AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0778120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778120 MtrunA17_Chr5g0433471 79.587 921 126 11 1 859 1 921 0.0 1431
Msa0778120 MtrunA17_Chr5g0433471 56.497 354 110 3 895 1204 437 790 4.36e-108 362
Msa0778120 MtrunA17_Chr5g0433511 60.487 944 229 20 17 852 7 914 0.0 1014
Msa0778120 MtrunA17_Chr5g0433511 60.340 353 91 3 890 1201 462 806 1.10e-119 394
Msa0778120 MtrunA17_Chr3g0109541 54.754 915 332 20 21 859 14 922 0.0 904
Msa0778120 MtrunA17_Chr3g0109541 49.198 374 132 7 882 1204 425 791 1.99e-92 318
Msa0778120 MtrunA17_Chr5g0433371 53.720 914 343 18 22 863 18 923 0.0 895
Msa0778120 MtrunA17_Chr5g0433371 52.762 362 116 8 890 1200 431 788 1.51e-91 316
Msa0778120 MtrunA17_Chr5g0433321 50.559 894 360 18 22 852 17 891 0.0 837
Msa0778120 MtrunA17_Chr5g0433321 45.378 357 129 6 889 1200 429 764 6.63e-77 273
Msa0778120 MtrunA17_Chr5g0433361 50.742 944 289 22 4 847 13 880 0.0 824
Msa0778120 MtrunA17_Chr5g0433361 53.823 327 94 5 930 1204 450 771 1.46e-90 312
Msa0778120 MtrunA17_Chr5g0433421 64.007 539 146 8 364 864 483 1011 0.0 652
Msa0778120 MtrunA17_Chr5g0433421 55.602 482 173 15 15 464 9 481 4.40e-156 493
Msa0778120 MtrunA17_Chr5g0433421 58.427 356 99 3 890 1204 528 875 8.61e-115 382
Msa0778120 MtrunA17_Chr3g0109551 41.409 937 432 23 22 844 13 946 0.0 621
Msa0778120 MtrunA17_Chr3g0109551 40.303 330 142 7 924 1199 492 820 1.22e-55 211
Msa0778120 MtrunA17_Chr5g0433351 51.321 530 147 14 13 492 2 470 1.26e-149 458
Msa0778120 MtrunA17_Chr8g0375181 34.945 910 457 25 21 836 82 950 1.52e-137 464
Msa0778120 MtrunA17_Chr8g0375181 44.186 215 99 3 1006 1199 624 838 2.30e-42 170
Msa0778120 MtrunA17_Chr3g0094211 34.399 907 465 27 21 843 17 877 1.59e-135 438
Msa0778120 MtrunA17_Chr3g0094211 45.813 203 89 3 1015 1197 550 751 3.74e-43 171
Msa0778120 MtrunA17_Chr8g0375191 35.138 905 442 29 21 836 25 873 1.84e-131 446
Msa0778120 MtrunA17_Chr8g0375191 40.714 280 142 6 942 1199 489 766 1.48e-42 171
Msa0778120 MtrunA17_Chr8g0375151 34.668 874 444 25 51 836 8 842 3.87e-125 427
Msa0778120 MtrunA17_Chr8g0375151 42.466 219 101 5 1006 1202 519 734 4.63e-38 156
Msa0778120 MtrunA17_Chr5g0433331 79.167 168 32 1 699 863 1 168 1.92e-83 269
Msa0778120 MtrunA17_Chr3g0117771 58.065 217 82 4 7 219 91 302 6.83e-74 248
Msa0778120 MtrunA17_Chr5g0433341 66.316 190 37 4 537 699 2 191 3.18e-70 233
Msa0778120 MtrunA17_Chr5g0433341 71.429 168 28 2 1022 1169 20 187 2.87e-68 227
Msa0778120 MtrunA17_Chr8g0375861 28.636 667 360 25 21 620 22 639 2.41e-55 211
Msa0778120 MtrunA17_Chr8g0375861 47.674 86 37 2 1008 1093 562 639 3.15e-13 74.7
Msa0778120 MtrunA17_Chr8g0375871 28.636 667 360 25 21 620 22 639 3.01e-55 211
Msa0778120 MtrunA17_Chr8g0375871 47.674 86 37 2 1008 1093 562 639 3.31e-13 74.7
Msa0778120 MtrunA17_Chr4g0030281 75.962 104 22 1 43 143 329 432 1.41e-39 157
Msa0778120 MtrunA17_Chr8g0343741 35.593 295 153 11 550 816 982 1267 1.05e-35 148
Msa0778120 MtrunA17_Chr8g0343741 32.105 190 105 6 1023 1190 981 1168 2.73e-15 81.6
Msa0778120 MtrunA17_Chr2g0334291 35.587 281 141 9 566 810 1791 2067 2.57e-32 137
Msa0778120 MtrunA17_Chr2g0334291 29.677 310 164 12 928 1196 1674 1970 1.46e-17 89.4
Msa0778120 MtrunA17_Chr5g0422511 34.307 274 151 8 566 815 483 751 2.76e-32 135
Msa0778120 MtrunA17_Chr5g0422511 28.125 224 130 6 1004 1204 451 666 1.85e-13 75.1
Msa0778120 MtrunA17_Chr1g0173701 32.353 272 155 8 571 817 107 374 2.34e-31 128
Msa0778120 MtrunA17_Chr5g0435821 53.333 105 41 2 734 835 11 110 1.20e-25 113
Msa0778120 MtrunA17_Chr5g0400101 29.630 270 161 6 566 811 641 905 1.94e-23 108
Msa0778120 MtrunA17_Chr7g0257921 33.449 287 154 9 559 817 364 641 6.69e-21 99.0
Msa0778120 MtrunA17_Chr2g0304151 28.440 327 181 13 518 803 493 807 1.60e-18 91.7
Msa0778120 MtrunA17_Chr5g0394941 28.754 313 170 13 532 803 507 807 2.02e-18 91.7
Msa0778120 MtrunA17_Chr1g0165651 28.782 271 151 7 565 800 656 919 5.13e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778120 AT1G65810.2 41.544 881 374 19 22 826 22 837 0.0 607
Msa0778120 AT1G65810.2 35.027 374 182 9 881 1199 368 735 1.06e-52 202
Msa0778120 AT1G65810.3 41.544 881 374 19 22 826 22 837 0.0 607
Msa0778120 AT1G65810.3 35.027 374 182 9 881 1199 368 735 1.02e-52 202
Msa0778120 AT1G65810.1 41.544 881 374 19 22 826 22 837 0.0 607
Msa0778120 AT1G65810.1 35.027 374 182 9 881 1199 368 735 1.09e-52 202
Msa0778120 AT5G37150.1 40.503 874 406 21 15 831 2 818 0.0 564
Msa0778120 AT5G37150.1 40.000 325 149 5 923 1204 394 715 1.16e-56 212
Msa0778120 AT1G65780.1 41.020 902 422 25 22 852 11 873 1.75e-180 560
Msa0778120 AT1G65780.1 34.872 390 184 12 876 1203 370 751 1.62e-39 160
Msa0778120 AT5G52090.1 41.808 708 295 18 188 831 1 655 9.23e-154 477
Msa0778120 AT5G52090.1 40.615 325 147 5 923 1204 231 552 3.08e-58 214
Msa0778120 AT5G37140.1 42.120 698 317 16 183 831 12 671 3.99e-151 470
Msa0778120 AT5G37140.1 38.602 329 158 6 923 1211 252 576 5.44e-53 199
Msa0778120 AT4G05540.1 42.003 719 322 24 135 798 11 689 6.03e-146 457
Msa0778120 AT4G05540.1 38.817 389 184 9 866 1204 235 619 2.73e-61 224
Msa0778120 AT5G37165.1 46.572 423 183 11 461 847 1 416 1.36e-100 326
Msa0778120 AT5G37165.1 41.946 298 132 6 948 1204 4 301 8.63e-58 206
Msa0778120 AT5G37030.1 55.709 289 105 3 563 828 348 636 5.77e-95 318
Msa0778120 AT5G37030.1 36.267 375 185 10 15 371 2 340 4.67e-54 201
Msa0778120 AT5G37030.1 50.794 189 73 2 1036 1204 348 536 2.36e-48 184
Msa0778120 AT5G37160.1 33.100 429 217 14 15 386 11 426 3.01e-52 191
Msa0778120 AT2G19120.1 35.034 294 156 10 550 816 762 1047 1.50e-35 147
Msa0778120 AT2G19120.1 31.633 196 110 6 1023 1196 761 954 7.09e-16 84.0
Msa0778120 AT4G15570.2 33.086 269 152 7 566 810 398 662 2.22e-33 139
Msa0778120 AT4G15570.2 28.879 232 137 6 1004 1212 366 592 5.26e-16 84.0
Msa0778120 AT4G15570.4 33.086 269 152 7 566 810 398 662 2.22e-33 139
Msa0778120 AT4G15570.4 28.879 232 137 6 1004 1212 366 592 5.26e-16 84.0
Msa0778120 AT4G15570.3 33.086 269 152 7 566 810 487 751 3.01e-33 139
Msa0778120 AT4G15570.3 28.879 232 137 6 1004 1212 455 681 4.49e-16 84.3
Msa0778120 AT4G15570.1 33.086 269 152 7 566 810 487 751 3.01e-33 139
Msa0778120 AT4G15570.1 28.879 232 137 6 1004 1212 455 681 4.49e-16 84.3
Msa0778120 AT4G30100.2 34.708 291 153 10 550 812 925 1206 4.85e-33 139
Msa0778120 AT4G30100.2 33.161 193 99 7 1023 1190 924 1111 6.00e-16 84.3
Msa0778120 AT4G30100.1 34.708 291 153 10 550 812 925 1206 4.85e-33 139
Msa0778120 AT4G30100.1 33.161 193 99 7 1023 1190 924 1111 6.00e-16 84.3
Msa0778120 AT1G16800.2 34.783 276 146 10 566 810 1719 1991 2.91e-30 131
Msa0778120 AT1G16800.2 32.778 180 97 5 1039 1196 1719 1896 5.00e-14 78.2
Msa0778120 AT1G16800.1 34.657 277 147 10 566 811 1607 1880 3.03e-30 131
Msa0778120 AT1G16800.1 32.778 180 97 5 1039 1196 1607 1784 5.43e-14 77.8
Msa0778120 AT1G16800.3 34.783 276 146 10 566 810 1649 1921 3.13e-30 131
Msa0778120 AT1G16800.3 32.778 180 97 5 1039 1196 1649 1826 5.64e-14 77.8
Msa0778120 AT5G47010.1 28.814 295 178 7 541 811 631 917 9.76e-24 109
