa0814080 MtrunA17_Chr1g0147881 54.386 57 24 2 239 293 263 319 8.11e-12 67.0
Msa0814080 MtrunA17_Chr7g0238921 36.735 147 76 3 415 544 124 270 4.33e-20 91.7
Msa0814080 MtrunA17_Chr7g0238921 63.158 57 20 1 238 293 124 180 8.38e-16 78.6
Msa0814080 MtrunA17_Chr6g0485431 49.398 83 41 1 393 474 132 214 7.61e-20 91.7
Msa0814080 MtrunA17_Chr6g0485431 37.168 113 53 5 236 330 152 264 1.12e-13 72.8
Msa0814080 MtrunA17_Chr3g0136961 53.425 73 31 3 402 471 123 195 2.41e-19 89.0
Msa0814080 MtrunA17_Chr3g0136961 32.418 182 91 8 151 319 66 228 5.23e-16 79.0
Msa0814080 MtrunA17_Chr6g0468181 68.519 54 17 0 254 307 18 71 4.43e-19 83.2
Msa0814080 MtrunA17_Chr5g0401821 51.899 79 37 1 396 473 180 258 4.52e-19 87.4
Msa0814080 MtrunA17_Chr5g0401821 50.877 57 26 2 239 293 200 256 2.22e-12 67.8
Msa0814080 MtrunA17_Chr1g0150271 50.794 63 30 1 413 474 99 161 1.46e-18 85.9
Msa0814080 MtrunA17_Chr1g0150271 38.889 90 45 3 227 306 82 171 4.46e-12 66.6
Msa0814080 MtrunA17_Chr4g0071521 48.276 87 44 1 395 480 225 311 1.62e-18 86.7
Msa0814080 MtrunA17_Chr4g0001361 43.396 106 49 4 385 485 137 236 1.68e-18 86.7
Msa0814080 MtrunA17_Chr4g0001361 53.333 60 26 2 239 296 163 222 3.02e-15 77.0
Msa0814080 MtrunA17_Chr2g0333851 54.688 64 28 1 413 475 167 230 3.30e-18 85.9
Msa0814080 MtrunA17_Chr2g0333851 51.667 60 27 2 239 296 170 229 5.17e-14 73.2
Msa0814080 MtrunA17_Chr1g0150281 41.935 93 47 4 385 471 106 197 5.18e-18 84.7
Msa0814080 MtrunA17_Chr1g0150281 50.877 57 26 2 239 293 141 197 1.50e-13 71.6
Msa0814080 MtrunA17_Chr3g0139021 48.718 78 39 1 396 472 295 372 1.58e-16 82.0
Msa0814080 MtrunA17_Chr7g0228941 49.351 77 36 2 396 471 35 109 1.63e-16 76.3
Msa0814080 MtrunA17_Chr1g0184691 49.351 77 38 1 396 471 274 350 3.15e-16 80.5
Msa0814080 MtrunA17_Chr1g0184691 52.542 59 26 2 239 295 294 352 1.23e-12 69.7
Msa0814080 MtrunA17_Chr4g0024391 39.785 93 55 1 385 476 199 291 6.34e-16 80.9
Msa0814080 MtrunA17_Chr2g0284321 52.381 63 29 1 416 477 36 98 2.55e-15 75.5
Msa0814080 MtrunA17_Chr2g0284321 48.333 60 29 2 239 296 36 95 3.49e-11 63.2
Msa0814080 MtrunA17_Chr8g0379461 40.000 90 51 2 416 502 77 166 2.67e-15 75.9
Msa0814080 MtrunA17_Chr8g0379461 38.710 93 49 4 239 329 77 163 1.54e-11 64.7
Msa0814080 MtrunA17_Chr2g0289181 53.226 62 28 1 416 476 15 76 2.96e-15 75.5
Msa0814080 MtrunA17_Chr2g0289181 56.667 60 24 2 239 296 15 74 2.76e-14 72.8
Msa0814080 MtrunA17_Chr7g0270051 34.513 113 61 2 388 487 14 126 9.30e-15 74.7
Msa0814080 MtrunA17_Chr7g0270051 53.333 60 26 2 239 296 54 113 1.17e-12 68.6
Msa0814080 MtrunA17_Chr1g0202461 38.947 95 56 2 396 489 243 336 1.29e-13 72.8
Msa0814080 MtrunA17_Chr1g0202461 47.945 73 34 3 237 307 260 330 5.00e-12 67.8
Msa0814080 MtrunA17_Chr8g0387501 49.296 71 32 3 239 307 130 198 2.98e-13 70.5
Msa0814080 MtrunA17_Chr8g0387501 43.243 74 41 1 414 486 128 201 4.32e-13 70.1
Msa0814080 MtrunA17_Chr5g0419241 54.167 48 22 0 394 441 56 103 3.79e-13 65.9
Msa0814080 MtrunA17_Chr2g0293481 37.190 121 66 3 378 496 238 350 3.80e-13 72.0
Msa0814080 MtrunA17_Chr2g0319961 47.619 63 32 1 416 477 81 143 4.32e-13 69.7
Msa0814080 MtrunA17_Chr8g0348311 46.154 78 40 2 416 492 156 232 1.42e-12 69.3
Msa0814080 MtrunA17_Chr1g0188961 58.824 51 20 1 435 485 3 52 1.82e-12 62.8
Msa0814080 MtrunA17_Chr3g0126391 45.588 68 33 2 228 291 123 190 1.85e-12 68.9
Msa0814080 MtrunA17_Chr3g0126391 50.847 59 26 1 414 469 132 190 5.02e-12 67.4
Msa0814080 MtrunA17_Chr8g0387981 51.724 58 24 2 238 291 132 189 2.33e-12 68.9
Msa0814080 MtrunA17_Chr8g0387981 32.308 130 60 3 415 541 132 236 2.43e-11 65.5
Msa0814080 MtrunA17_Chr7g0248691 47.692 65 33 1 416 479 155 219 5.11e-12 67.4
Msa0814080 MtrunA17_Chr4g0009881 50.847 59 28 1 239 297 18 75 1.79e-11 61.2
Msa0814080 MtrunA17_Chr8g0347251 42.254 71 32 3 238 304 136 201 6.20e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814080 AT2G38470.1 57.022 356 122 12 235 577 181 518 1.80e-108 335
Msa0814080 AT2G03340.1 44.521 438 187 14 58 494 108 490 8.34e-93 294
Msa0814080 AT4G26640.7 41.487 417 225 5 74 484 7 410 2.70e-92 293
Msa0814080 AT4G26640.2 41.487 417 225 5 74 484 47 450 8.12e-92 293
Msa0814080 AT2G30250.1 43.376 468 160 14 33 476 3 389 3.50e-89 281
Msa0814080 AT2G30250.1 49.383 81 38 2 224 301 312 392 6.89e-16 80.5
Msa0814080 AT4G26640.5 54.826 259 98 5 232 484 29 274 5.44e-86 272
Msa0814080 AT4G26640.6 54.826 259 98 5 232 484 29 274 5.44e-86 272
Msa0814080 AT4G26640.4 54.826 259 98 5 232 484 29 274 5.44e-86 272
Msa0814080 AT4G26640.3 54.826 259 98 5 232 484 29 274 5.44e-86 272
Msa0814080 AT4G26640.1 55.212 259 97 5 232 484 133 378 2.29e-85 274
Msa0814080 AT1G13960.1 41.628 430 174 10 58 474 103 468 1.34e-84 273
Msa0814080 AT5G07100.2 57.851 242 40 5 237 477 23 203 2.08e-83 259
Msa0814080 AT5G07100.2 50.000 78 36 2 222 296 123 200 4.03e-15 75.1
Msa0814080 AT5G07100.4 57.851 242 40 5 237 477 23 203 2.08e-83 259
Msa0814080 AT5G07100.4 50.000 78 36 2 222 296 123 200 4.03e-15 75.1
Msa0814080 AT5G07100.5 57.851 242 40 5 237 477 23 203 2.08e-83 259
Msa0814080 AT5G07100.5 50.000 78 36 2 222 296 123 200 4.03e-15 75.1
Msa0814080 AT5G07100.3 57.851 242 40 5 237 477 23 203 2.08e-83 259
Msa0814080 AT5G07100.3 50.000 78 36 2 222 296 123 200 4.03e-15 75.1
Msa0814080 AT5G07100.1 57.377 244 42 5 235 477 114 296 3.38e-83 263
Msa0814080 AT5G07100.1 34.783 299 125 12 55 296 8 293 3.79e-28 115
Msa0814080 AT5G07100.1 44.706 85 36 1 401 474 92 176 5.40e-16 79.7
Msa0814080 AT1G13960.2 47.797 295 129 4 195 474 31 315 1.10e-78 253
Msa0814080 AT4G26440.1 48.822 297 108 6 237 493 177 469 3.60e-75 249
Msa0814080 AT3G01080.2 51.261 238 78 4 237 474 204 403 2.00e-70 234
Msa0814080 AT3G01080.2 59.091 66 26 1 415 480 205 269 3.36e-17 85.1
Msa0814080 AT3G01080.2 47.674 86 42 2 214 296 318 403 1.15e-16 83.2
Msa0814080 AT3G01080.1 51.261 238 78 4 237 474 166 365 3.28e-70 233
Msa0814080 AT3G01080.1 59.091 66 26 1 415 480 167 231 3.73e-17 84.3
Msa0814080 AT3G01080.1 47.674 86 42 2 214 296 280 365 1.20e-16 82.8
Msa0814080 AT2G04880.2 45.935 246 116 4 238 477 111 345 1.16e-62 214
Msa0814080 AT2G04880.2 54.688 64 28 1 413 476 109 171 2.25e-16 82.4
Msa0814080 AT2G04880.2 55.882 68 29 1 230 296 275 342 6.00e-16 80.9
Msa0814080 AT2G37260.3 47.059 272 95 7 230 473 77 327 1.44e-62 210
Msa0814080 AT2G04880.1 44.195 267 114 6 238 477 111 369 1.46e-62 214
Msa0814080 AT2G04880.1 54.688 64 28 1 413 476 109 171 2.41e-16 82.4
Msa0814080 AT2G04880.1 55.882 68 29 1 230 296 299 366 6.00e-16 81.3
Msa0814080 AT2G37260.2 47.059 272 95 7 230 473 75 325 1.53e-62 210
Msa0814080 AT2G37260.1 47.059 272 95 7 230 473 157 407 8.64e-62 210
