Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423990 | A0A072VS04 | 73.381 | 139 | 11 | 1 | 1 | 113 | 1 | 139 | 7.95e-62 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1423990 | 0.809426 | 1.903330e-50 | -8.615850e-47 |
| Msa0022640 | Msa1423990 | 0.804565 | 2.031960e-49 | -8.615850e-47 |
| Msa0023610 | Msa1423990 | 0.831817 | 1.346184e-55 | -8.615850e-47 |
| Msa0054260 | Msa1423990 | 0.804222 | 2.395669e-49 | -8.615850e-47 |
| Msa0055690 | Msa1423990 | 0.818554 | 1.844870e-52 | -8.615850e-47 |
| Msa0055730 | Msa1423990 | 0.817516 | 3.166133e-52 | -8.615850e-47 |
| Msa0073530 | Msa1423990 | 0.819113 | 1.377196e-52 | -8.615850e-47 |
| Msa0109990 | Msa1423990 | 0.802612 | 5.165468e-49 | -8.615850e-47 |
| Msa0118400 | Msa1423990 | 0.821775 | 3.373911e-53 | -8.615850e-47 |
| Msa1348950 | Msa1423990 | 0.806324 | 8.693020e-50 | -8.615850e-47 |
| Msa1358960 | Msa1423990 | 0.807418 | 5.104599e-50 | -8.615850e-47 |
| Msa1359820 | Msa1423990 | 0.838734 | 2.411825e-57 | -8.615850e-47 |
| Msa1384320 | Msa1423990 | 0.818396 | 2.003629e-52 | -8.615850e-47 |
| Msa1389240 | Msa1423990 | 0.826625 | 2.448050e-54 | -8.615850e-47 |
| Msa1406600 | Msa1423990 | 0.801240 | 9.882898e-49 | -8.615850e-47 |
| Msa1409770 | Msa1423990 | 0.802290 | 6.019245e-49 | -8.615850e-47 |
| Msa1411070 | Msa1423990 | 0.812330 | 4.475276e-51 | -8.615850e-47 |
| Msa1419010 | Msa1423990 | 0.802623 | 5.137543e-49 | -8.615850e-47 |
| Msa1423990 | Msa1424690 | 0.805125 | 1.552670e-49 | -8.615850e-47 |
| Msa1423990 | Msa1444370 | 0.846540 | 2.036759e-59 | -8.615850e-47 |
| Msa1423990 | Msa1455490 | 0.806066 | 9.853928e-50 | -8.615850e-47 |
| Msa1423990 | Msa1463140 | 0.829101 | 6.213235e-55 | -8.615850e-47 |
| Msa0627410 | Msa1423990 | 0.802297 | 5.998423e-49 | -8.615850e-47 |
| Msa0629850 | Msa1423990 | 0.810703 | 1.010483e-50 | -8.615850e-47 |
| Msa0641900 | Msa1423990 | 0.815343 | 9.707831e-52 | -8.615850e-47 |
| Msa0657970 | Msa1423990 | 0.808999 | 2.350347e-50 | -8.615850e-47 |
| Msa0661870 | Msa1423990 | 0.819786 | 9.671727e-53 | -8.615850e-47 |
| Msa0668150 | Msa1423990 | 0.844311 | 8.178172e-59 | -8.615850e-47 |
| Msa0675510 | Msa1423990 | 0.834079 | 3.686891e-56 | -8.615850e-47 |
| Msa0682530 | Msa1423990 | 0.802061 | 6.707902e-49 | -8.615850e-47 |
| Msa0702870 | Msa1423990 | 0.800868 | 1.177430e-48 | -8.615850e-47 |
| Msa0717670 | Msa1423990 | 0.804748 | 1.861193e-49 | -8.615850e-47 |
| Msa0745110 | Msa1423990 | 0.815432 | 9.274735e-52 | -8.615850e-47 |
| Msa0754180 | Msa1423990 | 0.842957 | 1.881976e-58 | -8.615850e-47 |
| Msa0773610 | Msa1423990 | 0.846555 | 2.017869e-59 | -8.615850e-47 |
| Msa0774590 | Msa1423990 | 0.801617 | 8.274403e-49 | -8.615850e-47 |
| Msa0778120 | Msa1423990 | 0.800276 | 1.554816e-48 | -8.615850e-47 |
| Msa0784520 | Msa1423990 | 0.834561 | 2.790656e-56 | -8.615850e-47 |
| Msa0784580 | Msa1423990 | 0.833221 | 6.040880e-56 | -8.615850e-47 |
| Msa0812990 | Msa1423990 | 0.806223 | 9.131832e-50 | -8.615850e-47 |
| Msa0815320 | Msa1423990 | 0.847500 | 1.111616e-59 | -8.615850e-47 |
| Msa0818010 | Msa1423990 | 0.863436 | 2.492270e-64 | -8.615850e-47 |
| Msa0818030 | Msa1423990 | 0.848418 | 6.207689e-60 | -8.615850e-47 |
| Msa0839330 | Msa1423990 | 0.807157 | 5.797275e-50 | -8.615850e-47 |
| Msa0138290 | Msa1423990 | 0.803902 | 2.792611e-49 | -8.615850e-47 |
| Msa0148720 | Msa1423990 | 0.808562 | 2.914631e-50 | -8.615850e-47 |
| Msa0153200 | Msa1423990 | 0.843451 | 1.390429e-58 | -8.615850e-47 |
| Msa0161680 | Msa1423990 | 0.804622 | 1.977169e-49 | -8.615850e-47 |
| Msa0173990 | Msa1423990 | 0.800435 | 1.443279e-48 | -8.615850e-47 |
| Msa0211680 | Msa1423990 | 0.864247 | 1.395293e-64 | -8.615850e-47 |
| Msa0235190 | Msa1423990 | 0.823485 | 1.350721e-53 | -8.615850e-47 |
| Msa1233500 | Msa1423990 | 0.801996 | 6.916290e-49 | -8.615850e-47 |
| Msa1249490 | Msa1423990 | 0.817886 | 2.613506e-52 | -8.615850e-47 |
| Msa1256380 | Msa1423990 | 0.808595 | 2.867169e-50 | -8.615850e-47 |
| Msa1269600 | Msa1423990 | 0.808162 | 3.545879e-50 | -8.615850e-47 |
| Msa1276040 | Msa1423990 | 0.809982 | 1.445220e-50 | -8.615850e-47 |
| Msa1287560 | Msa1423990 | 0.837618 | 4.673943e-57 | -8.615850e-47 |
| Msa1288000 | Msa1423990 | 0.848757 | 5.001487e-60 | -8.615850e-47 |
| Msa1289650 | Msa1423990 | 0.805063 | 1.599753e-49 | -8.615850e-47 |
| Msa1296960 | Msa1423990 | -0.804101 | 2.538546e-49 | -8.615850e-47 |
| Msa1308580 | Msa1423990 | 0.816295 | 5.952224e-52 | -8.615850e-47 |
| Msa1308590 | Msa1423990 | 0.807196 | 5.688390e-50 | -8.615850e-47 |
| Msa1308620 | Msa1423990 | 0.808873 | 2.500730e-50 | -8.615850e-47 |
| Msa1308640 | Msa1423990 | 0.814134 | 1.798299e-51 | -8.615850e-47 |
| Msa1314170 | Msa1423990 | 0.812397 | 4.327052e-51 | -8.615850e-47 |
| Msa1324780 | Msa1423990 | 0.840516 | 8.295400e-58 | -8.615850e-47 |