Msa0778120 AT1G05460.2 29.904 311 171 11 542 813 517 819 7.14e-21 99.8
Msa0778120 AT1G05460.1 29.904 311 171 11 542 813 517 819 1.52e-20 99.0
Msa0778120 AT5G35970.1 29.304 273 151 8 565 802 664 929 2.10e-16 85.5
Msa0778120 AT2G03270.1 31.835 267 145 9 565 803 365 622 6.32e-16 83.6

Find 182 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTGAAACAAATGATTT+TGG 0.174315 5_2:-57983885 None:intergenic
ATGCTAATGTCAAACTTATA+TGG 0.200884 5_2:+57979505 Msa0778120:CDS
CTTCAACATTGCATTCTTAT+AGG 0.208240 5_2:+57980560 Msa0778120:CDS
AGCTGCAAAGTTTGCATGTT+TGG 0.229288 5_2:+57979375 Msa0778120:CDS
TAGCCAATAGTGATTCTATT+TGG 0.229657 5_2:+57981530 Msa0778120:CDS
CTTGGCAATTGCATTCTTAT+AGG 0.234444 5_2:+57984284 Msa0778120:CDS
GACCTATATTCAAACTTATC+AGG 0.260095 5_2:+57978596 Msa0778120:CDS
CAAATTCCTCAAGGGACTTA+TGG 0.262055 5_2:-57979893 None:intergenic
CTTGAATTGCTCAGGTCTAT+TGG 0.288768 5_2:+57980209 Msa0778120:intron
CAGTGCTTTGCTCCATTAAC+TGG 0.292054 5_2:+57979798 Msa0778120:CDS
GTTTGTAAAGAAGCGATTTC+GGG 0.294305 5_2:+57980088 Msa0778120:CDS
ATTGCTGACAAGTGTGAATT+TGG 0.297312 5_2:+57984445 Msa0778120:CDS
GTCTGCTTCCAACCAGTTAA+TGG 0.298206 5_2:-57979810 None:intergenic
AGATATTGTCTTTGGATATT+AGG 0.300734 5_2:+57981493 Msa0778120:intron
TTTGCATGGGAATAAGCTTA+TGG 0.302188 5_2:-57984545 None:intergenic
TTATGTACAGCTTCTAGTTC+TGG 0.306226 5_2:+57984158 Msa0778120:intron
TCATAAACTTGAGCATTATA+TGG 0.306286 5_2:-57984935 None:intergenic
TTTACAAGGAAACAAGCTTA+TGG 0.308835 5_2:-57980820 None:intergenic
AAGCAAACATTTCTCCTTCC+AGG 0.310186 5_2:-57980908 None:intergenic
GCTGAAGGAAAAGAGAAATT+TGG 0.315551 5_2:+57984676 Msa0778120:CDS
ATTGCTGATAATTGTGGATT+TGG 0.318750 5_2:+57980720 Msa0778120:CDS
TATAATAAGTGTTTCCTTGA+AGG 0.324113 5_2:+57984619 Msa0778120:CDS
TTCAGGAAGAAGAATTGAAT+TGG 0.330208 5_2:-57980357 None:intergenic
AACAATTCCATTGCAGCTTC+CGG 0.331031 5_2:+57984259 Msa0778120:CDS
TGCTGACGAGGATAAGAAAT+TGG 0.336808 5_2:+57981597 Msa0778120:CDS
GAGCATGATACATATGGTTT+AGG 0.346672 5_2:+57979678 Msa0778120:CDS
ACAATTCCATTGCAGCTTCC+GGG 0.348707 5_2:+57984260 Msa0778120:CDS
ACTTTCGTGACTTCACAAAA+AGG 0.349899 5_2:-57978632 None:intergenic
CCATTGCAGCTTCCGGGTCT+TGG 0.351988 5_2:+57984266 Msa0778120:CDS
TGCTAATGTCAAACTTATAT+GGG 0.352761 5_2:+57979506 Msa0778120:CDS
TTAGGTGACATTGTGCTCTT+TGG 0.353780 5_2:+57979696 Msa0778120:CDS
GTTAGTGTTCGTTCTATTGA+CGG 0.354810 5_2:+57981273 Msa0778120:CDS
GGTTGAAGTTGCTGTCATTT+CGG 0.355816 5_2:+57980998 Msa0778120:CDS
AGTTTGTAAAGAAGCGATTT+CGG 0.357100 5_2:+57980087 Msa0778120:CDS
GCAAGTGAAATGAAAGATTT+CGG 0.359478 5_2:-57980161 None:intergenic
TCTTGAACCTGGCTTGATAC+AGG 0.365832 5_2:-57980238 None:intergenic
CGCTATTCCATTGCAGCTAC+CGG 0.368033 5_2:+57980535 Msa0778120:CDS
GTAGAGAGTATGATTGAATC+TGG 0.369167 5_2:-57983973 None:intergenic
AAGAGGTGATCAATTCTTAA+AGG 0.369427 5_2:+57977846 Msa0778120:five_prime_UTR
TTTCGGCAAGTGTGTGTAGA+AGG 0.373990 5_2:-57980144 None:intergenic
TAGCTTGCATCCTTCACAAC+AGG 0.380289 5_2:-57980873 None:intergenic
AAGAGTACAATAGATCATAA+TGG 0.380329 5_2:+57978713 Msa0778120:intron
AAGCATACATTTGTCCTTCA+AGG 0.382639 5_2:-57984633 None:intergenic
CCATCTATTTCAGAGTTAGA+TGG 0.383664 5_2:-57980308 None:intergenic
TTTGAGCTTGAACTACTTGA+AGG 0.384853 5_2:+57981643 Msa0778120:CDS
AAAGCAAACCTAGTATTCTA+AGG 0.390373 5_2:-57980334 None:intergenic
CAATATGTGTCGGATTGCTT+TGG 0.394306 5_2:+57984008 Msa0778120:CDS
GATGGTTTCCTTAGAATACT+AGG 0.397818 5_2:+57980326 Msa0778120:CDS
ATATCTACTGTGAGATCAAA+TGG 0.397953 5_2:+57981327 Msa0778120:CDS
CTCTAGCAGTGGAGGCATAA+AGG 0.400028 5_2:-57978561 None:intergenic
GAATGCAGCTCTTGGATTGT+TGG 0.400521 5_2:+57977916 Msa0778120:CDS
TATTTGTTGTCAAATTCATC+AGG 0.402821 5_2:-57978949 None:intergenic
AGAGTACAATAGATCATAAT+GGG 0.403479 5_2:+57978714 Msa0778120:intron
TGTACTGCTTAACTTTCTCT+TGG 0.410225 5_2:-57981224 None:intergenic
TCACTTGAGCATGATACATA+TGG 0.411468 5_2:+57979672 Msa0778120:CDS
TCTCCAAATAGAATCACTAT+TGG 0.412562 5_2:-57981533 None:intergenic
AAGGTTGCATAGTTTAGTTA+TGG 0.412898 5_2:+57979647 Msa0778120:CDS
CACTTGCAAAACTGCAGTAT+TGG 0.413346 5_2:-57979619 None:intergenic
ATTCTTCTTCCTGAACTCAA+TGG 0.414176 5_2:+57980365 Msa0778120:CDS
GATTTCACAAACATATCAAT+TGG 0.417587 5_2:+57983749 Msa0778120:CDS
TTCTTCTTCCTGAACTCAAT+GGG 0.419082 5_2:+57980366 Msa0778120:CDS
CCATCTAACTCTGAAATAGA+TGG 0.419828 5_2:+57980308 Msa0778120:CDS
GCAATGAGATCTCCTGCTTC+CGG 0.422606 5_2:-57978746 None:intergenic
TGACCTCTCCCATTGAGTTC+AGG 0.427701 5_2:-57980374 None:intergenic
ATATGGGGACCACCAGGGAC+TGG 0.438660 5_2:+57979522 Msa0778120:CDS
TTGCTTTATAGTTGAGAAAG+AGG 0.445694 5_2:+57977829 Msa0778120:five_prime_UTR
TGTTGGATATTGTATTCAAA+TGG 0.448784 5_2:+57977933 Msa0778120:CDS
TTGGACCGTTAAGCGACAAA+AGG 0.449696 5_2:+57984027 Msa0778120:CDS
TGATTCACAAGCTTCATACT+TGG 0.452472 5_2:-57981888 None:intergenic
GTAGACAGTTATCCAGGTCT+TGG 0.454268 5_2:+57979738 Msa0778120:CDS
CTTCATGGAACTCTTTGCAT+GGG 0.462196 5_2:-57984558 None:intergenic
TTTCAAACTGTGCCCTCGAC+CGG 0.469176 5_2:-57980970 None:intergenic
TTCAAGTCATCTACTCTCTT+AGG 0.472388 5_2:-57978785 None:intergenic
TGATCAATTCTTAAAGGATG+TGG 0.475774 5_2:+57977852 Msa0778120:exon
GATGAGGAGAATGCAGCTCT+TGG 0.475939 5_2:+57977908 Msa0778120:CDS
TGCTCAAGTTTATGAAATCA+AGG 0.478188 5_2:+57984943 Msa0778120:CDS
ATGAAAGTAGACAGTTATCC+AGG 0.482340 5_2:+57979732 Msa0778120:CDS
TGAGAGACAGCTTCCTGCAT+TGG 0.485251 5_2:+57984310 Msa0778120:CDS
AGGCGATGAGAAACAACTTC+CGG 0.485744 5_2:+57980580 Msa0778120:CDS
TGCGCGGTGTTCGTTCGCTA+AGG 0.487540 5_2:+57981913 Msa0778120:CDS
CTTGAACCTGGCTTGATACA+GGG 0.491439 5_2:-57980237 None:intergenic
GGGAAATATGAACCGGAAGC+AGG 0.492091 5_2:+57978734 Msa0778120:CDS
TCTTCATGGAACTCTTTGCA+TGG 0.497272 5_2:-57984559 None:intergenic
GGAGTCGGAGGGCGAACACC+TGG 0.497748 5_2:+57978997 Msa0778120:CDS
TCATAATGGGAAATATGAAC+CGG 0.501072 5_2:+57978727 Msa0778120:CDS
ATCATTAAGAAACTGGATCA+TGG 0.501513 5_2:-57979841 None:intergenic
AATAACATAAGCAACATTGT+AGG 0.501806 5_2:-57978822 None:intergenic
GTTGGAGAATTAAAAGTCTC+GGG 0.502680 5_2:-57978524 None:intergenic
AAAGTAATAGTAGTCATGCT+AGG 0.505195 5_2:+57977876 Msa0778120:CDS
TATTAACATAGCTAAGGGTA+AGG 0.507820 5_2:+57980941 Msa0778120:CDS
TGGACCGTTAAGCGACAAAA+GGG 0.509666 5_2:+57984028 Msa0778120:CDS
CAGTTTGAAGAACATGGTTG+AGG 0.509897 5_2:+57984708 Msa0778120:CDS
ATAACATAAGCAACATTGTA+GGG 0.512640 5_2:-57978821 None:intergenic
AAATTGATGGTTCTTCCTCT+AGG 0.514715 5_2:+57981710 Msa0778120:CDS
CCAAGACCCGGAAGCTGCAA+TGG 0.515889 5_2:-57984266 None:intergenic
TTCTGATGCGGCTATTGTCA+TGG 0.516169 5_2:+57984588 Msa0778120:CDS
TGTTGGAGAATTAAAAGTCT+CGG 0.516648 5_2:-57978525 None:intergenic
AAACTTATATGGGGACCACC+AGG 0.518565 5_2:+57979516 Msa0778120:CDS
CAAGGAAACAAGCTTATGGA+TGG 0.521087 5_2:-57980816 None:intergenic
TATGGGGACCACCAGGGACT+GGG 0.521092 5_2:+57979523 Msa0778120:CDS
CGGACACAGTTTGAAGAACA+TGG 0.521487 5_2:+57984702 Msa0778120:CDS
AATTGAAAGTTTCATGACAC+TGG 0.522790 5_2:+57980061 Msa0778120:CDS
CTCCTGATAAGTTTGAATAT+AGG 0.522947 5_2:-57978598 None:intergenic
AACTGGTTGGAAGCAGACCT+TGG 0.525160 5_2:+57979815 Msa0778120:CDS
