Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736060 | XP_024639695.1 | 82.328 | 928 | 156 | 3 | 1 | 927 | 1 | 921 | 0.0 | 1569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736060 | sp|B6SFA4|MAA3_ARATH | 37.748 | 302 | 181 | 6 | 581 | 879 | 454 | 751 | 2.34e-48 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736060 | A0A396HTZ4 | 82.328 | 928 | 156 | 3 | 1 | 927 | 1 | 921 | 0.0 | 1569 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0736060 | 0.839215 | 1.810064e-57 | -8.615850e-47 |
| Msa0101810 | Msa0736060 | -0.804010 | 2.651744e-49 | -8.615850e-47 |
| Msa0616560 | Msa0736060 | -0.802151 | 6.427453e-49 | -8.615850e-47 |
| Msa0653020 | Msa0736060 | 0.816840 | 4.494589e-52 | -8.615850e-47 |
| Msa0657970 | Msa0736060 | 0.814747 | 1.316250e-51 | -8.615850e-47 |
| Msa0670030 | Msa0736060 | 0.820146 | 8.001469e-53 | -8.615850e-47 |
| Msa0718240 | Msa0736060 | 0.811756 | 5.970714e-51 | -8.615850e-47 |
| Msa0719490 | Msa0736060 | -0.811262 | 7.643687e-51 | -8.615850e-47 |
| Msa0733200 | Msa0736060 | 0.837780 | 4.247265e-57 | -8.615850e-47 |
| Msa0736060 | Msa0736110 | 0.832701 | 8.134366e-56 | -8.615850e-47 |
| Msa0736060 | Msa0773610 | 0.815292 | 9.962787e-52 | -8.615850e-47 |
| Msa0736060 | Msa0777790 | 0.820537 | 6.509997e-53 | -8.615850e-47 |
| Msa0736060 | Msa0777850 | 0.819091 | 1.392911e-52 | -8.615850e-47 |
| Msa0736060 | Msa0777930 | 0.929842 | 3.886798e-93 | -8.615850e-47 |
| Msa0736060 | Msa0778120 | 0.805452 | 1.326079e-49 | -8.615850e-47 |
| Msa0736060 | Msa0813200 | 0.804562 | 2.035644e-49 | -8.615850e-47 |
| Msa0736060 | Msa0815180 | 0.935919 | 3.964616e-97 | -8.615850e-47 |
| Msa0736060 | Msa0824310 | 0.811763 | 5.948339e-51 | -8.615850e-47 |
| Msa0736060 | Msa0839330 | 0.801472 | 8.862731e-49 | -8.615850e-47 |
| Msa0736060 | Msa0885270 | 0.812069 | 5.102357e-51 | -8.615850e-47 |
| Msa0736060 | Msa0885280 | 0.822031 | 2.943755e-53 | -8.615850e-47 |
| Msa0736060 | Msa0909120 | 0.810754 | 9.847532e-51 | -8.615850e-47 |
| Msa0736060 | Msa0947080 | 0.813432 | 2.567646e-51 | -8.615850e-47 |
| Msa0736060 | Msa0947100 | 0.804549 | 2.048534e-49 | -8.615850e-47 |
| Msa0736060 | Msa0947230 | 0.809624 | 1.726213e-50 | -8.615850e-47 |
| Msa0736060 | Msa0961420 | -0.818619 | 1.783172e-52 | -8.615850e-47 |
| Msa0736060 | Msa0992350 | 0.809416 | 1.912942e-50 | -8.615850e-47 |
| Msa0736060 | Msa0997080 | 0.800327 | 1.518094e-48 | -8.615850e-47 |
| Msa0736060 | Msa1042710 | 0.824897 | 6.291008e-54 | -8.615850e-47 |
| Msa0736060 | Msa1044090 | 0.811946 | 5.428117e-51 | -8.615850e-47 |
| Msa0736060 | Msa1079180 | 0.802514 | 5.410894e-49 | -8.615850e-47 |
| Msa0736060 | Msa1083410 | 0.804175 | 2.450484e-49 | -8.615850e-47 |
| Msa0736060 | Msa1111760 | 0.800324 | 1.520207e-48 | -8.615850e-47 |
| Msa0736060 | Msa1135590 | 0.801112 | 1.049862e-48 | -8.615850e-47 |
| Msa0736060 | Msa1154070 | 0.800035 | 1.740688e-48 | -8.615850e-47 |
| Msa0736060 | Msa1160670 | 0.800989 | 1.112642e-48 | -8.615850e-47 |
| Msa0736060 | Msa1179120 | 0.802627 | 5.129841e-49 | -8.615850e-47 |
| Msa0736060 | Msa1195920 | 0.810287 | 1.242761e-50 | -8.615850e-47 |
| Msa0736060 | Msa1228210 | 0.808833 | 2.549998e-50 | -8.615850e-47 |
| Msa0736060 | Msa1252390 | 0.828496 | 8.705420e-55 | -8.615850e-47 |
| Msa0736060 | Msa1271280 | 0.814867 | 1.238122e-51 | -8.615850e-47 |
| Msa0736060 | Msa1271290 | 0.802347 | 5.858167e-49 | -8.615850e-47 |
| Msa0736060 | Msa1271300 | 0.802510 | 5.422770e-49 | -8.615850e-47 |
| Msa0736060 | Msa1283860 | 0.810340 | 1.210044e-50 | -8.615850e-47 |
| Msa0736060 | Msa1308640 | 0.800856 | 1.184579e-48 | -8.615850e-47 |
| Msa0736060 | Msa1322890 | 0.803111 | 4.074028e-49 | -8.615850e-47 |
| Msa0736060 | Msa1324760 | 0.810763 | 9.806892e-51 | -8.615850e-47 |
| Msa0736060 | Msa1324780 | 0.809638 | 1.713793e-50 | -8.615850e-47 |
| Msa0736060 | Msa1335770 | 0.814900 | 1.217405e-51 | -8.615850e-47 |
| Msa0736060 | Msa1378760 | 0.812284 | 4.581455e-51 | -8.615850e-47 |
| Msa0736060 | Msa1438250 | 0.812340 | 4.454126e-51 | -8.615850e-47 |
| Msa0152420 | Msa0736060 | 0.837070 | 6.454804e-57 | -8.615850e-47 |
| Msa0165430 | Msa0736060 | 0.809304 | 2.021261e-50 | -8.615850e-47 |
| Msa0179280 | Msa0736060 | 0.800624 | 1.320842e-48 | -8.615850e-47 |
| Msa0201330 | Msa0736060 | 0.827860 | 1.238628e-54 | -8.615850e-47 |
| Msa0399210 | Msa0736060 | 0.809749 | 1.622072e-50 | -8.615850e-47 |
| Msa0463460 | Msa0736060 | 0.807709 | 4.428164e-50 | -8.615850e-47 |
| Msa0243910 | Msa0736060 | 0.826279 | 2.960483e-54 | -8.615850e-47 |
| Msa0243930 | Msa0736060 | 0.829258 | 5.693775e-55 | -8.615850e-47 |
| Msa0493850 | Msa0736060 | 0.801538 | 8.588273e-49 | -8.615850e-47 |
| Msa0502270 | Msa0736060 | 0.802140 | 6.462536e-49 | -8.615850e-47 |
| Msa0533070 | Msa0736060 | 0.811760 | 5.960179e-51 | -8.615850e-47 |
| Msa0557680 | Msa0736060 | 0.801674 | 8.055752e-49 | -8.615850e-47 |
| Msa0590840 | Msa0736060 | 0.805531 | 1.275981e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736060 | MtrunA17_Chr5g0433371 | 82.328 | 928 | 156 | 3 | 1 | 927 | 1 | 921 | 0.0 | 1569 |
| Msa0736060 | MtrunA17_Chr5g0433321 | 76.915 | 927 | 184 | 5 | 1 | 927 | 1 | 897 | 0.0 | 1465 |
| Msa0736060 | MtrunA17_Chr3g0109541 | 57.143 | 931 | 378 | 13 | 6 | 927 | 4 | 922 | 0.0 | 1007 |
| Msa0736060 | MtrunA17_Chr5g0433471 | 56.828 | 908 | 374 | 11 | 17 | 921 | 22 | 914 | 0.0 | 965 |
| Msa0736060 | MtrunA17_Chr5g0433511 | 51.423 | 949 | 381 | 17 | 14 | 923 | 9 | 916 | 0.0 | 856 |
| Msa0736060 | MtrunA17_Chr5g0433361 | 49.224 | 967 | 347 | 19 | 1 | 913 | 1 | 877 | 0.0 | 808 |
| Msa0736060 | MtrunA17_Chr3g0109551 | 43.450 | 939 | 484 | 13 | 17 | 913 | 13 | 946 | 0.0 | 750 |
| Msa0736060 | MtrunA17_Chr5g0433421 | 56.217 | 571 | 221 | 10 | 360 | 926 | 459 | 1004 | 0.0 | 586 |
| Msa0736060 | MtrunA17_Chr5g0433421 | 46.275 | 510 | 245 | 9 | 1 | 503 | 1 | 488 | 6.20e-123 | 397 |
| Msa0736060 | MtrunA17_Chr3g0094211 | 35.141 | 922 | 508 | 19 | 17 | 911 | 18 | 876 | 4.17e-169 | 519 |
| Msa0736060 | MtrunA17_Chr8g0375181 | 35.522 | 929 | 510 | 21 | 16 | 910 | 82 | 955 | 3.67e-158 | 515 |
| Msa0736060 | MtrunA17_Chr8g0375151 | 35.412 | 898 | 489 | 18 | 46 | 910 | 8 | 847 | 2.05e-150 | 492 |
| Msa0736060 | MtrunA17_Chr8g0375191 | 34.861 | 938 | 476 | 26 | 16 | 906 | 25 | 874 | 4.78e-148 | 486 |
| Msa0736060 | MtrunA17_Chr5g0433351 | 44.216 | 536 | 226 | 7 | 1 | 530 | 1 | 469 | 3.53e-131 | 402 |
| Msa0736060 | MtrunA17_Chr5g0433341 | 67.204 | 186 | 60 | 1 | 581 | 765 | 5 | 190 | 1.45e-82 | 264 |
| Msa0736060 | MtrunA17_Chr5g0433331 | 73.292 | 161 | 42 | 1 | 767 | 926 | 2 | 162 | 4.16e-72 | 235 |
| Msa0736060 | MtrunA17_Chr8g0375861 | 28.333 | 720 | 413 | 21 | 1 | 686 | 9 | 659 | 3.88e-65 | 239 |
| Msa0736060 | MtrunA17_Chr8g0375871 | 28.333 | 720 | 413 | 21 | 1 | 686 | 9 | 659 | 4.09e-65 | 239 |
| Msa0736060 | MtrunA17_Chr8g0343741 | 37.736 | 318 | 180 | 6 | 582 | 885 | 954 | 1267 | 4.94e-51 | 195 |
| Msa0736060 | MtrunA17_Chr5g0422511 | 38.235 | 306 | 183 | 6 | 581 | 884 | 450 | 751 | 6.25e-47 | 181 |
| Msa0736060 | MtrunA17_Chr1g0173701 | 38.519 | 270 | 161 | 5 | 619 | 886 | 108 | 374 | 1.82e-45 | 169 |
| Msa0736060 | MtrunA17_Chr2g0334291 | 41.237 | 291 | 143 | 8 | 613 | 884 | 1791 | 2072 | 1.06e-44 | 176 |
| Msa0736060 | MtrunA17_Chr3g0117771 | 45.745 | 188 | 90 | 4 | 35 | 221 | 121 | 297 | 5.79e-39 | 147 |
| Msa0736060 | MtrunA17_Chr5g0400101 | 35.932 | 295 | 169 | 7 | 594 | 881 | 625 | 906 | 7.92e-38 | 153 |
| Msa0736060 | MtrunA17_Chr7g0257921 | 36.491 | 285 | 159 | 11 | 596 | 872 | 357 | 627 | 7.58e-30 | 126 |
| Msa0736060 | MtrunA17_Chr2g0304151 | 32.174 | 345 | 197 | 13 | 556 | 881 | 490 | 816 | 1.04e-28 | 124 |
| Msa0736060 | MtrunA17_Chr5g0394941 | 32.174 | 345 | 197 | 13 | 556 | 881 | 490 | 816 | 1.21e-28 | 124 |
| Msa0736060 | MtrunA17_Chr5g0435821 | 53.271 | 107 | 45 | 1 | 800 | 906 | 11 | 112 | 9.33e-28 | 119 |
| Msa0736060 | MtrunA17_Chr4g0030281 | 51.515 | 99 | 44 | 3 | 38 | 135 | 329 | 424 | 4.02e-18 | 89.7 |
| Msa0736060 | MtrunA17_Chr1g0165031 | 32.031 | 256 | 149 | 11 | 613 | 854 | 1130 | 1374 | 3.68e-16 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736060 | AT1G65810.2 | 44.235 | 902 | 400 | 16 | 14 | 895 | 19 | 837 | 0.0 | 702 |
| Msa0736060 | AT1G65810.3 | 44.235 | 902 | 400 | 16 | 14 | 895 | 19 | 837 | 0.0 | 702 |
| Msa0736060 | AT1G65810.1 | 44.235 | 902 | 400 | 16 | 14 | 895 | 19 | 837 | 0.0 | 702 |
| Msa0736060 | AT1G65780.1 | 41.731 | 913 | 461 | 15 | 12 | 907 | 6 | 864 | 0.0 | 672 |
| Msa0736060 | AT5G37150.1 | 40.676 | 917 | 439 | 19 | 15 | 918 | 7 | 831 | 0.0 | 624 |
| Msa0736060 | AT5G37140.1 | 43.378 | 740 | 345 | 12 | 186 | 918 | 12 | 684 | 0.0 | 558 |
| Msa0736060 | AT4G05540.1 | 43.324 | 734 | 340 | 14 | 147 | 867 | 19 | 689 | 0.0 | 548 |
| Msa0736060 | AT5G52090.1 | 43.194 | 720 | 334 | 12 | 191 | 900 | 1 | 655 | 0.0 | 546 |
| Msa0736060 | AT5G37165.1 | 48.970 | 437 | 194 | 6 | 492 | 918 | 1 | 418 | 4.09e-129 | 396 |
| Msa0736060 | AT5G37030.1 | 60.627 | 287 | 110 | 2 | 610 | 894 | 348 | 633 | 2.99e-112 | 359 |
| Msa0736060 | AT5G37030.1 | 38.601 | 386 | 186 | 11 | 15 | 397 | 7 | 344 | 4.81e-61 | 220 |