Msa0814080 AT4G30935.1 42.194 237 123 5 239 475 169 391 5.58e-48 174
Msa0814080 AT4G30935.1 50.000 70 34 1 239 307 332 401 2.86e-15 79.0
Msa0814080 AT5G56270.1 78.431 102 20 1 376 477 450 549 5.53e-47 175
Msa0814080 AT5G56270.1 39.286 224 125 5 85 301 117 336 3.06e-31 129
Msa0814080 AT5G56270.1 60.000 60 23 1 415 474 273 331 1.65e-15 80.5
Msa0814080 AT5G56270.1 52.632 76 33 2 224 296 471 546 1.81e-15 80.1
Msa0814080 AT4G12020.3 47.143 210 104 4 227 435 458 661 2.10e-45 173
Msa0814080 AT4G12020.3 50.820 61 29 1 414 474 467 526 7.54e-12 69.3
Msa0814080 AT4G12020.6 47.143 210 104 4 227 435 458 661 2.14e-45 173
Msa0814080 AT4G12020.6 50.820 61 29 1 414 474 467 526 7.86e-12 69.3
Msa0814080 AT4G12020.8 47.143 210 104 4 227 435 458 661 2.14e-45 173
Msa0814080 AT4G12020.8 50.820 61 29 1 414 474 467 526 7.86e-12 69.3
Msa0814080 AT4G12020.10 47.143 210 104 4 227 435 458 661 2.16e-45 173
Msa0814080 AT4G12020.10 50.820 61 29 1 414 474 467 526 7.54e-12 69.3
Msa0814080 AT4G12020.7 47.143 210 104 4 227 435 458 661 2.21e-45 173
Msa0814080 AT4G12020.7 50.820 61 29 1 414 474 467 526 7.74e-12 69.3
Msa0814080 AT4G12020.1 47.143 210 104 4 227 435 458 661 2.25e-45 173
Msa0814080 AT4G12020.1 50.820 61 29 1 414 474 467 526 7.62e-12 69.3
Msa0814080 AT4G12020.9 47.143 210 104 4 227 435 458 661 2.25e-45 173
Msa0814080 AT4G12020.9 50.820 61 29 1 414 474 467 526 7.62e-12 69.3
Msa0814080 AT4G12020.2 47.143 210 104 4 227 435 458 661 2.54e-45 173
Msa0814080 AT4G12020.2 50.820 61 29 1 414 474 467 526 8.02e-12 68.9
Msa0814080 AT4G12020.4 47.143 210 104 4 227 435 458 661 2.56e-45 173
Msa0814080 AT4G12020.4 48.529 68 34 1 414 481 467 533 7.88e-12 69.3
Msa0814080 AT4G12020.5 47.143 210 104 4 227 435 391 594 2.69e-45 173
Msa0814080 AT4G12020.5 48.529 68 34 1 414 481 400 466 8.39e-12 68.9
Msa0814080 AT4G12020.11 47.143 210 104 4 227 435 458 661 4.42e-45 172
Msa0814080 AT4G12020.11 50.820 61 29 1 414 474 467 526 9.52e-12 68.9
Msa0814080 AT2G44745.1 60.215 93 36 1 380 471 109 201 1.14e-33 128
Msa0814080 AT2G44745.1 59.649 57 22 1 238 293 145 201 1.66e-15 76.3
Msa0814080 AT4G39410.1 64.474 76 27 0 396 471 204 279 4.91e-28 114
Msa0814080 AT4G39410.1 46.575 73 36 2 224 293 207 279 2.52e-13 71.6
Msa0814080 AT1G55600.1 60.241 83 33 0 394 476 286 368 7.53e-28 117
Msa0814080 AT1G55600.1 57.627 59 24 1 239 296 308 366 3.90e-15 78.6
Msa0814080 AT1G29860.1 51.376 109 42 2 382 479 93 201 1.17e-26 110
Msa0814080 AT1G29860.1 50.667 75 35 2 238 311 136 209 5.03e-16 79.3
Msa0814080 AT4G18170.1 55.682 88 39 0 388 475 145 232 1.83e-26 110
Msa0814080 AT4G18170.1 39.286 140 82 3 238 375 172 310 2.13e-15 77.8
Msa0814080 AT3G01080.3 70.312 64 19 0 237 300 204 267 4.54e-26 109
Msa0814080 AT3G01080.3 59.091 66 26 1 415 480 205 269 8.00e-18 85.5
Msa0814080 AT1G69310.4 60.256 78 31 0 394 471 126 203 6.90e-26 108
Msa0814080 AT1G69310.4 54.386 57 25 1 238 293 147 203 1.65e-12 68.9
Msa0814080 AT1G69310.2 60.256 78 31 0 394 471 126 203 6.90e-26 108
Msa0814080 AT1G69310.2 54.386 57 25 1 238 293 147 203 1.65e-12 68.9
Msa0814080 AT1G69310.1 60.256 78 31 0 394 471 126 203 6.90e-26 108
Msa0814080 AT1G69310.1 54.386 57 25 1 238 293 147 203 1.65e-12 68.9
Msa0814080 AT1G64000.1 59.211 76 31 0 396 471 95 170 1.50e-25 104
Msa0814080 AT1G64000.1 56.897 58 24 1 238 294 114 171 6.89e-16 77.0
Msa0814080 AT5G41570.1 59.211 76 31 0 396 471 79 154 1.73e-25 103
Msa0814080 AT5G41570.1 56.897 58 24 1 238 294 98 155 1.69e-15 75.5
Msa0814080 AT5G13080.1 59.722 72 29 0 402 473 54 125 8.49e-25 100
Msa0814080 AT5G13080.1 52.381 63 29 1 238 299 67 129 2.89e-16 76.6
Msa0814080 AT5G26170.1 58.571 70 29 0 402 471 100 169 1.05e-24 101
Msa0814080 AT5G26170.1 54.386 57 25 1 238 293 113 169 1.75e-14 72.0
Msa0814080 AT5G49520.1 61.728 81 30 1 399 478 205 285 1.07e-24 107
Msa0814080 AT5G49520.1 54.688 64 28 1 238 300 221 284 6.90e-15 77.4
Msa0814080 AT5G46350.1 52.688 93 44 0 401 493 169 261 1.51e-24 105
Msa0814080 AT5G46350.1 51.389 72 34 1 230 300 175 246 3.07e-14 74.7
Msa0814080 AT2G46130.1 53.571 84 39 0 388 471 3 86 2.48e-24 98.2
Msa0814080 AT2G46130.1 60.345 58 22 1 238 294 30 87 7.86e-17 77.0
Msa0814080 AT2G47260.1 59.211 76 31 0 399 474 158 233 3.15e-24 104
Msa0814080 AT2G47260.1 53.125 64 29 1 238 300 174 237 5.58e-14 73.9
Msa0814080 AT1G62300.1 42.657 143 68 5 346 474 230 372 3.32e-24 107
Msa0814080 AT1G62300.1 51.667 60 27 2 239 296 313 372 7.40e-13 71.6
Msa0814080 AT4G04450.2 52.809 89 41 1 389 476 172 260 6.23e-24 105
Msa0814080 AT4G04450.2 45.205 73 38 2 239 309 199 271 2.22e-13 72.8
Msa0814080 AT3G01970.1 62.500 72 27 0 402 473 52 123 6.44e-24 98.6
Msa0814080 AT3G01970.1 56.897 58 22 2 238 293 65 121 1.37e-12 65.9
Msa0814080 AT5G15130.2 53.846 78 35 1 398 474 168 245 1.25e-23 105
Msa0814080 AT5G15130.2 44.595 74 39 2 238 309 185 258 4.77e-12 68.9
Msa0814080 AT5G64810.1 57.746 71 30 0 402 472 97 167 1.38e-23 99.0
Msa0814080 AT5G64810.1 50.877 57 27 1 238 293 110 166 1.43e-12 67.4
Msa0814080 AT5G15130.1 53.846 78 35 1 398 474 210 287 1.66e-23 105
Msa0814080 AT5G15130.1 44.595 74 39 2 238 309 227 300 4.97e-12 68.9
Msa0814080 AT4G04450.1 52.809 89 41 1 389 476 266 354 3.14e-23 103
Msa0814080 AT4G04450.1 45.205 73 38 2 239 309 293 365 3.46e-13 72.8
Msa0814080 AT4G22070.4 51.724 87 41 1 389 474 271 357 8.05e-23 102
Msa0814080 AT4G22070.4 51.667 60 27 2 239 296 298 357 6.64e-13 71.6
Msa0814080 AT4G22070.3 51.724 87 41 1 389 474 271 357 8.05e-23 102
Msa0814080 AT4G22070.3 51.667 60 27 2 239 296 298 357 6.64e-13 71.6
Msa0814080 AT4G22070.2 51.724 87 41 1 389 474 271 357 8.05e-23 102
Msa0814080 AT4G22070.2 51.667 60 27 2 239 296 298 357 6.64e-13 71.6
Msa0814080 AT4G22070.1 51.724 87 41 1 389 474 271 357 8.05e-23 102
Msa0814080 AT4G22070.1 51.667 60 27 2 239 296 298 357 6.64e-13 71.6
Msa0814080 AT1G68150.1 53.165 79 36 1 399 476 219 297 1.75e-22 100
Msa0814080 AT1G68150.1 54.098 61 26 2 238 296 235 295 1.55e-14 75.9
Msa0814080 AT1G18860.1 52.564 78 36 1 398 474 222 299 1.50e-21 99.0
Msa0814080 AT1G18860.1 52.459 61 27 2 238 296 239 299 2.10e-12 70.1
Msa0814080 AT1G69310.3 56.410 78 30 1 394 471 126 199 2.96e-21 94.7
Msa0814080 AT3G62340.1 47.525 101 43 1 399 499 102 192 7.13e-21 93.6
Msa0814080 AT3G62340.1 51.351 74 34 2 238 309 118 191 2.63e-14 73.9
Msa0814080 AT4G01720.1 54.545 77 34 1 399 474 223 299 1.15e-20 95.9
Msa0814080 AT4G01720.1 37.963 108 59 4 197 296 192 299 1.60e-12 70.5
Msa0814080 AT2G46130.2 50.000 84 38 1 388 471 3 82 8.90e-20 85.1
Msa0814080 AT2G46130.2 55.172 58 21 2 238 294 30 83 2.45e-12 63.9