AGCTTCATACTTGGTCCCCT+AGG 0.527572 5_2:-57981879 None:intergenic
TCCTGCATTGGTTAAAAGCA+AGG 0.531433 5_2:+57984322 Msa0778120:CDS
ACAAAGAAGAAAGTTAGCAT+TGG 0.535667 5_2:+57984902 Msa0778120:CDS
CTCATCCGACTGATATTCCT+CGG 0.535849 5_2:-57980030 None:intergenic
TTTCATTAACAAATTCCTCA+AGG 0.536867 5_2:-57979902 None:intergenic
AGGATTATGTGCAGAAGTTG+TGG 0.537283 5_2:+57979997 Msa0778120:intron
TTCATTAACAAATTCCTCAA+GGG 0.538823 5_2:-57979901 None:intergenic
ATTGAATCTGGCTTTACTCA+AGG 0.542511 5_2:-57983961 None:intergenic
TCATCATAGAACTCTTTACA+AGG 0.544109 5_2:-57980834 None:intergenic
GCTTTGCTCCATTAACTGGT+TGG 0.550628 5_2:+57979802 Msa0778120:CDS
GGTAAGGAGAAATCCGGTCG+AGG 0.552677 5_2:+57980957 Msa0778120:CDS
GTGGCAGGTCAAGGAAACCT+AGG 0.553441 5_2:+57981862 Msa0778120:intron
TGAAGACCCGGTAGCTGCAA+TGG 0.553800 5_2:-57980542 None:intergenic
AAACTGGATCATGGATTCCA+AGG 0.555264 5_2:-57979832 None:intergenic
GCTAAGGGTAAGGAGAAATC+CGG 0.555875 5_2:+57980951 Msa0778120:CDS
GATCAATTCTTAAAGGATGT+GGG 0.556006 5_2:+57977853 Msa0778120:exon
CATGGGAATAAGCTTATGGA+TGG 0.557115 5_2:-57984541 None:intergenic
AGCATTGAACTCGGAGTCGG+AGG 0.557991 5_2:+57978985 Msa0778120:intron
GAATATCCCTGTATCAAGCC+AGG 0.558913 5_2:+57980231 Msa0778120:CDS
GGATTATGTGCAGAAGTTGT+GGG 0.559994 5_2:+57979998 Msa0778120:intron
TGGCAGGTCAAGGAAACCTA+GGG 0.563850 5_2:+57981863 Msa0778120:intron
ACACAGAAGAAAGTTAGCAT+TGG 0.565197 5_2:+57981165 Msa0778120:CDS
TATCTACTGTGAGATCAAAT+GGG 0.567468 5_2:+57981328 Msa0778120:CDS
TTCTGATGCCCCTGTTGTGA+AGG 0.567812 5_2:+57980863 Msa0778120:CDS
GCTATTCCATTGCAGCTACC+GGG 0.568261 5_2:+57980536 Msa0778120:CDS
CTTTATGCCTCCACTGCTAG+AGG 0.568348 5_2:+57978562 Msa0778120:CDS
GCGCGGTGTTCGTTCGCTAA+GGG 0.570938 5_2:+57981914 Msa0778120:CDS
GACATTGTGCTCTTTGGCAA+TGG 0.573866 5_2:+57979702 Msa0778120:CDS
GAAAGCATTGAACTCGGAGT+CGG 0.573956 5_2:+57978982 Msa0778120:intron
TGCAAAACTGCAGTATTGGT+CGG 0.579954 5_2:-57979615 None:intergenic
ATTTGTTGTCAAATTCATCA+GGG 0.580829 5_2:-57978948 None:intergenic
CTTTGAAGAACAATATGTGT+CGG 0.582406 5_2:+57983998 Msa0778120:CDS
CTTCCTGAACTCAATGGGAG+AGG 0.583359 5_2:+57980371 Msa0778120:CDS
AAGTAATAGTAGTCATGCTA+GGG 0.590442 5_2:+57977877 Msa0778120:CDS
AGCTTGCATCCTTCACAACA+GGG 0.593918 5_2:-57980872 None:intergenic
TCTATTAAACTGTACACAGA+AGG 0.598629 5_2:+57980452 Msa0778120:CDS
TCTGGAAAACTGTATACAGA+AGG 0.599131 5_2:+57984176 Msa0778120:CDS
ATGTTGCAATGACAAGAGCT+AGG 0.599958 5_2:+57981391 Msa0778120:CDS
AGAATGCAATTGCCAAGACC+CGG 0.600765 5_2:-57984278 None:intergenic
TGATGATACTATGACACTTG+AGG 0.602005 5_2:+57979977 Msa0778120:CDS
TCCTCAAGTCAAACTCGGTG+AGG 0.603946 5_2:-57978895 None:intergenic
TTAGATGGTTCAAAGCAAGC+AGG 0.606292 5_2:-57980293 None:intergenic
GAGATTTGGAAATTTAAGAG+AGG 0.607417 5_2:+57983824 Msa0778120:CDS
GAATGATATTTGATAGAACA+AGG 0.609124 5_2:-57978690 None:intergenic
GGAAAAGAGAAATTTGGCCG+CGG 0.611515 5_2:+57984682 Msa0778120:CDS
TATTTGGAAAGCATTGAACT+CGG 0.611582 5_2:+57978976 Msa0778120:intron
AAGTGTGTTTCCTCTAGCAG+TGG 0.615133 5_2:-57978572 None:intergenic
ATTTGATAGAACAAGGACGT+TGG 0.615742 5_2:-57978683 None:intergenic
ACTGTGAGATCAAATGGGAG+TGG 0.616435 5_2:+57981333 Msa0778120:CDS
AGAATGCAATGTTGAAGACC+CGG 0.616595 5_2:-57980554 None:intergenic
GTAAGGAGAAATCCGGTCGA+GGG 0.617529 5_2:+57980958 Msa0778120:CDS
TGTGTTTCCTCTAGCAGTGG+AGG 0.619692 5_2:-57978569 None:intergenic
GAATGCATGCGTGATGACAA+TGG 0.620117 5_2:+57983785 Msa0778120:CDS
TGAAGAAAAGCTTTCTGATG+CGG 0.621713 5_2:+57984576 Msa0778120:CDS
CGGTAGCTGCAATGGAATAG+CGG 0.631790 5_2:-57980534 None:intergenic
ATATTCAAACTTATCAGGAG+TGG 0.637541 5_2:+57978601 Msa0778120:CDS
ATGGAGCAAAGCACTGCATG+AGG 0.640690 5_2:-57979791 None:intergenic
TCAAATGGGAGTGGTAATGT+CGG 0.644297 5_2:+57981342 Msa0778120:CDS
GCTAATGTCAAACTTATATG+GGG 0.644828 5_2:+57979507 Msa0778120:CDS
ATTGGTCGGAGCACATGTCA+AGG 0.644967 5_2:-57979601 None:intergenic
TGCTAGGGATGATGATGATG+AGG 0.646644 5_2:+57977892 Msa0778120:CDS
GCCTCACCGAGTTTGACTTG+AGG 0.647748 5_2:+57978894 Msa0778120:CDS
TGTTCTTCAAACTGTGTCCG+CGG 0.651103 5_2:-57984699 None:intergenic
TCCGGCATTAGTCAAAAGCA+AGG 0.651579 5_2:+57980598 Msa0778120:CDS
GCATTGAACTCGGAGTCGGA+GGG 0.651625 5_2:+57978986 Msa0778120:intron
CATTGCCGAGGAATATCAGT+CGG 0.653775 5_2:+57980025 Msa0778120:CDS
AACTTATATGGGGACCACCA+GGG 0.658833 5_2:+57979517 Msa0778120:CDS
TACAGAAGGAATCACTCCAG+TGG 0.661330 5_2:+57984190 Msa0778120:CDS
TCAAAATCTCTATATAAACA+AGG 0.668202 5_2:+57977976 Msa0778120:CDS
TTGTTATCATAATGCTGACG+AGG 0.672154 5_2:+57981585 Msa0778120:CDS
GGACCGTTAAGCGACAAAAG+GGG 0.674349 5_2:+57984029 Msa0778120:CDS
GATGGGCCATAAGTCCCTTG+AGG 0.674590 5_2:+57979887 Msa0778120:CDS
GATTATGTGCAGAAGTTGTG+GGG 0.683227 5_2:+57979999 Msa0778120:intron
GTGATTCTTACATTGAGACA+AGG 0.684508 5_2:-57979043 None:intergenic
GCTTGCATCCTTCACAACAG+GGG 0.701811 5_2:-57980871 None:intergenic
GGCAGGTCAAGGAAACCTAG+GGG 0.759664 5_2:+57981864 Msa0778120:intron
GTTGTGGGGAGACATTGCCG+AGG 0.762702 5_2:+57980013 Msa0778120:CDS
AAGCTTGTGAATCAATTGCG+CGG 0.767382 5_2:+57981897 Msa0778120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGAAAAATATTCTTTTTT+GGG - chr5_2:57979867-57979886 None:intergenic 10.0%
!!! CTTAGAAAAATATTCTTTTT+TGG - chr5_2:57979868-57979887 None:intergenic 15.0%
!!! AAAAGAATATTTTTCTAAGA+TGG + chr5_2:57979869-57979888 Msa0778120:CDS 15.0%
!!! AAAGAATATTTTTCTAAGAT+GGG + chr5_2:57979870-57979889 Msa0778120:CDS 15.0%
!!! TATTTTGTAAATTTTTTGGA+GGG - chr5_2:57982343-57982362 None:intergenic 15.0%
!!! TTATTTTGTAAATTTTTTGG+AGG - chr5_2:57982344-57982363 None:intergenic 15.0%
!!! GCTTTATTTTGTAAATTTTT+TGG - chr5_2:57982347-57982366 None:intergenic 15.0%
!! CAAAATAAAGCTTAATAATT+AGG + chr5_2:57982356-57982375 Msa0778120:intron 15.0%
!!! TTTTATTTATGTTAATTACC+TGG - chr5_2:57982383-57982402 None:intergenic 15.0%
!! AAACTTTGTCTAAAAAAAAT+TGG - chr5_2:57982419-57982438 None:intergenic 15.0%
!!! AAATTAATTTTGTTGAAATG+TGG - chr5_2:57982690-57982709 None:intergenic 15.0%
!! TGCATTGTAAAATAAATAAA+TGG - chr5_2:57982823-57982842 None:intergenic 15.0%
!!! TTTTTTCAACTATATCATTA+GGG - chr5_2:57982864-57982883 None:intergenic 15.0%
!!! ATTTTTTCAACTATATCATT+AGG - chr5_2:57982865-57982884 None:intergenic 15.0%
!! TTAACATTGAATATACATAA+AGG + chr5_2:57983411-57983430 Msa0778120:intron 15.0%
!! TCAAAATCTCTATATAAACA+AGG + chr5_2:57977976-57977995 Msa0778120:CDS 20.0%
!!! AAAAACATTGGTTTTGATTT+TGG - chr5_2:57978151-57978170 None:intergenic 20.0%
!!! AGTTCGATTTTTAAAAACAT+TGG - chr5_2:57978163-57978182 None:intergenic 20.0%
!! AATGTTTACTATTTAACTCT+TGG + chr5_2:57978394-57978413 Msa0778120:intron 20.0%
!!! TTTAAGTTAGACCATTTTTA+CGG + chr5_2:57978465-57978484 Msa0778120:intron 20.0%
!!! GCATAGCTTTATATTTAAAA+AGG - chr5_2:57979100-57979119 None:intergenic 20.0%
!!! TTGATCATTACCTTTTATTT+AGG + chr5_2:57980629-57980648 Msa0778120:intron 20.0%
!! ACAAATTAAGCCTAAATAAA+AGG - chr5_2:57980642-57980661 None:intergenic 20.0%
!!! TTCTTTTATTAACATAGCTA+AGG + chr5_2:57980935-57980954 Msa0778120:CDS 20.0%