| Msa0365810 | Msa1423990 | 0.807824 | 4.184668e-50 | -8.615850e-47 |
| Msa0389310 | Msa1423990 | 0.812511 | 4.086278e-51 | -8.615850e-47 |
| Msa0398380 | Msa1423990 | 0.820618 | 6.236959e-53 | -8.615850e-47 |
| Msa0414590 | Msa1423990 | 0.833207 | 6.088103e-56 | -8.615850e-47 |
| Msa0432300 | Msa1423990 | 0.800830 | 1.199033e-48 | -8.615850e-47 |
| Msa0452410 | Msa1423990 | 0.828989 | 6.614781e-55 | -8.615850e-47 |
| Msa0456200 | Msa1423990 | 0.805032 | 1.623618e-49 | -8.615850e-47 |
| Msa0458700 | Msa1423990 | 0.871107 | 8.792533e-67 | -8.615850e-47 |
| Msa0983090 | Msa1423990 | 0.815510 | 8.908822e-52 | -8.615850e-47 |
| Msa1002320 | Msa1423990 | 0.806886 | 6.615139e-50 | -8.615850e-47 |
| Msa1006250 | Msa1423990 | 0.862091 | 6.474999e-64 | -8.615850e-47 |
| Msa1006440 | Msa1423990 | 0.813751 | 2.184009e-51 | -8.615850e-47 |
| Msa1006560 | Msa1423990 | 0.812027 | 5.212166e-51 | -8.615850e-47 |
| Msa1020720 | Msa1423990 | 0.851027 | 1.159148e-60 | -8.615850e-47 |
| Msa1027240 | Msa1423990 | 0.851444 | 8.842259e-61 | -8.615850e-47 |
| Msa1027290 | Msa1423990 | 0.805251 | 1.461126e-49 | -8.615850e-47 |
| Msa1050480 | Msa1423990 | 0.813730 | 2.207122e-51 | -8.615850e-47 |
| Msa1077950 | Msa1423990 | 0.809859 | 1.536613e-50 | -8.615850e-47 |
| Msa1082500 | Msa1423990 | 0.805791 | 1.125360e-49 | -8.615850e-47 |
| Msa1085100 | Msa1423990 | 0.811472 | 6.883811e-51 | -8.615850e-47 |
| Msa1092390 | Msa1423990 | 0.802191 | 6.307886e-49 | -8.615850e-47 |
| Msa1100180 | Msa1423990 | 0.815038 | 1.134573e-51 | -8.615850e-47 |
| Msa0242270 | Msa1423990 | 0.811596 | 6.469506e-51 | -8.615850e-47 |
| Msa0273570 | Msa1423990 | 0.854830 | 9.476909e-62 | -8.615850e-47 |
| Msa0273580 | Msa1423990 | 0.805418 | 1.348131e-49 | -8.615850e-47 |
| Msa0280450 | Msa1423990 | 0.813323 | 2.713040e-51 | -8.615850e-47 |
| Msa0313920 | Msa1423990 | 0.827308 | 1.681156e-54 | -8.615850e-47 |
| Msa0322830 | Msa1423990 | 0.817722 | 2.844941e-52 | -8.615850e-47 |
| Msa0326200 | Msa1423990 | 0.806812 | 6.859960e-50 | -8.615850e-47 |
| Msa0342340 | Msa1423990 | -0.803345 | 3.643957e-49 | -8.615850e-47 |
| Msa0352000 | Msa1423990 | 0.827838 | 1.253837e-54 | -8.615850e-47 |
| Msa0352010 | Msa1423990 | 0.822351 | 2.481183e-53 | -8.615850e-47 |
| Msa0363980 | Msa1423990 | 0.803734 | 3.026860e-49 | -8.615850e-47 |
| Msa1107800 | Msa1423990 | 0.849051 | 4.143552e-60 | -8.615850e-47 |
| Msa1131820 | Msa1423990 | 0.819681 | 1.022185e-52 | -8.615850e-47 |
| Msa1136090 | Msa1423990 | 0.800205 | 1.607387e-48 | -8.615850e-47 |
| Msa1139410 | Msa1423990 | 0.833937 | 4.002102e-56 | -8.615850e-47 |
| Msa1160280 | Msa1423990 | 0.815869 | 7.412729e-52 | -8.615850e-47 |
| Msa1178650 | Msa1423990 | 0.816740 | 4.731270e-52 | -8.615850e-47 |
| Msa1178660 | Msa1423990 | 0.840609 | 7.843247e-58 | -8.615850e-47 |
| Msa1179120 | Msa1423990 | 0.802378 | 5.772314e-49 | -8.615850e-47 |
| Msa1195920 | Msa1423990 | 0.811671 | 6.230244e-51 | -8.615850e-47 |
| Msa1205010 | Msa1423990 | -0.804559 | 2.037828e-49 | -8.615850e-47 |
| Msa0506000 | Msa1423990 | 0.823503 | 1.337493e-53 | -8.615850e-47 |
| Msa0533290 | Msa1423990 | 0.836134 | 1.118016e-56 | -8.615850e-47 |
| Msa0533430 | Msa1423990 | 0.853807 | 1.871209e-61 | -8.615850e-47 |
| Msa0555730 | Msa1423990 | 0.813137 | 2.980215e-51 | -8.615850e-47 |
| Msa0580610 | Msa1423990 | 0.844535 | 7.116999e-59 | -8.615850e-47 |
| Msa0584130 | Msa1423990 | 0.855588 | 5.705575e-62 | -8.615850e-47 |
| Msa0594430 | Msa1423990 | 0.811572 | 6.547744e-51 | -8.615850e-47 |
| Msa0843640 | Msa1423990 | 0.800147 | 1.651556e-48 | -8.615850e-47 |
| Msa0853540 | Msa1423990 | 0.803503 | 3.378731e-49 | -8.615850e-47 |
| Msa0858360 | Msa1423990 | 0.866390 | 2.954049e-65 | -8.615850e-47 |
| Msa0865390 | Msa1423990 | 0.837389 | 5.351201e-57 | -8.615850e-47 |
| Msa0883370 | Msa1423990 | 0.840463 | 8.565637e-58 | -8.615850e-47 |
| Msa0884920 | Msa1423990 | 0.850252 | 1.914924e-60 | -8.615850e-47 |
| Msa0885270 | Msa1423990 | 0.806965 | 6.364876e-50 | -8.615850e-47 |
| Msa0885280 | Msa1423990 | 0.816610 | 5.060330e-52 | -8.615850e-47 |
| Msa0897880 | Msa1423990 | 0.808476 | 3.039709e-50 | -8.615850e-47 |
| Msa0898350 | Msa1423990 | 0.805030 | 1.624994e-49 | -8.615850e-47 |
| Msa0898390 | Msa1423990 | 0.820466 | 6.758125e-53 | -8.615850e-47 |
| Msa0902020 | Msa1423990 | 0.803990 | 2.677652e-49 | -8.615850e-47 |
| Msa0909120 | Msa1423990 | 0.800926 | 1.145997e-48 | -8.615850e-47 |
| Msa0912500 | Msa1423990 | 0.869290 | 3.459956e-66 | -8.615850e-47 |
| Msa0924370 | Msa1423990 | 0.802894 | 4.516869e-49 | -8.615850e-47 |
| Msa0940090 | Msa1423990 | 0.815549 | 8.732230e-52 | -8.615850e-47 |
| Msa0946320 | Msa1423990 | 0.801405 | 9.143086e-49 | -8.615850e-47 |
| Msa0957640 | Msa1423990 | 0.815090 | 1.104481e-51 | -8.615850e-47 |
| Msa0963310 | Msa1423990 | 0.816440 | 5.525519e-52 | -8.615850e-47 |