Msa0814080 AT4G31550.1 55.128 78 31 2 396 472 230 304 1.43e-19 90.5
Msa0814080 AT4G31550.1 49.333 75 36 2 239 311 247 321 8.80e-14 73.2
Msa0814080 AT4G31550.2 55.128 78 31 2 396 472 229 303 1.53e-19 90.5
Msa0814080 AT4G31550.2 49.333 75 36 2 239 311 246 320 9.21e-14 73.2
Msa0814080 AT2G21900.1 50.000 76 35 1 404 476 95 170 1.54e-19 87.4
Msa0814080 AT2G21900.1 47.761 67 34 1 238 303 109 175 8.61e-14 70.9
Msa0814080 AT2G24570.1 57.143 77 29 2 396 471 227 300 1.93e-19 90.1
Msa0814080 AT2G24570.1 54.386 57 24 2 239 293 244 300 4.95e-13 70.9
Msa0814080 AT4G24240.1 52.500 80 37 1 395 473 261 340 2.16e-19 90.5
Msa0814080 AT2G23320.1 50.633 79 35 2 396 473 224 299 2.17e-19 89.7
Msa0814080 AT2G23320.1 54.386 57 24 2 239 293 241 297 1.95e-12 68.9
Msa0814080 AT4G31800.2 50.704 71 33 2 408 476 103 173 1.62e-18 85.9
Msa0814080 AT4G31800.2 33.607 122 77 4 203 322 77 196 4.23e-15 75.9
Msa0814080 AT1G80840.1 51.562 64 30 1 413 475 144 207 2.47e-18 86.3
Msa0814080 AT1G80840.1 55.000 60 25 2 239 296 147 206 2.07e-14 74.7
Msa0814080 AT4G31800.1 50.704 71 33 2 408 476 168 238 3.27e-18 86.3
Msa0814080 AT4G31800.1 33.607 122 77 4 203 322 142 261 6.82e-15 76.3
Msa0814080 AT5G28650.1 50.649 77 37 1 396 471 243 319 1.39e-17 84.7
Msa0814080 AT5G28650.1 54.237 59 25 2 239 295 263 321 1.41e-12 69.7
Msa0814080 AT5G43290.1 43.434 99 38 2 391 471 72 170 1.54e-17 83.6
Msa0814080 AT5G43290.1 63.793 58 20 1 237 293 113 170 5.19e-16 79.0
Msa0814080 AT2G25000.2 50.000 64 31 1 414 476 102 165 1.77e-17 82.4
Msa0814080 AT2G25000.2 36.283 113 65 4 210 320 78 185 8.90e-13 68.6
Msa0814080 AT2G25000.4 50.000 64 31 1 414 476 102 165 1.77e-17 82.4
Msa0814080 AT2G25000.4 36.283 113 65 4 210 320 78 185 8.90e-13 68.6
Msa0814080 AT2G25000.3 50.000 64 31 1 414 476 124 187 3.78e-17 82.0
Msa0814080 AT2G25000.3 41.667 84 45 3 239 320 126 207 1.28e-12 68.6
Msa0814080 AT3G04670.1 50.649 77 37 1 396 471 243 319 4.06e-17 83.2
Msa0814080 AT3G04670.1 52.542 59 26 2 239 295 263 321 1.88e-12 69.3
Msa0814080 AT2G25000.1 50.000 64 31 1 414 476 145 208 5.22e-17 82.0
Msa0814080 AT2G25000.1 41.667 84 45 3 239 320 147 228 1.91e-12 68.6
Msa0814080 AT2G30590.1 51.948 77 36 1 396 471 294 370 7.31e-17 83.2
Msa0814080 AT2G30590.1 55.932 59 24 2 239 295 314 372 3.59e-13 72.0
Msa0814080 AT1G69810.2 46.835 79 40 2 398 474 128 206 7.32e-17 82.4
Msa0814080 AT1G69810.1 46.835 79 40 2 398 474 186 264 9.81e-17 82.8
Msa0814080 AT4G23550.1 44.156 77 42 1 404 479 129 205 4.55e-15 77.0
Msa0814080 AT5G52830.1 40.404 99 56 3 396 492 147 244 1.12e-13 73.2
Msa0814080 AT5G52830.1 44.048 84 43 3 237 318 164 245 1.34e-12 69.7
Msa0814080 AT1G29280.1 50.000 60 29 1 416 474 75 134 1.27e-13 71.6
Msa0814080 AT1G29280.1 50.000 60 28 2 239 296 75 134 3.45e-11 64.3
Msa0814080 AT4G01250.1 50.769 65 31 1 416 479 129 193 1.37e-13 72.4
Msa0814080 AT5G24110.1 38.182 110 51 3 229 334 104 200 4.26e-13 70.9
Msa0814080 AT2G40740.1 36.283 113 52 4 362 470 135 231 1.40e-12 68.9
Msa0814080 AT2G40740.1 33.884 121 66 6 238 353 173 284 1.03e-11 66.6
Msa0814080 AT3G58710.2 48.387 62 31 1 416 476 71 132 1.53e-12 68.6
Msa0814080 AT3G58710.2 42.105 76 42 2 239 312 71 146 4.40e-11 64.3
Msa0814080 AT3G58710.1 48.387 62 31 1 416 476 72 133 1.55e-12 68.6
Msa0814080 AT3G58710.1 42.105 76 42 2 239 312 72 147 4.61e-11 64.3
Msa0814080 AT2G40740.3 36.607 112 51 4 362 469 144 239 1.72e-12 68.9
Msa0814080 AT2G40740.3 33.884 121 66 6 238 353 182 293 1.33e-11 66.2
Msa0814080 AT2G34830.2 37.624 101 54 2 378 477 195 287 2.84e-12 69.3
Msa0814080 AT2G34830.1 37.624 101 54 2 378 477 186 278 3.17e-12 69.3
Msa0814080 AT1G30650.1 37.624 101 54 2 378 477 188 280 4.11e-12 68.9
Msa0814080 AT4G23810.1 45.588 68 33 2 229 292 149 216 5.60e-11 64.7
Msa0814080 AT4G11070.2 45.588 68 31 3 229 291 100 166 6.28e-11 63.9
Msa0814080 AT2G46400.1 42.308 78 38 3 238 308 104 181 7.13e-11 63.9
Msa0814080 AT5G45050.4 46.154 65 34 1 416 479 1042 1106 7.64e-11 65.9
Msa0814080 AT5G45050.1 46.154 65 34 1 416 479 1181 1245 7.84e-11 65.9
Msa0814080 AT4G11070.1 45.588 68 31 3 229 291 132 198 8.10e-11 63.9
Msa0814080 AT5G45050.2 46.154 65 34 1 416 479 1153 1217 8.22e-11 65.9

Find 163 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGGAAGGTTGGAAATTT+TGG 0.123460 5_3:-45862496 Msa0814080:three_prime_UTR
TTGCTGTGGTTGCTGGTAAT+TGG 0.244026 5_3:+45864466 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5_3:-45864285 Msa0814080:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5_3:+45862560 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.295221 5_3:-45864410 Msa0814080:CDS
GAGTGGGTTGCTGTGGTTGC+TGG 0.297812 5_3:+45864459 None:intergenic
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5_3:+45862776 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.301577 5_3:-45862608 Msa0814080:CDS
AACGTGCCTCACATGATTTA+AGG 0.307899 5_3:-45862904 Msa0814080:CDS
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5_3:+45864332 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5_3:-45862686 Msa0814080:CDS
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5_3:+45863664 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5_3:+45865903 None:intergenic
CATTAGTTTGTGGCTTCTCT+TGG 0.329118 5_3:-45862296 Msa0814080:three_prime_UTR
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5_3:+45862696 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5_3:+45865150 None:intergenic
CTCCTTGTACATTGAGGCTT+AGG 0.340959 5_3:+45864248 None:intergenic
GGCTTCTCTTGGCTTTAGTT+AGG 0.341641 5_3:-45862285 Msa0814080:three_prime_UTR
CATATCATTTGTGGGTTGAT+TGG 0.343648 5_3:-45862252 Msa0814080:three_prime_UTR
GGTTACAGATGGAGGAAATA+TGG 0.355775 5_3:-45863592 Msa0814080:CDS
TGTATCCATCGTCGGATCTT+CGG 0.356795 5_3:+45864426 None:intergenic
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5_3:-45865229 Msa0814080:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5_3:+45862757 None:intergenic
TGATCATGGATTTCGTTAAT+CGG 0.366115 5_3:+45864179 None:intergenic
TGGATGTAGTTAACCGCATT+TGG 0.369998 5_3:-45862232 Msa0814080:three_prime_UTR
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5_3:+45865151 None:intergenic
GTTTCATGTTGTCAAAGGTT+TGG 0.373131 5_3:+45862092 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5_3:+45862932 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5_3:+45865837 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5_3:+45862794 None:intergenic
TTGGCATGTGCGATCAAGAT+TGG 0.381138 5_3:-45862213 Msa0814080:three_prime_UTR
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5_3:+45862785 None:intergenic