!!! TCTTTTATTAACATAGCTAA+GGG + chr5_2:57980936-57980955 Msa0778120:CDS 20.0%
!! ATGATTAAAAACCTAAGAAA+AGG + chr5_2:57981023-57981042 Msa0778120:CDS 20.0%
!!! GTAACATTTACTTTTGTTTT+TGG + chr5_2:57981128-57981147 Msa0778120:intron 20.0%
!! TTTGAATTTGAAGACATATA+TGG - chr5_2:57981746-57981765 None:intergenic 20.0%
!!! TTTGTGACATTTTTTTTTTG+TGG + chr5_2:57981843-57981862 Msa0778120:intron 20.0%
!! CACTTAATTTACCAAAATAT+TGG - chr5_2:57982531-57982550 None:intergenic 20.0%
!!! CAATATTTTGGTAAATTAAG+TGG + chr5_2:57982529-57982548 Msa0778120:intron 20.0%
!! TAAGTGGTAAAATTGAAATT+TGG + chr5_2:57982545-57982564 Msa0778120:intron 20.0%
!!! TATGCATCTTTTTTTTTTTG+TGG - chr5_2:57983267-57983286 None:intergenic 20.0%
!!! CGTGATTTTTGTTATAAAAA+GGG + chr5_2:57983497-57983516 Msa0778120:intron 20.0%
!!! GTGATTTTTGTTATAAAAAG+GGG + chr5_2:57983498-57983517 Msa0778120:intron 20.0%
!! CAATTCAAACAACAATAATA+AGG - chr5_2:57984365-57984384 None:intergenic 20.0%
!!! TATTATTGTTGTTTGAATTG+TGG + chr5_2:57984365-57984384 Msa0778120:intron 20.0%
! TGTTGGATATTGTATTCAAA+TGG + chr5_2:57977933-57977952 Msa0778120:CDS 25.0%
!! TGTACATTAATTTTCAGTGT+GGG - chr5_2:57978028-57978047 None:intergenic 25.0%
!! CTTGTTACTTGAAAATGATT+TGG + chr5_2:57978048-57978067 Msa0778120:intron 25.0%
!!! ACTTGAAAATGATTTGGTTT+TGG + chr5_2:57978054-57978073 Msa0778120:intron 25.0%
!! CAACTCTAAAAATCTATTAC+TGG - chr5_2:57978086-57978105 None:intergenic 25.0%
!! CTTATGACTTTTATACTTGT+TGG + chr5_2:57978120-57978139 Msa0778120:intron 25.0%
!!! CTATTCGGTTTTTAAAACAT+CGG + chr5_2:57978295-57978314 Msa0778120:intron 25.0%
!!! TGGTACATATCATTTGTTAT+TGG + chr5_2:57978414-57978433 Msa0778120:intron 25.0%
!!! TACATATCATTTGTTATTGG+TGG + chr5_2:57978417-57978436 Msa0778120:intron 25.0%
!!! TTAAGTTAGACCATTTTTAC+GGG + chr5_2:57978466-57978485 Msa0778120:intron 25.0%
!! ATTTTCATAACCCGTAAAAA+TGG - chr5_2:57978479-57978498 None:intergenic 25.0%
! GAATGATATTTGATAGAACA+AGG - chr5_2:57978693-57978712 None:intergenic 25.0%
!! AAGAGTACAATAGATCATAA+TGG + chr5_2:57978713-57978732 Msa0778120:intron 25.0%
! AGAGTACAATAGATCATAAT+GGG + chr5_2:57978714-57978733 Msa0778120:intron 25.0%
! ATAACATAAGCAACATTGTA+GGG - chr5_2:57978824-57978843 None:intergenic 25.0%
! AATAACATAAGCAACATTGT+AGG - chr5_2:57978825-57978844 None:intergenic 25.0%
!!! ATTTGTTGTCAAATTCATCA+GGG - chr5_2:57978951-57978970 None:intergenic 25.0%
!!! TATTTGTTGTCAAATTCATC+AGG - chr5_2:57978952-57978971 None:intergenic 25.0%
! TGACAACAAATATTCGTATT+TGG + chr5_2:57978960-57978979 Msa0778120:intron 25.0%
! TGAAAAGTAAGCATTTACAT+AGG - chr5_2:57979177-57979196 None:intergenic 25.0%
! GACATTTAACATTCAATACT+TGG + chr5_2:57979231-57979250 Msa0778120:intron 25.0%
! CTATACTTCTACATTATTGA+AGG - chr5_2:57979270-57979289 None:intergenic 25.0%
! ATGCTAATGTCAAACTTATA+TGG + chr5_2:57979505-57979524 Msa0778120:CDS 25.0%
! TGCTAATGTCAAACTTATAT+GGG + chr5_2:57979506-57979525 Msa0778120:CDS 25.0%
! TTCATTAACAAATTCCTCAA+GGG - chr5_2:57979904-57979923 None:intergenic 25.0%
! TTTCATTAACAAATTCCTCA+AGG - chr5_2:57979905-57979924 None:intergenic 25.0%
!! TTTTAGATTGCTGATAATTG+TGG + chr5_2:57980714-57980733 Msa0778120:intron 25.0%
!! AAGAAAAACAACCTTTTCTT+AGG - chr5_2:57981037-57981056 None:intergenic 25.0%
! AGATATTGTCTTTGGATATT+AGG + chr5_2:57981493-57981512 Msa0778120:intron 25.0%
!! TGTGAAAAATCTGAAATTGA+TGG + chr5_2:57981697-57981716 Msa0778120:CDS 25.0%
!!! TATGGTTTTTTATTACCTAG+AGG - chr5_2:57981728-57981747 None:intergenic 25.0%
!!! TATAGTCTTATTTCCATCTA+AGG + chr5_2:57981801-57981820 Msa0778120:intron 25.0%
!!! ATAGTCTTATTTCCATCTAA+GGG + chr5_2:57981802-57981821 Msa0778120:intron 25.0%
! GTTTGTGTCTCAATTTAAAA+AGG - chr5_2:57982189-57982208 None:intergenic 25.0%
! ACTATATCATTAGGGAAAAA+TGG - chr5_2:57982856-57982875 None:intergenic 25.0%
!! ACATCTCTGAAAATATCAAT+AGG + chr5_2:57982900-57982919 Msa0778120:intron 25.0%
! AAAGTTGAGAGTTATGTATA+CGG - chr5_2:57983026-57983045 None:intergenic 25.0%
! GCATCTAATAAACTATAGAA+GGG - chr5_2:57983170-57983189 None:intergenic 25.0%
! TGCATCTAATAAACTATAGA+AGG - chr5_2:57983171-57983190 None:intergenic 25.0%
!! AAAATCACGCTTGTTAAAAA+AGG - chr5_2:57983486-57983505 None:intergenic 25.0%
!!! GCGTGATTTTTGTTATAAAA+AGG + chr5_2:57983496-57983515 Msa0778120:intron 25.0%
!!! ATTTGAGAGTTTTGTGAAAA+AGG + chr5_2:57983716-57983735 Msa0778120:CDS 25.0%
! GATTTCACAAACATATCAAT+TGG + chr5_2:57983749-57983768 Msa0778120:CDS 25.0%
!! TCAAGTGAAACAAATGATTT+TGG - chr5_2:57983888-57983907 None:intergenic 25.0%
! TCAATTACTAAAAATTCCAC+TGG - chr5_2:57984209-57984228 None:intergenic 25.0%
! ATGCATTAACTATAGATTGT+TGG + chr5_2:57984393-57984412 Msa0778120:intron 25.0%
! TATAATAAGTGTTTCCTTGA+AGG + chr5_2:57984619-57984638 Msa0778120:CDS 25.0%
!! TCTTTTATTAACATAGCTGA+AGG + chr5_2:57984661-57984680 Msa0778120:CDS 25.0%
! TCATAAACTTGAGCATTATA+TGG - chr5_2:57984938-57984957 None:intergenic 25.0%
TTGCTTTATAGTTGAGAAAG+AGG + chr5_2:57977829-57977848 Msa0778120:five_prime_UTR 30.0%
AAGAGGTGATCAATTCTTAA+AGG + chr5_2:57977846-57977865 Msa0778120:five_prime_UTR 30.0%
TGATCAATTCTTAAAGGATG+TGG + chr5_2:57977852-57977871 Msa0778120:exon 30.0%
GATCAATTCTTAAAGGATGT+GGG + chr5_2:57977853-57977872 Msa0778120:exon 30.0%
AAAGTAATAGTAGTCATGCT+AGG + chr5_2:57977876-57977895 Msa0778120:CDS 30.0%
AAGTAATAGTAGTCATGCTA+GGG + chr5_2:57977877-57977896 Msa0778120:CDS 30.0%
! GTGTACATTAATTTTCAGTG+TGG - chr5_2:57978029-57978048 None:intergenic 30.0%
CTAAAAATCTATTACTGGCA+GGG - chr5_2:57978081-57978100 None:intergenic 30.0%
TCTAAAAATCTATTACTGGC+AGG - chr5_2:57978082-57978101 None:intergenic 30.0%
!!! CGATGTTTTAAAAACCGAAT+AGG - chr5_2:57978297-57978316 None:intergenic 30.0%
TGTTGGAGAATTAAAAGTCT+CGG - chr5_2:57978528-57978547 None:intergenic 30.0%
! AAGGAGTTTTTGTAATCTGT+TGG - chr5_2:57978545-57978564 None:intergenic 30.0%
GACCTATATTCAAACTTATC+AGG + chr5_2:57978596-57978615 Msa0778120:CDS 30.0%
CTCCTGATAAGTTTGAATAT+AGG - chr5_2:57978601-57978620 None:intergenic 30.0%
ATATTCAAACTTATCAGGAG+TGG + chr5_2:57978601-57978620 Msa0778120:CDS 30.0%
! TCATAATGGGAAATATGAAC+CGG + chr5_2:57978727-57978746 Msa0778120:CDS 30.0%
! TCACCAGAAAAATCATCTTT+TGG - chr5_2:57978851-57978870 None:intergenic 30.0%
!! TATTTGGAAAGCATTGAACT+CGG + chr5_2:57978976-57978995 Msa0778120:intron 30.0%
!!! ACACTTTTTTAATGATGTCC+AGG - chr5_2:57979018-57979037 None:intergenic 30.0%
!! AAATGCTTACTTTTCATCCA+TGG + chr5_2:57979181-57979200 Msa0778120:intron 30.0%
!! AATGCTTACTTTTCATCCAT+GGG + chr5_2:57979182-57979201 Msa0778120:intron 30.0%
TAAAACAATGCAATTTCCCA+TGG - chr5_2:57979201-57979220 None:intergenic 30.0%
GCTAATGTCAAACTTATATG+GGG + chr5_2:57979507-57979526 Msa0778120:CDS 30.0%
AAGGTTGCATAGTTTAGTTA+TGG + chr5_2:57979647-57979666 Msa0778120:CDS 30.0%
ATCATTAAGAAACTGGATCA+TGG - chr5_2:57979844-57979863 None:intergenic 30.0%
!!! TTTTGGGATCATTAAGAAAC+TGG - chr5_2:57979851-57979870 None:intergenic 30.0%
AATTGAAAGTTTCATGACAC+TGG + chr5_2:57980061-57980080 Msa0778120:CDS 30.0%
AGTTTGTAAAGAAGCGATTT+CGG + chr5_2:57980087-57980106 Msa0778120:CDS 30.0%