| Msa0965750 | Msa1423990 | 0.804195 | 2.427380e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423990 | MtrunA17_Chr7g0259081 | 69.784 | 139 | 16 | 1 | 1 | 113 | 1 | 139 | 6.45e-61 | 185 |
| Msa1423990 | MtrunA17_Chr7g0234721 | 70.504 | 139 | 15 | 1 | 1 | 113 | 1 | 139 | 2.22e-60 | 187 |
| Msa1423990 | MtrunA17_Chr4g0010241 | 74.528 | 106 | 22 | 1 | 8 | 113 | 58 | 158 | 6.81e-50 | 159 |
| Msa1423990 | MtrunA17_Chr1g0193821 | 87.179 | 78 | 10 | 0 | 36 | 113 | 2 | 79 | 5.25e-42 | 139 |
| Msa1423990 | MtrunA17_Chr1g0163751 | 86.567 | 67 | 9 | 0 | 48 | 114 | 1 | 67 | 9.91e-36 | 117 |
| Msa1423990 | MtrunA17_Chr2g0309041 | 48.913 | 92 | 47 | 0 | 25 | 116 | 8 | 99 | 1.36e-25 | 93.2 |
| Msa1423990 | MtrunA17_Chr6g0469931 | 35.052 | 97 | 60 | 1 | 20 | 113 | 42 | 138 | 6.10e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 24 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTGAACACCATTCCCTTT+TGG | 0.335731 | tig0025605:+26174 | None:intergenic |
| ATCTTACGACAACAACTACT+TGG | 0.436277 | tig0025605:-25991 | Msa1423990:CDS |
| GTTATCTAGGGTGATCGAAT+TGG | 0.439895 | tig0025605:-26242 | Msa1423990:intron |
| TAAAAGAATACACGTTTGTT+GGG | 0.445639 | tig0025605:+26039 | None:intergenic |
| CAAACTATCTAAAATAGCTT+TGG | 0.447623 | tig0025605:-26063 | Msa1423990:CDS |
| GTTCAAGGAGCAGCTCCAAA+AGG | 0.451155 | tig0025605:-26189 | Msa1423990:CDS |
| TCAGGTGCTGACTGGTTTGA+TGG | 0.451413 | tig0025605:-24145 | Msa1423990:intron |
| TAAGATTCATTGAAAACATC+AGG | 0.453691 | tig0025605:+26008 | None:intergenic |
| AACATTGATCTACAAGTTCA+AGG | 0.456133 | tig0025605:-26204 | Msa1423990:CDS |
| GTAAAAGAATACACGTTTGT+TGG | 0.488985 | tig0025605:+26038 | None:intergenic |
| TACGACAACAACTACTTGGT+TGG | 0.497178 | tig0025605:-25987 | Msa1423990:intron |
| TTCAGTTTGTATTTGTTGTG+TGG | 0.509726 | tig0025605:+26107 | None:intergenic |
| TTTGATGTTGCTTGCAACAG+TGG | 0.526798 | tig0025605:-26143 | Msa1423990:CDS |
| AATCCATGTCAGGTGCTGAC+TGG | 0.535775 | tig0025605:-24153 | Msa1423990:intron |
| TTCAAGGAGCAGCTCCAAAA+GGG | 0.539494 | tig0025605:-26188 | Msa1423990:CDS |
| TCATTGAAAACATCAGGTGC+AGG | 0.566053 | tig0025605:+26014 | None:intergenic |
| AATCGTGGACATTGGTTGTG+AGG | 0.571247 | tig0025605:-26426 | Msa1423990:CDS |
| AAGAAAACAATCGTGGACAT+TGG | 0.576751 | tig0025605:-26434 | Msa1423990:CDS |
| GGAGCAGCTCCAAAAGGGAA+TGG | 0.596868 | tig0025605:-26183 | Msa1423990:CDS |
| AGTTTGTATTTGTTGTGTGG+TGG | 0.624958 | tig0025605:+26110 | None:intergenic |
| AACCCCACACATCAAGGAGG+TGG | 0.635570 | tig0025605:+24073 | None:intergenic |
| ATCGTGGACATTGGTTGTGA+GGG | 0.635753 | tig0025605:-26425 | Msa1423990:CDS |
| TTTCGCCAAGAAAACAATCG+TGG | 0.675585 | tig0025605:-26441 | Msa1423990:CDS |
| TGTAACCCCACACATCAAGG+AGG | 0.759348 | tig0025605:+24070 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATTTTAATATAATTA+GGG | + | tig0025605:25696-25715 | None:intergenic | 0.0% |
| !!! | AAAAATATTTTAATATAATT+AGG | + | tig0025605:25697-25716 | None:intergenic | 0.0% |
| !!! | AAAATATTTTAATATAATTA+GGG | + | tig0025605:25696-25715 | None:intergenic | 0.0% |
| !!! | AAAAATATTTTAATATAATT+AGG | + | tig0025605:25697-25716 | None:intergenic | 0.0% |
| !! | TATATTCAATCATTAAATTA+TGG | - | tig0025605:24789-24808 | Msa1423990:intron | 10.0% |
| !!! | TAAATACAGTTTTTAATAAT+TGG | - | tig0025605:24882-24901 | Msa1423990:intron | 10.0% |
| !! | TATATTCAATCATTAAATTA+TGG | - | tig0025605:24789-24808 | Msa1423990:intron | 10.0% |
| !!! | TAAATACAGTTTTTAATAAT+TGG | - | tig0025605:24882-24901 | Msa1423990:intron | 10.0% |
| !!! | ATAATTTTCTTCCTATAAAT+TGG | - | tig0025605:24601-24620 | Msa1423990:intron | 15.0% |
| !! | TAATATTTCTTCCAATTTAT+AGG | + | tig0025605:24615-24634 | None:intergenic | 15.0% |
| !! | ACGTTATATAATTATCTTAA+CGG | - | tig0025605:24722-24741 | Msa1423990:intron | 15.0% |
| !! | AAAATAAAGGTAAAAAACAA+AGG | + | tig0025605:24920-24939 | None:intergenic | 15.0% |
| !! | CAGTAAAGTATAATAAAATT+AGG | - | tig0025605:25163-25182 | Msa1423990:intron | 15.0% |
| !!! | AGTAATAATTTTATTCATAC+TGG | - | tig0025605:25464-25483 | Msa1423990:intron | 15.0% |
| !! | ACTTAATCAATATATTAAAC+AGG | + | tig0025605:25514-25533 | None:intergenic | 15.0% |
| !!! | AAATATTCCTTTTAAGTAAA+TGG | - | tig0025605:25649-25668 | Msa1423990:intron | 15.0% |
| !!! | AATATTCCTTTTAAGTAAAT+GGG | - | tig0025605:25650-25669 | Msa1423990:intron | 15.0% |
| !!! | ATAATTTTCTTCCTATAAAT+TGG | - | tig0025605:24601-24620 | Msa1423990:intron | 15.0% |
| !! | TAATATTTCTTCCAATTTAT+AGG | + | tig0025605:24615-24634 | None:intergenic | 15.0% |
| !! | ACGTTATATAATTATCTTAA+CGG | - | tig0025605:24722-24741 | Msa1423990:intron | 15.0% |
| !! | AAAATAAAGGTAAAAAACAA+AGG | + | tig0025605:24920-24939 | None:intergenic | 15.0% |
| !! | CAGTAAAGTATAATAAAATT+AGG | - | tig0025605:25163-25182 | Msa1423990:intron | 15.0% |
| !!! | AGTAATAATTTTATTCATAC+TGG | - | tig0025605:25464-25483 | Msa1423990:intron | 15.0% |