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5_3:-45863575 Msa0814080:CDS
TGCTGCTGTTGATTCATGTA+TGG 0.408093 5_3:+45862635 None:intergenic
TTCAGCAAAGCAAAGATTCA+AGG 0.408387 5_3:+45862543 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5_3:-45865888 Msa0814080:CDS
CATAAGAAAGAGAAGAGAAA+AGG 0.414080 5_3:+45866142 None:intergenic
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5_3:+45864323 None:intergenic
ATCGTCGGATCTTCGGCTTA+AGG 0.424454 5_3:+45864433 None:intergenic
GAGAATTCTTCAATATCAAT+AGG 0.435077 5_3:-45864107 Msa0814080:CDS
TATACAGGATGGGTTTGGTT+TGG 0.435210 5_3:-45862374 Msa0814080:three_prime_UTR
GGCTGTGATCACAACTTATG+AGG 0.435418 5_3:-45862882 Msa0814080:CDS
CTTGTAAAGTTTATACAGGA+TGG 0.438119 5_3:-45862385 Msa0814080:three_prime_UTR
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5_3:-45864393 Msa0814080:CDS
AGAGAGCTTCATATCATTTG+TGG 0.440666 5_3:-45862261 Msa0814080:three_prime_UTR
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5_3:+45865248 None:intergenic
TTAGTAGATACATGGAAGGT+TGG 0.446487 5_3:-45862505 Msa0814080:three_prime_UTR
ATTTCGTTAATCGGATCAAC+AGG 0.446654 5_3:+45864188 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5_3:+45865930 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5_3:+45865927 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5_3:-45862842 Msa0814080:CDS
CTCACGGTTTGATAATCAAA+TGG 0.447700 5_3:-45862660 Msa0814080:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5_3:+45865858 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5_3:-45865980 Msa0814080:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5_3:-45864392 Msa0814080:CDS
AAATCCATTGTTAGTGATGT+TGG 0.462800 5_3:+45864502 None:intergenic
GTTACTGAGATAGTTTATAA+GGG 0.464337 5_3:-45864284 Msa0814080:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5_3:+45862839 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5_3:-45862702 Msa0814080:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5_3:-45862903 Msa0814080:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5_3:-45864312 Msa0814080:CDS
AAGTTTATACAGGATGGGTT+TGG 0.467623 5_3:-45862379 Msa0814080:three_prime_UTR
CACCACCAGATCGACTCCTT+TGG 0.467879 5_3:+45864054 None:intergenic
GAGAAAGTTGTTGACATGAA+AGG 0.468026 5_3:+45866035 None:intergenic
GTGAGAATCCATAATTTCCT+TGG 0.468688 5_3:+45862678 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5_3:+45865894 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.472866 5_3:+45864110 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5_3:+45862800 None:intergenic
AGAAAGTTGTTGACATGAAA+GGG 0.475176 5_3:+45866036 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5_3:+45864333 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5_3:+45862816 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5_3:-45863574 Msa0814080:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5_3:-45863620 Msa0814080:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5_3:+45862923 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5_3:-45865107 Msa0814080:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5_3:-45862772 Msa0814080:CDS
GCAGCAGCAACAACAACAAA+TGG 0.490866 5_3:-45862618 Msa0814080:CDS
GAGAGCTTCATATCATTTGT+GGG 0.491399 5_3:-45862260 Msa0814080:three_prime_UTR
ATTTGGTTTCATGTTGTCAA+AGG 0.496915 5_3:+45862087 None:intergenic
GTTTGAACACTAGCAATCTC+AGG 0.510377 5_3:+45864524 None:intergenic
TGTCCTTGAGGTGCTTGTTG+TGG 0.510790 5_3:+45862731 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.512302 5_3:+45862580 None:intergenic
CTTCGGCTTAAGGTTTGAGT+GGG 0.513445 5_3:+45864443 None:intergenic
GATCCGACGATGGATACAAT+TGG 0.516722 5_3:-45864421 Msa0814080:CDS
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5_3:+45862786 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5_3:+45862704 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5_3:-45864155 Msa0814080:CDS
ATAAGAAAGAGAAGAGAAAA+GGG 0.518787 5_3:+45866143 None:intergenic
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5_3:-45862695 Msa0814080:CDS
GTGATGCATATGATTGATCA+TGG 0.523389 5_3:+45864165 None:intergenic
CACGAGCAGCGGGGACATCA+TGG 0.524422 5_3:+45862849 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5_3:-45864050 Msa0814080:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5_3:-45864147 Msa0814080:CDS
TTTGATGTTGAGAAATGGAA+GGG 0.527284 5_3:+45866203 None:intergenic
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5_3:+45862933 None:intergenic
TTGTAAAGTTTATACAGGAT+GGG 0.534317 5_3:-45862384 Msa0814080:three_prime_UTR
GTTGTCTGAACTACAACTCT+AGG 0.534551 5_3:+45863640 None:intergenic
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5_3:-45864059 Msa0814080:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5_3:+45863602 None:intergenic
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5_3:-45864311 Msa0814080:CDS
ATCCTAAGCCTCAATGTACA+AGG 0.543388 5_3:-45864250 Msa0814080:CDS
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5_3:+45865137 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5_3:-45862848 Msa0814080:CDS
CCGTCTGTCTTGATCTTGAT+CGG 0.554098 5_3:-45862120 Msa0814080:three_prime_UTR
AAGGTTTGAGTGGGTTGCTG+TGG 0.556153 5_3:+45864452 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5_3:+45865870 None:intergenic
TCGCCAATTGTATCCATCGT+CGG 0.560621 5_3:+45864418 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5_3:+45865931 None:intergenic
TCTTCGGCTTAAGGTTTGAG+TGG 0.561695 5_3:+45864442 None:intergenic
GTGCATTTGTAGTAACTCCT+CGG 0.563360 5_3:+45864359 None:intergenic
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5_3:+45865118 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5_3:-45865212 Msa0814080:CDS
GGGGAATCTGCAAATGAGAA+AGG 0.570197 5_3:-45865192 Msa0814080:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5_3:-45865213 Msa0814080:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5_3:+45865254 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5_3:+45865932 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5_3:-45863603 Msa0814080:CDS
CAAACCAACATCACTAACAA+TGG 0.577819 5_3:-45864506 Msa0814080:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5_3:+45862838 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5_3:-45865979 Msa0814080:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5_3:+45865904 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5_3:-45864070 Msa0814080:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5_3:-45864216 Msa0814080:CDS