GCAAGTGAAATGAAAGATTT+CGG - chr5_2:57980164-57980183 None:intergenic 30.0%
AAAGCAAACCTAGTATTCTA+AGG - chr5_2:57980337-57980356 None:intergenic 30.0%
TTCAGGAAGAAGAATTGAAT+TGG - chr5_2:57980360-57980379 None:intergenic 30.0%
TCTATTAAACTGTACACAGA+AGG + chr5_2:57980452-57980471 Msa0778120:CDS 30.0%
CTTCAACATTGCATTCTTAT+AGG + chr5_2:57980560-57980579 Msa0778120:CDS 30.0%
ATTGCTGATAATTGTGGATT+TGG + chr5_2:57980720-57980739 Msa0778120:CDS 30.0%
! AAGAAGTATGTTTGAGAGAT+TGG + chr5_2:57980743-57980762 Msa0778120:intron 30.0%
! TTTGAGAGATTGGTAATCTT+AGG + chr5_2:57980753-57980772 Msa0778120:intron 30.0%
TTTACAAGGAAACAAGCTTA+TGG - chr5_2:57980823-57980842 None:intergenic 30.0%
TCATCATAGAACTCTTTACA+AGG - chr5_2:57980837-57980856 None:intergenic 30.0%
TATTAACATAGCTAAGGGTA+AGG + chr5_2:57980941-57980960 Msa0778120:CDS 30.0%
TCAAAAACTTGCGCATTATA+CGG - chr5_2:57981201-57981220 None:intergenic 30.0%
ATATCTACTGTGAGATCAAA+TGG + chr5_2:57981327-57981346 Msa0778120:CDS 30.0%
TATCTACTGTGAGATCAAAT+GGG + chr5_2:57981328-57981347 Msa0778120:CDS 30.0%
! TTTTGTGCAGATATTGTCTT+TGG + chr5_2:57981485-57981504 Msa0778120:intron 30.0%
TAGCCAATAGTGATTCTATT+TGG + chr5_2:57981530-57981549 Msa0778120:CDS 30.0%
TCTCCAAATAGAATCACTAT+TGG - chr5_2:57981536-57981555 None:intergenic 30.0%
!!! TGACATTTTTTTTTTGTGGC+AGG + chr5_2:57981847-57981866 Msa0778120:intron 30.0%
ATCACAAAAACAACAAAAGG+AGG - chr5_2:57982069-57982088 None:intergenic 30.0%
TCACCTTGTCATAGTAAATA+GGG - chr5_2:57982103-57982122 None:intergenic 30.0%
!!! ATTTTCAAGTGACACAACAA+TGG - chr5_2:57982217-57982236 None:intergenic 30.0%
GACTCTGAACAAATTCTAAA+AGG + chr5_2:57982266-57982285 Msa0778120:intron 30.0%
!! TGAGTTGATAGTTAAGAAGA+TGG - chr5_2:57982301-57982320 None:intergenic 30.0%
!!! TTGTAAATTTTTTGGAGGGT+TGG - chr5_2:57982339-57982358 None:intergenic 30.0%
AAAGCTTAATAATTAGGTCC+AGG + chr5_2:57982362-57982381 Msa0778120:intron 30.0%
TAACTACATGAGAATTGGAA+AGG - chr5_2:57982487-57982506 None:intergenic 30.0%
TTCCAATTCTCATGTAGTTA+AGG + chr5_2:57982487-57982506 Msa0778120:intron 30.0%
TACCTTAACTACATGAGAAT+TGG - chr5_2:57982492-57982511 None:intergenic 30.0%
TCATGTAGTTAAGGTAATTG+TGG + chr5_2:57982496-57982515 Msa0778120:intron 30.0%
! GGTGATCATTTCCAATATTT+TGG + chr5_2:57982517-57982536 Msa0778120:intron 30.0%
TAGGGAAAAATGGAAATCTT+TGG - chr5_2:57982846-57982865 None:intergenic 30.0%
TGCAAAGTTGAAATTATCGA+GGG - chr5_2:57982949-57982968 None:intergenic 30.0%
ATGCAAAGTTGAAATTATCG+AGG - chr5_2:57982950-57982969 None:intergenic 30.0%
! TTCTTTTTGTTCTTTTCCCT+CGG + chr5_2:57983092-57983111 Msa0778120:intron 30.0%
TTGATATGGACAATGCATAA+AGG + chr5_2:57983219-57983238 Msa0778120:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGTC+GGG - chr5_2:57983259-57983278 None:intergenic 30.0%
!!! CTTTTTTTTTTTGTGGTGGT+CGG - chr5_2:57983260-57983279 None:intergenic 30.0%
!!! GCATCTTTTTTTTTTTGTGG+TGG - chr5_2:57983264-57983283 None:intergenic 30.0%
!! TTTTGTTTAGTCGTGATTAG+TGG - chr5_2:57983636-57983655 None:intergenic 30.0%
!!! CGATTTTTTAAGCAGAGATT+TGG + chr5_2:57983810-57983829 Msa0778120:CDS 30.0%
GAGATTTGGAAATTTAAGAG+AGG + chr5_2:57983824-57983843 Msa0778120:CDS 30.0%
! TTTTGGTAAGTGAGTGTATA+AGG - chr5_2:57983871-57983890 None:intergenic 30.0%
! CTTTGAAGAACAATATGTGT+CGG + chr5_2:57983998-57984017 Msa0778120:CDS 30.0%
!! TCACTTTTCTGATAAATACC+AGG - chr5_2:57984101-57984120 None:intergenic 30.0%
ATCATTCGAAGTCTGAAAAA+AGG + chr5_2:57984748-57984767 Msa0778120:CDS 30.0%
AGTTACACATGATATGAATG+CGG - chr5_2:57984856-57984875 None:intergenic 30.0%
!! CATGTGTAACTTCATTTTTG+CGG + chr5_2:57984865-57984884 Msa0778120:intron 30.0%
ACAAAGAAGAAAGTTAGCAT+TGG + chr5_2:57984902-57984921 Msa0778120:CDS 30.0%
TGCTCAAGTTTATGAAATCA+AGG + chr5_2:57984943-57984962 Msa0778120:CDS 30.0%
! TAAACAAGGTTCTTTTCCCT+TGG + chr5_2:57977990-57978009 Msa0778120:intron 35.0%
TATGAAAATTGTTCTCTCGC+AGG + chr5_2:57978490-57978509 Msa0778120:intron 35.0%
GTTGGAGAATTAAAAGTCTC+GGG - chr5_2:57978527-57978546 None:intergenic 35.0%
ACTTTCGTGACTTCACAAAA+AGG - chr5_2:57978635-57978654 None:intergenic 35.0%
ATTTGATAGAACAAGGACGT+TGG - chr5_2:57978686-57978705 None:intergenic 35.0%
TTCAAGTCATCTACTCTCTT+AGG - chr5_2:57978788-57978807 None:intergenic 35.0%
! GTTTTTCCTCAAGTCAAACT+CGG - chr5_2:57978903-57978922 None:intergenic 35.0%
! AGGGAAACTGCATACATTTT+TGG - chr5_2:57978932-57978951 None:intergenic 35.0%
GTGATTCTTACATTGAGACA+AGG - chr5_2:57979046-57979065 None:intergenic 35.0%
! TTGAGCTTGTTTACTAGCAT+AGG - chr5_2:57979144-57979163 None:intergenic 35.0%
TCACTTGAGCATGATACATA+TGG + chr5_2:57979672-57979691 Msa0778120:CDS 35.0%
GAGCATGATACATATGGTTT+AGG + chr5_2:57979678-57979697 Msa0778120:CDS 35.0%
ATGAAAGTAGACAGTTATCC+AGG + chr5_2:57979732-57979751 Msa0778120:CDS 35.0%
AGAAAAATATCTCCAAGACC+TGG - chr5_2:57979753-57979772 None:intergenic 35.0%
TGATGATACTATGACACTTG+AGG + chr5_2:57979977-57979996 Msa0778120:CDS 35.0%
GTTTGTAAAGAAGCGATTTC+GGG + chr5_2:57980088-57980107 Msa0778120:CDS 35.0%
! ATCAAGAGTTTTCTTGAACC+TGG - chr5_2:57980252-57980271 None:intergenic 35.0%
CCATCTATTTCAGAGTTAGA+TGG - chr5_2:57980311-57980330 None:intergenic 35.0%
!! CCATCTAACTCTGAAATAGA+TGG + chr5_2:57980308-57980327 Msa0778120:CDS 35.0%
GATGGTTTCCTTAGAATACT+AGG + chr5_2:57980326-57980345 Msa0778120:CDS 35.0%
ATTCTTCTTCCTGAACTCAA+TGG + chr5_2:57980365-57980384 Msa0778120:CDS 35.0%
TTCTTCTTCCTGAACTCAAT+GGG + chr5_2:57980366-57980385 Msa0778120:CDS 35.0%
!!! TGTTTTTGGCAGAGTTTTTG+AGG + chr5_2:57981142-57981161 Msa0778120:intron 35.0%
ACACAGAAGAAAGTTAGCAT+TGG + chr5_2:57981165-57981184 Msa0778120:CDS 35.0%
TGTACTGCTTAACTTTCTCT+TGG - chr5_2:57981227-57981246 None:intergenic 35.0%
GTTAGTGTTCGTTCTATTGA+CGG + chr5_2:57981273-57981292 Msa0778120:CDS 35.0%
!! TTGATTTGCAGATTCCAAGT+TGG + chr5_2:57981444-57981463 Msa0778120:intron 35.0%
AACTCAGTTTACAACCAACT+TGG - chr5_2:57981461-57981480 None:intergenic 35.0%
TTGTTATCATAATGCTGACG+AGG + chr5_2:57981585-57981604 Msa0778120:CDS 35.0%
TTTGAGCTTGAACTACTTGA+AGG + chr5_2:57981643-57981662 Msa0778120:CDS 35.0%
! AAATTGATGGTTCTTCCTCT+AGG + chr5_2:57981710-57981729 Msa0778120:CDS 35.0%
GTTCTCATATAACCCTTAGA+TGG - chr5_2:57981817-57981836 None:intergenic 35.0%
!!! TTTTTTTTTGTGGCAGGTCA+AGG + chr5_2:57981853-57981872 Msa0778120:intron 35.0%
TGATTCACAAGCTTCATACT+TGG - chr5_2:57981891-57981910 None:intergenic 35.0%
CGGATCACAAAAACAACAAA+AGG - chr5_2:57982072-57982091 None:intergenic 35.0%
!!! TTTGTTGTTTTTGTGATCCG+TGG + chr5_2:57982072-57982091 Msa0778120:intron 35.0%
TAGTAAATAGGGCAAAACCA+CGG - chr5_2:57982092-57982111 None:intergenic 35.0%
TTGCCCTATTTACTATGACA+AGG + chr5_2:57982097-57982116 Msa0778120:intron 35.0%
CTCACCTTGTCATAGTAAAT+AGG - chr5_2:57982104-57982123 None:intergenic 35.0%
CTATTTACTATGACAAGGTG+AGG + chr5_2:57982102-57982121 Msa0778120:intron 35.0%
! AATTTGTTCAGAGTCATGAC+TGG - chr5_2:57982261-57982280 None:intergenic 35.0%
GTCTTAGAATTAGATACCGA+GGG - chr5_2:57983111-57983130 None:intergenic 35.0%
TGTCTTAGAATTAGATACCG+AGG - chr5_2:57983112-57983131 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGTCG+GGG - chr5_2:57983258-57983277 None:intergenic 35.0%