| Msa0736060 | AT5G37160.1 | 33.958 | 427 | 227 | 10 | 15 | 405 | 16 | 423 | 9.28e-66 | 228 |
| Msa0736060 | AT2G19120.1 | 38.924 | 316 | 175 | 6 | 584 | 885 | 736 | 1047 | 5.73e-51 | 195 |
| Msa0736060 | AT4G15570.2 | 37.748 | 302 | 181 | 6 | 581 | 879 | 365 | 662 | 9.15e-50 | 189 |
| Msa0736060 | AT4G15570.4 | 37.748 | 302 | 181 | 6 | 581 | 879 | 365 | 662 | 9.15e-50 | 189 |
| Msa0736060 | AT4G15570.3 | 37.748 | 302 | 181 | 6 | 581 | 879 | 454 | 751 | 2.38e-49 | 188 |
| Msa0736060 | AT4G15570.1 | 37.748 | 302 | 181 | 6 | 581 | 879 | 454 | 751 | 2.38e-49 | 188 |
| Msa0736060 | AT4G30100.2 | 37.261 | 314 | 179 | 6 | 582 | 881 | 897 | 1206 | 4.60e-48 | 186 |
| Msa0736060 | AT4G30100.1 | 37.261 | 314 | 179 | 6 | 582 | 881 | 897 | 1206 | 4.60e-48 | 186 |
| Msa0736060 | AT1G16800.2 | 39.007 | 282 | 152 | 7 | 613 | 881 | 1719 | 1993 | 1.30e-42 | 170 |
| Msa0736060 | AT1G16800.3 | 39.007 | 282 | 152 | 7 | 613 | 881 | 1649 | 1923 | 1.56e-42 | 169 |
| Msa0736060 | AT1G16800.1 | 39.007 | 282 | 152 | 7 | 613 | 881 | 1607 | 1881 | 1.92e-42 | 169 |
| Msa0736060 | AT5G47010.1 | 34.768 | 302 | 179 | 7 | 587 | 881 | 628 | 918 | 2.41e-37 | 152 |
| Msa0736060 | AT2G03270.1 | 35.088 | 285 | 134 | 11 | 612 | 872 | 365 | 622 | 1.05e-27 | 120 |
| Msa0736060 | AT1G05460.2 | 31.935 | 310 | 183 | 9 | 592 | 882 | 519 | 819 | 9.40e-27 | 118 |
| Msa0736060 | AT5G35970.1 | 33.445 | 299 | 175 | 8 | 586 | 869 | 638 | 927 | 1.90e-26 | 117 |
| Msa0736060 | AT1G05460.1 | 31.935 | 310 | 183 | 9 | 592 | 882 | 519 | 819 | 3.15e-26 | 116 |
| Msa0736060 | AT2G38770.1 | 32.157 | 255 | 150 | 10 | 613 | 854 | 1120 | 1364 | 3.58e-18 | 90.9 |
| Msa0736060 | AT1G08840.3 | 29.323 | 266 | 154 | 9 | 614 | 861 | 1053 | 1302 | 2.74e-15 | 81.3 |
| Msa0736060 | AT1G08840.2 | 29.323 | 266 | 154 | 9 | 614 | 861 | 1037 | 1286 | 2.92e-15 | 81.3 |
| Msa0736060 | AT1G08840.4 | 29.323 | 266 | 154 | 9 | 614 | 861 | 1050 | 1299 | 2.98e-15 | 81.3 |
| Msa0736060 | AT1G08840.1 | 29.323 | 266 | 154 | 9 | 614 | 861 | 1018 | 1267 | 3.25e-15 | 81.3 |
Find 175 sgRNAs with CRISPR-Local
Find 511 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTACTGTTAGATCAAATT+TGG | 0.093624 | 5_1:-51883034 | Msa0736060:CDS |
| TCTCATATAGGTTATATTTA+TGG | 0.166836 | 5_1:-51886494 | Msa0736060:CDS |
| TGACCACAAATGTTCGTATT+TGG | 0.173437 | 5_1:-51886349 | Msa0736060:CDS |
| CTTGGTGACATAGTTCTATT+TGG | 0.183728 | 5_1:-51885527 | Msa0736060:CDS |
| TTTATTTGTGTAGCAGAATT+TGG | 0.189465 | 5_1:-51883222 | Msa0736060:intron |
| CCTCAATTTACAACAAAATA+TGG | 0.207106 | 5_1:-51884822 | Msa0736060:CDS |
| CTCTTTCGTTAACATATCTA+AGG | 0.215038 | 5_1:-51883690 | Msa0736060:CDS |
| ATTGCATAATGATTATTATT+AGG | 0.230496 | 5_1:-51882590 | Msa0736060:three_prime_UTR |
| GATTACTGGAAGACTTAAAA+AGG | 0.234576 | 5_1:-51883603 | Msa0736060:CDS |
| TTTGTTGACAAGAATGTCTT+TGG | 0.241004 | 5_1:+51886800 | None:intergenic |
| GATTTGCTCAGTTGGATATT+AGG | 0.250150 | 5_1:-51882186 | Msa0736060:three_prime_UTR |
| TTTACTTGGAAACATGCTTA+TGG | 0.250220 | 5_1:+51883805 | None:intergenic |
| CTTGAATGTATTCAAGGATT+TGG | 0.250292 | 5_1:-51882350 | Msa0736060:three_prime_UTR |
| GTTAATGTTCGTTCTGTTGA+TGG | 0.251906 | 5_1:-51883090 | Msa0736060:CDS |
| CGCGATTTGTGAAAACATAT+TGG | 0.253026 | 5_1:-51882384 | Msa0736060:three_prime_UTR |
| TCTTGTCCTCATCAGCATTA+TGG | 0.256425 | 5_1:+51882770 | None:intergenic |
| TTACATGAAGTCATTCTTTC+CGG | 0.264296 | 5_1:-51886774 | Msa0736060:CDS |
| ATGAAAATATTTAGAGTTCT+TGG | 0.266316 | 5_1:-51885011 | Msa0736060:CDS |
| GTGATTCTTACCCTTGAATA+AGG | 0.266472 | 5_1:+51886266 | None:intergenic |
| AAAGATTTAGACATTATATT+TGG | 0.269354 | 5_1:+51882221 | None:intergenic |
| AACATTAGCTCTTTGTCTAT+TGG | 0.291056 | 5_1:+51882990 | None:intergenic |
| ATGAAAATTGATTCTTATAA+AGG | 0.293820 | 5_1:-51885491 | Msa0736060:CDS |
| AAGCTTCTCTTTGCGAAATC+AGG | 0.300161 | 5_1:-51886697 | Msa0736060:CDS |
| TACATATCATATTGCTCTTC+GGG | 0.315147 | 5_1:+51885359 | None:intergenic |
| TGCTGATGAGGACAAGAAAT+TGG | 0.317285 | 5_1:-51882764 | Msa0736060:CDS |
| GGACCCCATATGAGTTTAAT+AGG | 0.323872 | 5_1:+51885713 | None:intergenic |
| TAAATTGAGACTGGAGCTTT+TGG | 0.327496 | 5_1:+51892534 | None:intergenic |
| CCATCATAGAACTCTTTACT+TGG | 0.330173 | 5_1:+51883791 | None:intergenic |
| ATAGCTGACAGGGCTGAATA+TGG | 0.338362 | 5_1:-51883905 | Msa0736060:CDS |
| ATGATCCTATTAAACTCATA+TGG | 0.348044 | 5_1:-51885718 | Msa0736060:CDS |
| GCCAACACTGCAGTATTTGT+TGG | 0.356576 | 5_1:+51885608 | None:intergenic |
| CGTTCTGTTGATGGCTTTCA+AGG | 0.356770 | 5_1:-51883081 | Msa0736060:CDS |
| TCACTTGACCATGGTTCATA+TGG | 0.361305 | 5_1:-51885551 | Msa0736060:CDS |
| AGATATTGTCTTTGGATTGT+AGG | 0.365423 | 5_1:-51882868 | Msa0736060:CDS |
| TCCTTCCATCTCTGAGTTCA+AGG | 0.368448 | 5_1:+51886322 | None:intergenic |
| GTGTTCTGATTCTTAACTTC+AGG | 0.370620 | 5_1:+51885642 | None:intergenic |
| ATTGATTCTTATAAAGGTCT+TGG | 0.370658 | 5_1:-51885485 | Msa0736060:CDS |
| GACAGGGTGGAAAAGTAGTT+TGG | 0.370701 | 5_1:-51885408 | Msa0736060:CDS |
| TGTACTGCTTCACTTTCTCT+TGG | 0.374331 | 5_1:+51883136 | None:intergenic |
| ATTTGATAGAACAGGTCATT+TGG | 0.375203 | 5_1:+51886644 | None:intergenic |
| ATGGAAAGCTTGTTGGCGTT+TGG | 0.377848 | 5_1:+51884953 | None:intergenic |
| ATAATTCTTGAATGTATTCA+AGG | 0.384580 | 5_1:-51882356 | Msa0736060:three_prime_UTR |
| GTTAAGTGTTGGGATGAGTA+TGG | 0.385233 | 5_1:-51885141 | Msa0736060:CDS |
| ATACATATCATATTGCTCTT+CGG | 0.388050 | 5_1:+51885358 | None:intergenic |
| GCTGCTATCTCTGAGATTAC+TGG | 0.389658 | 5_1:-51883617 | Msa0736060:CDS |
| TCAAATTTGGGTGGAAAAGT+TGG | 0.393517 | 5_1:-51883021 | Msa0736060:CDS |
| AAGCTATAACAAGCATTTCC+TGG | 0.395649 | 5_1:-51883735 | Msa0736060:CDS |
| GAGTTTGTGAAGAAGAAATA+TGG | 0.399921 | 5_1:-51885206 | Msa0736060:CDS |
| TCTTCTAAATTGTACACAAA+TGG | 0.400229 | 5_1:-51884744 | Msa0736060:CDS |
| TGAAAATATTTAGAGTTCTT+GGG | 0.401846 | 5_1:-51885010 | Msa0736060:CDS |
| TAATAGATATTGTATTCTCT+TGG | 0.402917 | 5_1:-51887580 | Msa0736060:CDS |
| TTCCTGGGAGGAAAGATGTT+TGG | 0.404531 | 5_1:-51883719 | Msa0736060:CDS |
| GCAATAAGATCACCGACTTC+AGG | 0.407697 | 5_1:+51886572 | None:intergenic |
| TTTCTTGAGTTTGTAAAGAA+AGG | 0.413026 | 5_1:-51882494 | Msa0736060:three_prime_UTR |
| ATTTGGAGGGTGGAAGTAGT+TGG | 0.414669 | 5_1:+51886661 | None:intergenic |
| TCTACTGTTAGATCAAATTT+GGG | 0.419635 | 5_1:-51883033 | Msa0736060:CDS |
| ACCATTGAGGAATGTCTTCA+TGG | 0.423064 | 5_1:-51887611 | Msa0736060:CDS |
| AAGAATGTCTTTGGAATCTT+CGG | 0.424721 | 5_1:+51886809 | None:intergenic |
| TTTGAAAGATTAGTACTGTT+GGG | 0.425936 | 5_1:-51883872 | Msa0736060:CDS |
| TATAGTCTTGTCAAAGTACT+TGG | 0.427870 | 5_1:-51886441 | Msa0736060:CDS |
| TGATCCTATTAAACTCATAT+GGG | 0.428444 | 5_1:-51885717 | Msa0736060:CDS |
| ATATGGGGTCCACCAGGAAC+TGG | 0.434231 | 5_1:-51885701 | Msa0736060:CDS |
| CCATTGTCCTGTGGCATTGG+AGG | 0.435882 | 5_1:-51885228 | Msa0736060:CDS |
| TTAATTTAGAATTCATCAAA+AGG | 0.438506 | 5_1:-51887670 | Msa0736060:five_prime_UTR |
| TCATGAACTTGTGCCTTGTA+TGG | 0.439485 | 5_1:+51883162 | None:intergenic |
| CATTTAATAAACTAAGCATA+AGG | 0.440913 | 5_1:-51882684 | Msa0736060:CDS |
| TGTATTCTCTTGGACTATAG+AGG | 0.446274 | 5_1:-51887570 | Msa0736060:CDS |
| GTACCATTGTCCTGTGGCAT+TGG | 0.446545 | 5_1:-51885231 | Msa0736060:CDS |
| AGTGAAGCAGTACATGGTTT+CGG | 0.446804 | 5_1:-51883127 | Msa0736060:CDS |
| CGAACATTAACTGAAAAGTT+AGG | 0.447013 | 5_1:+51883102 | None:intergenic |
| TATGTTTGTCACTGGAGAAT+AGG | 0.447357 | 5_1:+51885817 | None:intergenic |
| AACATGTTTCCTTTCAATTG+AGG | 0.448102 | 5_1:-51885039 | Msa0736060:CDS |
| TTAATGTCGAACCCATGCTT+TGG | 0.449121 | 5_1:+51882000 | None:intergenic |
| CTTGTCACGATTTGGTGAAA+AGG | 0.449899 | 5_1:-51882042 | Msa0736060:three_prime_UTR |
| GCTTATTTCTCTTACAATGT+TGG | 0.451615 | 5_1:+51883754 | None:intergenic |
| ATTCTTTCCGGCATTGATAG+AGG | 0.451644 | 5_1:-51886762 | Msa0736060:CDS |
| TTGGCGTTTGGTTTGACTCA+TGG | 0.453321 | 5_1:+51884965 | None:intergenic |
| CACAGAGTTACTATTAACTA+AGG | 0.454935 | 5_1:+51882834 | None:intergenic |
| AAGTGTTGCAGCCTTATTCA+AGG | 0.460824 | 5_1:-51886277 | Msa0736060:CDS |
| CTCAAACGTTGTATCTTGAT+TGG | 0.462763 | 5_1:-51884636 | Msa0736060:CDS |
| TTTGGAGGGTGGAAGTAGTT+GGG | 0.464631 | 5_1:+51886662 | None:intergenic |
| AAGTACTTTGACAAGACTAT+AGG | 0.467208 | 5_1:+51886443 | None:intergenic |
| TCACTGTAATTTGATAGAAC+AGG | 0.468402 | 5_1:+51886636 | None:intergenic |
| AAAGGTTGTTCTTGATGCTA+TGG | 0.472159 | 5_1:-51882806 | Msa0736060:CDS |
| AATCATCATGGAAAGCTTGT+TGG | 0.476080 | 5_1:+51884946 | None:intergenic |
| TCGGAGATCGTCTCCACCTT+CGG | 0.479664 | 5_1:-51892493 | Msa0736060:intron |
| CCAAGTAAAGAGTTCTATGA+TGG | 0.479910 | 5_1:-51883791 | Msa0736060:CDS |
| TTTCCAAATACGAACATTTG+TGG | 0.483247 | 5_1:+51886346 | None:intergenic |
| AACAAATACTGCAGTGTTGG+CGG | 0.486006 | 5_1:-51885606 | Msa0736060:CDS |
| ATTTGAAAGATTAGTACTGT+TGG | 0.486058 | 5_1:-51883873 | Msa0736060:CDS |
| GGTGAAAAGGTGACACGATC+TGG | 0.488778 | 5_1:-51882029 | Msa0736060:three_prime_UTR |
| GACCATGGTTCATATGGTCT+TGG | 0.490210 | 5_1:-51885545 | Msa0736060:CDS |
| GAAATTGGATCAAGCTATTG+AGG | 0.490847 | 5_1:-51882749 | Msa0736060:CDS |
| TAAAATCATTGAACCGTACA+CGG | 0.492074 | 5_1:+51882407 | None:intergenic |