AAGGAAATTATGGATTCTCA+CGG 0.588338 5_3:-45862676 Msa0814080:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5_3:-45864643 Msa0814080:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5_3:-45862780 Msa0814080:CDS
GACATTGATATCCTGGATGA+TGG 0.594877 5_3:-45863613 Msa0814080:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5_3:+45865906 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5_3:-45864010 Msa0814080:intron
CATGTGCGATCAAGATTGGA+CGG 0.601440 5_3:-45862209 Msa0814080:three_prime_UTR
AGAAAGAGAAGAGAAAAGGG+TGG 0.602299 5_3:+45866146 None:intergenic
TGTGGCCTCTGACTCTGAAG+AGG 0.602459 5_3:+45862749 None:intergenic
GCATAACAGGAGAATCAAGA+AGG 0.606162 5_3:+45865850 None:intergenic
GCTGTGATCACAACTTATGA+GGG 0.608949 5_3:-45862881 Msa0814080:CDS
AACCCTTCAAATCCAAACAA+TGG 0.610392 5_3:-45862788 Msa0814080:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5_3:-45863558 Msa0814080:intron
TGGATGATGGTTACAGATGG+AGG 0.611243 5_3:-45863600 Msa0814080:CDS
GAGTTTCTCCTTGTACATTG+AGG 0.612279 5_3:+45864242 None:intergenic
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5_3:+45865859 None:intergenic
TTGATGTTGAGAAATGGAAG+GGG 0.618038 5_3:+45866204 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5_3:-45864056 Msa0814080:CDS
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5_3:-45862754 Msa0814080:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5_3:+45862719 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5_3:+45865996 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5_3:-45864030 Msa0814080:CDS
AGGCCACAACAAGCACCTCA+AGG 0.634387 5_3:-45862734 Msa0814080:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5_3:-45865978 Msa0814080:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5_3:+45865905 None:intergenic
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5_3:-45864021 Msa0814080:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5_3:+45862898 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5_3:+45865933 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5_3:-45862701 Msa0814080:CDS
CCGATCAAGATCAAGACAGA+CGG 0.665097 5_3:+45862120 None:intergenic
AATTCTTCAATATCAATAGG+TGG 0.674879 5_3:-45864104 Msa0814080:CDS
TTGATCGCACATGCCAAATG+CGG 0.675232 5_3:+45862219 None:intergenic
TTAAGGGAAGTGAAAATCCG+AGG 0.680545 5_3:-45864376 Msa0814080:CDS
GATCAATCATATGCATCACA+TGG 0.681918 5_3:-45864161 Msa0814080:CDS
CTGTGATCACAACTTATGAG+GGG 0.693115 5_3:-45862880 Msa0814080:CDS
TTAAGCCGAAGATCCGACGA+TGG 0.699822 5_3:-45864431 Msa0814080:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5_3:-45865211 Msa0814080:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5_3:+45865873 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5_3:+45862840 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5_3:-45862937 Msa0814080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATGAAACAAAAATA+GGG + chr5_3:45862558-45862577 None:intergenic 10.0%
!! AAAAAATATGAAACAAAAAT+AGG + chr5_3:45862559-45862578 None:intergenic 10.0%
!!! ATTTATTTTTAATCAATTGA+AGG - chr5_3:45862944-45862963 Msa0814080:CDS 10.0%
!!! TAATTTTACATAAAATTTTC+AGG - chr5_3:45864624-45864643 Msa0814080:CDS 10.0%
!!! TTTTTTTTTGTTTTTGGTTT+TGG + chr5_3:45862175-45862194 None:intergenic 15.0%
!!! TGAAGTTTTTTTTTTGTTTT+TGG + chr5_3:45862181-45862200 None:intergenic 15.0%
!!! TTTATGTTATTTTTTGACAT+GGG - chr5_3:45862623-45862642 Msa0814080:CDS 15.0%
!!! TGCTTTAGTTTTTTTTTTTT+TGG - chr5_3:45862980-45862999 Msa0814080:intron 15.0%
!! CTCATATATTTATTATATTG+TGG - chr5_3:45864524-45864543 Msa0814080:CDS 15.0%
!!! TTGATGTAATTTTTATTTGA+TGG - chr5_3:45864595-45864614 Msa0814080:CDS 15.0%
!!! AGATTTTATGATTTGAATTA+TGG + chr5_3:45866204-45866223 None:intergenic 15.0%
!! ATATAAAGAGAGAGAAAAAT+GGG + chr5_3:45862120-45862139 None:intergenic 20.0%
!! AATATAAAGAGAGAGAAAAA+TGG + chr5_3:45862121-45862140 None:intergenic 20.0%
!!! AAAATTTTGATGTTGAGAAA+TGG + chr5_3:45862152-45862171 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG - chr5_3:45862368-45862387 Msa0814080:three_prime_UTR 20.0%
!! AAAATGAAAGAAACTAACAT+TGG + chr5_3:45862532-45862551 None:intergenic 20.0%
!!! CTTTATGTTATTTTTTGACA+TGG - chr5_3:45862622-45862641 Msa0814080:CDS 20.0%
!!! TTTTCATCATCTATGTTTTA+TGG - chr5_3:45862656-45862675 Msa0814080:CDS 20.0%
!!! TTTCATCATCTATGTTTTAT+GGG - chr5_3:45862657-45862676 Msa0814080:CDS 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - chr5_3:45862896-45862915 Msa0814080:CDS 20.0%
!! GCAATAAATGCTTAAAAAAT+TGG + chr5_3:45863287-45863306 None:intergenic 20.0%
!! GAGATTAAAAAAATTGAAGT+TGG - chr5_3:45863382-45863401 Msa0814080:intron 20.0%
!! AAAACATGGAATCATATTTA+TGG + chr5_3:45864394-45864413 None:intergenic 20.0%
!! TTAAGAACTTCAATAAAACA+TGG + chr5_3:45864408-45864427 None:intergenic 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG - chr5_3:45864635-45864654 Msa0814080:CDS 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG + chr5_3:45864803-45864822 None:intergenic 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG + chr5_3:45864809-45864828 None:intergenic 20.0%
!! AGAAATAACCAAATTAGAAA+AGG + chr5_3:45865087-45865106 None:intergenic 20.0%
!!! TTTCTAATTTGGTTATTTCT+TGG - chr5_3:45865087-45865106 Msa0814080:intron 20.0%
!!! TTTCATTTTTAGTAGATACA+TGG - chr5_3:45865834-45865853 Msa0814080:intron 20.0%
!! CAAAAAACAAATGCAATAAA+TGG + chr5_3:45865927-45865946 None:intergenic 20.0%
!!! CATTTATTGCATTTGTTTTT+TGG - chr5_3:45865925-45865944 Msa0814080:CDS 20.0%
!!! TTTTCTTGTAAAGTTTATAC+AGG - chr5_3:45865958-45865977 Msa0814080:CDS 20.0%
!!! CATTTTTTTTCATTAGTTTG+TGG - chr5_3:45866041-45866060 Msa0814080:CDS 20.0%
! ATAAGAAAGAGAAGAGAAAA+GGG + chr5_3:45862207-45862226 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - chr5_3:45862367-45862386 Msa0814080:three_prime_UTR 25.0%
! GATGATAATAACAATTCAAG+GGG - chr5_3:45862369-45862388 Msa0814080:three_prime_UTR 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - chr5_3:45862699-45862718 Msa0814080:CDS 25.0%
!!! AGATTGTTCTTTTTTGTGTT+TGG - chr5_3:45862771-45862790 Msa0814080:CDS 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + chr5_3:45862862-45862881 None:intergenic 25.0%
! TAATGCTGTTACTGAATTTA+TGG - chr5_3:45863027-45863046 Msa0814080:intron 25.0%
! AATGCTGTTACTGAATTTAT+GGG - chr5_3:45863028-45863047 Msa0814080:intron 25.0%
! TTAAGCATTTATTGCATGTT+TGG - chr5_3:45863292-45863311 Msa0814080:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG + chr5_3:45863603-45863622 None:intergenic 25.0%