| !! | ACTTAATCAATATATTAAAC+AGG | + | tig0025605:25514-25533 | None:intergenic | 15.0% |
| !!! | AAATATTCCTTTTAAGTAAA+TGG | - | tig0025605:25649-25668 | Msa1423990:intron | 15.0% |
| !!! | AATATTCCTTTTAAGTAAAT+GGG | - | tig0025605:25650-25669 | Msa1423990:intron | 15.0% |
| !!! | TGTTTTAATCATTGTTATCT+AGG | - | tig0025605:24301-24320 | Msa1423990:intron | 20.0% |
| !!! | GTTTTAATCATTGTTATCTA+GGG | - | tig0025605:24302-24321 | Msa1423990:intron | 20.0% |
| !!! | AAAATGTATGCATATTTTGA+TGG | - | tig0025605:24830-24849 | Msa1423990:intron | 20.0% |
| !!! | TTTTTTTTAACCTTACTCTT+AGG | - | tig0025605:24978-24997 | Msa1423990:intron | 20.0% |
| !! | ATCTCTGATTAAAAAAATGA+TGG | - | tig0025605:25213-25232 | Msa1423990:intron | 20.0% |
| !! | TCTCTGATTAAAAAAATGAT+GGG | - | tig0025605:25214-25233 | Msa1423990:intron | 20.0% |
| !! | TTATTTAATCACAATACTCT+CGG | + | tig0025605:25441-25460 | None:intergenic | 20.0% |
| !! | ATAAGAGTTCAAATTAACTT+TGG | + | tig0025605:25543-25562 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAAAAAGACCG+AGG | - | tig0025605:25722-25741 | Msa1423990:intron | 20.0% |
| !! | AAAAAAAAAAAAAAGACCGA+GGG | - | tig0025605:25723-25742 | Msa1423990:intron | 20.0% |
| !!! | ATCACATTTCTTTTACAATT+TGG | + | tig0025605:25908-25927 | None:intergenic | 20.0% |
| !!! | TGTTTTAATCATTGTTATCT+AGG | - | tig0025605:24301-24320 | Msa1423990:intron | 20.0% |
| !!! | GTTTTAATCATTGTTATCTA+GGG | - | tig0025605:24302-24321 | Msa1423990:intron | 20.0% |
| !!! | AAAATGTATGCATATTTTGA+TGG | - | tig0025605:24830-24849 | Msa1423990:intron | 20.0% |
| !!! | TTTTTTTTAACCTTACTCTT+AGG | - | tig0025605:24978-24997 | Msa1423990:intron | 20.0% |
| !! | ATCTCTGATTAAAAAAATGA+TGG | - | tig0025605:25213-25232 | Msa1423990:intron | 20.0% |
| !! | TCTCTGATTAAAAAAATGAT+GGG | - | tig0025605:25214-25233 | Msa1423990:intron | 20.0% |
| !! | TTATTTAATCACAATACTCT+CGG | + | tig0025605:25441-25460 | None:intergenic | 20.0% |
| !! | ATAAGAGTTCAAATTAACTT+TGG | + | tig0025605:25543-25562 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAAAAAGACCG+AGG | - | tig0025605:25722-25741 | Msa1423990:intron | 20.0% |
| !! | AAAAAAAAAAAAAAGACCGA+GGG | - | tig0025605:25723-25742 | Msa1423990:intron | 20.0% |
| !!! | ATCACATTTCTTTTACAATT+TGG | + | tig0025605:25908-25927 | None:intergenic | 20.0% |
| !! | ATAAAAACTACCATTTTCCA+TGG | - | tig0025605:24193-24212 | Msa1423990:intron | 25.0% |
| !! | TAAAAACTACCATTTTCCAT+GGG | - | tig0025605:24194-24213 | Msa1423990:intron | 25.0% |
| !! | CAAACTATCTAAAATAGCTT+TGG | - | tig0025605:24493-24512 | Msa1423990:intron | 25.0% |
| ! | TAAAAGAATACACGTTTGTT+GGG | + | tig0025605:24520-24539 | None:intergenic | 25.0% |
| ! | TAAGATTCATTGAAAACATC+AGG | + | tig0025605:24551-24570 | None:intergenic | 25.0% |
| ! | GATCAGAGAACTAAAAATAA+AGG | + | tig0025605:24933-24952 | None:intergenic | 25.0% |
| !!! | TTTTCTCAATTATTTCTCAC+TGG | - | tig0025605:25256-25275 | Msa1423990:intron | 25.0% |
| ! | TTCATACTGGTAGATTAAAA+CGG | - | tig0025605:25477-25496 | Msa1423990:intron | 25.0% |
| !!! | AGGAATATTTTTAAGAGAGT+GGG | + | tig0025605:25639-25658 | None:intergenic | 25.0% |
| !!! | AAGGAATATTTTTAAGAGAG+TGG | + | tig0025605:25640-25659 | None:intergenic | 25.0% |
| !!! | AAGTTGCGTTTTTTCATATA+TGG | + | tig0025605:26115-26134 | None:intergenic | 25.0% |
| !! | ATAAAAACTACCATTTTCCA+TGG | - | tig0025605:24193-24212 | Msa1423990:intron | 25.0% |
| !! | TAAAAACTACCATTTTCCAT+GGG | - | tig0025605:24194-24213 | Msa1423990:intron | 25.0% |
| !! | CAAACTATCTAAAATAGCTT+TGG | - | tig0025605:24493-24512 | Msa1423990:intron | 25.0% |
| ! | TAAAAGAATACACGTTTGTT+GGG | + | tig0025605:24520-24539 | None:intergenic | 25.0% |
| ! | TAAGATTCATTGAAAACATC+AGG | + | tig0025605:24551-24570 | None:intergenic | 25.0% |
| ! | GATCAGAGAACTAAAAATAA+AGG | + | tig0025605:24933-24952 | None:intergenic | 25.0% |
| !!! | TTTTCTCAATTATTTCTCAC+TGG | - | tig0025605:25256-25275 | Msa1423990:intron | 25.0% |
| ! | TTCATACTGGTAGATTAAAA+CGG | - | tig0025605:25477-25496 | Msa1423990:intron | 25.0% |
| !!! | AGGAATATTTTTAAGAGAGT+GGG | + | tig0025605:25639-25658 | None:intergenic | 25.0% |
| !!! | AAGGAATATTTTTAAGAGAG+TGG | + | tig0025605:25640-25659 | None:intergenic | 25.0% |
| !!! | AAGTTGCGTTTTTTCATATA+TGG | + | tig0025605:26115-26134 | None:intergenic | 25.0% |
| ! | AAAAACTACCATTTTCCATG+GGG | - | tig0025605:24195-24214 | Msa1423990:intron | 30.0% |
| AACATTGATCTACAAGTTCA+AGG | - | tig0025605:24352-24371 | Msa1423990:intron | 30.0% | |
| !! | TTCAGTTTGTATTTGTTGTG+TGG | + | tig0025605:24452-24471 | None:intergenic | 30.0% |
| GTAAAAGAATACACGTTTGT+TGG | + | tig0025605:24521-24540 | None:intergenic | 30.0% | |
| !!! | ATGTATGCATATTTTGATGG+AGG | - | tig0025605:24833-24852 | Msa1423990:intron | 30.0% |
| CAAGTTCTTCAACTCATTAA+TGG | + | tig0025605:25008-25027 | None:intergenic | 30.0% | |