TTGTTATAAAAAGGGGACGA+AGG + chr5_2:57983505-57983524 Msa0778120:intron 35.0%
TGTTATAAAAAGGGGACGAA+GGG + chr5_2:57983506-57983525 Msa0778120:intron 35.0%
TTGTCTAGAAAAGCTCAACA+AGG - chr5_2:57983563-57983582 None:intergenic 35.0%
TAGTGGAACATTCATGAAGT+TGG - chr5_2:57983619-57983638 None:intergenic 35.0%
!! AGAGTTTTGTGAAAAAGGCT+TGG + chr5_2:57983721-57983740 Msa0778120:CDS 35.0%
!! ATTGAATCTGGCTTTACTCA+AGG - chr5_2:57983964-57983983 None:intergenic 35.0%
! GTAGAGAGTATGATTGAATC+TGG - chr5_2:57983976-57983995 None:intergenic 35.0%
!! TCTAGCTCAATTTCTTTTCC+TGG + chr5_2:57984080-57984099 Msa0778120:CDS 35.0%
!! TTATGTACAGCTTCTAGTTC+TGG + chr5_2:57984158-57984177 Msa0778120:intron 35.0%
TCTGGAAAACTGTATACAGA+AGG + chr5_2:57984176-57984195 Msa0778120:CDS 35.0%
CTTGGCAATTGCATTCTTAT+AGG + chr5_2:57984284-57984303 Msa0778120:CDS 35.0%
ATTGCTGACAAGTGTGAATT+TGG + chr5_2:57984445-57984464 Msa0778120:CDS 35.0%
TTTGCATGGGAATAAGCTTA+TGG - chr5_2:57984548-57984567 None:intergenic 35.0%
! CATCAGAAAGCTTTTCTTCA+TGG - chr5_2:57984576-57984595 None:intergenic 35.0%
TGAAGAAAAGCTTTCTGATG+CGG + chr5_2:57984576-57984595 Msa0778120:CDS 35.0%
AAGCATACATTTGTCCTTCA+AGG - chr5_2:57984636-57984655 None:intergenic 35.0%
GCTGAAGGAAAAGAGAAATT+TGG + chr5_2:57984676-57984695 Msa0778120:CDS 35.0%
GTTACACATGATATGAATGC+GGG - chr5_2:57984855-57984874 None:intergenic 35.0%
TTCAGTGTGGGAATTGCAAA+AGG - chr5_2:57978016-57978035 None:intergenic 40.0%
TGCCAGATTGATGTCCTATT+CGG + chr5_2:57978280-57978299 Msa0778120:intron 40.0%
AACCGAATAGGACATCAATC+TGG - chr5_2:57978285-57978304 None:intergenic 40.0%
! GCGCCAAAAGATGATTTTTC+TGG + chr5_2:57978845-57978864 Msa0778120:CDS 40.0%
AGCTGCAAAGTTTGCATGTT+TGG + chr5_2:57979375-57979394 Msa0778120:CDS 40.0%
!! TGCAAAACTGCAGTATTGGT+CGG - chr5_2:57979618-57979637 None:intergenic 40.0%
CACTTGCAAAACTGCAGTAT+TGG - chr5_2:57979622-57979641 None:intergenic 40.0%
! CAATACTGCAGTTTTGCAAG+TGG + chr5_2:57979620-57979639 Msa0778120:CDS 40.0%
TTAGGTGACATTGTGCTCTT+TGG + chr5_2:57979696-57979715 Msa0778120:CDS 40.0%
AAACTGGATCATGGATTCCA+AGG - chr5_2:57979835-57979854 None:intergenic 40.0%
CAAATTCCTCAAGGGACTTA+TGG - chr5_2:57979896-57979915 None:intergenic 40.0%
AGGATTATGTGCAGAAGTTG+TGG + chr5_2:57979997-57980016 Msa0778120:intron 40.0%
GGATTATGTGCAGAAGTTGT+GGG + chr5_2:57979998-57980017 Msa0778120:intron 40.0%
GATTATGTGCAGAAGTTGTG+GGG + chr5_2:57979999-57980018 Msa0778120:intron 40.0%
CTTGAATTGCTCAGGTCTAT+TGG + chr5_2:57980209-57980228 Msa0778120:intron 40.0%
TTAGATGGTTCAAAGCAAGC+AGG - chr5_2:57980296-57980315 None:intergenic 40.0%
AGAATGCAATGTTGAAGACC+CGG - chr5_2:57980557-57980576 None:intergenic 40.0%
!! ACCTTGCTTTTGACTAATGC+CGG - chr5_2:57980602-57980621 None:intergenic 40.0%
CAAGGAAACAAGCTTATGGA+TGG - chr5_2:57980819-57980838 None:intergenic 40.0%
AAGCTACAAAAAGAGCTTCC+TGG + chr5_2:57980890-57980909 Msa0778120:CDS 40.0%
TACAAAAAGAGCTTCCTGGA+AGG + chr5_2:57980894-57980913 Msa0778120:CDS 40.0%
AAGCAAACATTTCTCCTTCC+AGG - chr5_2:57980911-57980930 None:intergenic 40.0%
AGGGCACAGTTTGAAAAACA+TGG + chr5_2:57980977-57980996 Msa0778120:CDS 40.0%
! GGTTGAAGTTGCTGTCATTT+CGG + chr5_2:57980998-57981017 Msa0778120:CDS 40.0%
! CGTTCTATTGACGGTTTTCA+AGG + chr5_2:57981282-57981301 Msa0778120:intron 40.0%
!! TCTATTGACGGTTTTCAAGG+AGG + chr5_2:57981285-57981304 Msa0778120:intron 40.0%
! TCAAATGGGAGTGGTAATGT+CGG + chr5_2:57981342-57981361 Msa0778120:CDS 40.0%
ATGTTGCAATGACAAGAGCT+AGG + chr5_2:57981391-57981410 Msa0778120:CDS 40.0%
TGCTGACGAGGATAAGAAAT+TGG + chr5_2:57981597-57981616 Msa0778120:CDS 40.0%
AAGCTTGTGAATCAATTGCG+CGG + chr5_2:57981897-57981916 Msa0778120:CDS 40.0%
TCAAGTGACACAACAATGGA+GGG - chr5_2:57982213-57982232 None:intergenic 40.0%
TTCAAGTGACACAACAATGG+AGG - chr5_2:57982214-57982233 None:intergenic 40.0%
GAGTTATGTATACGGTGGAT+TGG - chr5_2:57983018-57983037 None:intergenic 40.0%
GTTGAGAGTTATGTATACGG+TGG - chr5_2:57983023-57983042 None:intergenic 40.0%
TATAGAAGGGTCTCGTATGT+AGG - chr5_2:57983157-57983176 None:intergenic 40.0%
! TGAGCTTAGCTCAGTTGATA+TGG + chr5_2:57983205-57983224 Msa0778120:intron 40.0%
ATGGACAATGCATAAAGGTC+CGG + chr5_2:57983224-57983243 Msa0778120:intron 40.0%
CAATATGTGTCGGATTGCTT+TGG + chr5_2:57984008-57984027 Msa0778120:CDS 40.0%
AACAATTCCATTGCAGCTTC+CGG + chr5_2:57984259-57984278 Msa0778120:CDS 40.0%
!! TCCTGCATTGGTTAAAAGCA+AGG + chr5_2:57984322-57984341 Msa0778120:CDS 40.0%
!! ACCTTGCTTTTAACCAATGC+AGG - chr5_2:57984326-57984345 None:intergenic 40.0%
TTGGACGAAGTATGTTTGAG+AGG + chr5_2:57984464-57984483 Msa0778120:intron 40.0%
! TGGTAGTGTTGGGATACAAA+AGG + chr5_2:57984488-57984507 Msa0778120:intron 40.0%
CATGGGAATAAGCTTATGGA+TGG - chr5_2:57984544-57984563 None:intergenic 40.0%
CTTCATGGAACTCTTTGCAT+GGG - chr5_2:57984561-57984580 None:intergenic 40.0%
TCTTCATGGAACTCTTTGCA+TGG - chr5_2:57984562-57984581 None:intergenic 40.0%
CAGTTTGAAGAACATGGTTG+AGG + chr5_2:57984708-57984727 Msa0778120:CDS 40.0%
! TGCTAGGGATGATGATGATG+AGG + chr5_2:57977892-57977911 Msa0778120:CDS 45.0%
GAATGCAGCTCTTGGATTGT+TGG + chr5_2:57977916-57977935 Msa0778120:CDS 45.0%
TGGGAATTGCAAAAGGCCAA+GGG - chr5_2:57978009-57978028 None:intergenic 45.0%
CTGGCAAGAGATACGAACTA+TGG - chr5_2:57978266-57978285 None:intergenic 45.0%
AAGTGTGTTTCCTCTAGCAG+TGG - chr5_2:57978575-57978594 None:intergenic 45.0%
!! GAAAGCATTGAACTCGGAGT+CGG + chr5_2:57978982-57979001 Msa0778120:intron 45.0%
AAACTTATATGGGGACCACC+AGG + chr5_2:57979516-57979535 Msa0778120:CDS 45.0%
AACTTATATGGGGACCACCA+GGG + chr5_2:57979517-57979536 Msa0778120:CDS 45.0%
! CAGTTTTGCAAGTGGCAACA+AGG + chr5_2:57979628-57979647 Msa0778120:CDS 45.0%
GACATTGTGCTCTTTGGCAA+TGG + chr5_2:57979702-57979721 Msa0778120:CDS 45.0%
GTAGACAGTTATCCAGGTCT+TGG + chr5_2:57979738-57979757 Msa0778120:CDS 45.0%
CAGTGCTTTGCTCCATTAAC+TGG + chr5_2:57979798-57979817 Msa0778120:CDS 45.0%
GCTTTGCTCCATTAACTGGT+TGG + chr5_2:57979802-57979821 Msa0778120:CDS 45.0%
GTCTGCTTCCAACCAGTTAA+TGG - chr5_2:57979813-57979832 None:intergenic 45.0%
CATTGCCGAGGAATATCAGT+CGG + chr5_2:57980025-57980044 Msa0778120:CDS 45.0%
CTCATCCGACTGATATTCCT+CGG - chr5_2:57980033-57980052 None:intergenic 45.0%
TTTCGGCAAGTGTGTGTAGA+AGG - chr5_2:57980147-57980166 None:intergenic 45.0%
TTCGAGCTCTTGAATTGCTC+AGG + chr5_2:57980201-57980220 Msa0778120:intron 45.0%
GAATATCCCTGTATCAAGCC+AGG + chr5_2:57980231-57980250 Msa0778120:CDS 45.0%
! CTTGAACCTGGCTTGATACA+GGG - chr5_2:57980240-57980259 None:intergenic 45.0%
! TCTTGAACCTGGCTTGATAC+AGG - chr5_2:57980241-57980260 None:intergenic 45.0%
AGGCGATGAGAAACAACTTC+CGG + chr5_2:57980580-57980599 Msa0778120:CDS 45.0%
TCCGGCATTAGTCAAAAGCA+AGG + chr5_2:57980598-57980617 Msa0778120:CDS 45.0%
AGCTTGCATCCTTCACAACA+GGG - chr5_2:57980875-57980894 None:intergenic 45.0%
! TAGCTTGCATCCTTCACAAC+AGG - chr5_2:57980876-57980895 None:intergenic 45.0%
GCTAAGGGTAAGGAGAAATC+CGG + chr5_2:57980951-57980970 Msa0778120:CDS 45.0%
ACTGTGAGATCAAATGGGAG+TGG + chr5_2:57981333-57981352 Msa0778120:CDS 45.0%