!!! GTTGATCACATTATTTTTGT+TGG + chr5_3:45863609-45863628 None:intergenic 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG - chr5_3:45863636-45863655 Msa0814080:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG + chr5_3:45863640-45863659 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG - chr5_3:45864062-45864081 Msa0814080:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG - chr5_3:45864063-45864082 Msa0814080:CDS 25.0%
! ATTGATATTGAAGAATTCTC+AGG + chr5_3:45864240-45864259 None:intergenic 25.0%
! GAGAATTCTTCAATATCAAT+AGG - chr5_3:45864240-45864259 Msa0814080:CDS 25.0%
! AATTCTTCAATATCAATAGG+TGG - chr5_3:45864243-45864262 Msa0814080:CDS 25.0%
!! TGCATTTTACTTCAACATAA+AGG + chr5_3:45864467-45864486 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - chr5_3:45864466-45864485 Msa0814080:CDS 25.0%
! AAAAATGAAGGTGAAAATGA+GGG - chr5_3:45864647-45864666 Msa0814080:intron 25.0%
!! TTAATTTGAGTATCCAATGA+TGG - chr5_3:45864887-45864906 Msa0814080:intron 25.0%
! TATTTGTAAACTGCAATCAT+GGG + chr5_3:45864924-45864943 None:intergenic 25.0%
! ATATTTGTAAACTGCAATCA+TGG + chr5_3:45864925-45864944 None:intergenic 25.0%
! AAATATTACCTAGTCAAATG+TGG - chr5_3:45864939-45864958 Msa0814080:intron 25.0%
!! ATTTGTTCTCTATCTGTTTT+AGG - chr5_3:45864991-45865010 Msa0814080:intron 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - chr5_3:45865022-45865041 Msa0814080:intron 25.0%
!! GTGTTTAATTTATGACTTGT+AGG - chr5_3:45865371-45865390 Msa0814080:intron 25.0%
!!! ATTTTTAGTAGATACATGGA+AGG - chr5_3:45865838-45865857 Msa0814080:CDS 25.0%
! TTGTAAAGTTTATACAGGAT+GGG - chr5_3:45865963-45865982 Msa0814080:CDS 25.0%
!!! CTTTTATTTTCCAATACACA+AGG - chr5_3:45866010-45866029 Msa0814080:CDS 25.0%
TTTGATGTTGAGAAATGGAA+GGG + chr5_3:45862147-45862166 None:intergenic 30.0%
! TTTTGATGTTGAGAAATGGA+AGG + chr5_3:45862148-45862167 None:intergenic 30.0%
CATAAGAAAGAGAAGAGAAA+AGG + chr5_3:45862208-45862227 None:intergenic 30.0%
! CTTTTCTCTTCTCTTTCTTA+TGG - chr5_3:45862206-45862225 Msa0814080:three_prime_UTR 30.0%
AGAAAGTTGTTGACATGAAA+GGG + chr5_3:45862314-45862333 None:intergenic 30.0%
TGCTAAGAAAAGTTTGAACA+AGG - chr5_3:45862816-45862835 Msa0814080:CDS 30.0%
GCTAAGAAAAGTTTGAACAA+GGG - chr5_3:45862817-45862836 Msa0814080:CDS 30.0%
AATTGGATGAACAATTCTGA+GGG - chr5_3:45863135-45863154 Msa0814080:intron 30.0%
TGATGATTGAAAAGTTGTTG+TGG + chr5_3:45863232-45863251 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - chr5_3:45863237-45863256 Msa0814080:intron 30.0%
TGTAGTCAGTACATTATTGA+CGG - chr5_3:45863436-45863455 Msa0814080:intron 30.0%
TTCAAAACATCGATGATCAT+TGG + chr5_3:45863562-45863581 None:intergenic 30.0%
AAATCCATTGTTAGTGATGT+TGG + chr5_3:45863848-45863867 None:intergenic 30.0%
ATATGGACAAAAGCAAGTTA+AGG - chr5_3:45863954-45863973 Msa0814080:intron 30.0%
TATGGACAAAAGCAAGTTAA+GGG - chr5_3:45863955-45863974 Msa0814080:intron 30.0%
AAAGTTGAGAGATCAATTGA+GGG - chr5_3:45864036-45864055 Msa0814080:CDS 30.0%
TGATCATGGATTTCGTTAAT+CGG + chr5_3:45864171-45864190 None:intergenic 30.0%
AAGTTCTTAAATTGCTGATG+CGG - chr5_3:45864418-45864437 Msa0814080:CDS 30.0%
GAAAAATGAAGGTGAAAATG+AGG - chr5_3:45864646-45864665 Msa0814080:intron 30.0%
ATATGGACAGAAAGTTGTTA+AGG - chr5_3:45864772-45864791 Msa0814080:intron 30.0%
TATGGACAGAAAGTTGTTAA+GGG - chr5_3:45864773-45864792 Msa0814080:intron 30.0%
! ACTTTTTACCACATTTGACT+AGG + chr5_3:45864950-45864969 None:intergenic 30.0%
!! CTTTTTGGAAACTCTACTAT+AGG - chr5_3:45865037-45865056 Msa0814080:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + chr5_3:45865074-45865093 None:intergenic 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - chr5_3:45865076-45865095 Msa0814080:intron 30.0%
TAACCAAATTAGAAAAGGCA+AGG + chr5_3:45865082-45865101 None:intergenic 30.0%
!! GGTTATTTCTTGGTCAAATT+TGG - chr5_3:45865097-45865116 Msa0814080:CDS 30.0%
AAGGAAATTATGGATTCTCA+CGG - chr5_3:45865671-45865690 Msa0814080:intron 30.0%
!!! GCATTTGTTTTTTGGATGTT+TGG - chr5_3:45865933-45865952 Msa0814080:CDS 30.0%
CTTGTAAAGTTTATACAGGA+TGG - chr5_3:45865962-45865981 Msa0814080:CDS 30.0%
TTGATGTTGAGAAATGGAAG+GGG + chr5_3:45862146-45862165 None:intergenic 35.0%
GAGAAAGTTGTTGACATGAA+AGG + chr5_3:45862315-45862334 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + chr5_3:45862446-45862465 None:intergenic 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + chr5_3:45862447-45862466 None:intergenic 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + chr5_3:45862456-45862475 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + chr5_3:45862513-45862532 None:intergenic 35.0%
CAATTGGATGAACAATTCTG+AGG - chr5_3:45863134-45863153 Msa0814080:intron 35.0%
ATTGGATGAACAATTCTGAG+GGG - chr5_3:45863136-45863155 Msa0814080:intron 35.0%
! TCTTTTCAAACCCAACAACA+AGG - chr5_3:45863186-45863205 Msa0814080:intron 35.0%
! CTTTTCAAACCCAACAACAA+GGG - chr5_3:45863187-45863206 Msa0814080:intron 35.0%
TTTCAATCATCAACTGTTGG+TGG - chr5_3:45863240-45863259 Msa0814080:intron 35.0%
CAAACCAACATCACTAACAA+TGG - chr5_3:45863841-45863860 Msa0814080:intron 35.0%
GGATACAATTGGCGAAAATA+TGG - chr5_3:45863937-45863956 Msa0814080:intron 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + chr5_3:45864017-45864036 None:intergenic 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + chr5_3:45864018-45864037 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + chr5_3:45864027-45864046 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG - chr5_3:45864035-45864054 Msa0814080:CDS 35.0%
ATTTCGTTAATCGGATCAAC+AGG + chr5_3:45864162-45864181 None:intergenic 35.0%
GTGATGCATATGATTGATCA+TGG + chr5_3:45864185-45864204 None:intergenic 35.0%
GATCAATCATATGCATCACA+TGG - chr5_3:45864186-45864205 Msa0814080:CDS 35.0%
TCATATGCATCACATGGTAA+TGG - chr5_3:45864192-45864211 Msa0814080:CDS 35.0%
!! ATCACATGGTAATGGACAAA+TGG - chr5_3:45864200-45864219 Msa0814080:CDS 35.0%
! TGGTGATGAATTTGATGAAG+AGG - chr5_3:45864317-45864336 Msa0814080:CDS 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + chr5_3:45864345-45864364 None:intergenic 35.0%
AACAAGTGACATTGATATCC+TGG - chr5_3:45864727-45864746 Msa0814080:intron 35.0%
TTAAGGGAAATCCAAATCCA+AGG - chr5_3:45864789-45864808 Msa0814080:intron 35.0%
ATAAAACACCGACACAGAAA+CGG + chr5_3:45865324-45865343 None:intergenic 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + chr5_3:45865556-45865575 None:intergenic 35.0%
AACCCTTCAAATCCAAACAA+TGG - chr5_3:45865559-45865578 Msa0814080:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + chr5_3:45865564-45865583 None:intergenic 35.0%
AAATCCAAACAATGGAGCAA+TGG - chr5_3:45865567-45865586 Msa0814080:intron 35.0%
GTGAGAATCCATAATTTCCT+TGG + chr5_3:45865672-45865691 None:intergenic 35.0%