| AAGATACAACGTTTGAGGCC+AGG | 0.501291 | 5_1:+51884642 | None:intergenic |
| AAAGTGTGTATGACTTGAGC+AGG | 0.502599 | 5_1:-51886529 | Msa0736060:CDS |
| TTCATCAAAAGGGCTAACTA+AGG | 0.512069 | 5_1:-51887659 | Msa0736060:five_prime_UTR |
| TCATCACCACCTCAATTGAA+AGG | 0.512446 | 5_1:+51885030 | None:intergenic |
| GACGATCTCCGAGGCAGTGA+TGG | 0.512642 | 5_1:+51892504 | None:intergenic |
| TAATTTAGAATTCATCAAAA+GGG | 0.517776 | 5_1:-51887669 | Msa0736060:five_prime_UTR |
| CAGAAACATCTACTTTCTCT+AGG | 0.519693 | 5_1:-51882654 | Msa0736060:CDS |
| TGCTTATCAGAAGAAAATCT+CGG | 0.520365 | 5_1:-51885845 | Msa0736060:CDS |
| CTTGGAAACATGCTTATGGA+TGG | 0.522324 | 5_1:+51883809 | None:intergenic |
| ATATTACTGATGAGGTGTAC+GGG | 0.525263 | 5_1:-51886610 | Msa0736060:CDS |
| ATTTAATAAACTAAGCATAA+GGG | 0.527540 | 5_1:-51882683 | Msa0736060:CDS |
| CAATCAAGATACAACGTTTG+AGG | 0.531012 | 5_1:+51884637 | None:intergenic |
| TGTGTTTCCTCTATCAATGC+CGG | 0.532520 | 5_1:+51886755 | None:intergenic |
| TAGTAACTCTGTGTGGAGAA+AGG | 0.532620 | 5_1:-51882824 | Msa0736060:CDS |
| TTCATGATAAATTTGACTTG+AGG | 0.533734 | 5_1:-51886415 | Msa0736060:CDS |
| AGCTATAACAAGCATTTCCT+GGG | 0.534203 | 5_1:-51883734 | Msa0736060:CDS |
| AATATTACTGATGAGGTGTA+CGG | 0.538320 | 5_1:-51886611 | Msa0736060:CDS |
| GATTTGACTATGTTTGTCAC+TGG | 0.539058 | 5_1:+51885809 | None:intergenic |
| ACAAGGAATAAAGTCAGCAT+AGG | 0.539198 | 5_1:-51883195 | Msa0736060:CDS |
| ATCTGGTGAAGGCCAAAGCA+TGG | 0.539737 | 5_1:-51882012 | Msa0736060:three_prime_UTR |
| AACCAAACATCTTTCCTCCC+AGG | 0.540336 | 5_1:+51883717 | None:intergenic |
| GGCTAACTAAGGAACAAAGA+TGG | 0.540804 | 5_1:-51887648 | Msa0736060:exon |
| TGATAGAACAGGTCATTTGG+AGG | 0.545988 | 5_1:+51886647 | None:intergenic |
| GCTTATCAGAAGAAAATCTC+GGG | 0.549497 | 5_1:-51885844 | Msa0736060:CDS |
| TGGCGGAGAAGCAACAAGCT+AGG | 0.549504 | 5_1:+51892554 | None:intergenic |
| GGCTTGAAGTAAATTGAGAC+TGG | 0.552243 | 5_1:+51892525 | None:intergenic |
| TCCAACAAATACTGCAGTGT+TGG | 0.554100 | 5_1:-51885609 | Msa0736060:CDS |
| GAAAGCCTTGAACTCAGAGA+TGG | 0.554892 | 5_1:-51886327 | Msa0736060:CDS |
| TACACAAGGATTTGCTCAGT+TGG | 0.555228 | 5_1:-51882194 | Msa0736060:three_prime_UTR |
| GATAGAACAGGTCATTTGGA+GGG | 0.556167 | 5_1:+51886648 | None:intergenic |
| ACTTCAAGCCATCACTGCCT+CGG | 0.557276 | 5_1:-51892512 | Msa0736060:five_prime_UTR |
| ATGTTTCCTTTCAATTGAGG+TGG | 0.558015 | 5_1:-51885036 | Msa0736060:CDS |
| GCTATTCCATTGCAACTACC+TGG | 0.560794 | 5_1:-51884660 | Msa0736060:CDS |
| TTGAGGCCAGGTAGTTGCAA+TGG | 0.561539 | 5_1:+51884654 | None:intergenic |
| CAAGGAATAAAGTCAGCATA+GGG | 0.564686 | 5_1:-51883194 | Msa0736060:CDS |
| GAGCTAATGTTGCTATCACT+AGG | 0.565746 | 5_1:-51882978 | Msa0736060:CDS |
| CGGAAAATACATACCGAAGG+TGG | 0.570275 | 5_1:+51892480 | None:intergenic |
| ATGTTGCTATCACTAGGGCT+AGG | 0.572268 | 5_1:-51882972 | Msa0736060:intron |
| TTCACAAATTGGAGTTCACA+AGG | 0.574660 | 5_1:-51882119 | Msa0736060:three_prime_UTR |
| TTGTTTCCATAATGCTGATG+AGG | 0.575645 | 5_1:-51882776 | Msa0736060:CDS |
| ACGCTTTCATCACATAGCTA+AGG | 0.576277 | 5_1:-51885576 | Msa0736060:CDS |
| AGTGTTGCAGCCTTATTCAA+GGG | 0.577634 | 5_1:-51886276 | Msa0736060:intron |
| AAATACTGCAGTGTTGGCGG+TGG | 0.578550 | 5_1:-51885603 | Msa0736060:CDS |
| AGAGAAAGTGAAGCAGTACA+TGG | 0.587610 | 5_1:-51883133 | Msa0736060:CDS |
| TCTGGTGAAGGCCAAAGCAT+GGG | 0.589058 | 5_1:-51882011 | Msa0736060:three_prime_UTR |
| ACTGATGAGGTGTACGGGGT+AGG | 0.591414 | 5_1:-51886605 | Msa0736060:CDS |
| ACAAACTCCTCCAATGCCAC+AGG | 0.591864 | 5_1:+51885221 | None:intergenic |
| ACTGTTAGATCAAATTTGGG+TGG | 0.595440 | 5_1:-51883030 | Msa0736060:CDS |
| CTAAATCTTTATGCTACACA+AGG | 0.596080 | 5_1:-51882208 | Msa0736060:three_prime_UTR |
| AAACTCATATGGGGTCCACC+AGG | 0.598783 | 5_1:-51885707 | Msa0736060:CDS |
| TCTTTCGTTAACATATCTAA+GGG | 0.599560 | 5_1:-51883689 | Msa0736060:CDS |
| TCCAGCAATGGTCAAAAGCA+AGG | 0.601328 | 5_1:-51884598 | Msa0736060:intron |
| GAAGAGATGTAATACCATTG+AGG | 0.602360 | 5_1:-51887624 | Msa0736060:CDS |
| GAGAGTTATAGTCATGTGAA+AGG | 0.603950 | 5_1:-51885284 | Msa0736060:CDS |
| TCAATTGAAAGGAAACATGT+TGG | 0.607459 | 5_1:+51885041 | None:intergenic |
| AAAATCATTGAACCGTACAC+GGG | 0.607589 | 5_1:+51882408 | None:intergenic |
| GAGGAATAACTACCCGTGTA+CGG | 0.607934 | 5_1:-51882420 | Msa0736060:three_prime_UTR |
| AAGGTGACACGATCTGGTGA+AGG | 0.609692 | 5_1:-51882023 | Msa0736060:three_prime_UTR |
| AGGGATCATATCACCATACA+AGG | 0.611535 | 5_1:-51883175 | Msa0736060:CDS |
| AGTGAAGAATATTACTGATG+AGG | 0.611651 | 5_1:-51886618 | Msa0736060:CDS |
| ACCATGAAGACATTCCTCAA+TGG | 0.613334 | 5_1:+51887610 | None:intergenic |
| TTTCATACAAGAAACGGTGT+AGG | 0.614711 | 5_1:-51885253 | Msa0736060:CDS |
| GGAAAATATGAACCTGAAGT+CGG | 0.615834 | 5_1:-51886584 | Msa0736060:CDS |
| AGTCGACAAAATATCAGATG+AGG | 0.616240 | 5_1:-51882439 | Msa0736060:three_prime_UTR |
| AGCTAATGTTGCTATCACTA+GGG | 0.619251 | 5_1:-51882977 | Msa0736060:CDS |
| TCTGTTGATGGCTTTCAAGG+TGG | 0.620094 | 5_1:-51883078 | Msa0736060:CDS |
| CCTCCAATGCCACAGGACAA+TGG | 0.620337 | 5_1:+51885228 | None:intergenic |
| GCCTTGAACTCAGAGATGGA+AGG | 0.630365 | 5_1:-51886323 | Msa0736060:CDS |
| TGAGAGACAACTTCCAGCAA+TGG | 0.631253 | 5_1:-51884610 | Msa0736060:CDS |
| AGAACAGGTCATTTGGAGGG+TGG | 0.634884 | 5_1:+51886651 | None:intergenic |
| TAGCAGAATTTGGAAAGACA+AGG | 0.642842 | 5_1:-51883212 | Msa0736060:CDS |
| TTTGTGTCAGATAGCTGACA+GGG | 0.645516 | 5_1:-51883915 | Msa0736060:intron |
| GATCCTATTAAACTCATATG+GGG | 0.648704 | 5_1:-51885716 | Msa0736060:CDS |
| GCTAAGGATTCACTTGACCA+TGG | 0.649789 | 5_1:-51885560 | Msa0736060:CDS |
| TATAACAAGCATTTCCTGGG+AGG | 0.655253 | 5_1:-51883731 | Msa0736060:CDS |
| TAGTTAATAGTAACTCTGTG+TGG | 0.673014 | 5_1:-51882831 | Msa0736060:CDS |
| CACCAAGACCATATGAACCA+TGG | 0.679684 | 5_1:+51885543 | None:intergenic |
| TATTACTGATGAGGTGTACG+GGG | 0.686178 | 5_1:-51886609 | Msa0736060:CDS |
| AGTTTAATAGGATCATTGTG+AGG | 0.690593 | 5_1:+51885725 | None:intergenic |
| GTGTAGGTACCATTGTCCTG+TGG | 0.714198 | 5_1:-51885237 | Msa0736060:CDS |
| GAAGGTGGAGACGATCTCCG+AGG | 0.751639 | 5_1:+51892495 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAATAAAGTTGTTTTA+CGG | - | chr5_1:51882217-51882236 | Msa0736060:three_prime_UTR | 10.0% |
| !! | AGATATAATTAACAAAAATA+TGG | + | chr5_1:51882691-51882710 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr5_1:51882822-51882841 | Msa0736060:CDS | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | - | chr5_1:51882883-51882902 | Msa0736060:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | - | chr5_1:51882884-51882903 | Msa0736060:intron | 10.0% |
| !! | ATATTTAAAAGTTGAATTAT+AGG | + | chr5_1:51884609-51884628 | None:intergenic | 10.0% |
| !! | GTCAATTTAATAAAAAAAAA+AGG | + | chr5_1:51885805-51885824 | None:intergenic | 10.0% |
| !! | TGAAAAAAGTTTATAAAAAA+TGG | - | chr5_1:51892024-51892043 | Msa0736060:intron | 10.0% |
| !!! | ACAACTTTATTTTTTAAGAA+CGG | + | chr5_1:51882213-51882232 | None:intergenic | 15.0% |
| !! | TAAATCAAAGTATAATTACT+TGG | + | chr5_1:51882425-51882444 | None:intergenic | 15.0% |
| !!! | AGTAATTATACTTTGATTTA+AGG | - | chr5_1:51882425-51882444 | Msa0736060:three_prime_UTR | 15.0% |
| !!! | GTAATTATACTTTGATTTAA+GGG | - | chr5_1:51882426-51882445 | Msa0736060:three_prime_UTR | 15.0% |
| !! | AATGCTATTATAATTAAGTA+AGG | + | chr5_1:51882500-51882519 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr5_1:51882572-51882591 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | + | chr5_1:51882656-51882675 | None:intergenic | 15.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | - | chr5_1:51882913-51882932 | Msa0736060:intron | 15.0% |
| !! | CATTAGTATTGTTTAAATTA+CGG | - | chr5_1:51883029-51883048 | Msa0736060:CDS | 15.0% |
| !! | ATTTATCCTTAATGTATTTA+GGG | + | chr5_1:51884204-51884223 | None:intergenic | 15.0% |
| !!! | TTTTATAATTAGAGAATAGA+TGG | + | chr5_1:51884377-51884396 | None:intergenic | 15.0% |
| !!! | ACAAAAGTATATAATTTTGA+TGG | + | chr5_1:51884451-51884470 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAGAGAAAAATAG+GGG | + | chr5_1:51884785-51884804 | None:intergenic | 15.0% |
| !!! | GTTTTTAAAAGAGAAAAATA+GGG | + | chr5_1:51884786-51884805 | None:intergenic | 15.0% |
| !!! | TGTTTTTAAAAGAGAAAAAT+AGG | + | chr5_1:51884787-51884806 | None:intergenic | 15.0% |
| !! | AAAAGATAATAGATTGTATT+TGG | + | chr5_1:51884936-51884955 | None:intergenic | 15.0% |
| !!! | TGTATCTTTTTTTTTTTTTG+TGG | - | chr5_1:51885162-51885181 | Msa0736060:CDS | 15.0% |
| !!! | ACTTTTCATTTTTTTTAACT+TGG | + | chr5_1:51885573-51885592 | None:intergenic | 15.0% |
| !! | AAAATTACTTACTTGAAAAA+TGG | + | chr5_1:51885942-51885961 | None:intergenic | 15.0% |
| !!! | TATAATTTAATCCATCATTT+TGG | + | chr5_1:51886234-51886253 | None:intergenic | 15.0% |
| !! | TATTTACAAAGTTATTGAAA+TGG | - | chr5_1:51886254-51886273 | Msa0736060:intron | 15.0% |
| !! | GTTATTTAATAAAATCTCAA+AGG | - | chr5_1:51886327-51886346 | Msa0736060:CDS | 15.0% |
| !!! | TTAATTTAGAATTCATCAAA+AGG | - | chr5_1:51886895-51886914 | Msa0736060:intron | 15.0% |
| !!! | TAATTTAGAATTCATCAAAA+GGG | - | chr5_1:51886896-51886915 | Msa0736060:intron | 15.0% |
| !! | TGAATTAATTCAAAGAAAAA+GGG | + | chr5_1:51887189-51887208 | None:intergenic | 15.0% |
| !! | TTGAATTAATTCAAAGAAAA+AGG | + | chr5_1:51887190-51887209 | None:intergenic | 15.0% |
| !! | TAGTATTCAAATTTCTTAAT+TGG | - | chr5_1:51887520-51887539 | Msa0736060:intron | 15.0% |
| !! | CTAAATCTAAATTTATCTAA+TGG | + | chr5_1:51887565-51887584 | None:intergenic | 15.0% |
| !! | AATTTGATTATAAGATCTAA+AGG | + | chr5_1:51888359-51888378 | None:intergenic | 15.0% |
| !!! | TTTTCATTATATTTTACAGA+TGG | - | chr5_1:51888680-51888699 | Msa0736060:intron | 15.0% |
| !!! | ATGAAAATTGATTCTTATAA+AGG | - | chr5_1:51889074-51889093 | Msa0736060:intron | 15.0% |
| !! | ATTAAGTAGTTTATTCATAT+AGG | - | chr5_1:51890408-51890427 | Msa0736060:intron | 15.0% |
| !! | ATAGTAAATAAAATTTATGC+AGG | + | chr5_1:51891117-51891136 | None:intergenic | 15.0% |
| !!! | TTACAAGTTATTTTAATTTG+CGG | - | chr5_1:51891180-51891199 | Msa0736060:intron | 15.0% |
| !! | AAATAAAACATTACATGATT+TGG | + | chr5_1:51891330-51891349 | None:intergenic | 15.0% |
| !! | ATTTAATAAACTAAGCATAA+GGG | - | chr5_1:51891882-51891901 | Msa0736060:intron | 15.0% |
| !! | AATATGAATATATGAAAAAG+AGG | + | chr5_1:51891946-51891965 | None:intergenic | 15.0% |
| !! | ATTGCATAATGATTATTATT+AGG | - | chr5_1:51891975-51891994 | Msa0736060:intron | 15.0% |
| !! | AAAGATTTAGACATTATATT+TGG | + | chr5_1:51892347-51892366 | None:intergenic | 15.0% |
| !!! | TTAAGGGTTAATTATGTTTT+TGG | - | chr5_1:51882442-51882461 | Msa0736060:three_prime_UTR | 20.0% |
| !! | TAAACAAAATTTACTATAGC+AGG | - | chr5_1:51882850-51882869 | Msa0736060:CDS | 20.0% |
| !! | AAACAAAATTTACTATAGCA+GGG | - | chr5_1:51882851-51882870 | Msa0736060:CDS | 20.0% |
| !!! | TTTCACACAAAATATGTTTT+TGG | + | chr5_1:51882971-51882990 | None:intergenic | 20.0% |
| !!! | TCTAATGGATAAGATTAAAA+TGG | + | chr5_1:51883286-51883305 | None:intergenic | 20.0% |
| !! | GACATTATTATTCCAAAAAA+GGG | + | chr5_1:51883632-51883651 | None:intergenic | 20.0% |
| !! | TTTCAATATTTCTCTAATTG+AGG | - | chr5_1:51883693-51883712 | Msa0736060:CDS | 20.0% |
| !! | GTAACAATATCATATTAAAG+TGG | - | chr5_1:51883850-51883869 | Msa0736060:CDS | 20.0% |
| !! | GATTTATCCTTAATGTATTT+AGG | + | chr5_1:51884205-51884224 | None:intergenic | 20.0% |
| !! | AAGCTATAGAAATACATATT+TGG | - | chr5_1:51884225-51884244 | Msa0736060:intron | 20.0% |
| !!! | TTTTTTAAATATTCACAGTG+CGG | + | chr5_1:51884340-51884359 | None:intergenic | 20.0% |
| !!! | TCTTTAAGAGAGAAAAAATA+GGG | + | chr5_1:51884493-51884512 | None:intergenic | 20.0% |
| !!! | ATAGGAAAATTTGTTTTGAT+TGG | + | chr5_1:51884591-51884610 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGAGAAAAATAGG+GGG | + | chr5_1:51884784-51884803 | None:intergenic | 20.0% |
| !!! | CAAAATGATAAATTAAGTTG+AGG | + | chr5_1:51885048-51885067 | None:intergenic | 20.0% |
| !! | AAATGTATTATTTACTGTGT+TGG | + | chr5_1:51885630-51885649 | None:intergenic | 20.0% |
| !! | GTTATTTAAGAAGATCTTAA+GGG | + | chr5_1:51885743-51885762 | None:intergenic | 20.0% |
| !!! | TGTTATTTAAGAAGATCTTA+AGG | + | chr5_1:51885744-51885763 | None:intergenic | 20.0% |
| !! | ACTTCTCTTATAATATAACA+TGG | - | chr5_1:51885829-51885848 | Msa0736060:CDS | 20.0% |
| !! | AGTTAATTGCTCAAAATAAA+TGG | + | chr5_1:51885872-51885891 | None:intergenic | 20.0% |
| !!! | AGAAATGAGAAATTTTTTTG+TGG | + | chr5_1:51886074-51886093 | None:intergenic | 20.0% |
| !! | ATATGTTAGATTCTATTTAG+TGG | - | chr5_1:51886126-51886145 | Msa0736060:intron | 20.0% |
| !! | TATTGAAATGGATAAAATGA+AGG | - | chr5_1:51886266-51886285 | Msa0736060:intron | 20.0% |
| !! | ATTGAAATGGATAAAATGAA+GGG | - | chr5_1:51886267-51886286 | Msa0736060:intron | 20.0% |
| !! | ATGTGTTTGAAAAATTAGAA+GGG | - | chr5_1:51886296-51886315 | Msa0736060:CDS | 20.0% |
| !!! | TTTCAATAAACAATTTTCCT+CGG | - | chr5_1:51886515-51886534 | Msa0736060:CDS | 20.0% |
| !!! | ACATATATATGCAAGTATTT+TGG | - | chr5_1:51886724-51886743 | Msa0736060:CDS | 20.0% |
| !! | TAATAGATATTGTATTCTCT+TGG | - | chr5_1:51886985-51887004 | Msa0736060:intron | 20.0% |
| !! | AAGAATTCATTATCTTGAAT+CGG | + | chr5_1:51887434-51887453 | None:intergenic | 20.0% |
| !! | ATAAAAAACTACTCTCATAT+AGG | - | chr5_1:51888059-51888078 | Msa0736060:intron | 20.0% |
| !! | TCTCATATAGGTTATATTTA+TGG | - | chr5_1:51888071-51888090 | Msa0736060:intron | 20.0% |
| !!! | ACAGTTTAAATCTAATTTGT+TGG | - | chr5_1:51888490-51888509 | Msa0736060:intron | 20.0% |
| !! | TTGATATTGCAAAAAAAACA+TGG | + | chr5_1:51888563-51888582 | None:intergenic | 20.0% |
| !!! | CATATTTTTCATACAAGAAA+CGG | - | chr5_1:51889306-51889325 | Msa0736060:intron | 20.0% |
| !! | ATGATAAAAAGTTAAGTGTT+GGG | - | chr5_1:51889414-51889433 | Msa0736060:intron | 20.0% |
| !!! | ATGAAAATATTTAGAGTTCT+TGG | - | chr5_1:51889554-51889573 | Msa0736060:intron | 20.0% |
| !!! | TGAAAATATTTAGAGTTCTT+GGG | - | chr5_1:51889555-51889574 | Msa0736060:intron | 20.0% |
| !! | CAAATGATTTATCTTAGAAA+TGG | + | chr5_1:51890367-51890386 | None:intergenic | 20.0% |
| !!! | CCAACAAAGTATTAATTAAT+TGG | + | chr5_1:51890501-51890520 | None:intergenic | 20.0% |
| !! | CCAATTAATTAATACTTTGT+TGG | - | chr5_1:51890498-51890517 | Msa0736060:intron | 20.0% |
| !! | AGAATGATATAATACGATAA+AGG | - | chr5_1:51891041-51891060 | Msa0736060:intron | 20.0% |
| !! | GAATGATATAATACGATAAA+GGG | - | chr5_1:51891042-51891061 | Msa0736060:intron | 20.0% |
| !! | CATTTAATAAACTAAGCATA+AGG | - | chr5_1:51891881-51891900 | Msa0736060:intron | 20.0% |
| !! | ATAATTCTTGAATGTATTCA+AGG | - | chr5_1:51892209-51892228 | Msa0736060:intron | 20.0% |
| !!! | TATGTATTTTGTTCACAAAT+TGG | - | chr5_1:51892435-51892454 | Msa0736060:intron | 20.0% |
| ! | AGAATATGAATCAAAGACAT+CGG | + | chr5_1:51882108-51882127 | None:intergenic | 25.0% |
| ! | ACTTTATTGATGGAAAAAAG+TGG | + | chr5_1:51882184-51882203 | None:intergenic | 25.0% |
| !!! | TTGTTTTACGGTTTCTTTTT+TGG | - | chr5_1:51882229-51882248 | Msa0736060:three_prime_UTR | 25.0% |
| ! | CATTCAAAAAAGATGACAAA+GGG | + | chr5_1:51882267-51882286 | None:intergenic | 25.0% |
| ! | ACATTCAAAAAAGATGACAA+AGG | + | chr5_1:51882268-51882287 | None:intergenic | 25.0% |
| !!! | TGAACTTTTGAAGATTGATT+TGG | - | chr5_1:51882331-51882350 | Msa0736060:three_prime_UTR | 25.0% |
| ! | TGCAATGTTGGAAAATAAAT+TGG | - | chr5_1:51882388-51882407 | Msa0736060:three_prime_UTR | 25.0% |
| !! | TACAAGATTGCAATTTTGTA+GGG | + | chr5_1:51882469-51882488 | None:intergenic | 25.0% |
| !! | TTACAAGATTGCAATTTTGT+AGG | + | chr5_1:51882470-51882489 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr5_1:51882561-51882580 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr5_1:51882626-51882645 | Msa0736060:three_prime_UTR | 25.0% |
| ! | AAGTAAGGATTAAACATAGA+AGG | - | chr5_1:51882928-51882947 | Msa0736060:intron | 25.0% |
| !! | TGTGTGAGTTCTATTTTATT+TGG | + | chr5_1:51883011-51883030 | None:intergenic | 25.0% |
| ! | AAACTATTGGATTTGAATGA+TGG | + | chr5_1:51883188-51883207 | None:intergenic | 25.0% |
| ! | AAGAAATAAATCCACAAAAG+TGG | + | chr5_1:51883218-51883237 | None:intergenic | 25.0% |
| ! | GGACATTATTATTCCAAAAA+AGG | + | chr5_1:51883633-51883652 | None:intergenic | 25.0% |
| !! | ATTTCTCCAAAGTATCTATA+TGG | + | chr5_1:51883772-51883791 | None:intergenic | 25.0% |
| ! | TGGAGAAATTAAAGTTAGAA+TGG | - | chr5_1:51883783-51883802 | Msa0736060:CDS | 25.0% |
| ! | AGAAATTAAAGTTAGAATGG+TGG | - | chr5_1:51883786-51883805 | Msa0736060:CDS | 25.0% |
| ! | CTTCGGTAGATAATATAATT+TGG | - | chr5_1:51884081-51884100 | Msa0736060:intron | 25.0% |
| !! | GAAATCCAAATACAACATTT+TGG | - | chr5_1:51884103-51884122 | Msa0736060:intron | 25.0% |
| ! | GATTTCCAAAATGTTGTATT+TGG | + | chr5_1:51884111-51884130 | None:intergenic | 25.0% |
| !!! | CGTCTTAAAATTGTTGTTTT+TGG | + | chr5_1:51884133-51884152 | None:intergenic | 25.0% |
| ! | TGTGTCAAAAAATTAAGAAG+GGG | + | chr5_1:51884428-51884447 | None:intergenic | 25.0% |
| ! | GTGTGTCAAAAAATTAAGAA+GGG | + | chr5_1:51884429-51884448 | None:intergenic | 25.0% |
| !! | GTCTTTAAGAGAGAAAAAAT+AGG | + | chr5_1:51884494-51884513 | None:intergenic | 25.0% |
| !! | AAGGTGTAAGATTGTATTTT+TGG | + | chr5_1:51884704-51884723 | None:intergenic | 25.0% |
| ! | ATGTTCTCTTTCAACTAAAT+AGG | + | chr5_1:51885091-51885110 | None:intergenic | 25.0% |
| !! | CTCTATTTTGTGTTTGTTTA+TGG | + | chr5_1:51885317-51885336 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTGGGTTAGATTT+GGG | + | chr5_1:51885503-51885522 | None:intergenic | 25.0% |
| !!! | AATTTTTGTTGGGTTAGATT+TGG | + | chr5_1:51885504-51885523 | None:intergenic | 25.0% |
| !! | GTGATTAGTGAATTTTTGTT+GGG | + | chr5_1:51885514-51885533 | None:intergenic | 25.0% |
| ! | CAACAAAAATTCACTAATCA+CGG | - | chr5_1:51885513-51885532 | Msa0736060:CDS | 25.0% |
| ! | AACAAAAATTCACTAATCAC+GGG | - | chr5_1:51885514-51885533 | Msa0736060:CDS | 25.0% |
| !!! | ATGAGAAATTTTTTTGTGGA+TGG | + | chr5_1:51886070-51886089 | None:intergenic | 25.0% |
| ! | ATACAAACAAACCAAAATGA+TGG | - | chr5_1:51886220-51886239 | Msa0736060:intron | 25.0% |
| ! | CATGTGTTTGAAAAATTAGA+AGG | - | chr5_1:51886295-51886314 | Msa0736060:CDS | 25.0% |
| ! | TGTGTTTGAAAAATTAGAAG+GGG | - | chr5_1:51886297-51886316 | Msa0736060:CDS | 25.0% |
| ! | TAATAACACATTAATTACCG+AGG | + | chr5_1:51886535-51886554 | None:intergenic | 25.0% |