AAGTGACACAACAATGGAGG+GGG - chr5_2:57982211-57982230 None:intergenic 45.0%
CAAGTGACACAACAATGGAG+GGG - chr5_2:57982212-57982231 None:intergenic 45.0%
TGGACAATGCATAAAGGTCC+GGG + chr5_2:57983225-57983244 Msa0778120:intron 45.0%
GAAAAGCTCAACAAGGCTGA+AGG - chr5_2:57983556-57983575 None:intergenic 45.0%
GAATGCATGCGTGATGACAA+TGG + chr5_2:57983785-57983804 Msa0778120:CDS 45.0%
TTGGACCGTTAAGCGACAAA+AGG + chr5_2:57984027-57984046 Msa0778120:CDS 45.0%
TGGACCGTTAAGCGACAAAA+GGG + chr5_2:57984028-57984047 Msa0778120:CDS 45.0%
!! TCACCCCTTTTGTCGCTTAA+CGG - chr5_2:57984035-57984054 None:intergenic 45.0%
TACAGAAGGAATCACTCCAG+TGG + chr5_2:57984190-57984209 Msa0778120:CDS 45.0%
ACAATTCCATTGCAGCTTCC+GGG + chr5_2:57984260-57984279 Msa0778120:CDS 45.0%
AGAATGCAATTGCCAAGACC+CGG - chr5_2:57984281-57984300 None:intergenic 45.0%
ACGAAGTATGTTTGAGAGGC+TGG + chr5_2:57984468-57984487 Msa0778120:intron 45.0%
! TTTGAGAGGCTGGTAGTGTT+GGG + chr5_2:57984478-57984497 Msa0778120:intron 45.0%
TTCTGATGCGGCTATTGTCA+TGG + chr5_2:57984588-57984607 Msa0778120:CDS 45.0%
GGAAAAGAGAAATTTGGCCG+CGG + chr5_2:57984682-57984701 Msa0778120:CDS 45.0%
TGTTCTTCAAACTGTGTCCG+CGG - chr5_2:57984702-57984721 None:intergenic 45.0%
CGGACACAGTTTGAAGAACA+TGG + chr5_2:57984702-57984721 Msa0778120:CDS 45.0%
GATGAGGAGAATGCAGCTCT+TGG + chr5_2:57977908-57977927 Msa0778120:CDS 50.0%
GTGGGAATTGCAAAAGGCCA+AGG - chr5_2:57978010-57978029 None:intergenic 50.0%
! CTCTAGCAGTGGAGGCATAA+AGG - chr5_2:57978564-57978583 None:intergenic 50.0%
CTTTATGCCTCCACTGCTAG+AGG + chr5_2:57978562-57978581 Msa0778120:CDS 50.0%
TGTGTTTCCTCTAGCAGTGG+AGG - chr5_2:57978572-57978591 None:intergenic 50.0%
GGGAAATATGAACCGGAAGC+AGG + chr5_2:57978734-57978753 Msa0778120:CDS 50.0%
GCAATGAGATCTCCTGCTTC+CGG - chr5_2:57978749-57978768 None:intergenic 50.0%
! TCCTCAAGTCAAACTCGGTG+AGG - chr5_2:57978898-57978917 None:intergenic 50.0%
!! TTTGTTTTCCCAGTCCCTGG+TGG - chr5_2:57979534-57979553 None:intergenic 50.0%
!!! GTCTTTGTTTTCCCAGTCCC+TGG - chr5_2:57979537-57979556 None:intergenic 50.0%
ATTGGTCGGAGCACATGTCA+AGG - chr5_2:57979604-57979623 None:intergenic 50.0%
!! ATGGAGCAAAGCACTGCATG+AGG - chr5_2:57979794-57979813 None:intergenic 50.0%
AACTGGTTGGAAGCAGACCT+TGG + chr5_2:57979815-57979834 Msa0778120:CDS 50.0%
CTTCCTGAACTCAATGGGAG+AGG + chr5_2:57980371-57980390 Msa0778120:CDS 50.0%
TGACCTCTCCCATTGAGTTC+AGG - chr5_2:57980377-57980396 None:intergenic 50.0%
CGGTAGCTGCAATGGAATAG+CGG - chr5_2:57980537-57980556 None:intergenic 50.0%
CGCTATTCCATTGCAGCTAC+CGG + chr5_2:57980535-57980554 Msa0778120:CDS 50.0%
GCTATTCCATTGCAGCTACC+GGG + chr5_2:57980536-57980555 Msa0778120:CDS 50.0%
TTCTGATGCCCCTGTTGTGA+AGG + chr5_2:57980863-57980882 Msa0778120:CDS 50.0%
GCTTGCATCCTTCACAACAG+GGG - chr5_2:57980874-57980893 None:intergenic 50.0%
GTAAGGAGAAATCCGGTCGA+GGG + chr5_2:57980958-57980977 Msa0778120:CDS 50.0%
TTTCAAACTGTGCCCTCGAC+CGG - chr5_2:57980973-57980992 None:intergenic 50.0%
TGGCAGGTCAAGGAAACCTA+GGG + chr5_2:57981863-57981882 Msa0778120:intron 50.0%
AGCTTCATACTTGGTCCCCT+AGG - chr5_2:57981882-57981901 None:intergenic 50.0%
TCAACTGAGCTAAGCTCACG+AGG - chr5_2:57983203-57983222 None:intergenic 50.0%
GGACAATGCATAAAGGTCCG+GGG + chr5_2:57983226-57983245 Msa0778120:intron 50.0%
GGACCGTTAAGCGACAAAAG+GGG + chr5_2:57984029-57984048 Msa0778120:CDS 50.0%
TGAGAGACAGCTTCCTGCAT+TGG + chr5_2:57984310-57984329 Msa0778120:CDS 50.0%
! GTTTGAGAGGCTGGTAGTGT+TGG + chr5_2:57984477-57984496 Msa0778120:intron 50.0%
!! GCCTCACCGAGTTTGACTTG+AGG + chr5_2:57978894-57978913 Msa0778120:CDS 55.0%
! AGCATTGAACTCGGAGTCGG+AGG + chr5_2:57978985-57979004 Msa0778120:intron 55.0%
GCATTGAACTCGGAGTCGGA+GGG + chr5_2:57978986-57979005 Msa0778120:intron 55.0%
GATGGGCCATAAGTCCCTTG+AGG + chr5_2:57979887-57979906 Msa0778120:CDS 55.0%
TGAAGACCCGGTAGCTGCAA+TGG - chr5_2:57980545-57980564 None:intergenic 55.0%
GGTAAGGAGAAATCCGGTCG+AGG + chr5_2:57980957-57980976 Msa0778120:CDS 55.0%
GTGGCAGGTCAAGGAAACCT+AGG + chr5_2:57981862-57981881 Msa0778120:intron 55.0%
GGCAGGTCAAGGAAACCTAG+GGG + chr5_2:57981864-57981883 Msa0778120:intron 55.0%
ATATGGGGACCACCAGGGAC+TGG + chr5_2:57979522-57979541 Msa0778120:CDS 60.0%
TATGGGGACCACCAGGGACT+GGG + chr5_2:57979523-57979542 Msa0778120:CDS 60.0%
GTTGTGGGGAGACATTGCCG+AGG + chr5_2:57980013-57980032 Msa0778120:CDS 60.0%
TGCGCGGTGTTCGTTCGCTA+AGG + chr5_2:57981913-57981932 Msa0778120:CDS 60.0%
GCGCGGTGTTCGTTCGCTAA+GGG + chr5_2:57981914-57981933 Msa0778120:CDS 60.0%
CCAAGACCCGGAAGCTGCAA+TGG - chr5_2:57984269-57984288 None:intergenic 60.0%
CCATTGCAGCTTCCGGGTCT+TGG + chr5_2:57984266-57984285 Msa0778120:CDS 60.0%
GGTGGTCGGGGTTTGAACCC+CGG - chr5_2:57983246-57983265 None:intergenic 65.0%
GGAGTCGGAGGGCGAACACC+TGG + chr5_2:57978997-57979016 Msa0778120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 57977762 57985027 57977762 ID=Msa0778120;Name=Msa0778120
chr5_2 mRNA 57977762 57985027 57977762 ID=Msa0778120-mRNA-1;Parent=Msa0778120;Name=Msa0778120-mRNA-1;_AED=0.16;_eAED=0.16;_QI=107|0.28|0.09|1|0.38|0.13|22|0|1214
chr5_2 exon 57977762 57977997 57977762 ID=Msa0778120-mRNA-1:exon:17136;Parent=Msa0778120-mRNA-1
chr5_2 exon 57978512 57978716 57978512 ID=Msa0778120-mRNA-1:exon:17137;Parent=Msa0778120-mRNA-1
chr5_2 exon 57978726 57978974 57978726 ID=Msa0778120-mRNA-1:exon:17138;Parent=Msa0778120-mRNA-1
chr5_2 exon 57978987 57979054 57978987 ID=Msa0778120-mRNA-1:exon:17139;Parent=Msa0778120-mRNA-1
chr5_2 exon 57979366 57979557 57979366 ID=Msa0778120-mRNA-1:exon:17140;Parent=Msa0778120-mRNA-1
chr5_2 exon 57979588 57979782 57979588 ID=Msa0778120-mRNA-1:exon:17141;Parent=Msa0778120-mRNA-1
chr5_2 exon 57979789 57980004 57979789 ID=Msa0778120-mRNA-1:exon:17142;Parent=Msa0778120-mRNA-1
chr5_2 exon 57980011 57980198 57980011 ID=Msa0778120-mRNA-1:exon:17143;Parent=Msa0778120-mRNA-1
chr5_2 exon 57980223 57980425 57980223 ID=Msa0778120-mRNA-1:exon:17144;Parent=Msa0778120-mRNA-1
chr5_2 exon 57980444 57980619 57980444 ID=Msa0778120-mRNA-1:exon:17145;Parent=Msa0778120-mRNA-1
chr5_2 exon 57980720 57980751 57980720 ID=Msa0778120-mRNA-1:exon:17146;Parent=Msa0778120-mRNA-1
chr5_2 exon 57980809 57981044 57980809 ID=Msa0778120-mRNA-1:exon:17147;Parent=Msa0778120-mRNA-1
chr5_2 exon 57981154 57981294 57981154 ID=Msa0778120-mRNA-1:exon:17148;Parent=Msa0778120-mRNA-1
chr5_2 exon 57981304 57981412 57981304 ID=Msa0778120-mRNA-1:exon:17149;Parent=Msa0778120-mRNA-1
chr5_2 exon 57981495 57981731 57981495 ID=Msa0778120-mRNA-1:exon:17150;Parent=Msa0778120-mRNA-1
chr5_2 exon 57981869 57981955 57981869 ID=Msa0778120-mRNA-1:exon:17151;Parent=Msa0778120-mRNA-1
chr5_2 exon 57983692 57983936 57983692 ID=Msa0778120-mRNA-1:exon:17152;Parent=Msa0778120-mRNA-1
chr5_2 exon 57983946 57984101 57983946 ID=Msa0778120-mRNA-1:exon:17153;Parent=Msa0778120-mRNA-1
chr5_2 exon 57984168 57984343 57984168 ID=Msa0778120-mRNA-1:exon:17154;Parent=Msa0778120-mRNA-1
chr5_2 exon 57984445 57984476 57984445 ID=Msa0778120-mRNA-1:exon:17155;Parent=Msa0778120-mRNA-1
chr5_2 exon 57984534 57984769 57984534 ID=Msa0778120-mRNA-1:exon:17156;Parent=Msa0778120-mRNA-1
chr5_2 exon 57984891 57985027 57984891 ID=Msa0778120-mRNA-1:exon:17157;Parent=Msa0778120-mRNA-1
chr5_2 five_prime_UTR 57977762 57977868 57977762 ID=Msa0778120-mRNA-1:five_prime_utr;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57977869 57977997 57977869 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57978512 57978716 57978512 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57978726 57978974 57978726 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57978987 57979054 57978987 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57979366 57979557 57979366 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57979588 57979782 57979588 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57979789 57980004 57979789 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57980011 57980198 57980011 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57980223 57980425 57980223 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57980444 57980619 57980444 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57980720 57980751 57980720 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57980809 57981044 57980809 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57981154 57981294 57981154 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57981304 57981412 57981304 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57981495 57981731 57981495 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57981869 57981955 57981869 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57983692 57983936 57983692 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57983946 57984101 57983946 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57984168 57984343 57984168 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57984445 57984476 57984445 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57984534 57984769 57984534 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
chr5_2 CDS 57984891 57985027 57984891 ID=Msa0778120-mRNA-1:cds;Parent=Msa0778120-mRNA-1
Gene Sequence

>Msa0778120

ATGTGGGAAAGTAATAGTAGTCATGCTAGGGATGATGATGATGAGGAGAATGCAGCTCTTGGATTGTTGGATATTGTATTCAAATGGTCTCTCAAAGATGTTTTGAATCAAAATCTCTATATAAACAAGGTGAAGAAAATTCCCGAGACTTTTAATTCTCCAACAGATTACAAAAACTCCTTTATGCCTCCACTGCTAGAGGAAACACACTTTGACCTATATTCAAACTTATCAGGAGTGGCTCATGCTCCTTTTTGTGAAGTCACGAAAGTTGAAAGAGACAACAAGCAATTCAAACTTCCAACGTCCTTGTTCTATCAAATATCATTCAAGAATCATAATGGGAAATATGAACCGGAAGCAGGAGATCTCATTGCTTTGACAGATATTATGCCTAAGAGAGTAGATGACTTGAATACACAGAAATGTCCCTACAATGTTGCTTATGTTATTGCGCCAAAAGATGATTTTTCTGGTGAACTCTCAATACTGTCATCGAAATGCCTCACCGAGTTTGACTTGAGGAAAAACGATGCACCAAAAATGTATGCAGTTTCCCTGATGAATTTGACAACAAATATTCCATTGAACTCGGAGTCGGAGGGCGAACACCTGGACATCATTAAAAAAGTGTTGCGACCTTGTCTCAATATTAGAGAAAGCTGCAAAGTTTGCATGTTTGGATCAAATAGTCAGTCTTCTTTCGTTAAAGATGTAATTCGTTCTCAAGATCTGAATGAATCACAACAAAAAGCAGTTTCAAGCTGTGTTAGTATGATGAATTGTTCTCATGCTAATGTCAAACTTATATGGGGACCACCAGGGACTGGGAAAACAAAGACTTTGCAAACAAGAACCTTGACATGTGCTCCGACCAATACTGCAGTTTTGCAAGTGGCAACAAGGTTGCATAGTTTAGTTATGGATTCACTTGAGCATGATACATATGGTTTAGGTGACATTGTGCTCTTTGGCAATGGTAAGAGAATGAAAGTAGACAGTTATCCAGGTCTTGGAGATATTTTTCTTGATTATCGCAACCTCATGCAGTGCTTTGCTCCATTAACTGGTTGGAAGCAGACCTTGGAATCCATGATCCAGTTTCTTAATGATCCCAAAAAAGAATATTTTTCTAAGATGGGCCATAAGTCCCTTGAGGAATTTGTTAATGAAAAAAATAGTCATGTTTTATCTGCATATCGTGCTTATAAGCGAATTAGTAAAGATGATGATACTATGACACTTGAGGATTATAAGTTGTGGGGAGACATTGCCGAGGAATATCAGTCGGATGAGATTGATAAAATTGAAAGTTTCATGACACTGGAGAAGTTTGTAAAGAAGCGATTTCGGGAACTAAGTGAGAAGCTCAAATTCTTGATGCAAACCTTCTACACACACTTGCCGAAATCTTTCATTTCACTTGCAACAGTGAAAAACATGTCTATTGGAATATCCCTGTATCAAGCCAGGTTCAAGAAAACTCTTGATGAGTGTGAAAAAGAAAGTATTCCTGCTTGCTTTGAACCATCTAACTCTGAAATAGATGGTTTCCTTAGAATACTAGGTTTGCTTTCCAATTCAATTCTTCTTCCTGAACTCAATGGGAGAGGTCACATTGACAAGTTTTGCTTGTCGAATGCACTGTCTAGTTCTATTAAACTGTACACAGAAGGAATGAGTCAAGTGAAATTTTTAGTGATTGATGAAGCTGCACAGTTGAAAGAATGCGAATCCGCTATTCCATTGCAGCTACCGGGTCTTCAACATTGCATTCTTATAGGCGATGAGAAACAACTTCCGGCATTAGTCAAAAGCAAGATTGCTGATAATTGTGGATTTGGAAGAAGTATAATGCATCCATCCATAAGCTTGTTTCCTTGTAAAGAGTTCTATGATGAGAAAATTTCTGATGCCCCTGTTGTGAAGGATGCAAGCTACAAAAAGAGCTTCCTGGAAGGAGAAATGTTTGCTTCATATTCTTTTATTAACATAGCTAAGGGTAAGGAGAAATCCGGTCGAGGGCACAGTTTGAAAAACATGGTTGAAGTTGCTGTCATTTCGGAGATGATTAAAAACCTAAGAAAAGAGTTTTTGAGGACACAGAAGAAAGTTAGCATTGGAATTATTTCACCGTATAATGCGCAAGTTTTTGAAATCCAAGAGAAAGTTAAGCAGTACACTTCAGCTTCTGATACTGACTTCTCTGTTAGTGTTCGTTCTATTGACGGAGGTGAAGAAGATATTATAATAATATCTACTGTGAGATCAAATGGGAGTGGTAATGTCGGTTTTCTTTCAAATAGACAAAGAGCTAATGTTGCAATGACAAGAGCTAGATATTGTCTTTGGATATTAGGCAATGCATCTACTTTAGCCAATAGTGATTCTATTTGGAGAAAGTTAATTCTTGATGCTAAGAGAAGAGATTGTTATCATAATGCTGACGAGGATAAGAAATTGGCTCGAGTTATTGATGATGTCTTGTTTGAGCTTGAACTACTTGAAGGCTCTGAGTCACAGTTTAAGAAACTAAGTCTATGTGAAAAATCTGAAATTGATGGTTCTTCCTCTAGGTCAAGGAAACCTAGGGGACCAAGTATGAAGCTTGTGAATCAATTGCGCGGTGTTCGTTCGCTAAGGGAAGACATTGAATCACTGCTAACGAAGTATGTTTATCACATGACATTTGAGAGTTTTGTGAAAAAGGCTTGGAAAGAGATTTCACAAACATATCAATTGGAAGAAGATGATAAGAATGCATGCGTGATGACAATGGAGCGATTTTTTAAGCAGAGATTTGGAAATTTAAGAGAGGTTCATGTGTTCTTAAATCATGCCTTATACACTCACTTACCAAAATCATTTGTTTCACTTGAAACAATGAAAGTTATGTTACAAGCTCTTAAGTCTTTTGAAGAGTCCTTGAGTAAAGCCAGATTCAATCATACTCTCTACAACTTTGAAGAACAATATGTGTCGGATTGCTTTGGACCGTTAAGCGACAAAAGGGGTGAGATTCTTCGAATTCTAAGTTTGCTATCTAGCTCAATTTCTTTTCCTGCTTCTAGTTCTGGAAAACTGTATACAGAAGGAATCACTCCAGTGGAATTTTTAGTAATTGATGAAGCTGCACAACTTAAAGAATGTGAATCAACAATTCCATTGCAGCTTCCGGGTCTTGGCAATTGCATTCTTATAGGCGATGAGAGACAGCTTCCTGCATTGGTTAAAAGCAAGATTGCTGACAAGTGTGAATTTGGACGAAGTATAATGCATCCATCCATAAGCTTATTCCCATGCAAAGAGTTCCATGAAGAAAAGCTTTCTGATGCGGCTATTGTCATGGCAGAAAGCTATAATAAGTGTTTCCTTGAAGGACAAATGTATGCTTCTTATTCTTTTATTAACATAGCTGAAGGAAAAGAGAAATTTGGCCGCGGACACAGTTTGAAGAACATGGTTGAGGTTGCTGTAATTTCTGAGATCATTCGAAGTCTGAAAAAAGAGTTTATGAGAACAAAGAAGAAAGTTAGCATTGGAATCATATCTCCATATAATGCTCAAGTTTATGAAATCAAGGAGAAAGTTAAGCAGTACACTTCGATAACTAAAATTCTTCAGCTACAGATCATAATGAGATAG
Protein sequence

>Msa0778120

MWESNSSHARDDDDEENAALGLLDIVFKWSLKDVLNQNLYINKVKKIPETFNSPTDYKNSFMPPLLEETHFDLYSNLSGVAHAPFCEVTKVERDNKQFKLPTSLFYQISFKNHNGKYEPEAGDLIALTDIMPKRVDDLNTQKCPYNVAYVIAPKDDFSGELSILSSKCLTEFDLRKNDAPKMYAVSLMNLTTNIPLNSESEGEHLDIIKKVLRPCLNIRESCKVCMFGSNSQSSFVKDVIRSQDLNESQQKAVSSCVSMMNCSHANVKLIWGPPGTGKTKTLQTRTLTCAPTNTAVLQVATRLHSLVMDSLEHDTYGLGDIVLFGNGKRMKVDSYPGLGDIFLDYRNLMQCFAPLTGWKQTLESMIQFLNDPKKEYFSKMGHKSLEEFVNEKNSHVLSAYRAYKRISKDDDTMTLEDYKLWGDIAEEYQSDEIDKIESFMTLEKFVKKRFRELSEKLKFLMQTFYTHLPKSFISLATVKNMSIGISLYQARFKKTLDECEKESIPACFEPSNSEIDGFLRILGLLSNSILLPELNGRGHIDKFCLSNALSSSIKLYTEGMSQVKFLVIDEAAQLKECESAIPLQLPGLQHCILIGDEKQLPALVKSKIADNCGFGRSIMHPSISLFPCKEFYDEKISDAPVVKDASYKKSFLEGEMFASYSFINIAKGKEKSGRGHSLKNMVEVAVISEMIKNLRKEFLRTQKKVSIGIISPYNAQVFEIQEKVKQYTSASDTDFSVSVRSIDGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLILDAKRRDCYHNADEDKKLARVIDDVLFELELLEGSESQFKKLSLCEKSEIDGSSSRSRKPRGPSMKLVNQLRGVRSLREDIESLLTKYVYHMTFESFVKKAWKEISQTYQLEEDDKNACVMTMERFFKQRFGNLREVHVFLNHALYTHLPKSFVSLETMKVMLQALKSFEESLSKARFNHTLYNFEEQYVSDCFGPLSDKRGEILRILSLLSSSISFPASSSGKLYTEGITPVEFLVIDEAAQLKECESTIPLQLPGLGNCILIGDERQLPALVKSKIADKCEFGRSIMHPSISLFPCKEFHEEKLSDAAIVMAESYNKCFLEGQMYASYSFINIAEGKEKFGRGHSLKNMVEVAVISEIIRSLKKEFMRTKKKVSIGIISPYNAQVYEIKEKVKQYTSITKILQLQIIMR*