! CTCACGGTTTGATAATCAAA+TGG - chr5_3:45865687-45865706 Msa0814080:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - chr5_3:45865739-45865758 Msa0814080:intron 35.0%
TCAAGGAACATGTCATCTTT+AGG + chr5_3:45865790-45865809 None:intergenic 35.0%
TTCAGCAAAGCAAAGATTCA+AGG + chr5_3:45865807-45865826 None:intergenic 35.0%
TTAGTAGATACATGGAAGGT+TGG - chr5_3:45865842-45865861 Msa0814080:CDS 35.0%
! ACATGGAAGGTTGGAAATTT+TGG - chr5_3:45865851-45865870 Msa0814080:CDS 35.0%
!! AGGTTGGAAATTTTGGAAAG+TGG - chr5_3:45865858-45865877 Msa0814080:CDS 35.0%
!! GGTTGGAAATTTTGGAAAGT+GGG - chr5_3:45865859-45865878 Msa0814080:CDS 35.0%
!! AAATTTTGGAAAGTGGGTCT+AGG - chr5_3:45865865-45865884 Msa0814080:CDS 35.0%
! AAGTTTATACAGGATGGGTT+TGG - chr5_3:45865968-45865987 Msa0814080:CDS 35.0%
TGCACAAAAACCTTGTGTAT+TGG + chr5_3:45866023-45866042 None:intergenic 35.0%
AGAGAGCTTCATATCATTTG+TGG - chr5_3:45866086-45866105 Msa0814080:CDS 35.0%
GAGAGCTTCATATCATTTGT+GGG - chr5_3:45866087-45866106 Msa0814080:CDS 35.0%
!! CATATCATTTGTGGGTTGAT+TGG - chr5_3:45866095-45866114 Msa0814080:CDS 35.0%
AGAAAGAGAAGAGAAAAGGG+TGG + chr5_3:45862204-45862223 None:intergenic 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG + chr5_3:45862399-45862418 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + chr5_3:45862444-45862463 None:intergenic 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + chr5_3:45862445-45862464 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - chr5_3:45862459-45862478 Msa0814080:three_prime_UTR 40.0%
GCATAACAGGAGAATCAAGA+AGG + chr5_3:45862500-45862519 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG - chr5_3:45863087-45863106 Msa0814080:intron 40.0%
CTGCTCAAAGCAACTACAAT+TGG - chr5_3:45863118-45863137 Msa0814080:intron 40.0%
GACTGTCCAATCTAGACTAA+TGG + chr5_3:45863463-45863482 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG - chr5_3:45863704-45863723 Msa0814080:CDS 40.0%
GTTTGAACACTAGCAATCTC+AGG + chr5_3:45863826-45863845 None:intergenic 40.0%
TTAAGGGAAGTGAAAATCCG+AGG - chr5_3:45863971-45863990 Msa0814080:intron 40.0%
GTGCATTTGTAGTAACTCCT+CGG + chr5_3:45863991-45864010 None:intergenic 40.0%
ATCCTAAGCCTCAATGTACA+AGG - chr5_3:45864097-45864116 Msa0814080:CDS 40.0%
GAGTTTCTCCTTGTACATTG+AGG + chr5_3:45864108-45864127 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - chr5_3:45864131-45864150 Msa0814080:CDS 40.0%
ATTTGATGAAGAGGAACCTG+AGG - chr5_3:45864326-45864345 Msa0814080:CDS 40.0%
AAGTAAAATGCAGGCTGATG+AGG - chr5_3:45864475-45864494 Msa0814080:CDS 40.0%
GTTGTCTGAACTACAACTCT+AGG + chr5_3:45864710-45864729 None:intergenic 40.0%
GACATTGATATCCTGGATGA+TGG - chr5_3:45864734-45864753 Msa0814080:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - chr5_3:45864755-45864774 Msa0814080:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + chr5_3:45865068-45865087 None:intergenic 40.0%
CGACATGACACTGACAAATA+TGG - chr5_3:45865217-45865236 Msa0814080:CDS 40.0%
ACACAGAAACGGACATAACA+TGG + chr5_3:45865313-45865332 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG - chr5_3:45865313-45865332 Msa0814080:intron 40.0%
AACGTGCCTCACATGATTTA+AGG - chr5_3:45865443-45865462 Msa0814080:intron 40.0%
ACGTGCCTCACATGATTTAA+GGG - chr5_3:45865444-45865463 Msa0814080:intron 40.0%
GCTGTGATCACAACTTATGA+GGG - chr5_3:45865466-45865485 Msa0814080:intron 40.0%
CTGTGATCACAACTTATGAG+GGG - chr5_3:45865467-45865486 Msa0814080:intron 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + chr5_3:45865550-45865569 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + chr5_3:45865565-45865584 None:intergenic 40.0%
TTGAATGGTGATTGTCCTTG+AGG + chr5_3:45865631-45865650 None:intergenic 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + chr5_3:45865646-45865665 None:intergenic 40.0%
ATTCAACCTTCAAATGCTGC+AGG - chr5_3:45865645-45865664 Msa0814080:intron 40.0%
TTCAACCTTCAAATGCTGCA+GGG - chr5_3:45865646-45865665 Msa0814080:intron 40.0%
!! TGCTGCTGTTGATTCATGTA+TGG + chr5_3:45865715-45865734 None:intergenic 40.0%
!!! TGGTTTTTCCTCTAGAGCTA+AGG - chr5_3:45865759-45865778 Msa0814080:intron 40.0%
! TATACAGGATGGGTTTGGTT+TGG - chr5_3:45865973-45865992 Msa0814080:CDS 40.0%
!! CATTAGTTTGTGGCTTCTCT+TGG - chr5_3:45866051-45866070 Msa0814080:CDS 40.0%
TGGATGTAGTTAACCGCATT+TGG - chr5_3:45866115-45866134 Msa0814080:CDS 40.0%
TCATCTGAAGAAGCAGCAGA+AGG + chr5_3:45862354-45862373 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + chr5_3:45862418-45862437 None:intergenic 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + chr5_3:45862419-45862438 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + chr5_3:45862491-45862510 None:intergenic 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG + chr5_3:45863096-45863115 None:intergenic 45.0%
GGGGAATCTGCAAATGAGAA+AGG - chr5_3:45863155-45863174 Msa0814080:intron 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - chr5_3:45863454-45863473 Msa0814080:intron 45.0%
TTGCTGTGGTTGCTGGTAAT+TGG + chr5_3:45863884-45863903 None:intergenic 45.0%
CTTCGGCTTAAGGTTTGAGT+GGG + chr5_3:45863907-45863926 None:intergenic 45.0%
TCTTCGGCTTAAGGTTTGAG+TGG + chr5_3:45863908-45863927 None:intergenic 45.0%
TGTATCCATCGTCGGATCTT+CGG + chr5_3:45863924-45863943 None:intergenic 45.0%
GATCCGACGATGGATACAAT+TGG - chr5_3:45863926-45863945 Msa0814080:intron 45.0%
TCGCCAATTGTATCCATCGT+CGG + chr5_3:45863932-45863951 None:intergenic 45.0%
CTCCTTGTACATTGAGGCTT+AGG + chr5_3:45864102-45864121 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - chr5_3:45864277-45864296 Msa0814080:CDS 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - chr5_3:45864337-45864356 Msa0814080:CDS 45.0%
CGACATCACAACTGCAATTG+CGG + chr5_3:45864501-45864520 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG + chr5_3:45864686-45864705 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - chr5_3:45864744-45864763 Msa0814080:intron 45.0%
TCCATCTGTAACCATCATCC+AGG + chr5_3:45864748-45864767 None:intergenic 45.0%
! TGGATGATGGTTACAGATGG+AGG - chr5_3:45864747-45864766 Msa0814080:intron 45.0%
GGAGTGAGGAAATCCATCAT+TGG + chr5_3:45864903-45864922 None:intergenic 45.0%
AAACTGCAATCATGGGAGTG+AGG + chr5_3:45864917-45864936 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + chr5_3:45865452-45865471 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - chr5_3:45865465-45865484 Msa0814080:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + chr5_3:45865534-45865553 None:intergenic 45.0%
ATGGCCATTGCTCCATTGTT+TGG + chr5_3:45865574-45865593 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - chr5_3:45865575-45865594 Msa0814080:intron 45.0%