| ! | AGTACAAAGCTTCTATAAAA+AGG | - | chr5_1:51886624-51886643 | Msa0736060:CDS | 25.0% |
| ! | GTACAAAGCTTCTATAAAAA+GGG | - | chr5_1:51886625-51886644 | Msa0736060:CDS | 25.0% |
| !! | CTTGCATATATATGTTACTT+AGG | + | chr5_1:51886719-51886738 | None:intergenic | 25.0% |
| ! | AAAAGGGAATAAAGTTGTTA+AGG | + | chr5_1:51887173-51887192 | None:intergenic | 25.0% |
| !!! | TTCATGATAAATTTGACTTG+AGG | - | chr5_1:51888150-51888169 | Msa0736060:intron | 25.0% |
| ! | TGATTATAAGATCTAAAGGA+AGG | + | chr5_1:51888355-51888374 | None:intergenic | 25.0% |
| ! | ATGATCCTATTAAACTCATA+TGG | - | chr5_1:51888847-51888866 | Msa0736060:intron | 25.0% |
| ! | TGATCCTATTAAACTCATAT+GGG | - | chr5_1:51888848-51888867 | Msa0736060:intron | 25.0% |
| !! | ATTGATTCTTATAAAGGTCT+TGG | - | chr5_1:51889080-51889099 | Msa0736060:intron | 25.0% |
| ! | ATACATATCATATTGCTCTT+CGG | + | chr5_1:51889210-51889229 | None:intergenic | 25.0% |
| !! | CACTTAACTTTTTATCATCT+TGG | + | chr5_1:51889412-51889431 | None:intergenic | 25.0% |
| ! | GATGATAAAAAGTTAAGTGT+TGG | - | chr5_1:51889413-51889432 | Msa0736060:intron | 25.0% |
| !!! | CCATATTTTGTTGTAAATTG+AGG | + | chr5_1:51889746-51889765 | None:intergenic | 25.0% |
| ! | CCTCAATTTACAACAAAATA+TGG | - | chr5_1:51889743-51889762 | Msa0736060:intron | 25.0% |
| ! | TCTTCTAAATTGTACACAAA+TGG | - | chr5_1:51889821-51889840 | Msa0736060:intron | 25.0% |
| !! | TTTTTCATAAAAAGCCTGTT+CGG | - | chr5_1:51890062-51890081 | Msa0736060:intron | 25.0% |
| ! | TTTCTTTCTATAAGTTCTTC+AGG | - | chr5_1:51890193-51890212 | Msa0736060:intron | 25.0% |
| ! | ATGATTTATCTTAGAAATGG+TGG | + | chr5_1:51890364-51890383 | None:intergenic | 25.0% |
| !! | TCCGAGTGAAATTTTTATTA+TGG | - | chr5_1:51890610-51890629 | Msa0736060:intron | 25.0% |
| ! | GCCATAATAAAAATTTCACT+CGG | + | chr5_1:51890614-51890633 | None:intergenic | 25.0% |
| ! | ATTTGAAAGATTAGTACTGT+TGG | - | chr5_1:51890692-51890711 | Msa0736060:intron | 25.0% |
| ! | TTTGAAAGATTAGTACTGTT+GGG | - | chr5_1:51890693-51890712 | Msa0736060:intron | 25.0% |
| ! | TCTTTCGTTAACATATCTAA+GGG | - | chr5_1:51890876-51890895 | Msa0736060:intron | 25.0% |
| ! | ATTACTGGAAGACTTAAAAA+GGG | - | chr5_1:51890963-51890982 | Msa0736060:intron | 25.0% |
| !!! | AAGTTATTTTAATTTGCGGA+TGG | - | chr5_1:51891184-51891203 | Msa0736060:intron | 25.0% |
| ! | TTTATTTGTGTAGCAGAATT+TGG | - | chr5_1:51891343-51891362 | Msa0736060:intron | 25.0% |
| ! | ATCTACTGTTAGATCAAATT+TGG | - | chr5_1:51891531-51891550 | Msa0736060:intron | 25.0% |
| ! | TCTACTGTTAGATCAAATTT+GGG | - | chr5_1:51891532-51891551 | Msa0736060:intron | 25.0% |
| ! | ATATATGTCAGCATTTCATA+AGG | + | chr5_1:51891641-51891660 | None:intergenic | 25.0% |
| !! | ATTTTTGCAGATATTGTCTT+TGG | - | chr5_1:51891689-51891708 | Msa0736060:intron | 25.0% |
| ! | TTTCTTGAGTTTGTAAAGAA+AGG | - | chr5_1:51892071-51892090 | Msa0736060:intron | 25.0% |
| ACGGATAACAACTTTATTGA+TGG | + | chr5_1:51882194-51882213 | None:intergenic | 30.0% | |
| !! | TTTGAAGATTGATTTGGTAG+TGG | - | chr5_1:51882337-51882356 | Msa0736060:three_prime_UTR | 30.0% |
| TGGAATTACATGATTAGTGT+TGG | - | chr5_1:51882357-51882376 | Msa0736060:three_prime_UTR | 30.0% | |
| ! | ATAGAAGGTCGCAATTTTAT+AGG | - | chr5_1:51882943-51882962 | Msa0736060:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | - | chr5_1:51882944-51882963 | Msa0736060:intron | 30.0% |
| CTCATAAATTTAGCGTATGA+TGG | - | chr5_1:51883122-51883141 | Msa0736060:CDS | 30.0% | |
| AAATAAATCCACAAAAGTGG+AGG | + | chr5_1:51883215-51883234 | None:intergenic | 30.0% | |
| ! | AGTGTTGTTGAACTGATTAA+TGG | - | chr5_1:51883253-51883272 | Msa0736060:intron | 30.0% |
| !!! | TCTGTTTTTTTTGAACTGAG+TGG | + | chr5_1:51883369-51883388 | None:intergenic | 30.0% |
| ! | AAAGAGTTTCATTGAGTTGT+CGG | - | chr5_1:51883391-51883410 | Msa0736060:intron | 30.0% |
| TTAAATCGAAAAAGGGACTA+TGG | + | chr5_1:51883518-51883537 | None:intergenic | 30.0% | |
| AGGGACATTAAATCGAAAAA+GGG | + | chr5_1:51883525-51883544 | None:intergenic | 30.0% | |
| AAGGGACATTAAATCGAAAA+AGG | + | chr5_1:51883526-51883545 | None:intergenic | 30.0% | |
| ! | TTTTCGATTTAATGTCCCTT+CGG | - | chr5_1:51883526-51883545 | Msa0736060:intron | 30.0% |
| AAGGGACTTATATTATCGAA+GGG | + | chr5_1:51883579-51883598 | None:intergenic | 30.0% | |
| TTCGATAATATAAGTCCCTT+CGG | - | chr5_1:51883579-51883598 | Msa0736060:intron | 30.0% | |
| ATAGTTCTCTTTATTCCGAA+GGG | + | chr5_1:51883597-51883616 | None:intergenic | 30.0% | |
| AATAGTTCTCTTTATTCCGA+AGG | + | chr5_1:51883598-51883617 | None:intergenic | 30.0% | |
| !!! | TAACATCATAGTCCCTTTTT+TGG | - | chr5_1:51883617-51883636 | Msa0736060:CDS | 30.0% |
| AAGAACATTCTTAATTCCGA+CGG | + | chr5_1:51883655-51883674 | None:intergenic | 30.0% | |
| GTAATATCACCATATTTGAG+TGG | - | chr5_1:51883738-51883757 | Msa0736060:CDS | 30.0% | |
| ATATTGTTACCACTCTGTTA+TGG | + | chr5_1:51883840-51883859 | None:intergenic | 30.0% | |
| ! | TAGTATGTCTTGCACAATTT+TGG | - | chr5_1:51884000-51884019 | Msa0736060:intron | 30.0% |
| ! | AGTATGTCTTGCACAATTTT+GGG | - | chr5_1:51884001-51884020 | Msa0736060:intron | 30.0% |
| GAACCTCAATAAAACTTCTT+CGG | + | chr5_1:51884175-51884194 | None:intergenic | 30.0% | |
| AGTTGTCCCTAAATACATTA+AGG | - | chr5_1:51884195-51884214 | Msa0736060:intron | 30.0% | |
| ! | AAGGGGTAAGATTGTATTTT+TGG | + | chr5_1:51884411-51884430 | None:intergenic | 30.0% |
| GGTGTGTCAAAAAATTAAGA+AGG | + | chr5_1:51884430-51884449 | None:intergenic | 30.0% | |
| GATGTGTCAAAAGATTAAGA+AGG | + | chr5_1:51884723-51884742 | None:intergenic | 30.0% | |
| GTTGAAACAAAACACACAAA+AGG | + | chr5_1:51884759-51884778 | None:intergenic | 30.0% | |
| !! | GTGACAAAGTTGTGTTTTTA+CGG | + | chr5_1:51885008-51885027 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTTGTGGCCG+AGG | - | chr5_1:51885168-51885187 | Msa0736060:CDS | 30.0% |
| GATAGTGCATAATATATCCA+AGG | + | chr5_1:51885207-51885226 | None:intergenic | 30.0% | |
| AGAAATAGATAAAGAGTCTG+AGG | - | chr5_1:51885409-51885428 | Msa0736060:CDS | 30.0% | |
| GAAATAGATAAAGAGTCTGA+GGG | - | chr5_1:51885410-51885429 | Msa0736060:CDS | 30.0% | |
| ! | CGTGATTAGTGAATTTTTGT+TGG | + | chr5_1:51885515-51885534 | None:intergenic | 30.0% |
| !! | CCATTAATTGTTTTTCTCAG+AGG | + | chr5_1:51885599-51885618 | None:intergenic | 30.0% |
| ! | CCTCTGAGAAAAACAATTAA+TGG | - | chr5_1:51885596-51885615 | Msa0736060:CDS | 30.0% |
| TGTATTATTTACTGTGTTGG+CGG | + | chr5_1:51885627-51885646 | None:intergenic | 30.0% | |
| ATTTAAGAAGATCTTAAGGG+AGG | + | chr5_1:51885740-51885759 | None:intergenic | 30.0% | |
| ATTGTGGTTGATCAATGAAA+AGG | + | chr5_1:51886045-51886064 | None:intergenic | 30.0% | |
| ! | ATCCCTTTTATCATTAACGT+TGG | - | chr5_1:51886364-51886383 | Msa0736060:CDS | 30.0% |
| AGCCAACGTTAATGATAAAA+GGG | + | chr5_1:51886369-51886388 | None:intergenic | 30.0% | |
| AAGCCAACGTTAATGATAAA+AGG | + | chr5_1:51886370-51886389 | None:intergenic | 30.0% | |
| ! | TGAAAATCTTTTCAAACACC+AGG | - | chr5_1:51887028-51887047 | Msa0736060:intron | 30.0% |
| AATGAAAAGTGAAAAGAACC+TGG | + | chr5_1:51887049-51887068 | None:intergenic | 30.0% | |
| !! | GTTGAAAGTTTTATCCTCTA+TGG | - | chr5_1:51887333-51887352 | Msa0736060:intron | 30.0% |
| CTTAATGAAATCTCAACTGT+TGG | - | chr5_1:51887365-51887384 | Msa0736060:intron | 30.0% | |
| ! | AAGATACTTTTACTGAGACA+TGG | + | chr5_1:51887709-51887728 | None:intergenic | 30.0% |
| !! | AAGAATGTCTTTGGAATCTT+CGG | + | chr5_1:51887759-51887778 | None:intergenic | 30.0% |
| TTTGTTGACAAGAATGTCTT+TGG | + | chr5_1:51887768-51887787 | None:intergenic | 30.0% | |
| TTACATGAAGTCATTCTTTC+CGG | - | chr5_1:51887791-51887810 | Msa0736060:intron | 30.0% | |
| ATTTGATAGAACAGGTCATT+TGG | + | chr5_1:51887924-51887943 | None:intergenic | 30.0% | |
| TCACTGTAATTTGATAGAAC+AGG | + | chr5_1:51887932-51887951 | None:intergenic | 30.0% | |
| AGTGAAGAATATTACTGATG+AGG | - | chr5_1:51887947-51887966 | Msa0736060:intron | 30.0% | |
| AATATTACTGATGAGGTGTA+CGG | - | chr5_1:51887954-51887973 | Msa0736060:intron | 30.0% | |
| AAGTACTTTGACAAGACTAT+AGG | + | chr5_1:51888125-51888144 | None:intergenic | 30.0% | |
| !! | TATAGTCTTGTCAAAGTACT+TGG | - | chr5_1:51888124-51888143 | Msa0736060:intron | 30.0% |
| TTTCCAAATACGAACATTTG+TGG | + | chr5_1:51888222-51888241 | None:intergenic | 30.0% | |
| ATTCTTGGTATTACAGAGAA+TGG | - | chr5_1:51888401-51888420 | Msa0736060:intron | 30.0% | |
| TTGTAATGCAGTTGAAATTG+AGG | + | chr5_1:51888449-51888468 | None:intergenic | 30.0% | |
| CAAAAACAACCAAAACATTG+AGG | + | chr5_1:51888516-51888535 | None:intergenic | 30.0% | |
| AATAGCAGTTGTAGTAATGA+TGG | + | chr5_1:51888586-51888605 | None:intergenic | 30.0% | |
| ACCAAAGACAGTGTTATAAA+TGG | - | chr5_1:51888650-51888669 | Msa0736060:intron | 30.0% | |
| ACCATTTATAACACTGTCTT+TGG | + | chr5_1:51888654-51888673 | None:intergenic | 30.0% | |
| TGCTTATCAGAAGAAAATCT+CGG | - | chr5_1:51888720-51888739 | Msa0736060:intron | 30.0% | |
| AGTTTAATAGGATCATTGTG+AGG | + | chr5_1:51888843-51888862 | None:intergenic | 30.0% | |
| GATCCTATTAAACTCATATG+GGG | - | chr5_1:51888849-51888868 | Msa0736060:intron | 30.0% | |
| !!! | TACTGTTTTTTACCAATGAC+AGG | - | chr5_1:51889140-51889159 | Msa0736060:intron | 30.0% |
| !!! | ACTGTTTTTTACCAATGACA+GGG | - | chr5_1:51889141-51889160 | Msa0736060:intron | 30.0% |
| TACATATCATATTGCTCTTC+GGG | + | chr5_1:51889209-51889228 | None:intergenic | 30.0% | |
| GAGTTTGTGAAGAAGAAATA+TGG | - | chr5_1:51889359-51889378 | Msa0736060:intron | 30.0% | |
| !!! | TGGAACAGTTTTTAAGACAA+AGG | - | chr5_1:51889444-51889463 | Msa0736060:intron | 30.0% |
| ! | AGACAAAGGTTCTTTTTCTT+TGG | - | chr5_1:51889458-51889477 | Msa0736060:intron | 30.0% |
| ! | AAAGGTTCTTTTTCTTTGGA+GGG | - | chr5_1:51889462-51889481 | Msa0736060:intron | 30.0% |
| TCAATTGAAAGGAAACATGT+TGG | + | chr5_1:51889527-51889546 | None:intergenic | 30.0% | |
| AACATGTTTCCTTTCAATTG+AGG | - | chr5_1:51889526-51889545 | Msa0736060:intron | 30.0% | |
| !! | GTTGATTTTCACAATCATCA+TGG | + | chr5_1:51889634-51889653 | None:intergenic | 30.0% |
| TCAAATAAACAAATCCGAAC+AGG | + | chr5_1:51890079-51890098 | None:intergenic | 30.0% | |
| ! | TTTTCATAAGCTCTCTCAAA+TGG | + | chr5_1:51890132-51890151 | None:intergenic | 30.0% |
| CTGACAATGTGTTTATAAGT+GGG | - | chr5_1:51890297-51890316 | Msa0736060:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr5_1:51890298-51890317 | Msa0736060:intron | 30.0% | |
| !! | ATTATCGCTTTTACGTAGTT+TGG | - | chr5_1:51890441-51890460 | Msa0736060:intron | 30.0% |
| TTTACTTGGAAACATGCTTA+TGG | + | chr5_1:51890763-51890782 | None:intergenic | 30.0% | |
| ! | GCTTATTTCTCTTACAATGT+TGG | + | chr5_1:51890814-51890833 | None:intergenic | 30.0% |
| CTCTTTCGTTAACATATCTA+AGG | - | chr5_1:51890875-51890894 | Msa0736060:intron | 30.0% | |
| GATTACTGGAAGACTTAAAA+AGG | - | chr5_1:51890962-51890981 | Msa0736060:intron | 30.0% | |
| ATGTATTGCGTGACAATATT+TGG | - | chr5_1:51891300-51891319 | Msa0736060:intron | 30.0% | |
| CGAACATTAACTGAAAAGTT+AGG | + | chr5_1:51891466-51891485 | None:intergenic | 30.0% | |
| ! | AACATTAGCTCTTTGTCTAT+TGG | + | chr5_1:51891578-51891597 | None:intergenic | 30.0% |
| AGATATTGTCTTTGGATTGT+AGG | - | chr5_1:51891697-51891716 | Msa0736060:intron | 30.0% | |
| CACAGAGTTACTATTAACTA+AGG | + | chr5_1:51891734-51891753 | None:intergenic | 30.0% | |
| TAGTTAATAGTAACTCTGTG+TGG | - | chr5_1:51891734-51891753 | Msa0736060:intron | 30.0% | |
| TAAAATCATTGAACCGTACA+CGG | + | chr5_1:51892161-51892180 | None:intergenic | 30.0% | |
| CTTGAATGTATTCAAGGATT+TGG | - | chr5_1:51892215-51892234 | Msa0736060:intron | 30.0% | |
| CTAAATCTTTATGCTACACA+AGG | - | chr5_1:51892357-51892376 | Msa0736060:intron | 30.0% | |
| AGTAAAAACTTGTCACGATT+TGG | - | chr5_1:51892515-51892534 | Msa0736060:five_prime_UTR | 30.0% | |
| ! | TAAATTGAGACTGGAGCTTT+TGG | + | chr5_1:51882034-51882053 | None:intergenic | 35.0% |
| TTGGAACATTAGTGCAATGT+TGG | - | chr5_1:51882376-51882395 | Msa0736060:three_prime_UTR | 35.0% | |
| ! | CAAGTTTAGAACACTACGAA+AGG | + | chr5_1:51882788-51882807 | None:intergenic | 35.0% |
| TTGTGTGAAACAATAGAGTG+TGG | - | chr5_1:51882981-51883000 | Msa0736060:CDS | 35.0% | |
| TGTGTGAAACAATAGAGTGT+GGG | - | chr5_1:51882982-51883001 | Msa0736060:CDS | 35.0% | |
| AAGTGGAGGAAACAAACTAT+TGG | + | chr5_1:51883201-51883220 | None:intergenic | 35.0% | |
| AATCAGTTCAACAACACTTG+TGG | + | chr5_1:51883251-51883270 | None:intergenic | 35.0% | |
| GACAACTCAATGAAACTCTT+TGG | + | chr5_1:51883392-51883411 | None:intergenic | 35.0% | |
| ! | AAGAGTTTCATTGAGTTGTC+GGG | - | chr5_1:51883392-51883411 | Msa0736060:intron | 35.0% |
| AGAACACTCTTAATTCCGAA+GGG | + | chr5_1:51883490-51883509 | None:intergenic | 35.0% | |
| AAGAACACTCTTAATTCCGA+AGG | + | chr5_1:51883491-51883510 | None:intergenic | 35.0% | |
| AGACCATTCTTAATTCCGAA+GGG | + | chr5_1:51883544-51883563 | None:intergenic | 35.0% | |
| AAGACCATTCTTAATTCCGA+AGG | + | chr5_1:51883545-51883564 | None:intergenic | 35.0% | |
| GAAGGGACTTATATTATCGA+AGG | + | chr5_1:51883580-51883599 | None:intergenic | 35.0% | |
| TTGGAATAATAATGTCCCGT+CGG | - | chr5_1:51883636-51883655 | Msa0736060:CDS | 35.0% | |
| AGAACATTCTTAATTCCGAC+GGG | + | chr5_1:51883654-51883673 | None:intergenic | 35.0% | |
| GTAGTGCCATATAGATACTT+TGG | - | chr5_1:51883763-51883782 | Msa0736060:CDS | 35.0% | |
| TGCTTAAGACCACTCAAATA+TGG | + | chr5_1:51883817-51883836 | None:intergenic | 35.0% | |
| GTGGTTTCAATATCAAAGAG+TGG | - | chr5_1:51883869-51883888 | Msa0736060:CDS | 35.0% | |
| ACTCAACCTAGTAACAACTT+CGG | - | chr5_1:51884064-51884083 | Msa0736060:intron | 35.0% | |
| TATCTACCGAAGTTGTTACT+AGG | + | chr5_1:51884073-51884092 | None:intergenic | 35.0% | |
| !!! | CTACCGAAGAAGTTTTATTG+AGG | - | chr5_1:51884169-51884188 | Msa0736060:intron | 35.0% |
| TGCATAATATATCCAAGGTC+CGG | + | chr5_1:51885202-51885221 | None:intergenic | 35.0% | |
| ! | TTTTCCCAACTTATTGTTCC+TGG | - | chr5_1:51885959-51885978 | Msa0736060:intron | 35.0% |
| TGATCCAGGAACAATAAGTT+GGG | + | chr5_1:51885966-51885985 | None:intergenic | 35.0% | |
| TTGATCCAGGAACAATAAGT+TGG | + | chr5_1:51885967-51885986 | None:intergenic | 35.0% | |
| AACTTATTGTTCCTGGATCA+AGG | - | chr5_1:51885966-51885985 | Msa0736060:intron | 35.0% | |
| AAATTAAACCACCTTGATCC+AGG | + | chr5_1:51885980-51885999 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTGGATGGACATTG+TGG | + | chr5_1:51886061-51886080 | None:intergenic | 35.0% |
| !! | ATGAAGTGTTTTTCTCGCAA+TGG | + | chr5_1:51886175-51886194 | None:intergenic | 35.0% |
| ! | AGAAGCTTTGTACTACAACA+AGG | + | chr5_1:51886618-51886637 | None:intergenic | 35.0% |
| AAAACCAATGTCATCATGCA+TGG | + | chr5_1:51886863-51886882 | None:intergenic | 35.0% | |
| TTCATCAAAAGGGCTAACTA+AGG | - | chr5_1:51886906-51886925 | Msa0736060:intron | 35.0% | |
| GAAGAGATGTAATACCATTG+AGG | - | chr5_1:51886941-51886960 | Msa0736060:intron | 35.0% | |
| TGTATTCTCTTGGACTATAG+AGG | - | chr5_1:51886995-51887014 | Msa0736060:intron | 35.0% | |
| TCGAATAATTGAGATTTCGC+TGG | - | chr5_1:51887393-51887412 | Msa0736060:intron | 35.0% | |
| !! | TGGAGAGTTCTTTCTAGTTA+GGG | + | chr5_1:51887689-51887708 | None:intergenic | 35.0% |
| !! | ATGGAGAGTTCTTTCTAGTT+AGG | + | chr5_1:51887690-51887709 | None:intergenic | 35.0% |
| ! | AATGCAGTTTAATTTCGTGC+AGG | - | chr5_1:51887731-51887750 | Msa0736060:intron | 35.0% |
| ATATTACTGATGAGGTGTAC+GGG | - | chr5_1:51887955-51887974 | Msa0736060:intron | 35.0% | |
| GGAAAATATGAACCTGAAGT+CGG | - | chr5_1:51887981-51888000 | Msa0736060:intron | 35.0% | |
| ! | CTCAAGTCATACACACTTTT+TGG | + | chr5_1:51888035-51888054 | None:intergenic | 35.0% |
| TGACCACAAATGTTCGTATT+TGG | - | chr5_1:51888216-51888235 | Msa0736060:intron | 35.0% | |
| GTGATTCTTACCCTTGAATA+AGG | + | chr5_1:51888302-51888321 | None:intergenic | 35.0% | |
| !! | ATTTGTTGGCCTCAATGTTT+TGG | - | chr5_1:51888504-51888523 | Msa0736060:intron | 35.0% |
| !! | AAGAAGTATTCGCATTAGCA+AGG | + | chr5_1:51888614-51888633 | None:intergenic | 35.0% |
| GCTTATCAGAAGAAAATCTC+GGG | - | chr5_1:51888721-51888740 | Msa0736060:intron | 35.0% | |
| TATGTTTGTCACTGGAGAAT+AGG | + | chr5_1:51888751-51888770 | None:intergenic | 35.0% | |
| GATTTGACTATGTTTGTCAC+TGG | + | chr5_1:51888759-51888778 | None:intergenic | 35.0% | |
| !!! | GTTTTTGTTTTTCCAGTTCC+TGG | + | chr5_1:51888879-51888898 | None:intergenic | 35.0% |
| GTGTTCTGATTCTTAACTTC+AGG | + | chr5_1:51888926-51888945 | None:intergenic | 35.0% | |
| ! | CTTGGTGACATAGTTCTATT+TGG | - | chr5_1:51889038-51889057 | Msa0736060:intron | 35.0% |
| GAGAGTTATAGTCATGTGAA+AGG | - | chr5_1:51889281-51889300 | Msa0736060:intron | 35.0% | |
| TTTCATACAAGAAACGGTGT+AGG | - | chr5_1:51889312-51889331 | Msa0736060:intron | 35.0% | |
| ! | CAAAGGTTCTTTTTCTTTGG+AGG | - | chr5_1:51889461-51889480 | Msa0736060:intron | 35.0% |
| ATGTTTCCTTTCAATTGAGG+TGG | - | chr5_1:51889529-51889548 | Msa0736060:intron | 35.0% | |
| AATCATCATGGAAAGCTTGT+TGG | + | chr5_1:51889622-51889641 | None:intergenic | 35.0% | |
| !! | GAAACAAGTGCAGTTTTTAG+TGG | - | chr5_1:51889847-51889866 | Msa0736060:intron | 35.0% |
| CAATCAAGATACAACGTTTG+AGG | + | chr5_1:51889931-51889950 | None:intergenic | 35.0% | |
| CTCAAACGTTGTATCTTGAT+TGG | - | chr5_1:51889929-51889948 | Msa0736060:intron | 35.0% | |
| GCTGAGTTATAAACAGCTTA+TGG | + | chr5_1:51890170-51890189 | None:intergenic | 35.0% | |
| AATTGTGAAAGAGCTCACAT+CGG | - | chr5_1:51890250-51890269 | Msa0736060:intron | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr5_1:51890299-51890318 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr5_1:51890296-51890315 | Msa0736060:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr5_1:51890299-51890318 | Msa0736060:intron | 35.0% | |
| ! | AATCACAAACCAGTTTTGCA+GGG | - | chr5_1:51890323-51890342 | Msa0736060:intron | 35.0% |
| CCATCATAGAACTCTTTACT+TGG | + | chr5_1:51890777-51890796 | None:intergenic | 35.0% | |
| CCAAGTAAAGAGTTCTATGA+TGG | - | chr5_1:51890774-51890793 | Msa0736060:intron | 35.0% | |
| AAGCTATAACAAGCATTTCC+TGG | - | chr5_1:51890830-51890849 | Msa0736060:intron | 35.0% | |
| AGCTATAACAAGCATTTCCT+GGG | - | chr5_1:51890831-51890850 | Msa0736060:intron | 35.0% | |
| TAGCAGAATTTGGAAAGACA+AGG | - | chr5_1:51891353-51891372 | Msa0736060:intron | 35.0% | |
| ACAAGGAATAAAGTCAGCAT+AGG | - | chr5_1:51891370-51891389 | Msa0736060:intron | 35.0% | |
| CAAGGAATAAAGTCAGCATA+GGG | - | chr5_1:51891371-51891390 | Msa0736060:intron | 35.0% | |
| GTTAATGTTCGTTCTGTTGA+TGG | - | chr5_1:51891475-51891494 | Msa0736060:intron | 35.0% | |
| ACTGTTAGATCAAATTTGGG+TGG | - | chr5_1:51891535-51891554 | Msa0736060:intron | 35.0% | |
| TCAAATTTGGGTGGAAAAGT+TGG | - | chr5_1:51891544-51891563 | Msa0736060:intron | 35.0% | |
| AGCTAATGTTGCTATCACTA+GGG | - | chr5_1:51891588-51891607 | Msa0736060:intron | 35.0% | |
| AAAGGTTGTTCTTGATGCTA+TGG | - | chr5_1:51891759-51891778 | Msa0736060:intron | 35.0% | |
| TTGTTTCCATAATGCTGATG+AGG | - | chr5_1:51891789-51891808 | Msa0736060:intron | 35.0% | |
| GAAATTGGATCAAGCTATTG+AGG | - | chr5_1:51891816-51891835 | Msa0736060:intron | 35.0% | |
| CAGAAACATCTACTTTCTCT+AGG | - | chr5_1:51891911-51891930 | Msa0736060:intron | 35.0% | |
| AGTCGACAAAATATCAGATG+AGG | - | chr5_1:51892126-51892145 | Msa0736060:intron | 35.0% | |
| AAAATCATTGAACCGTACAC+GGG | + | chr5_1:51892160-51892179 | None:intergenic | 35.0% | |
| CGCGATTTGTGAAAACATAT+TGG | - | chr5_1:51892181-51892200 | Msa0736060:intron | 35.0% | |
| ! | GATTTGCTCAGTTGGATATT+AGG | - | chr5_1:51892379-51892398 | Msa0736060:intron | 35.0% |
| TTCACAAATTGGAGTTCACA+AGG | - | chr5_1:51892446-51892465 | Msa0736060:intron | 35.0% | |
| GGCTTGAAGTAAATTGAGAC+TGG | + | chr5_1:51882043-51882062 | None:intergenic | 40.0% | |
| CATCGGAAAATACATACCGA+AGG | + | chr5_1:51882091-51882110 | None:intergenic | 40.0% | |
| !!! | GAGCGCAACAATTTTTTGCA+GGG | + | chr5_1:51882529-51882548 | None:intergenic | 40.0% |
| !!! | TGAGCGCAACAATTTTTTGC+AGG | + | chr5_1:51882530-51882549 | None:intergenic | 40.0% |
| GTGTGAAACAATAGAGTGTG+GGG | - | chr5_1:51882983-51883002 | Msa0736060:CDS | 40.0% | |
| !! | GTTTGTTTCCTCCACTTTTG+TGG | - | chr5_1:51883204-51883223 | Msa0736060:CDS | 40.0% |
| GTTCAACAACACTTGTGGAT+AGG | + | chr5_1:51883246-51883265 | None:intergenic | 40.0% | |
| TGCGACAACAGTTACTCTAA+TGG | + | chr5_1:51883301-51883320 | None:intergenic | 40.0% | |
| CGTCAACACAAGTCAAGAAA+GGG | + | chr5_1:51883435-51883454 | None:intergenic | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | + | chr5_1:51883436-51883455 | None:intergenic | 40.0% | |
| !!! | TCTCCTTTTTTCTGTCCCTT+CGG | - | chr5_1:51883472-51883491 | Msa0736060:intron | 40.0% |
| ATTCCGAAGGGACAGAAAAA+AGG | + | chr5_1:51883478-51883497 | None:intergenic | 40.0% | |
| TGTCCCTTCGGAATTAAGAA+TGG | - | chr5_1:51883538-51883557 | Msa0736060:intron | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | - | chr5_1:51883805-51883824 | Msa0736060:CDS | 40.0% | |
| TCTTAAGCACCATAACAGAG+TGG | - | chr5_1:51883828-51883847 | Msa0736060:CDS | 40.0% | |
| ! | TGGTCTTAGTACCATATTCG+AGG | - | chr5_1:51883889-51883908 | Msa0736060:CDS | 40.0% |
| GGTCTTAGTACCATATTCGA+GGG | - | chr5_1:51883890-51883909 | Msa0736060:CDS | 40.0% | |
| GTCTTAGTACCATATTCGAG+GGG | - | chr5_1:51883891-51883910 | Msa0736060:CDS | 40.0% | |
| TCTTAGTACCATATTCGAGG+GGG | - | chr5_1:51883892-51883911 | Msa0736060:CDS | 40.0% | |
| CATAATATATCCAAGGTCCG+GGG | + | chr5_1:51885200-51885219 | None:intergenic | 40.0% | |
| GCATAATATATCCAAGGTCC+GGG | + | chr5_1:51885201-51885220 | None:intergenic | 40.0% | |
| TATCCCTACCAACTGAGTTA+AGG | - | chr5_1:51885223-51885242 | Msa0736060:CDS | 40.0% | |
| ! | TGACCTTAACTCAGTTGGTA+GGG | + | chr5_1:51885229-51885248 | None:intergenic | 40.0% |
| GACTCAGGTACAACACAAAA+CGG | - | chr5_1:51885443-51885462 | Msa0736060:CDS | 40.0% | |
| ACTCAGGTACAACACAAAAC+GGG | - | chr5_1:51885444-51885463 | Msa0736060:CDS | 40.0% | |
| TAGATTTGGGTCGATCTACT+TGG | + | chr5_1:51885490-51885509 | None:intergenic | 40.0% | |
| CAACCTAACAAACCCGTATA+CGG | - | chr5_1:51885539-51885558 | Msa0736060:CDS | 40.0% | |
| AACCTAACAAACCCGTATAC+GGG | - | chr5_1:51885540-51885559 | Msa0736060:CDS | 40.0% | |
| TTATTGTTCCTGGATCAAGG+TGG | - | chr5_1:51885969-51885988 | Msa0736060:intron | 40.0% | |
| GAAACCATGCATGATGACAT+TGG | - | chr5_1:51886856-51886875 | Msa0736060:intron | 40.0% | |
| !!! | ACATTGGTTTTGTGCTATGC+AGG | - | chr5_1:51886872-51886891 | Msa0736060:intron | 40.0% |
| GGCTAACTAAGGAACAAAGA+TGG | - | chr5_1:51886917-51886936 | Msa0736060:intron | 40.0% | |
| ACCATTGAGGAATGTCTTCA+TGG | - | chr5_1:51886954-51886973 | Msa0736060:intron | 40.0% | |
| ACCATGAAGACATTCCTCAA+TGG | + | chr5_1:51886958-51886977 | None:intergenic | 40.0% | |
| TTTATCCTCTATGGTCTCGT+TGG | - | chr5_1:51887342-51887361 | Msa0736060:intron | 40.0% | |
| GGGTTATAGATGTTGTGCAA+CGG | + | chr5_1:51887669-51887688 | None:intergenic | 40.0% | |
| !! | ATTCTTTCCGGCATTGATAG+AGG | - | chr5_1:51887803-51887822 | Msa0736060:intron | 40.0% |
| TGTGTTTCCTCTATCAATGC+CGG | + | chr5_1:51887813-51887832 | None:intergenic | 40.0% | |
| AAGCTTCTCTTTGCGAAATC+AGG | - | chr5_1:51887868-51887887 | Msa0736060:intron | 40.0% | |
| GATAGAACAGGTCATTTGGA+GGG | + | chr5_1:51887920-51887939 | None:intergenic | 40.0% | |
| TGATAGAACAGGTCATTTGG+AGG | + | chr5_1:51887921-51887940 | None:intergenic | 40.0% | |
| TATTACTGATGAGGTGTACG+GGG | - | chr5_1:51887956-51887975 | Msa0736060:intron | 40.0% | |
| AAAGTGTGTATGACTTGAGC+AGG | - | chr5_1:51888036-51888055 | Msa0736060:intron | 40.0% | |
| !! | AAGTGTTGCAGCCTTATTCA+AGG | - | chr5_1:51888288-51888307 | Msa0736060:intron | 40.0% |
| !! | AGTGTTGCAGCCTTATTCAA+GGG | - | chr5_1:51888289-51888308 | Msa0736060:intron | 40.0% |
| TGCAGTTGTGTCTTGATTCT+TGG | - | chr5_1:51888386-51888405 | Msa0736060:intron | 40.0% | |
| ! | GTGATCAAATGCAGTTGATG+TGG | - | chr5_1:51888423-51888442 | Msa0736060:intron | 40.0% |
| GGACCCCATATGAGTTTAAT+AGG | + | chr5_1:51888855-51888874 | None:intergenic | 40.0% | |
| !! | TTTGTTTTTCCAGTTCCTGG+TGG | + | chr5_1:51888876-51888895 | None:intergenic | 40.0% |
| TCCAACAAATACTGCAGTGT+TGG | - | chr5_1:51888956-51888975 | Msa0736060:intron | 40.0% | |
| ! | AACAAATACTGCAGTGTTGG+CGG | - | chr5_1:51888959-51888978 | Msa0736060:intron | 40.0% |
| ACGCTTTCATCACATAGCTA+AGG | - | chr5_1:51888989-51889008 | Msa0736060:intron | 40.0% | |
| TCACTTGACCATGGTTCATA+TGG | - | chr5_1:51889014-51889033 | Msa0736060:intron | 40.0% | |
| !! | AGGTCTTGGTGAAGTGTTTT+TGG | - | chr5_1:51889094-51889113 | Msa0736060:intron | 40.0% |
| !!! | GTTTTTTACCAATGACAGGG+TGG | - | chr5_1:51889144-51889163 | Msa0736060:intron | 40.0% |
| !! | GTTAAGTGTTGGGATGAGTA+TGG | - | chr5_1:51889424-51889443 | Msa0736060:intron | 40.0% |
| TCATCACCACCTCAATTGAA+AGG | + | chr5_1:51889538-51889557 | None:intergenic | 40.0% | |
| CCAAGCAAAGCAAAAACTCT+TGG | + | chr5_1:51889656-51889675 | None:intergenic | 40.0% | |
| ! | CCAAGAGTTTTTGCTTTGCT+TGG | - | chr5_1:51889653-51889672 | Msa0736060:intron | 40.0% |
| ! | GAGTTTTTGCTTTGCTTGGA+TGG | - | chr5_1:51889657-51889676 | Msa0736060:intron | 40.0% |
| ! | CAATCACAAACCAGTTTTGC+AGG | - | chr5_1:51890322-51890341 | Msa0736060:intron | 40.0% |
| ! | TTTTGTGTCAGATAGCTGAC+AGG | - | chr5_1:51890649-51890668 | Msa0736060:intron | 40.0% |
| TTTGTGTCAGATAGCTGACA+GGG | - | chr5_1:51890650-51890669 | Msa0736060:intron | 40.0% | |
| CTTGGAAACATGCTTATGGA+TGG | + | chr5_1:51890759-51890778 | None:intergenic | 40.0% | |
| TATAACAAGCATTTCCTGGG+AGG | - | chr5_1:51890834-51890853 | Msa0736060:intron | 40.0% | |
| AGGGATCATATCACCATACA+AGG | - | chr5_1:51891390-51891409 | Msa0736060:intron | 40.0% | |
| TCATGAACTTGTGCCTTGTA+TGG | + | chr5_1:51891406-51891425 | None:intergenic | 40.0% | |
| TGTACTGCTTCACTTTCTCT+TGG | + | chr5_1:51891432-51891451 | None:intergenic | 40.0% | |
| AGAGAAAGTGAAGCAGTACA+TGG | - | chr5_1:51891432-51891451 | Msa0736060:intron | 40.0% | |
| AGTGAAGCAGTACATGGTTT+CGG | - | chr5_1:51891438-51891457 | Msa0736060:intron | 40.0% | |
| GAGCTAATGTTGCTATCACT+AGG | - | chr5_1:51891587-51891606 | Msa0736060:intron | 40.0% | |
| TAGTAACTCTGTGTGGAGAA+AGG | - | chr5_1:51891741-51891760 | Msa0736060:intron | 40.0% | |
| TCTTGTCCTCATCAGCATTA+TGG | + | chr5_1:51891798-51891817 | None:intergenic | 40.0% | |
| TGCTGATGAGGACAAGAAAT+TGG | - | chr5_1:51891801-51891820 | Msa0736060:intron | 40.0% | |
| ! | TACACAAGGATTTGCTCAGT+TGG | - | chr5_1:51892371-51892390 | Msa0736060:intron | 40.0% |
| !! | CTTGTCACGATTTGGTGAAA+AGG | - | chr5_1:51892523-51892542 | Msa0736060:five_prime_UTR | 40.0% |
| ! | ATTGAGACTGGAGCTTTTGG+CGG | + | chr5_1:51882031-51882050 | None:intergenic | 45.0% |
| CGGAAAATACATACCGAAGG+TGG | + | chr5_1:51882088-51882107 | None:intergenic | 45.0% | |
| GCACTACGACCACTCAAATA+TGG | + | chr5_1:51883750-51883769 | None:intergenic | 45.0% | |
| GAGATTTACCCCCTCGAATA+TGG | + | chr5_1:51883903-51883922 | None:intergenic | 45.0% | |
| TTAACCGCACAGTTGTAGCT+GGG | - | chr5_1:51883947-51883966 | Msa0736060:intron | 45.0% | |
| ! | TAGCTGGGCGTGTTTTATCT+TGG | - | chr5_1:51883962-51883981 | Msa0736060:intron | 45.0% |
| GTGACCTTAACTCAGTTGGT+AGG | + | chr5_1:51885230-51885249 | None:intergenic | 45.0% | |
| GAGGGAATTAGATCTGACTC+AGG | - | chr5_1:51885428-51885447 | Msa0736060:CDS | 45.0% | |
| TTAAGCCAACGAGACCATAG+AGG | + | chr5_1:51887350-51887369 | None:intergenic | 45.0% | |
| TAGATGTTGTGCAACGGACA+TGG | + | chr5_1:51887663-51887682 | None:intergenic | 45.0% | |
| TTTGGAGGGTGGAAGTAGTT+GGG | + | chr5_1:51887906-51887925 | None:intergenic | 45.0% | |
| ATTTGGAGGGTGGAAGTAGT+TGG | + | chr5_1:51887907-51887926 | None:intergenic | 45.0% | |
| !! | GCAATAAGATCACCGACTTC+AGG | + | chr5_1:51887996-51888015 | None:intergenic | 45.0% |
| GAAAGCCTTGAACTCAGAGA+TGG | - | chr5_1:51888238-51888257 | Msa0736060:intron | 45.0% | |
| TCCTTCCATCTCTGAGTTCA+AGG | + | chr5_1:51888246-51888265 | None:intergenic | 45.0% | |
| GCCAACACTGCAGTATTTGT+TGG | + | chr5_1:51888960-51888979 | None:intergenic | 45.0% | |
| GCTAAGGATTCACTTGACCA+TGG | - | chr5_1:51889005-51889024 | Msa0736060:intron | 45.0% | |
| GACCATGGTTCATATGGTCT+TGG | - | chr5_1:51889020-51889039 | Msa0736060:intron | 45.0% | |
| CACCAAGACCATATGAACCA+TGG | + | chr5_1:51889025-51889044 | None:intergenic | 45.0% | |
| !! | CTACTTTTCCACCCTGTCAT+TGG | + | chr5_1:51889155-51889174 | None:intergenic | 45.0% |
| GACAGGGTGGAAAAGTAGTT+TGG | - | chr5_1:51889157-51889176 | Msa0736060:intron | 45.0% | |
| !! | TTGGCGTTTGGTTTGACTCA+TGG | + | chr5_1:51889603-51889622 | None:intergenic | 45.0% |
| !! | ATGGAAAGCTTGTTGGCGTT+TGG | + | chr5_1:51889615-51889634 | None:intergenic | 45.0% |
| GCTATTCCATTGCAACTACC+TGG | - | chr5_1:51889905-51889924 | Msa0736060:intron | 45.0% | |
| ! | AAGATACAACGTTTGAGGCC+AGG | + | chr5_1:51889926-51889945 | None:intergenic | 45.0% |
| TGAGAGACAACTTCCAGCAA+TGG | - | chr5_1:51889955-51889974 | Msa0736060:intron | 45.0% | |
| TCCAGCAATGGTCAAAAGCA+AGG | - | chr5_1:51889967-51889986 | Msa0736060:intron | 45.0% | |
| !! | ACCTTGCTTTTGACCATTGC+TGG | + | chr5_1:51889971-51889990 | None:intergenic | 45.0% |
| CTAACACAACCCTGCAAAAC+TGG | + | chr5_1:51890335-51890354 | None:intergenic | 45.0% | |
| ATAGCTGACAGGGCTGAATA+TGG | - | chr5_1:51890660-51890679 | Msa0736060:intron | 45.0% | |
| TTCCTGGGAGGAAAGATGTT+TGG | - | chr5_1:51890846-51890865 | Msa0736060:intron | 45.0% | |
| AACCAAACATCTTTCCTCCC+AGG | + | chr5_1:51890851-51890870 | None:intergenic | 45.0% | |
| !! | GCTGCTATCTCTGAGATTAC+TGG | - | chr5_1:51890948-51890967 | Msa0736060:intron | 45.0% |
| !! | CGTTCTGTTGATGGCTTTCA+AGG | - | chr5_1:51891484-51891503 | Msa0736060:intron | 45.0% |
| !! | TCTGTTGATGGCTTTCAAGG+TGG | - | chr5_1:51891487-51891506 | Msa0736060:intron | 45.0% |
| ATGTTGCTATCACTAGGGCT+AGG | - | chr5_1:51891593-51891612 | Msa0736060:intron | 45.0% | |
| GAGGAATAACTACCCGTGTA+CGG | - | chr5_1:51892145-51892164 | Msa0736060:intron | 45.0% | |
| !! | TCAATTTAATAAAAAAAAAA+GGG | + | chr5_1:51885804-51885823 | None:intergenic | 5.0% |
| !!! | TTTTTGTAAAATTTAAAAAA+TGG | + | chr5_1:51891144-51891163 | None:intergenic | 5.0% |
| ACTTCAAGCCATCACTGCCT+CGG | - | chr5_1:51882053-51882072 | Msa0736060:three_prime_UTR | 50.0% | |
| TCGAGGGGGTAAATCTCGAA+CGG | - | chr5_1:51883906-51883925 | Msa0736060:CDS | 50.0% | |
| GTTAACCGCACAGTTGTAGC+TGG | - | chr5_1:51883946-51883965 | Msa0736060:intron | 50.0% | |
| ! | CTGGGCGTGTTTTATCTTGG+AGG | - | chr5_1:51883965-51883984 | Msa0736060:intron | 50.0% |
| ! | GGCGTGTTTTATCTTGGAGG+CGG | - | chr5_1:51883968-51883987 | Msa0736060:intron | 50.0% |
| ACGTCTTAAAGAGAGCGACC+TGG | - | chr5_1:51884036-51884055 | Msa0736060:intron | 50.0% | |
| ! | TACTAGGTTGAGTCACGACC+AGG | + | chr5_1:51884057-51884076 | None:intergenic | 50.0% |
| CCTCGTGACCTTAACTCAGT+TGG | + | chr5_1:51885234-51885253 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGGTCACG+AGG | - | chr5_1:51885231-51885250 | Msa0736060:CDS | 50.0% | |
| AACTAACCCGTGCTAAGCAC+GGG | + | chr5_1:51886489-51886508 | None:intergenic | 50.0% | |
| CAACTAACCCGTGCTAAGCA+CGG | + | chr5_1:51886490-51886509 | None:intergenic | 50.0% | |
| TTGAGATTTCGCTGGAGTGC+TGG | - | chr5_1:51887401-51887420 | Msa0736060:intron | 50.0% | |
| AGAACAGGTCATTTGGAGGG+TGG | + | chr5_1:51887917-51887936 | None:intergenic | 50.0% | |
| GCCTTGAACTCAGAGATGGA+AGG | - | chr5_1:51888242-51888261 | Msa0736060:intron | 50.0% | |
| AAACTCATATGGGGTCCACC+AGG | - | chr5_1:51888858-51888877 | Msa0736060:intron | 50.0% | |
| !! | AAATACTGCAGTGTTGGCGG+TGG | - | chr5_1:51888962-51888981 | Msa0736060:intron | 50.0% |
| GTGTAGGTACCATTGTCCTG+TGG | - | chr5_1:51889328-51889347 | Msa0736060:intron | 50.0% | |
| GTACCATTGTCCTGTGGCAT+TGG | - | chr5_1:51889334-51889353 | Msa0736060:intron | 50.0% | |
| ACAAACTCCTCCAATGCCAC+AGG | + | chr5_1:51889347-51889366 | None:intergenic | 50.0% | |
| TTGAGGCCAGGTAGTTGCAA+TGG | + | chr5_1:51889914-51889933 | None:intergenic | 50.0% | |
| GGTGAAAAGGTGACACGATC+TGG | - | chr5_1:51892536-51892555 | Msa0736060:five_prime_UTR | 50.0% | |
| AAGGTGACACGATCTGGTGA+AGG | - | chr5_1:51892542-51892561 | Msa0736060:five_prime_UTR | 50.0% | |
| ATCTGGTGAAGGCCAAAGCA+TGG | - | chr5_1:51892553-51892572 | Msa0736060:five_prime_UTR | 50.0% | |
| TGGCGGAGAAGCAACAAGCT+AGG | + | chr5_1:51882014-51882033 | None:intergenic | 55.0% | |
| TCGGAGATCGTCTCCACCTT+CGG | - | chr5_1:51882072-51882091 | Msa0736060:three_prime_UTR | 55.0% | |
| ! | GTTTTATCTTGGAGGCGGCG+TGG | - | chr5_1:51883973-51883992 | Msa0736060:intron | 55.0% |
| AAGGTCCGGGGTTCAAACCT+CGG | + | chr5_1:51885188-51885207 | None:intergenic | 55.0% | |
| ! | CGCCCGTATACGGGTTTGTT+AGG | + | chr5_1:51885545-51885564 | None:intergenic | 55.0% |
| TTGGTTTCGCGCCCGTATAC+GGG | + | chr5_1:51885554-51885573 | None:intergenic | 55.0% | |
| CTTGGTTTCGCGCCCGTATA+CGG | + | chr5_1:51885555-51885574 | None:intergenic | 55.0% | |
| ! | TCGCACGGGCTAATTCGAAG+CGG | + | chr5_1:51886458-51886477 | None:intergenic | 55.0% |
| GAATTAGCCCGTGCGAAGCA+CGG | - | chr5_1:51886462-51886481 | Msa0736060:CDS | 55.0% | |
| AATTAGCCCGTGCGAAGCAC+GGG | - | chr5_1:51886463-51886482 | Msa0736060:CDS | 55.0% | |
| ! | CCTCAGAGAGCACGAGTCTT+TGG | + | chr5_1:51886685-51886704 | None:intergenic | 55.0% |
| CCAAAGACTCGTGCTCTCTG+AGG | - | chr5_1:51886682-51886701 | Msa0736060:CDS | 55.0% | |
| ACTGATGAGGTGTACGGGGT+AGG | - | chr5_1:51887960-51887979 | Msa0736060:intron | 55.0% | |
| ATATGGGGTCCACCAGGAAC+TGG | - | chr5_1:51888864-51888883 | Msa0736060:intron | 55.0% | |
| CCTCCAATGCCACAGGACAA+TGG | + | chr5_1:51889340-51889359 | None:intergenic | 55.0% | |
| ! | CCATTGTCCTGTGGCATTGG+AGG | - | chr5_1:51889337-51889356 | Msa0736060:intron | 55.0% |
| GACGATCTCCGAGGCAGTGA+TGG | + | chr5_1:51882064-51882083 | None:intergenic | 60.0% | |
| GAAGGTGGAGACGATCTCCG+AGG | + | chr5_1:51882073-51882092 | None:intergenic | 60.0% | |
| CACGCCCAGCTACAACTGTG+CGG | + | chr5_1:51883954-51883973 | None:intergenic | 60.0% | |
| TGTGGCCGAGGTTTGAACCC+CGG | - | chr5_1:51885180-51885199 | Msa0736060:CDS | 60.0% | |
| GAGGTTTGAACCCCGGACCT+TGG | - | chr5_1:51885187-51885206 | Msa0736060:CDS | 60.0% | |
| ! | CACGGGCTAATTCGAAGCGG+GGG | + | chr5_1:51886455-51886474 | None:intergenic | 60.0% |
| ! | GCACGGGCTAATTCGAAGCG+GGG | + | chr5_1:51886456-51886475 | None:intergenic | 60.0% |
| ! | CGCACGGGCTAATTCGAAGC+GGG | + | chr5_1:51886457-51886476 | None:intergenic | 60.0% |
| GCACGGGCCCGTGCTTAGCA+CGG | - | chr5_1:51886479-51886498 | Msa0736060:CDS | 70.0% | |
| CACGGGCCCGTGCTTAGCAC+GGG | - | chr5_1:51886480-51886499 | Msa0736060:CDS | 70.0% | |
| CACGGGCCCGTGCTTCGCAC+GGG | + | chr5_1:51886472-51886491 | None:intergenic | 75.0% | |
| GCACGGGCCCGTGCTTCGCA+CGG | + | chr5_1:51886473-51886492 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 51882011 | 51892576 | 51882011 | ID=Msa0736060;Name=Msa0736060 |
| chr5_1 | mRNA | 51882011 | 51892576 | 51882011 | ID=Msa0736060-mRNA-1;Parent=Msa0736060;Name=Msa0736060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=125|1|1|1|0.83|0.71|7|640|927 |
| chr5_1 | exon | 51882011 | 51882888 | 51882011 | ID=Msa0736060-mRNA-1:exon:14670;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51882973 | 51883231 | 51882973 | ID=Msa0736060-mRNA-1:exon:14669;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51883603 | 51883927 | 51883603 | ID=Msa0736060-mRNA-1:exon:14668;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51884599 | 51885888 | 51884599 | ID=Msa0736060-mRNA-1:exon:14667;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51886277 | 51886834 | 51886277 | ID=Msa0736060-mRNA-1:exon:14666;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51887538 | 51887693 | 51887538 | ID=Msa0736060-mRNA-1:exon:14665;Parent=Msa0736060-mRNA-1 |
| chr5_1 | exon | 51892494 | 51892576 | 51892494 | ID=Msa0736060-mRNA-1:exon:14664;Parent=Msa0736060-mRNA-1 |
| chr5_1 | five_prime_UTR | 51892494 | 51892576 | 51892494 | ID=Msa0736060-mRNA-1:five_prime_utr;Parent=Msa0736060-mRNA-1 |
| chr5_1 | five_prime_UTR | 51887652 | 51887693 | 51887652 | ID=Msa0736060-mRNA-1:five_prime_utr;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51887538 | 51887651 | 51887538 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51886277 | 51886834 | 51886277 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51884599 | 51885888 | 51884599 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51883603 | 51883927 | 51883603 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51882973 | 51883231 | 51882973 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | CDS | 51882651 | 51882888 | 51882651 | ID=Msa0736060-mRNA-1:cds;Parent=Msa0736060-mRNA-1 |
| chr5_1 | three_prime_UTR | 51882011 | 51882650 | 51882011 | ID=Msa0736060-mRNA-1:three_prime_utr;Parent=Msa0736060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