| !! | AATGTGGGTTAGAAAAAAGT+AGG | + | tig0025605:25060-25079 | None:intergenic | 30.0% |
| !!! | ACTTTTTTCTAACCCACATT+TGG | - | tig0025605:25060-25079 | Msa1423990:intron | 30.0% |
| !! | TCAGTTAGAAAGTGTTTGTT+TGG | - | tig0025605:25105-25124 | Msa1423990:intron | 30.0% |
| AAGTGTTTGTTTGGAAAAAG+AGG | - | tig0025605:25114-25133 | Msa1423990:intron | 30.0% | |
| ! | CTGATTAAAAAAATGATGGG+AGG | - | tig0025605:25217-25236 | Msa1423990:intron | 30.0% |
| AGTAGTTTCTTGGTTTAACT+GGG | + | tig0025605:25767-25786 | None:intergenic | 30.0% | |
| TACAATACATGACAATCCAT+TGG | - | tig0025605:25801-25820 | Msa1423990:intron | 30.0% | |
| ACAATACATGACAATCCATT+GGG | - | tig0025605:25802-25821 | Msa1423990:intron | 30.0% | |
| GTTGTCAATAGTGAATTGTA+TGG | + | tig0025605:26064-26083 | None:intergenic | 30.0% | |
| TAATTAGAATCAGATCGTGA+AGG | - | tig0025605:26154-26173 | Msa1423990:CDS | 30.0% | |
| !!! | GCAGATCAGTTTTTTTTTCT+TGG | + | tig0025605:26325-26344 | None:intergenic | 30.0% |
| ATGGAACTGATCCTAAAAAA+GGG | - | tig0025605:26430-26449 | Msa1423990:CDS | 30.0% | |
| ! | AAAAACTACCATTTTCCATG+GGG | - | tig0025605:24195-24214 | Msa1423990:intron | 30.0% |
| AACATTGATCTACAAGTTCA+AGG | - | tig0025605:24352-24371 | Msa1423990:intron | 30.0% | |
| !! | TTCAGTTTGTATTTGTTGTG+TGG | + | tig0025605:24452-24471 | None:intergenic | 30.0% |
| GTAAAAGAATACACGTTTGT+TGG | + | tig0025605:24521-24540 | None:intergenic | 30.0% | |
| !!! | ATGTATGCATATTTTGATGG+AGG | - | tig0025605:24833-24852 | Msa1423990:intron | 30.0% |
| CAAGTTCTTCAACTCATTAA+TGG | + | tig0025605:25008-25027 | None:intergenic | 30.0% | |
| !! | AATGTGGGTTAGAAAAAAGT+AGG | + | tig0025605:25060-25079 | None:intergenic | 30.0% |
| !!! | ACTTTTTTCTAACCCACATT+TGG | - | tig0025605:25060-25079 | Msa1423990:intron | 30.0% |
| !! | TCAGTTAGAAAGTGTTTGTT+TGG | - | tig0025605:25105-25124 | Msa1423990:intron | 30.0% |
| AAGTGTTTGTTTGGAAAAAG+AGG | - | tig0025605:25114-25133 | Msa1423990:intron | 30.0% | |
| ! | CTGATTAAAAAAATGATGGG+AGG | - | tig0025605:25217-25236 | Msa1423990:intron | 30.0% |
| AGTAGTTTCTTGGTTTAACT+GGG | + | tig0025605:25767-25786 | None:intergenic | 30.0% | |
| TACAATACATGACAATCCAT+TGG | - | tig0025605:25801-25820 | Msa1423990:intron | 30.0% | |
| ACAATACATGACAATCCATT+GGG | - | tig0025605:25802-25821 | Msa1423990:intron | 30.0% | |
| GTTGTCAATAGTGAATTGTA+TGG | + | tig0025605:26064-26083 | None:intergenic | 30.0% | |
| TAATTAGAATCAGATCGTGA+AGG | - | tig0025605:26154-26173 | Msa1423990:CDS | 30.0% | |
| !!! | GCAGATCAGTTTTTTTTTCT+TGG | + | tig0025605:26325-26344 | None:intergenic | 30.0% |
| ATGGAACTGATCCTAAAAAA+GGG | - | tig0025605:26430-26449 | Msa1423990:CDS | 30.0% | |
| ! | AATGTCCACGATTGTTTTCT+TGG | + | tig0025605:24123-24142 | None:intergenic | 35.0% |
| AAGAAAACAATCGTGGACAT+TGG | - | tig0025605:24122-24141 | Msa1423990:CDS | 35.0% | |
| !! | AGTTTGTATTTGTTGTGTGG+TGG | + | tig0025605:24449-24468 | None:intergenic | 35.0% |
| ATCTTACGACAACAACTACT+TGG | - | tig0025605:24565-24584 | Msa1423990:intron | 35.0% | |
| TAATGGTGATCCTAAGAGTA+AGG | + | tig0025605:24991-25010 | None:intergenic | 35.0% | |
| AGAACTTGCATGTAATTGAG+TGG | - | tig0025605:25020-25039 | Msa1423990:intron | 35.0% | |
| GAACTTGCATGTAATTGAGT+GGG | - | tig0025605:25021-25040 | Msa1423990:intron | 35.0% | |
| ! | TTTTTCTAACCCACATTTGG+TGG | - | tig0025605:25063-25082 | Msa1423990:intron | 35.0% |
| !!! | TTGGTGGAGGTTTTAGTTTA+TGG | - | tig0025605:25079-25098 | Msa1423990:intron | 35.0% |
| !!! | TGGTGGAGGTTTTAGTTTAT+GGG | - | tig0025605:25080-25099 | Msa1423990:intron | 35.0% |
| !! | ATTGGAGAGAGTATTTCTCT+CGG | + | tig0025605:25295-25314 | None:intergenic | 35.0% |
| ATACTGGTAGATTAAAACGG+AGG | - | tig0025605:25480-25499 | Msa1423990:intron | 35.0% | |
| CTGCATCCCATTTACTTAAA+AGG | + | tig0025605:25659-25678 | None:intergenic | 35.0% | |
| GAGTAGTTTCTTGGTTTAAC+TGG | + | tig0025605:25768-25787 | None:intergenic | 35.0% | |
| CATATTGCTGAGTAGTTTCT+TGG | + | tig0025605:25777-25796 | None:intergenic | 35.0% | |
| CATTGGGCAAAGAAACAAAT+CGG | - | tig0025605:25818-25837 | Msa1423990:intron | 35.0% | |
| ATGACAACAACAAGCTTCAA+AGG | - | tig0025605:26028-26047 | Msa1423990:CDS | 35.0% | |
| GTGAATTGTATGGCTAGAAA+TGG | + | tig0025605:26054-26073 | None:intergenic | 35.0% | |
| AACACAAAACTCGATGACAA+TGG | - | tig0025605:26203-26222 | Msa1423990:CDS | 35.0% | |
| TGGATTGTTACTCTCAAATC+TGG | + | tig0025605:26389-26408 | None:intergenic | 35.0% | |
| GATGGAACTGATCCTAAAAA+AGG | - | tig0025605:26429-26448 | Msa1423990:CDS | 35.0% | |
| TGGAACTGATCCTAAAAAAG+GGG | - | tig0025605:26431-26450 | Msa1423990:CDS | 35.0% | |
| ! | AATGTCCACGATTGTTTTCT+TGG | + | tig0025605:24123-24142 | None:intergenic | 35.0% |
| AAGAAAACAATCGTGGACAT+TGG | - | tig0025605:24122-24141 | Msa1423990:CDS | 35.0% | |
| !! | AGTTTGTATTTGTTGTGTGG+TGG | + | tig0025605:24449-24468 | None:intergenic | 35.0% |
| ATCTTACGACAACAACTACT+TGG | - | tig0025605:24565-24584 | Msa1423990:intron | 35.0% | |
| TAATGGTGATCCTAAGAGTA+AGG | + | tig0025605:24991-25010 | None:intergenic | 35.0% | |
| AGAACTTGCATGTAATTGAG+TGG | - | tig0025605:25020-25039 | Msa1423990:intron | 35.0% | |
| GAACTTGCATGTAATTGAGT+GGG | - | tig0025605:25021-25040 | Msa1423990:intron | 35.0% | |
| ! | TTTTTCTAACCCACATTTGG+TGG | - | tig0025605:25063-25082 | Msa1423990:intron | 35.0% |
| !!! | TTGGTGGAGGTTTTAGTTTA+TGG | - | tig0025605:25079-25098 | Msa1423990:intron | 35.0% |
| !!! | TGGTGGAGGTTTTAGTTTAT+GGG | - | tig0025605:25080-25099 | Msa1423990:intron | 35.0% |
| !! | ATTGGAGAGAGTATTTCTCT+CGG | + | tig0025605:25295-25314 | None:intergenic | 35.0% |
| ATACTGGTAGATTAAAACGG+AGG | - | tig0025605:25480-25499 | Msa1423990:intron | 35.0% | |
| CTGCATCCCATTTACTTAAA+AGG | + | tig0025605:25659-25678 | None:intergenic | 35.0% | |
| GAGTAGTTTCTTGGTTTAAC+TGG | + | tig0025605:25768-25787 | None:intergenic | 35.0% | |
| CATATTGCTGAGTAGTTTCT+TGG | + | tig0025605:25777-25796 | None:intergenic | 35.0% | |
| CATTGGGCAAAGAAACAAAT+CGG | - | tig0025605:25818-25837 | Msa1423990:intron | 35.0% | |
| ATGACAACAACAAGCTTCAA+AGG | - | tig0025605:26028-26047 | Msa1423990:CDS | 35.0% | |
| GTGAATTGTATGGCTAGAAA+TGG | + | tig0025605:26054-26073 | None:intergenic | 35.0% | |
| AACACAAAACTCGATGACAA+TGG | - | tig0025605:26203-26222 | Msa1423990:CDS | 35.0% | |
| TGGATTGTTACTCTCAAATC+TGG | + | tig0025605:26389-26408 | None:intergenic | 35.0% | |
| GATGGAACTGATCCTAAAAA+AGG | - | tig0025605:26429-26448 | Msa1423990:CDS | 35.0% | |
| TGGAACTGATCCTAAAAAAG+GGG | - | tig0025605:26431-26450 | Msa1423990:CDS | 35.0% | |
| TTTCGCCAAGAAAACAATCG+TGG | - | tig0025605:24115-24134 | Msa1423990:CDS | 40.0% | |
| AGAATCAACCCCATGGAAAA+TGG | + | tig0025605:24206-24225 | None:intergenic | 40.0% | |
| ! | TTCCATGGGGTTGATTCTAA+TGG | - | tig0025605:24208-24227 | Msa1423990:intron | 40.0% |
| ATCCATTAGAATCAACCCCA+TGG | + | tig0025605:24213-24232 | None:intergenic | 40.0% | |
| ! | GTTATCTAGGGTGATCGAAT+TGG | - | tig0025605:24314-24333 | Msa1423990:intron | 40.0% |
| ! | TTTGATGTTGCTTGCAACAG+TGG | - | tig0025605:24413-24432 | Msa1423990:intron | 40.0% |
| TCATTGAAAACATCAGGTGC+AGG | + | tig0025605:24545-24564 | None:intergenic | 40.0% | |
| TACGACAACAACTACTTGGT+TGG | - | tig0025605:24569-24588 | Msa1423990:intron | 40.0% | |
| TTGCATGTAATTGAGTGGGT+TGG | - | tig0025605:25025-25044 | Msa1423990:intron | 40.0% | |
| CTAAAACCTCCACCAAATGT+GGG | + | tig0025605:25075-25094 | None:intergenic | 40.0% | |
| ACTAAAACCTCCACCAAATG+TGG | + | tig0025605:25076-25095 | None:intergenic | 40.0% | |
| ATGTTATGCACTATGTCCCT+CGG | + | tig0025605:25742-25761 | None:intergenic | 40.0% | |
| ! | CGATTTGTTTCTTTGCCCAA+TGG | + | tig0025605:25820-25839 | None:intergenic | 40.0% |
| TCCTTACCGCCTTCAAAATT+GGG | + | tig0025605:25954-25973 | None:intergenic | 40.0% | |
| TTCCTTACCGCCTTCAAAAT+TGG | + | tig0025605:25955-25974 | None:intergenic | 40.0% | |
| ! | GTGTGGATCTGTTTTCATGT+TGG | + | tig0025605:25985-26004 | None:intergenic | 40.0% |
| GTTGTCATGTTAGATGCAGT+GGG | + | tig0025605:26016-26035 | None:intergenic | 40.0% | |
| TGTTGTCATGTTAGATGCAG+TGG | + | tig0025605:26017-26036 | None:intergenic | 40.0% | |
| ATATATGGTCTCGCCGAAAA+TGG | + | tig0025605:26100-26119 | None:intergenic | 40.0% | |
| AGGAAAACTTCAACCACGAT+TGG | - | tig0025605:26174-26193 | Msa1423990:CDS | 40.0% | |
| AAACTTCAACCACGATTGGT+AGG | - | tig0025605:26178-26197 | Msa1423990:CDS | 40.0% | |
| TTGTGTTATCCTACCAATCG+TGG | + | tig0025605:26190-26209 | None:intergenic | 40.0% | |
| ACAAAACTCGATGACAATGG+CGG | - | tig0025605:26206-26225 | Msa1423990:CDS | 40.0% | |
| GCATTGTGGTTGTGTTTCAA+CGG | + | tig0025605:26250-26269 | None:intergenic | 40.0% | |
| ! | TGTGAATCTCCTCTGTTTTG+CGG | + | tig0025605:26288-26307 | None:intergenic | 40.0% |
| ! | GTTTCTAGATAGAGACAGTC+TGG | + | tig0025605:26367-26386 | None:intergenic | 40.0% |
| TGAGAGTAACAATCCATGTC+AGG | - | tig0025605:26393-26412 | Msa1423990:intron | 40.0% | |
| GATCCTAAAAAAGGGGTTCT+AGG | - | tig0025605:26438-26457 | Msa1423990:CDS | 40.0% | |
| TTTCGCCAAGAAAACAATCG+TGG | - | tig0025605:24115-24134 | Msa1423990:CDS | 40.0% | |
| AGAATCAACCCCATGGAAAA+TGG | + | tig0025605:24206-24225 | None:intergenic | 40.0% | |
| ! | TTCCATGGGGTTGATTCTAA+TGG | - | tig0025605:24208-24227 | Msa1423990:intron | 40.0% |
| ATCCATTAGAATCAACCCCA+TGG | + | tig0025605:24213-24232 | None:intergenic | 40.0% | |
| ! | GTTATCTAGGGTGATCGAAT+TGG | - | tig0025605:24314-24333 | Msa1423990:intron | 40.0% |
| ! | TTTGATGTTGCTTGCAACAG+TGG | - | tig0025605:24413-24432 | Msa1423990:intron | 40.0% |
| TCATTGAAAACATCAGGTGC+AGG | + | tig0025605:24545-24564 | None:intergenic | 40.0% | |
| TACGACAACAACTACTTGGT+TGG | - | tig0025605:24569-24588 | Msa1423990:intron | 40.0% | |
| TTGCATGTAATTGAGTGGGT+TGG | - | tig0025605:25025-25044 | Msa1423990:intron | 40.0% | |
| CTAAAACCTCCACCAAATGT+GGG | + | tig0025605:25075-25094 | None:intergenic | 40.0% | |
| ACTAAAACCTCCACCAAATG+TGG | + | tig0025605:25076-25095 | None:intergenic | 40.0% | |
| ATGTTATGCACTATGTCCCT+CGG | + | tig0025605:25742-25761 | None:intergenic | 40.0% | |
| ! | CGATTTGTTTCTTTGCCCAA+TGG | + | tig0025605:25820-25839 | None:intergenic | 40.0% |
| TCCTTACCGCCTTCAAAATT+GGG | + | tig0025605:25954-25973 | None:intergenic | 40.0% | |
| TTCCTTACCGCCTTCAAAAT+TGG | + | tig0025605:25955-25974 | None:intergenic | 40.0% | |
| ! | GTGTGGATCTGTTTTCATGT+TGG | + | tig0025605:25985-26004 | None:intergenic | 40.0% |
| GTTGTCATGTTAGATGCAGT+GGG | + | tig0025605:26016-26035 | None:intergenic | 40.0% | |
| TGTTGTCATGTTAGATGCAG+TGG | + | tig0025605:26017-26036 | None:intergenic | 40.0% | |
| ATATATGGTCTCGCCGAAAA+TGG | + | tig0025605:26100-26119 | None:intergenic | 40.0% | |
| AGGAAAACTTCAACCACGAT+TGG | - | tig0025605:26174-26193 | Msa1423990:CDS | 40.0% | |
| AAACTTCAACCACGATTGGT+AGG | - | tig0025605:26178-26197 | Msa1423990:CDS | 40.0% | |
| TTGTGTTATCCTACCAATCG+TGG | + | tig0025605:26190-26209 | None:intergenic | 40.0% | |
| ACAAAACTCGATGACAATGG+CGG | - | tig0025605:26206-26225 | Msa1423990:CDS | 40.0% | |
| GCATTGTGGTTGTGTTTCAA+CGG | + | tig0025605:26250-26269 | None:intergenic | 40.0% | |
| ! | TGTGAATCTCCTCTGTTTTG+CGG | + | tig0025605:26288-26307 | None:intergenic | 40.0% |
| ! | GTTTCTAGATAGAGACAGTC+TGG | + | tig0025605:26367-26386 | None:intergenic | 40.0% |
| TGAGAGTAACAATCCATGTC+AGG | - | tig0025605:26393-26412 | Msa1423990:intron | 40.0% | |
| GATCCTAAAAAAGGGGTTCT+AGG | - | tig0025605:26438-26457 | Msa1423990:CDS | 40.0% | |
| ! | AATCGTGGACATTGGTTGTG+AGG | - | tig0025605:24130-24149 | Msa1423990:CDS | 45.0% |
| ! | ATCGTGGACATTGGTTGTGA+GGG | - | tig0025605:24131-24150 | Msa1423990:CDS | 45.0% |
| TTCAAGGAGCAGCTCCAAAA+GGG | - | tig0025605:24368-24387 | Msa1423990:intron | 45.0% | |
| ! | TCGTGAACACCATTCCCTTT+TGG | + | tig0025605:24385-24404 | None:intergenic | 45.0% |
| ! | TTCTAACCCACATTTGGTGG+AGG | - | tig0025605:25066-25085 | Msa1423990:intron | 45.0% |
| ! | GTCCCGAATCCCAATTTTGA+AGG | - | tig0025605:25942-25961 | Msa1423990:intron | 45.0% |
| CGCCTTCAAAATTGGGATTC+GGG | + | tig0025605:25947-25966 | None:intergenic | 45.0% | |
| CCGCCTTCAAAATTGGGATT+CGG | + | tig0025605:25948-25967 | None:intergenic | 45.0% | |
| !! | CCGAATCCCAATTTTGAAGG+CGG | - | tig0025605:25945-25964 | Msa1423990:intron | 45.0% |
| !! | TCCCAATTTTGAAGGCGGTA+AGG | - | tig0025605:25950-25969 | Msa1423990:intron | 45.0% |
| TCATGTTAGATGCAGTGGGT+TGG | + | tig0025605:26012-26031 | None:intergenic | 45.0% | |
| TTGTGGTTGTGTTTCAACGG+CGG | + | tig0025605:26247-26266 | None:intergenic | 45.0% | |
| TAGATAGAGACAGTCTGGTG+TGG | + | tig0025605:26362-26381 | None:intergenic | 45.0% | |
| !!! | CCTCCTAGAACCCCTTTTTT+AGG | + | tig0025605:26444-26463 | None:intergenic | 45.0% |
| !! | CCTAAAAAAGGGGTTCTAGG+AGG | - | tig0025605:26441-26460 | Msa1423990:CDS | 45.0% |
| !! | AAAAAAGGGGTTCTAGGAGG+TGG | - | tig0025605:26444-26463 | Msa1423990:CDS | 45.0% |
| ! | AATCGTGGACATTGGTTGTG+AGG | - | tig0025605:24130-24149 | Msa1423990:CDS | 45.0% |
| ! | ATCGTGGACATTGGTTGTGA+GGG | - | tig0025605:24131-24150 | Msa1423990:CDS | 45.0% |
| TTCAAGGAGCAGCTCCAAAA+GGG | - | tig0025605:24368-24387 | Msa1423990:intron | 45.0% | |
| ! | TCGTGAACACCATTCCCTTT+TGG | + | tig0025605:24385-24404 | None:intergenic | 45.0% |
| ! | TTCTAACCCACATTTGGTGG+AGG | - | tig0025605:25066-25085 | Msa1423990:intron | 45.0% |
| ! | GTCCCGAATCCCAATTTTGA+AGG | - | tig0025605:25942-25961 | Msa1423990:intron | 45.0% |
| CGCCTTCAAAATTGGGATTC+GGG | + | tig0025605:25947-25966 | None:intergenic | 45.0% | |
| CCGCCTTCAAAATTGGGATT+CGG | + | tig0025605:25948-25967 | None:intergenic | 45.0% | |
| !! | CCGAATCCCAATTTTGAAGG+CGG | - | tig0025605:25945-25964 | Msa1423990:intron | 45.0% |
| !! | TCCCAATTTTGAAGGCGGTA+AGG | - | tig0025605:25950-25969 | Msa1423990:intron | 45.0% |
| TCATGTTAGATGCAGTGGGT+TGG | + | tig0025605:26012-26031 | None:intergenic | 45.0% | |
| TTGTGGTTGTGTTTCAACGG+CGG | + | tig0025605:26247-26266 | None:intergenic | 45.0% | |
| TAGATAGAGACAGTCTGGTG+TGG | + | tig0025605:26362-26381 | None:intergenic | 45.0% | |
| !!! | CCTCCTAGAACCCCTTTTTT+AGG | + | tig0025605:26444-26463 | None:intergenic | 45.0% |
| !! | CCTAAAAAAGGGGTTCTAGG+AGG | - | tig0025605:26441-26460 | Msa1423990:CDS | 45.0% |
| !! | AAAAAAGGGGTTCTAGGAGG+TGG | - | tig0025605:26444-26463 | Msa1423990:CDS | 45.0% |
| !!! | TTATTTTTTATATTTAAGAT+TGG | + | tig0025605:25313-25332 | None:intergenic | 5.0% |
| !!! | TTATTTTTTATATTTAAGAT+TGG | + | tig0025605:25313-25332 | None:intergenic | 5.0% |
| TTGTGAGGGTTGTTCGTGCT+TGG | - | tig0025605:24145-24164 | Msa1423990:intron | 50.0% | |
| GTTCAAGGAGCAGCTCCAAA+AGG | - | tig0025605:24367-24386 | Msa1423990:intron | 50.0% | |
| !! | TGTTAGATGCAGTGGGTTGG+TGG | + | tig0025605:26009-26028 | None:intergenic | 50.0% |
| ! | GACGACAACGCCTCCATTTT+CGG | - | tig0025605:26084-26103 | Msa1423990:CDS | 50.0% |
| TATGGTCTCGCCGAAAATGG+AGG | + | tig0025605:26097-26116 | None:intergenic | 50.0% | |
| ! | TCCTCTGTTTTGCGGTGGTT+GGG | + | tig0025605:26280-26299 | None:intergenic | 50.0% |
| ! | GAATCTCCTCTGTTTTGCGG+TGG | + | tig0025605:26285-26304 | None:intergenic | 50.0% |
| !! | AATCCATGTCAGGTGCTGAC+TGG | - | tig0025605:26403-26422 | Msa1423990:intron | 50.0% |
| AAACCAGTCAGCACCTGACA+TGG | + | tig0025605:26409-26428 | None:intergenic | 50.0% | |
| !! | TCAGGTGCTGACTGGTTTGA+TGG | - | tig0025605:26411-26430 | Msa1423990:intron | 50.0% |
| TTGTGAGGGTTGTTCGTGCT+TGG | - | tig0025605:24145-24164 | Msa1423990:intron | 50.0% | |
| GTTCAAGGAGCAGCTCCAAA+AGG | - | tig0025605:24367-24386 | Msa1423990:intron | 50.0% | |
| !! | TGTTAGATGCAGTGGGTTGG+TGG | + | tig0025605:26009-26028 | None:intergenic | 50.0% |
| ! | GACGACAACGCCTCCATTTT+CGG | - | tig0025605:26084-26103 | Msa1423990:CDS | 50.0% |
| TATGGTCTCGCCGAAAATGG+AGG | + | tig0025605:26097-26116 | None:intergenic | 50.0% | |
| ! | TCCTCTGTTTTGCGGTGGTT+GGG | + | tig0025605:26280-26299 | None:intergenic | 50.0% |
| ! | GAATCTCCTCTGTTTTGCGG+TGG | + | tig0025605:26285-26304 | None:intergenic | 50.0% |
| !! | AATCCATGTCAGGTGCTGAC+TGG | - | tig0025605:26403-26422 | Msa1423990:intron | 50.0% |
| AAACCAGTCAGCACCTGACA+TGG | + | tig0025605:26409-26428 | None:intergenic | 50.0% | |
| !! | TCAGGTGCTGACTGGTTTGA+TGG | - | tig0025605:26411-26430 | Msa1423990:intron | 50.0% |
| GGAGCAGCTCCAAAAGGGAA+TGG | - | tig0025605:24373-24392 | Msa1423990:intron | 55.0% | |
| AATCCAGCGAACCCGCAGTA+CGG | - | tig0025605:25874-25893 | Msa1423990:intron | 55.0% | |
| TTGGTTTCGTGCCCGTACTG+CGG | + | tig0025605:25889-25908 | None:intergenic | 55.0% | |
| GTGTTTCAACGGCGGTGGTT+GGG | + | tig0025605:26239-26258 | None:intergenic | 55.0% | |
| TGTGTTTCAACGGCGGTGGT+TGG | + | tig0025605:26240-26259 | None:intergenic | 55.0% | |
| TGGTTGTGTTTCAACGGCGG+TGG | + | tig0025605:26244-26263 | None:intergenic | 55.0% | |
| !! | GGTTGGGTTAGCGAGCATTG+TGG | + | tig0025605:26264-26283 | None:intergenic | 55.0% |
| ACCCAACCACCGCAAAACAG+AGG | - | tig0025605:26276-26295 | Msa1423990:intron | 55.0% | |
| ! | CTCCTCTGTTTTGCGGTGGT+TGG | + | tig0025605:26281-26300 | None:intergenic | 55.0% |
| GGAGCAGCTCCAAAAGGGAA+TGG | - | tig0025605:24373-24392 | Msa1423990:intron | 55.0% | |
| AATCCAGCGAACCCGCAGTA+CGG | - | tig0025605:25874-25893 | Msa1423990:intron | 55.0% | |
| TTGGTTTCGTGCCCGTACTG+CGG | + | tig0025605:25889-25908 | None:intergenic | 55.0% | |
| GTGTTTCAACGGCGGTGGTT+GGG | + | tig0025605:26239-26258 | None:intergenic | 55.0% | |
| TGTGTTTCAACGGCGGTGGT+TGG | + | tig0025605:26240-26259 | None:intergenic | 55.0% | |
| TGGTTGTGTTTCAACGGCGG+TGG | + | tig0025605:26244-26263 | None:intergenic | 55.0% | |
| !! | GGTTGGGTTAGCGAGCATTG+TGG | + | tig0025605:26264-26283 | None:intergenic | 55.0% |
| ACCCAACCACCGCAAAACAG+AGG | - | tig0025605:26276-26295 | Msa1423990:intron | 55.0% | |
| ! | CTCCTCTGTTTTGCGGTGGT+TGG | + | tig0025605:26281-26300 | None:intergenic | 55.0% |
| ATCCAGCGAACCCGCAGTAC+GGG | - | tig0025605:25875-25894 | Msa1423990:intron | 60.0% | |
| TGGTTTCGTGCCCGTACTGC+GGG | + | tig0025605:25888-25907 | None:intergenic | 60.0% | |
| ATCCAGCGAACCCGCAGTAC+GGG | - | tig0025605:25875-25894 | Msa1423990:intron | 60.0% | |
| TGGTTTCGTGCCCGTACTGC+GGG | + | tig0025605:25888-25907 | None:intergenic | 60.0% | |
| !! | TGCAGTGGGTTGGTGGCGTG+TGG | + | tig0025605:26002-26021 | None:intergenic | 65.0% |
| !! | TGCAGTGGGTTGGTGGCGTG+TGG | + | tig0025605:26002-26021 | None:intergenic | 65.0% |
| TGCCCGTACTGCGGGTTCGC+TGG | + | tig0025605:25880-25899 | None:intergenic | 70.0% | |
| TGCCCGTACTGCGGGTTCGC+TGG | + | tig0025605:25880-25899 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025605 | gene | 24084 | 26494 | 24084 | ID=Msa1423990;Name=Msa1423990 |
| tig0025605 | mRNA | 24084 | 26494 | 24084 | ID=Msa1423990-mRNA-1;Parent=Msa1423990;Name=Msa1423990-mRNA-1;_AED=0.67;_eAED=0.67;_QI=0|0|0.33|0.33|1|1|3|0|139 |
| tig0025605 | exon | 26423 | 26494 | 26423 | ID=Msa1423990-mRNA-1:exon:3564;Parent=Msa1423990-mRNA-1 |
| tig0025605 | exon | 25988 | 26255 | 25988 | ID=Msa1423990-mRNA-1:exon:3563;Parent=Msa1423990-mRNA-1 |
| tig0025605 | exon | 24084 | 24163 | 24084 | ID=Msa1423990-mRNA-1:exon:3562;Parent=Msa1423990-mRNA-1 |
| tig0025605 | CDS | 26423 | 26494 | 26423 | ID=Msa1423990-mRNA-1:cds;Parent=Msa1423990-mRNA-1 |
| tig0025605 | CDS | 25988 | 26255 | 25988 | ID=Msa1423990-mRNA-1:cds;Parent=Msa1423990-mRNA-1 |
| tig0025605 | CDS | 24084 | 24163 | 24084 | ID=Msa1423990-mRNA-1:cds;Parent=Msa1423990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