GCAGCAGCAACAACAACAAA+TGG - chr5_3:45865729-45865748 Msa0814080:intron 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + chr5_3:45865770-45865789 None:intergenic 45.0%
!! GGCTTCTCTTGGCTTTAGTT+AGG - chr5_3:45866062-45866081 Msa0814080:CDS 45.0%
TTGATCGCACATGCCAAATG+CGG + chr5_3:45866131-45866150 None:intergenic 45.0%
TTGGCATGTGCGATCAAGAT+TGG - chr5_3:45866134-45866153 Msa0814080:exon 45.0%
CATGTGCGATCAAGATTGGA+CGG - chr5_3:45866138-45866157 Msa0814080:exon 45.0%
CCGATCAAGATCAAGACAGA+CGG + chr5_3:45866230-45866249 None:intergenic 45.0%
CCGTCTGTCTTGATCTTGAT+CGG - chr5_3:45866227-45866246 Msa0814080:five_prime_UTR 45.0%
GACAAAGGCAAAGAAGGAGG+GGG + chr5_3:45862417-45862436 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + chr5_3:45862420-45862439 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + chr5_3:45862423-45862442 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + chr5_3:45862492-45862511 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG + chr5_3:45863102-45863121 None:intergenic 50.0%
!! AAGGTTTGAGTGGGTTGCTG+TGG + chr5_3:45863898-45863917 None:intergenic 50.0%
ATCGTCGGATCTTCGGCTTA+AGG + chr5_3:45863917-45863936 None:intergenic 50.0%
TTAAGCCGAAGATCCGACGA+TGG - chr5_3:45863916-45863935 Msa0814080:intron 50.0%
TCTCACCAAAGGAGTCGATC+TGG - chr5_3:45864288-45864307 Msa0814080:CDS 50.0%
GCTTCCTCACTGGACAGTTA+GGG + chr5_3:45865417-45865436 None:intergenic 50.0%
TGCTTCCTCACTGGACAGTT+AGG + chr5_3:45865418-45865437 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + chr5_3:45865593-45865612 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - chr5_3:45865593-45865612 Msa0814080:intron 50.0%
! TGTCCTTGAGGTGCTTGTTG+TGG + chr5_3:45865619-45865638 None:intergenic 50.0%
CTGCAGGGCCAAGGAAATTA+TGG - chr5_3:45865661-45865680 Msa0814080:intron 50.0%
GAAACAGGGGGAGGTGACAA+AGG + chr5_3:45862432-45862451 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + chr5_3:45862441-45862460 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + chr5_3:45862477-45862496 None:intergenic 55.0%
AGGTCAGCAGGGCTTAAACC+AGG + chr5_3:45862480-45862499 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG + chr5_3:45863199-45863218 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + chr5_3:45863213-45863232 None:intergenic 55.0%
CACCAAAGGAGTCGATCTGG+TGG - chr5_3:45864291-45864310 Msa0814080:CDS 55.0%
! CACCACCAGATCGACTCCTT+TGG + chr5_3:45864296-45864315 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG - chr5_3:45865410-45865429 Msa0814080:intron 55.0%
CGTTCGACATGCTTCCTCAC+TGG + chr5_3:45865427-45865446 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + chr5_3:45865601-45865620 None:intergenic 55.0%
AGGCCACAACAAGCACCTCA+AGG - chr5_3:45865613-45865632 Msa0814080:intron 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + chr5_3:45865654-45865673 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - chr5_3:45865652-45865671 Msa0814080:intron 55.0%
! CAGCAGCAGGCCCTTGTTGT+TGG + chr5_3:45863200-45863219 None:intergenic 60.0%
!! GAGTGGGTTGCTGTGGTTGC+TGG + chr5_3:45863891-45863910 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG - chr5_3:45864297-45864316 Msa0814080:CDS 60.0%
TTCCACTTCCACGAGCAGCG+GGG + chr5_3:45865510-45865529 None:intergenic 60.0%
CTTCCACTTCCACGAGCAGC+GGG + chr5_3:45865511-45865530 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + chr5_3:45865512-45865531 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + chr5_3:45865501-45865520 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - chr5_3:45865499-45865518 Msa0814080:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - chr5_3:45865505-45865524 Msa0814080:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 45862102 45866267 45862102 ID=Msa0814080;Name=Msa0814080
chr5_3 mRNA 45862102 45866267 45862102 ID=Msa0814080-mRNA-1;Parent=Msa0814080;Name=Msa0814080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=123|1|1|1|1|1|5|442|578
chr5_3 exon 45862102 45862976 45862102 ID=Msa0814080-mRNA-1:exon:13931;Parent=Msa0814080-mRNA-1
chr5_3 exon 45863559 45863723 45863559 ID=Msa0814080-mRNA-1:exon:13930;Parent=Msa0814080-mRNA-1
chr5_3 exon 45864011 45864654 45864011 ID=Msa0814080-mRNA-1:exon:13929;Parent=Msa0814080-mRNA-1
chr5_3 exon 45865097 45865282 45865097 ID=Msa0814080-mRNA-1:exon:13928;Parent=Msa0814080-mRNA-1
chr5_3 exon 45865836 45866267 45865836 ID=Msa0814080-mRNA-1:exon:13927;Parent=Msa0814080-mRNA-1
chr5_3 five_prime_UTR 45866145 45866267 45866145 ID=Msa0814080-mRNA-1:five_prime_utr;Parent=Msa0814080-mRNA-1
chr5_3 CDS 45865836 45866144 45865836 ID=Msa0814080-mRNA-1:cds;Parent=Msa0814080-mRNA-1
chr5_3 CDS 45865097 45865282 45865097 ID=Msa0814080-mRNA-1:cds;Parent=Msa0814080-mRNA-1
chr5_3 CDS 45864011 45864654 45864011 ID=Msa0814080-mRNA-1:cds;Parent=Msa0814080-mRNA-1
chr5_3 CDS 45863559 45863723 45863559 ID=Msa0814080-mRNA-1:cds;Parent=Msa0814080-mRNA-1
chr5_3 CDS 45862544 45862976 45862544 ID=Msa0814080-mRNA-1:cds;Parent=Msa0814080-mRNA-1
chr5_3 three_prime_UTR 45862102 45862543 45862102 ID=Msa0814080-mRNA-1:three_prime_utr;Parent=Msa0814080-mRNA-1
Gene Sequence

>Msa0814080

ATGGCATCTTCATCAACAACTAGTTTTGAAAATAATAATAATCAAAACTCTTTGAACTCATTCAACAATTTCACTTTCTCAACTCACCCTTTCATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCTGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAACAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCATCTGAAAAGAATATGATACAAACTACTGAGAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACATCACTAACAATGGATTTCAATCAGACTACTCCAATTACCAGCAACCACAGCAACCCACTCAAACCTTAAGCCGAAGATCCGACGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGGAGTTACTACAAATGCACATACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATCCTAAGCCTCAATGTACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTGATCCGATTAACGAAATCCATGATCAATCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATAGGTGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGGAAACATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAACAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCACGGTTTGATAATCAAATGGTGCCATACATGAATCAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTTTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA
Protein sequence

>Msa0814080

MASSSTTSFENNNNQNSLNSFNNFTFSTHPFMSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNLQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTTENNNSSMQSFSPEIASVQTNITNNGFQSDYSNYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHPKPQCTRRNSSSSSNALVVVPVDPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC*