Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297050 | XP_013457500.1 | 92.857 | 518 | 32 | 4 | 1 | 518 | 1 | 513 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297050 | sp|Q9FJX6|FH6_ARATH | 71.074 | 121 | 28 | 2 | 398 | 518 | 443 | 556 | 3.66e-42 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297050 | A0A072UQA1 | 92.857 | 518 | 32 | 4 | 1 | 518 | 1 | 513 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032470 | Msa1297050 | -0.802114 | 6.540986e-49 | -8.615850e-47 |
| Msa0060730 | Msa1297050 | 0.822356 | 2.474837e-53 | -8.615850e-47 |
| Msa0072420 | Msa1297050 | -0.802714 | 4.921887e-49 | -8.615850e-47 |
| Msa0081780 | Msa1297050 | -0.817179 | 3.771813e-52 | -8.615850e-47 |
| Msa0093950 | Msa1297050 | 0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0101500 | Msa1297050 | 0.810390 | 1.180474e-50 | -8.615850e-47 |
| Msa0611540 | Msa1297050 | 0.832176 | 1.097489e-55 | -8.615850e-47 |
| Msa0673160 | Msa1297050 | -0.811309 | 7.465699e-51 | -8.615850e-47 |
| Msa0741440 | Msa1297050 | -0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa0779130 | Msa1297050 | 0.822514 | 2.274958e-53 | -8.615850e-47 |
| Msa0168310 | Msa1297050 | -0.816714 | 4.796757e-52 | -8.615850e-47 |
| Msa0220400 | Msa1297050 | 0.808924 | 2.438411e-50 | -8.615850e-47 |
| Msa1297050 | Msa1325410 | 0.828846 | 7.163533e-55 | -8.615850e-47 |
| Msa1297050 | Msa1340460 | 0.829458 | 5.090797e-55 | -8.615850e-47 |
| Msa1297050 | Msa1341060 | -0.825842 | 3.759171e-54 | -8.615850e-47 |
| Msa1297050 | Msa1346840 | -0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa1297050 | Msa1364350 | 0.805767 | 1.138926e-49 | -8.615850e-47 |
| Msa1297050 | Msa1401990 | -0.820614 | 6.248776e-53 | -8.615850e-47 |
| Msa1297050 | Msa1407260 | 0.862020 | 6.808975e-64 | -8.615850e-47 |
| Msa1297050 | Msa1407760 | -0.800622 | 1.321807e-48 | -8.615850e-47 |
| Msa1297050 | Msa1419690 | -0.815444 | 9.215152e-52 | -8.615850e-47 |
| Msa1297050 | Msa1437730 | -0.813820 | 2.108968e-51 | -8.615850e-47 |
| Msa0417380 | Msa1297050 | 0.830695 | 2.540785e-55 | -8.615850e-47 |
| Msa1059470 | Msa1297050 | -0.818835 | 1.593265e-52 | -8.615850e-47 |
| Msa0240920 | Msa1297050 | -0.829181 | 5.943093e-55 | -8.615850e-47 |
| Msa0318680 | Msa1297050 | -0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa1153400 | Msa1297050 | 0.804153 | 2.476005e-49 | -8.615850e-47 |
| Msa1213980 | Msa1297050 | -0.800594 | 1.339495e-48 | -8.615850e-47 |
| Msa0530560 | Msa1297050 | -0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0589260 | Msa1297050 | 0.818642 | 1.762118e-52 | -8.615850e-47 |
| Msa0849040 | Msa1297050 | -0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa0919860 | Msa1297050 | -0.803843 | 2.872454e-49 | -8.615850e-47 |
| Msa0943970 | Msa1297050 | -0.818574 | 1.825729e-52 | -8.615850e-47 |
| Msa0944020 | Msa1297050 | -0.812497 | 4.115319e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297050 | MtrunA17_Chr4g0054001 | 92.857 | 518 | 32 | 4 | 1 | 518 | 1 | 513 | 0.0 | 856 |
| Msa1297050 | MtrunA17_Chr5g0401291 | 48.352 | 546 | 208 | 22 | 26 | 518 | 40 | 564 | 5.93e-105 | 335 |
| Msa1297050 | MtrunA17_Chr8g0347491 | 60.870 | 115 | 37 | 3 | 404 | 518 | 615 | 721 | 3.53e-31 | 128 |
| Msa1297050 | MtrunA17_Chr4g0045881 | 59.836 | 122 | 34 | 4 | 408 | 518 | 424 | 541 | 2.51e-30 | 125 |
| Msa1297050 | MtrunA17_Chr7g0249941 | 58.095 | 105 | 40 | 1 | 414 | 518 | 563 | 663 | 2.38e-28 | 120 |
| Msa1297050 | MtrunA17_Chr2g0319201 | 50.000 | 112 | 47 | 2 | 410 | 518 | 386 | 491 | 6.32e-24 | 106 |
| Msa1297050 | MtrunA17_Chr4g0042081 | 49.533 | 107 | 48 | 2 | 414 | 518 | 531 | 633 | 7.85e-23 | 102 |
| Msa1297050 | MtrunA17_Chr3g0118231 | 39.344 | 122 | 72 | 2 | 399 | 519 | 228 | 348 | 2.85e-20 | 94.7 |
| Msa1297050 | MtrunA17_Chr4g0023611 | 46.078 | 102 | 49 | 1 | 417 | 518 | 400 | 495 | 2.20e-18 | 89.0 |
| Msa1297050 | MtrunA17_Chr5g0414941 | 42.308 | 104 | 53 | 3 | 419 | 519 | 414 | 513 | 1.44e-16 | 83.2 |
| Msa1297050 | MtrunA17_Chr2g0323071 | 41.121 | 107 | 58 | 2 | 412 | 518 | 311 | 412 | 1.71e-16 | 82.8 |
| Msa1297050 | MtrunA17_Chr8g0364331 | 28.254 | 315 | 175 | 12 | 211 | 519 | 139 | 408 | 1.66e-15 | 79.7 |
| Msa1297050 | MtrunA17_Chr1g0192111 | 37.888 | 161 | 67 | 4 | 361 | 519 | 461 | 590 | 2.63e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297050 | AT5G67470.1 | 71.074 | 121 | 28 | 2 | 398 | 518 | 443 | 556 | 3.72e-43 | 164 |
| Msa1297050 | AT3G25500.1 | 67.647 | 102 | 31 | 1 | 417 | 518 | 595 | 694 | 3.27e-34 | 138 |
| Msa1297050 | AT3G05470.1 | 48.039 | 102 | 46 | 1 | 418 | 519 | 469 | 563 | 8.78e-20 | 93.6 |
| Msa1297050 | AT4G15200.3 | 40.171 | 117 | 61 | 3 | 408 | 521 | 319 | 429 | 8.65e-18 | 86.3 |
| Msa1297050 | AT1G24150.2 | 40.952 | 105 | 49 | 2 | 419 | 518 | 312 | 408 | 9.42e-17 | 83.6 |
| Msa1297050 | AT4G15200.4 | 39.474 | 114 | 60 | 3 | 408 | 518 | 318 | 425 | 5.02e-16 | 80.9 |
| Msa1297050 | AT4G15200.2 | 39.474 | 114 | 60 | 3 | 408 | 518 | 319 | 426 | 5.22e-16 | 80.9 |
| Msa1297050 | AT1G70140.1 | 42.000 | 100 | 52 | 2 | 419 | 518 | 305 | 398 | 6.38e-16 | 81.6 |
| Msa1297050 | AT1G59910.1 | 38.596 | 114 | 59 | 3 | 414 | 522 | 457 | 564 | 1.05e-14 | 77.8 |
Find 154 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTGCAGAGCTTTCAATTT+AGG | 0.159064 | 8_3:-56981651 | None:intergenic |
| GAAGAGAATTTCGGCCTTCT+AGG | 0.240553 | 8_3:-56981375 | None:intergenic |
| TGCAGTTGGATTTGCAATTC+TGG | 0.249890 | 8_3:-56980668 | None:intergenic |
| GATATGATGGAGACTCTATT+TGG | 0.275663 | 8_3:+56981846 | Msa1297050:CDS |
| ACAGACATCTCTTTAGGTTT+AGG | 0.293478 | 8_3:-56981891 | None:intergenic |
| CTGGTAACAGACATCTCTTT+AGG | 0.316531 | 8_3:-56981897 | None:intergenic |
| TCACCGAAATCTCGATTATC+TGG | 0.328111 | 8_3:+56981264 | Msa1297050:CDS |
| GGAAGCTTCTAGAATTCTAT+TGG | 0.330438 | 8_3:-56980845 | None:intergenic |
| CTTGTTTCAGTTTCCGATGA+AGG | 0.345738 | 8_3:-56980802 | None:intergenic |
| GGAGGTGGTGGAGGCGGTCG+AGG | 0.366407 | 8_3:-56981468 | None:intergenic |
| ATCATTACGCGTTTCATCTC+CGG | 0.369129 | 8_3:-56981294 | None:intergenic |
| CTTTGAGGCAATGCATTTGT+TGG | 0.370940 | 8_3:-56980358 | None:intergenic |
| GGAGTGTTGTCTGGTGGAGG+AGG | 0.379133 | 8_3:-56980544 | None:intergenic |
| GGAGGAGGCGGAGAGAATTC+CGG | 0.379178 | 8_3:-56980526 | None:intergenic |
| CTGACGGTGACGGCAGGTTC+TGG | 0.380075 | 8_3:-56980636 | None:intergenic |
| TTCAGCACAGTTCTCCTAGA+AGG | 0.380503 | 8_3:+56981361 | Msa1297050:CDS |
| GGTGGAGGCGGTCGAGGAGG+AGG | 0.390895 | 8_3:-56981462 | None:intergenic |
| CCACTGTTGAATTGGAGAAC+AGG | 0.392265 | 8_3:+56981934 | Msa1297050:CDS |
| GTTGATGCTGTGTGTGTAAA+GGG | 0.396050 | 8_3:-56980187 | None:intergenic |
| GAACCAGATAATCGAGATTT+CGG | 0.396893 | 8_3:-56981267 | None:intergenic |
| GGCGGAGGAGGTGGTGGAGG+CGG | 0.400623 | 8_3:-56981474 | None:intergenic |
| GAGGAGGTGGTGGTCCGGTT+GGG | 0.402114 | 8_3:-56980600 | None:intergenic |
| ATCCTATCGGTAACCGCAAC+CGG | 0.403274 | 8_3:+56980974 | Msa1297050:CDS |
| GAATGAAGATGCATCAAATT+CGG | 0.406335 | 8_3:-56981411 | None:intergenic |
| GGAGGAGTGTTGTCTGGTGG+AGG | 0.406674 | 8_3:-56980547 | None:intergenic |
| ACCGGTGGCGGAGGAGGTGG+TGG | 0.408154 | 8_3:-56981480 | None:intergenic |
| CATGGAATGGATTCTGCATC+TGG | 0.409278 | 8_3:+56981564 | Msa1297050:CDS |
| GGTGGCGGAGGAGGTGGTGG+AGG | 0.412226 | 8_3:-56981477 | None:intergenic |
| AAAGAAGGTGAAATGTTTCA+TGG | 0.417701 | 8_3:-56980398 | None:intergenic |
| TTTGTAGGTTTCGTTGCAGT+TGG | 0.418858 | 8_3:-56980682 | None:intergenic |
| ACACCAACCGTTGATAATTC+CGG | 0.420093 | 8_3:+56980486 | Msa1297050:CDS |
| CGCGCCGGTAACTGTAACTC+CGG | 0.422819 | 8_3:+56981218 | Msa1297050:CDS |
| GGAAGATGATGAAATTGAAA+TGG | 0.433467 | 8_3:+56981617 | Msa1297050:CDS |
| GGAGAGGGAGGAGTGTTGTC+TGG | 0.433548 | 8_3:-56980553 | None:intergenic |
| AACCGGACCACCACCTCCTC+TGG | 0.436359 | 8_3:+56980603 | Msa1297050:CDS |
| GGTGGTGGAGGCGGTCGAGG+AGG | 0.437714 | 8_3:-56981465 | None:intergenic |
| TTGAGTTTGTTAAAGCAGTT+AGG | 0.440363 | 8_3:-56980952 | None:intergenic |
| GGTGAAGTTCTCTTCGAATA+CGG | 0.446035 | 8_3:-56981246 | None:intergenic |
| AGAGGAGGTGGTGGTCCGGT+TGG | 0.447247 | 8_3:-56980601 | None:intergenic |
| GTGTTGTCTGGTGGAGGAGG+AGG | 0.448111 | 8_3:-56980541 | None:intergenic |
| GGTGGCGGCGAAGAGAATTT+CGG | 0.448554 | 8_3:-56981384 | None:intergenic |
| GCAATTGCAACTTTCTTAGC+AGG | 0.449938 | 8_3:-56980706 | None:intergenic |
| ACCACCGGTGGCGGAGGAGG+TGG | 0.451606 | 8_3:-56981483 | None:intergenic |
| CACCAGAGGAGGTGGTGGTC+CGG | 0.454974 | 8_3:-56980605 | None:intergenic |
| CACTGTTGAATTGGAGAACA+GGG | 0.460037 | 8_3:+56981935 | Msa1297050:CDS |
| TCCACCACCTCCTCCGCCAC+CGG | 0.463271 | 8_3:+56981479 | Msa1297050:CDS |
| TTCACTCACCGGAGTTCCGT+TGG | 0.463672 | 8_3:-56980929 | None:intergenic |
| CTTCTTCTTCCTCTGTTCCA+AGG | 0.464804 | 8_3:+56981514 | Msa1297050:CDS |
| CAGGTTAAATGAGGATATGA+TGG | 0.468516 | 8_3:+56981833 | Msa1297050:intron |
| ATATGATGGAGACTCTATTT+GGG | 0.475702 | 8_3:+56981847 | Msa1297050:CDS |
| ATCAAATTCGGAGCCGGTGG+CGG | 0.476632 | 8_3:-56981399 | None:intergenic |
| TCACTCACCGGAGTTCCGTT+GGG | 0.481318 | 8_3:-56980928 | None:intergenic |
| TTCTGGTTGTTTGCCACCAG+AGG | 0.486413 | 8_3:-56980619 | None:intergenic |
| CAAGGAATTATCAGTGGACT+CGG | 0.492472 | 8_3:+56981532 | Msa1297050:CDS |
| CCGTGACTTCGACGCGAAAC+CGG | 0.493969 | 8_3:-56981186 | None:intergenic |
| TTTGCCACCAGAGGAGGTGG+TGG | 0.494925 | 8_3:-56980610 | None:intergenic |
| AGAAAATTTGAAGAAGAAGA+AGG | 0.496385 | 8_3:-56980883 | None:intergenic |
| CTAAATTGAAAGCTCTGCAC+TGG | 0.496969 | 8_3:+56981652 | Msa1297050:CDS |
| CTAACCACCGGTGGCGGAGG+AGG | 0.497004 | 8_3:-56981486 | None:intergenic |
| GGTGACGTCTGCTCCGCCGC+CGG | 0.497255 | 8_3:+56980507 | Msa1297050:CDS |
| ATCTTCATTCAAACGACTCA+AGG | 0.497504 | 8_3:+56981424 | Msa1297050:CDS |
| AAATTTAGTTTAATTCTTTG+AGG | 0.499322 | 8_3:-56980373 | None:intergenic |
| CAGAACCTGCCGTCACCGTC+AGG | 0.501489 | 8_3:+56980637 | Msa1297050:CDS |
| GATTTAGTTAGCGGCGGCAA+TGG | 0.505426 | 8_3:-56981015 | None:intergenic |
| TTCTCATCTCTCAGTTCAGA+AGG | 0.510894 | 8_3:+56980296 | Msa1297050:five_prime_UTR |
| TTGTCTGGTGGAGGAGGAGG+CGG | 0.511872 | 8_3:-56980538 | None:intergenic |
| GAGGGAGGAGTGTTGTCTGG+TGG | 0.512080 | 8_3:-56980550 | None:intergenic |
| TCGATTATCTGGTTCCTCGC+CGG | 0.512966 | 8_3:+56981275 | Msa1297050:CDS |
| GAAATTCTCTTCGCCGCCAC+CGG | 0.513962 | 8_3:+56981386 | Msa1297050:CDS |
| ACCACCGGAGTTACAGTTAC+CGG | 0.514163 | 8_3:-56981222 | None:intergenic |
| GGCGGAGAGAATTCCGGCGG+CGG | 0.517028 | 8_3:-56980520 | None:intergenic |
| CGAGTCCACTGATAATTCCT+TGG | 0.519135 | 8_3:-56981531 | None:intergenic |
| TTGTTTGCCACCAGAGGAGG+TGG | 0.519577 | 8_3:-56980613 | None:intergenic |
| CTAAAGAGATGTCTGTTACC+AGG | 0.519907 | 8_3:+56981898 | Msa1297050:CDS |
| ACACTAACCACCGGTGGCGG+AGG | 0.521665 | 8_3:-56981489 | None:intergenic |
| ATGGTAATGCAGGTTAAATG+AGG | 0.524422 | 8_3:+56981824 | Msa1297050:intron |
| CTGTGCTGAAATTGTGTTGA+CGG | 0.524634 | 8_3:-56981348 | None:intergenic |
| AATGGAATGTCAGGAGAGGG+AGG | 0.526306 | 8_3:-56980565 | None:intergenic |
| GATGAGAAGAAGTAAGCCAT+TGG | 0.530994 | 8_3:-56980281 | None:intergenic |
| GGCGGCAATGGATGCAACTC+AGG | 0.531036 | 8_3:-56981003 | None:intergenic |
| TGGTTGTTTGCCACCAGAGG+AGG | 0.533009 | 8_3:-56980616 | None:intergenic |
| GGCCGGTTGCGGTTACCGAT+AGG | 0.534660 | 8_3:-56980976 | None:intergenic |
| GGGTGTGAAGAAAGCTTTGA+AGG | 0.535103 | 8_3:+56981596 | Msa1297050:CDS |
| GGAGCATGTTGCTTTATTGA+CGG | 0.535292 | 8_3:-56981318 | None:intergenic |
| TTCTTCTTCCTCGTCGTCTG+AGG | 0.537905 | 8_3:+56981074 | Msa1297050:CDS |
| AATGGATGCAACTCAGGACT+CGG | 0.538734 | 8_3:-56980997 | None:intergenic |
| TGTTGATGCTGTGTGTGTAA+AGG | 0.541611 | 8_3:-56980188 | None:intergenic |
| TTTGAAGAAGAAGAAGGTGG+TGG | 0.546772 | 8_3:-56980877 | None:intergenic |
| CGTTGATTCTCATTCTCCAC+CGG | 0.548316 | 8_3:+56981044 | Msa1297050:CDS |
| TTGAACCTGACGGTGACGGC+AGG | 0.548831 | 8_3:-56980642 | None:intergenic |
| TGTGGAGCCCAACGGAACTC+CGG | 0.552235 | 8_3:+56980921 | Msa1297050:CDS |
| TCTCTACATTGGAACCGTTG+TGG | 0.558651 | 8_3:+56980903 | Msa1297050:CDS |
| GATACACTAACCACCGGTGG+CGG | 0.560057 | 8_3:-56981492 | None:intergenic |
| CCGGTTTCGCGTCGAAGTCA+CGG | 0.563427 | 8_3:+56981186 | Msa1297050:CDS |
| GGCGGCGGAGCAGACGTCAC+CGG | 0.564483 | 8_3:-56980505 | None:intergenic |
| AGTTGCAATTGCAGTTTCAG+TGG | 0.565542 | 8_3:+56980717 | Msa1297050:CDS |
| CTCTTCGAATACGGAACCAC+CGG | 0.566007 | 8_3:-56981237 | None:intergenic |
| ACCACCTCCTCCGCCACCGG+TGG | 0.567206 | 8_3:+56981482 | Msa1297050:CDS |
| ACGACGAGAGATTTAGTTAG+CGG | 0.567683 | 8_3:-56981024 | None:intergenic |
| GCATAGAATAAAGCCTTCAT+CGG | 0.568759 | 8_3:+56980789 | Msa1297050:CDS |
| AAGCAGTTAGGTTCACTCAC+CGG | 0.571077 | 8_3:-56980940 | None:intergenic |
| ACGCCGTTTCTCTAGTCTCA+CGG | 0.576159 | 8_3:-56981104 | None:intergenic |
| CGGACCACCACCTCCTCTGG+TGG | 0.576969 | 8_3:+56980606 | Msa1297050:CDS |
| TCTGCATCTGGAAACAGTGC+GGG | 0.577794 | 8_3:+56981576 | Msa1297050:CDS |
| TCGGTCTATGAAGCATGGAA+TGG | 0.579326 | 8_3:+56981551 | Msa1297050:CDS |
| CAACCGTGAGACTAGAGAAA+CGG | 0.579509 | 8_3:+56981101 | Msa1297050:CDS |
| AACGGCGTTTCATTCGCCGC+GGG | 0.581574 | 8_3:+56981119 | Msa1297050:CDS |
| TAAATTGAAAGCTCTGCACT+GGG | 0.583118 | 8_3:+56981653 | Msa1297050:CDS |
| CTGATAATTCCTTGGAACAG+AGG | 0.585491 | 8_3:-56981523 | None:intergenic |
| CTGTTCTCCAATTCAACAGT+GGG | 0.585647 | 8_3:-56981933 | None:intergenic |
| TTCAGATCGTGCTACTGTGT+GGG | 0.587285 | 8_3:+56981692 | Msa1297050:CDS |
| TTTAACAAACTCAATCCTAT+CGG | 0.589527 | 8_3:+56980961 | Msa1297050:CDS |
| AGATGCATCAAATTCGGAGC+CGG | 0.590772 | 8_3:-56981405 | None:intergenic |
| TCTTCATTCAAACGACTCAA+GGG | 0.593445 | 8_3:+56981425 | Msa1297050:CDS |
| TGCATCAAATTCGGAGCCGG+TGG | 0.594042 | 8_3:-56981402 | None:intergenic |
| CTTCAGATCGTGCTACTGTG+TGG | 0.594661 | 8_3:+56981691 | Msa1297050:CDS |
| TGGACTCGGTCTATGAAGCA+TGG | 0.595376 | 8_3:+56981546 | Msa1297050:CDS |
| TTGATGCTGTGTGTGTAAAG+GGG | 0.600521 | 8_3:-56980186 | None:intergenic |
| GTTACAGTTACCGGCGCGGT+GGG | 0.603183 | 8_3:-56981213 | None:intergenic |
| GCATTTGAACCTGACGGTGA+CGG | 0.613546 | 8_3:-56980646 | None:intergenic |
| CTGTTCCAAGGAATTATCAG+TGG | 0.623879 | 8_3:+56981526 | Msa1297050:CDS |
| CTTCATCGGAAACTGAAACA+AGG | 0.624605 | 8_3:+56980803 | Msa1297050:CDS |
| AATTGTGTTGACGGCGACGG+CGG | 0.627963 | 8_3:-56981339 | None:intergenic |
| AGTTCCGTTGGGCTCCACAA+CGG | 0.632559 | 8_3:-56980917 | None:intergenic |
| TCACCGGAATTATCAACGGT+TGG | 0.635030 | 8_3:-56980489 | None:intergenic |
| TTGAAGAAGAAGAAGGTGGT+GGG | 0.636727 | 8_3:-56980876 | None:intergenic |
| AAATTTGAAGAAGAAGAAGG+TGG | 0.637682 | 8_3:-56980880 | None:intergenic |
| GCCGGTAACTGTAACTCCGG+TGG | 0.638656 | 8_3:+56981221 | Msa1297050:CDS |
| AGTTACAGTTACCGGCGCGG+TGG | 0.639027 | 8_3:-56981214 | None:intergenic |
| TGATGCTGTGTGTGTAAAGG+GGG | 0.641057 | 8_3:-56980185 | None:intergenic |
| GAAACTGAAACAAGGAAACT+CGG | 0.642455 | 8_3:+56980811 | Msa1297050:CDS |
| GAGGAAGAAGAAGACACCGC+CGG | 0.644407 | 8_3:-56981063 | None:intergenic |
| ACGAGAGATTTAGTTAGCGG+CGG | 0.646562 | 8_3:-56981021 | None:intergenic |
| TGATTCTCATTCTCCACCGG+CGG | 0.651839 | 8_3:+56981047 | Msa1297050:CDS |
| GGAACCGTTGTGGAGCCCAA+CGG | 0.653361 | 8_3:+56980913 | Msa1297050:CDS |
| GAAGAAGATACACTAACCAC+CGG | 0.654172 | 8_3:-56981498 | None:intergenic |
| TGAAGAAAGCTATTACACTC+CGG | 0.658840 | 8_3:+56981167 | Msa1297050:CDS |
| ATACAAGAAGAAAGCTACAA+CGG | 0.663363 | 8_3:-56980764 | None:intergenic |
| TGAAATTGTGTTGACGGCGA+CGG | 0.665769 | 8_3:-56981342 | None:intergenic |
| TACGCGTTTCATCTCCGGCG+AGG | 0.667773 | 8_3:-56981289 | None:intergenic |
| GAAGAAGAAGACACCGCCGG+TGG | 0.669517 | 8_3:-56981060 | None:intergenic |
| CCTGTTCTCCAATTCAACAG+TGG | 0.670983 | 8_3:-56981934 | None:intergenic |
| GACGTCACCGGAATTATCAA+CGG | 0.672938 | 8_3:-56980493 | None:intergenic |
| AAACGGCGTTTCATTCGCCG+CGG | 0.674228 | 8_3:+56981118 | Msa1297050:CDS |
| AGAAGGTGGTGGGACCCGCG+TGG | 0.685618 | 8_3:-56980866 | None:intergenic |
| GTTGTCTTCCTCAGACGACG+AGG | 0.698929 | 8_3:-56981082 | None:intergenic |
| AATTCTAGAAGCTTCCACGC+GGG | 0.701243 | 8_3:+56980852 | Msa1297050:CDS |
| TTCTGCATCTGGAAACAGTG+CGG | 0.703668 | 8_3:+56981575 | Msa1297050:CDS |
| GGAGGCGGAGAGAATTCCGG+CGG | 0.707007 | 8_3:-56980523 | None:intergenic |
| TTGAGTGAAGACGATTCCCG+CGG | 0.708032 | 8_3:-56981135 | None:intergenic |
| GAAGATACACTAACCACCGG+TGG | 0.712386 | 8_3:-56981495 | None:intergenic |
| GAATTCTAGAAGCTTCCACG+CGG | 0.730110 | 8_3:+56980851 | Msa1297050:CDS |
| ATTCTGGCATTTGAACCTGA+CGG | 0.734248 | 8_3:-56980652 | None:intergenic |
| CGGAGTTACAGTTACCGGCG+CGG | 0.743737 | 8_3:-56981217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATGATAAAAAAGA+AGG | - | chr8_3:56980416-56980435 | None:intergenic | 10.0% |
| !! | TAATAATATGATAAAAAAGA+AGG | - | chr8_3:56980416-56980435 | None:intergenic | 10.0% |
| !!! | TGTTTTTCTGATTTATTTAT+TGG | - | chr8_3:56980250-56980269 | None:intergenic | 15.0% |
| !!! | AAATTTAGTTTAATTCTTTG+AGG | - | chr8_3:56980376-56980395 | None:intergenic | 15.0% |
| !!! | AAAATATAGCTATTTTACTT+AGG | + | chr8_3:56981979-56981998 | Msa1297050:CDS | 15.0% |
| !!! | AAATATAGCTATTTTACTTA+GGG | + | chr8_3:56981980-56981999 | Msa1297050:CDS | 15.0% |
| !!! | TGTTTTTCTGATTTATTTAT+TGG | - | chr8_3:56980250-56980269 | None:intergenic | 15.0% |
| !!! | AAATTTAGTTTAATTCTTTG+AGG | - | chr8_3:56980376-56980395 | None:intergenic | 15.0% |
| !!! | AAAATATAGCTATTTTACTT+AGG | + | chr8_3:56981979-56981998 | Msa1297050:CDS | 15.0% |
| !!! | AAATATAGCTATTTTACTTA+GGG | + | chr8_3:56981980-56981999 | Msa1297050:CDS | 15.0% |
| !! | AAACAAAAAAGATAAACCAA+TGG | + | chr8_3:56980265-56980284 | Msa1297050:five_prime_UTR | 20.0% |
| !! | ATAGTTTAATACTTTGATTC+TGG | + | chr8_3:56981756-56981775 | Msa1297050:intron | 20.0% |
| !!! | GTTAATTATTGTGTTGTTTA+TGG | + | chr8_3:56981805-56981824 | Msa1297050:intron | 20.0% |
| !! | AAACAAAAAAGATAAACCAA+TGG | + | chr8_3:56980265-56980284 | Msa1297050:five_prime_UTR | 20.0% |
| !! | ATAGTTTAATACTTTGATTC+TGG | + | chr8_3:56981756-56981775 | Msa1297050:intron | 20.0% |
| !!! | GTTAATTATTGTGTTGTTTA+TGG | + | chr8_3:56981805-56981824 | Msa1297050:intron | 20.0% |
| ! | AGAAAATTTGAAGAAGAAGA+AGG | - | chr8_3:56980886-56980905 | None:intergenic | 25.0% |
| !! | TCTTCAAATTTTCTCTACAT+TGG | + | chr8_3:56980892-56980911 | Msa1297050:CDS | 25.0% |
| ! | TTTAACAAACTCAATCCTAT+CGG | + | chr8_3:56980961-56980980 | Msa1297050:CDS | 25.0% |
| !!! | GAAATGAGCTTGATTTTAAT+TGG | - | chr8_3:56981719-56981738 | None:intergenic | 25.0% |
| !! | TTAATACTTTGATTCTGGTT+TGG | + | chr8_3:56981761-56981780 | Msa1297050:intron | 25.0% |
| !!! | TAATACTTTGATTCTGGTTT+GGG | + | chr8_3:56981762-56981781 | Msa1297050:intron | 25.0% |
| ! | AGAAAATTTGAAGAAGAAGA+AGG | - | chr8_3:56980886-56980905 | None:intergenic | 25.0% |
| !! | TCTTCAAATTTTCTCTACAT+TGG | + | chr8_3:56980892-56980911 | Msa1297050:CDS | 25.0% |
| ! | TTTAACAAACTCAATCCTAT+CGG | + | chr8_3:56980961-56980980 | Msa1297050:CDS | 25.0% |
| !!! | GAAATGAGCTTGATTTTAAT+TGG | - | chr8_3:56981719-56981738 | None:intergenic | 25.0% |
| !! | TTAATACTTTGATTCTGGTT+TGG | + | chr8_3:56981761-56981780 | Msa1297050:intron | 25.0% |
| !!! | TAATACTTTGATTCTGGTTT+GGG | + | chr8_3:56981762-56981781 | Msa1297050:intron | 25.0% |
| AAAGAAGGTGAAATGTTTCA+TGG | - | chr8_3:56980401-56980420 | None:intergenic | 30.0% | |
| TCATTGAAAAATGGAATGTC+AGG | - | chr8_3:56980577-56980596 | None:intergenic | 30.0% | |
| ATACAAGAAGAAAGCTACAA+CGG | - | chr8_3:56980767-56980786 | None:intergenic | 30.0% | |
| AAATTTGAAGAAGAAGAAGG+TGG | - | chr8_3:56980883-56980902 | None:intergenic | 30.0% | |
| !! | TTGAGTTTGTTAAAGCAGTT+AGG | - | chr8_3:56980955-56980974 | None:intergenic | 30.0% |
| GAATGAAGATGCATCAAATT+CGG | - | chr8_3:56981414-56981433 | None:intergenic | 30.0% | |
| GGAAGATGATGAAATTGAAA+TGG | + | chr8_3:56981617-56981636 | Msa1297050:CDS | 30.0% | |
| ! | ATATGATGGAGACTCTATTT+GGG | + | chr8_3:56981847-56981866 | Msa1297050:CDS | 30.0% |
| ! | CTATATTTTGTGACTTCTTG+GGG | - | chr8_3:56981968-56981987 | None:intergenic | 30.0% |
| ! | GCTATATTTTGTGACTTCTT+GGG | - | chr8_3:56981969-56981988 | None:intergenic | 30.0% |
| ! | AGCTATATTTTGTGACTTCT+TGG | - | chr8_3:56981970-56981989 | None:intergenic | 30.0% |
| AAAGAAGGTGAAATGTTTCA+TGG | - | chr8_3:56980401-56980420 | None:intergenic | 30.0% | |
| TCATTGAAAAATGGAATGTC+AGG | - | chr8_3:56980577-56980596 | None:intergenic | 30.0% | |
| ATACAAGAAGAAAGCTACAA+CGG | - | chr8_3:56980767-56980786 | None:intergenic | 30.0% | |
| AAATTTGAAGAAGAAGAAGG+TGG | - | chr8_3:56980883-56980902 | None:intergenic | 30.0% | |
| !! | TTGAGTTTGTTAAAGCAGTT+AGG | - | chr8_3:56980955-56980974 | None:intergenic | 30.0% |
| GAATGAAGATGCATCAAATT+CGG | - | chr8_3:56981414-56981433 | None:intergenic | 30.0% | |
| GGAAGATGATGAAATTGAAA+TGG | + | chr8_3:56981617-56981636 | Msa1297050:CDS | 30.0% | |
| ! | ATATGATGGAGACTCTATTT+GGG | + | chr8_3:56981847-56981866 | Msa1297050:CDS | 30.0% |
| ! | CTATATTTTGTGACTTCTTG+GGG | - | chr8_3:56981968-56981987 | None:intergenic | 30.0% |
| ! | GCTATATTTTGTGACTTCTT+GGG | - | chr8_3:56981969-56981988 | None:intergenic | 30.0% |
| ! | AGCTATATTTTGTGACTTCT+TGG | - | chr8_3:56981970-56981989 | None:intergenic | 30.0% |
| !!! | GAAGTTTCCTCCTTCTTTTT+TGG | + | chr8_3:56980318-56980337 | Msa1297050:five_prime_UTR | 35.0% |
| AAAAATGGAATGTCAGGAGA+GGG | - | chr8_3:56980571-56980590 | None:intergenic | 35.0% | |
| GTTGGGAGTTCATTGAAAAA+TGG | - | chr8_3:56980586-56980605 | None:intergenic | 35.0% | |
| !! | TTTTTCAATGAACTCCCAAC+CGG | + | chr8_3:56980586-56980605 | Msa1297050:CDS | 35.0% |
| !! | ACTTTCTTAGCAGGTTTTGT+AGG | - | chr8_3:56980700-56980719 | None:intergenic | 35.0% |
| GCATAGAATAAAGCCTTCAT+CGG | + | chr8_3:56980789-56980808 | Msa1297050:CDS | 35.0% | |
| GAAACTGAAACAAGGAAACT+CGG | + | chr8_3:56980811-56980830 | Msa1297050:CDS | 35.0% | |
| !! | GGAAGCTTCTAGAATTCTAT+TGG | - | chr8_3:56980848-56980867 | None:intergenic | 35.0% |
| TGAAGAAAGCTATTACACTC+CGG | + | chr8_3:56981167-56981186 | Msa1297050:CDS | 35.0% | |
| GAACCAGATAATCGAGATTT+CGG | - | chr8_3:56981270-56981289 | None:intergenic | 35.0% | |
| ATCTTCATTCAAACGACTCA+AGG | + | chr8_3:56981424-56981443 | Msa1297050:CDS | 35.0% | |
| TCTTCATTCAAACGACTCAA+GGG | + | chr8_3:56981425-56981444 | Msa1297050:CDS | 35.0% | |
| TAAATTGAAAGCTCTGCACT+GGG | + | chr8_3:56981653-56981672 | Msa1297050:CDS | 35.0% | |
| !! | TGTGTTGTTTATGGTAATGC+AGG | + | chr8_3:56981814-56981833 | Msa1297050:intron | 35.0% |
| ! | ATGGTAATGCAGGTTAAATG+AGG | + | chr8_3:56981824-56981843 | Msa1297050:intron | 35.0% |
| CAGGTTAAATGAGGATATGA+TGG | + | chr8_3:56981833-56981852 | Msa1297050:intron | 35.0% | |
| ! | GATATGATGGAGACTCTATT+TGG | + | chr8_3:56981846-56981865 | Msa1297050:CDS | 35.0% |
| ! | ACAGACATCTCTTTAGGTTT+AGG | - | chr8_3:56981894-56981913 | None:intergenic | 35.0% |
| AATTCAACAGTGGGAAAAAC+TGG | - | chr8_3:56981927-56981946 | None:intergenic | 35.0% | |
| ! | AGTTTTTCCCACTGTTGAAT+TGG | + | chr8_3:56981926-56981945 | Msa1297050:CDS | 35.0% |
| !!! | GAAGTTTCCTCCTTCTTTTT+TGG | + | chr8_3:56980318-56980337 | Msa1297050:five_prime_UTR | 35.0% |
| AAAAATGGAATGTCAGGAGA+GGG | - | chr8_3:56980571-56980590 | None:intergenic | 35.0% | |
| GTTGGGAGTTCATTGAAAAA+TGG | - | chr8_3:56980586-56980605 | None:intergenic | 35.0% | |
| !! | TTTTTCAATGAACTCCCAAC+CGG | + | chr8_3:56980586-56980605 | Msa1297050:CDS | 35.0% |
| !! | ACTTTCTTAGCAGGTTTTGT+AGG | - | chr8_3:56980700-56980719 | None:intergenic | 35.0% |
| GCATAGAATAAAGCCTTCAT+CGG | + | chr8_3:56980789-56980808 | Msa1297050:CDS | 35.0% | |
| GAAACTGAAACAAGGAAACT+CGG | + | chr8_3:56980811-56980830 | Msa1297050:CDS | 35.0% | |
| !! | GGAAGCTTCTAGAATTCTAT+TGG | - | chr8_3:56980848-56980867 | None:intergenic | 35.0% |
| TGAAGAAAGCTATTACACTC+CGG | + | chr8_3:56981167-56981186 | Msa1297050:CDS | 35.0% | |
| GAACCAGATAATCGAGATTT+CGG | - | chr8_3:56981270-56981289 | None:intergenic | 35.0% | |
| ATCTTCATTCAAACGACTCA+AGG | + | chr8_3:56981424-56981443 | Msa1297050:CDS | 35.0% | |
| TCTTCATTCAAACGACTCAA+GGG | + | chr8_3:56981425-56981444 | Msa1297050:CDS | 35.0% | |
| TAAATTGAAAGCTCTGCACT+GGG | + | chr8_3:56981653-56981672 | Msa1297050:CDS | 35.0% | |
| !! | TGTGTTGTTTATGGTAATGC+AGG | + | chr8_3:56981814-56981833 | Msa1297050:intron | 35.0% |
| ! | ATGGTAATGCAGGTTAAATG+AGG | + | chr8_3:56981824-56981843 | Msa1297050:intron | 35.0% |
| CAGGTTAAATGAGGATATGA+TGG | + | chr8_3:56981833-56981852 | Msa1297050:intron | 35.0% | |
| ! | GATATGATGGAGACTCTATT+TGG | + | chr8_3:56981846-56981865 | Msa1297050:CDS | 35.0% |
| ! | ACAGACATCTCTTTAGGTTT+AGG | - | chr8_3:56981894-56981913 | None:intergenic | 35.0% |
| AATTCAACAGTGGGAAAAAC+TGG | - | chr8_3:56981927-56981946 | None:intergenic | 35.0% | |
| ! | AGTTTTTCCCACTGTTGAAT+TGG | + | chr8_3:56981926-56981945 | Msa1297050:CDS | 35.0% |
| TTGATGCTGTGTGTGTAAAG+GGG | - | chr8_3:56980189-56980208 | None:intergenic | 40.0% | |
| GTTGATGCTGTGTGTGTAAA+GGG | - | chr8_3:56980190-56980209 | None:intergenic | 40.0% | |
| TGTTGATGCTGTGTGTGTAA+AGG | - | chr8_3:56980191-56980210 | None:intergenic | 40.0% | |
| GATGAGAAGAAGTAAGCCAT+TGG | - | chr8_3:56980284-56980303 | None:intergenic | 40.0% | |
| TTCTCATCTCTCAGTTCAGA+AGG | + | chr8_3:56980296-56980315 | Msa1297050:five_prime_UTR | 40.0% | |
| GTACCAGAGTCCAAAAAAGA+AGG | - | chr8_3:56980331-56980350 | None:intergenic | 40.0% | |
| !! | CTTTGAGGCAATGCATTTGT+TGG | - | chr8_3:56980361-56980380 | None:intergenic | 40.0% |
| !! | ACACCAACCGTTGATAATTC+CGG | + | chr8_3:56980486-56980505 | Msa1297050:CDS | 40.0% |
| GAAAAATGGAATGTCAGGAG+AGG | - | chr8_3:56980572-56980591 | None:intergenic | 40.0% | |
| ATTCTGGCATTTGAACCTGA+CGG | - | chr8_3:56980655-56980674 | None:intergenic | 40.0% | |
| TGCAGTTGGATTTGCAATTC+TGG | - | chr8_3:56980671-56980690 | None:intergenic | 40.0% | |
| TTTGTAGGTTTCGTTGCAGT+TGG | - | chr8_3:56980685-56980704 | None:intergenic | 40.0% | |
| GCAATTGCAACTTTCTTAGC+AGG | - | chr8_3:56980709-56980728 | None:intergenic | 40.0% | |
| AGTTGCAATTGCAGTTTCAG+TGG | + | chr8_3:56980717-56980736 | Msa1297050:CDS | 40.0% | |
| CTTGTTTCAGTTTCCGATGA+AGG | - | chr8_3:56980805-56980824 | None:intergenic | 40.0% | |
| CTTCATCGGAAACTGAAACA+AGG | + | chr8_3:56980803-56980822 | Msa1297050:CDS | 40.0% | |
| TTGAAGAAGAAGAAGGTGGT+GGG | - | chr8_3:56980879-56980898 | None:intergenic | 40.0% | |
| TTTGAAGAAGAAGAAGGTGG+TGG | - | chr8_3:56980880-56980899 | None:intergenic | 40.0% | |
| ACGACGAGAGATTTAGTTAG+CGG | - | chr8_3:56981027-56981046 | None:intergenic | 40.0% | |
| GGTGAAGTTCTCTTCGAATA+CGG | - | chr8_3:56981249-56981268 | None:intergenic | 40.0% | |
| TCACCGAAATCTCGATTATC+TGG | + | chr8_3:56981264-56981283 | Msa1297050:CDS | 40.0% | |
| ATCATTACGCGTTTCATCTC+CGG | - | chr8_3:56981297-56981316 | None:intergenic | 40.0% | |
| !! | GGAGCATGTTGCTTTATTGA+CGG | - | chr8_3:56981321-56981340 | None:intergenic | 40.0% |
| CTGTGCTGAAATTGTGTTGA+CGG | - | chr8_3:56981351-56981370 | None:intergenic | 40.0% | |
| GAAGAAGATACACTAACCAC+CGG | - | chr8_3:56981501-56981520 | None:intergenic | 40.0% | |
| CTGATAATTCCTTGGAACAG+AGG | - | chr8_3:56981526-56981545 | None:intergenic | 40.0% | |
| CTGTTCCAAGGAATTATCAG+TGG | + | chr8_3:56981526-56981545 | Msa1297050:CDS | 40.0% | |
| ! | CAAGGAATTATCAGTGGACT+CGG | + | chr8_3:56981532-56981551 | Msa1297050:CDS | 40.0% |
| CAGTGCAGAGCTTTCAATTT+AGG | - | chr8_3:56981654-56981673 | None:intergenic | 40.0% | |
| CTAAATTGAAAGCTCTGCAC+TGG | + | chr8_3:56981652-56981671 | Msa1297050:CDS | 40.0% | |
| CTGGTAACAGACATCTCTTT+AGG | - | chr8_3:56981900-56981919 | None:intergenic | 40.0% | |
| CTAAAGAGATGTCTGTTACC+AGG | + | chr8_3:56981898-56981917 | Msa1297050:CDS | 40.0% | |
| CTGTTCTCCAATTCAACAGT+GGG | - | chr8_3:56981936-56981955 | None:intergenic | 40.0% | |
| CACTGTTGAATTGGAGAACA+GGG | + | chr8_3:56981935-56981954 | Msa1297050:CDS | 40.0% | |
| !! | GTGTCTGAAGCTCTTTTAGA+TGG | + | chr8_3:56982026-56982045 | Msa1297050:CDS | 40.0% |
| TTGATGCTGTGTGTGTAAAG+GGG | - | chr8_3:56980189-56980208 | None:intergenic | 40.0% | |
| GTTGATGCTGTGTGTGTAAA+GGG | - | chr8_3:56980190-56980209 | None:intergenic | 40.0% | |
| TGTTGATGCTGTGTGTGTAA+AGG | - | chr8_3:56980191-56980210 | None:intergenic | 40.0% | |
| GATGAGAAGAAGTAAGCCAT+TGG | - | chr8_3:56980284-56980303 | None:intergenic | 40.0% | |
| TTCTCATCTCTCAGTTCAGA+AGG | + | chr8_3:56980296-56980315 | Msa1297050:five_prime_UTR | 40.0% | |
| GTACCAGAGTCCAAAAAAGA+AGG | - | chr8_3:56980331-56980350 | None:intergenic | 40.0% | |
| !! | CTTTGAGGCAATGCATTTGT+TGG | - | chr8_3:56980361-56980380 | None:intergenic | 40.0% |
| !! | ACACCAACCGTTGATAATTC+CGG | + | chr8_3:56980486-56980505 | Msa1297050:CDS | 40.0% |
| GAAAAATGGAATGTCAGGAG+AGG | - | chr8_3:56980572-56980591 | None:intergenic | 40.0% | |
| ATTCTGGCATTTGAACCTGA+CGG | - | chr8_3:56980655-56980674 | None:intergenic | 40.0% | |
| TGCAGTTGGATTTGCAATTC+TGG | - | chr8_3:56980671-56980690 | None:intergenic | 40.0% | |
| TTTGTAGGTTTCGTTGCAGT+TGG | - | chr8_3:56980685-56980704 | None:intergenic | 40.0% | |
| GCAATTGCAACTTTCTTAGC+AGG | - | chr8_3:56980709-56980728 | None:intergenic | 40.0% | |
| AGTTGCAATTGCAGTTTCAG+TGG | + | chr8_3:56980717-56980736 | Msa1297050:CDS | 40.0% | |
| CTTGTTTCAGTTTCCGATGA+AGG | - | chr8_3:56980805-56980824 | None:intergenic | 40.0% | |
| CTTCATCGGAAACTGAAACA+AGG | + | chr8_3:56980803-56980822 | Msa1297050:CDS | 40.0% | |
| TTGAAGAAGAAGAAGGTGGT+GGG | - | chr8_3:56980879-56980898 | None:intergenic | 40.0% | |
| TTTGAAGAAGAAGAAGGTGG+TGG | - | chr8_3:56980880-56980899 | None:intergenic | 40.0% | |
| ACGACGAGAGATTTAGTTAG+CGG | - | chr8_3:56981027-56981046 | None:intergenic | 40.0% | |
| GGTGAAGTTCTCTTCGAATA+CGG | - | chr8_3:56981249-56981268 | None:intergenic | 40.0% | |
| TCACCGAAATCTCGATTATC+TGG | + | chr8_3:56981264-56981283 | Msa1297050:CDS | 40.0% | |
| ATCATTACGCGTTTCATCTC+CGG | - | chr8_3:56981297-56981316 | None:intergenic | 40.0% | |
| !! | GGAGCATGTTGCTTTATTGA+CGG | - | chr8_3:56981321-56981340 | None:intergenic | 40.0% |
| CTGTGCTGAAATTGTGTTGA+CGG | - | chr8_3:56981351-56981370 | None:intergenic | 40.0% | |
| GAAGAAGATACACTAACCAC+CGG | - | chr8_3:56981501-56981520 | None:intergenic | 40.0% | |
| CTGATAATTCCTTGGAACAG+AGG | - | chr8_3:56981526-56981545 | None:intergenic | 40.0% | |
| CTGTTCCAAGGAATTATCAG+TGG | + | chr8_3:56981526-56981545 | Msa1297050:CDS | 40.0% | |
| ! | CAAGGAATTATCAGTGGACT+CGG | + | chr8_3:56981532-56981551 | Msa1297050:CDS | 40.0% |
| CAGTGCAGAGCTTTCAATTT+AGG | - | chr8_3:56981654-56981673 | None:intergenic | 40.0% | |
| CTAAATTGAAAGCTCTGCAC+TGG | + | chr8_3:56981652-56981671 | Msa1297050:CDS | 40.0% | |
| CTGGTAACAGACATCTCTTT+AGG | - | chr8_3:56981900-56981919 | None:intergenic | 40.0% | |
| CTAAAGAGATGTCTGTTACC+AGG | + | chr8_3:56981898-56981917 | Msa1297050:CDS | 40.0% | |
| CTGTTCTCCAATTCAACAGT+GGG | - | chr8_3:56981936-56981955 | None:intergenic | 40.0% | |
| CACTGTTGAATTGGAGAACA+GGG | + | chr8_3:56981935-56981954 | Msa1297050:CDS | 40.0% | |
| !! | GTGTCTGAAGCTCTTTTAGA+TGG | + | chr8_3:56982026-56982045 | Msa1297050:CDS | 40.0% |
| TGATGCTGTGTGTGTAAAGG+GGG | - | chr8_3:56980188-56980207 | None:intergenic | 45.0% | |
| CCAGAGTCCAAAAAAGAAGG+AGG | - | chr8_3:56980328-56980347 | None:intergenic | 45.0% | |
| !!! | CCTCCTTCTTTTTTGGACTC+TGG | + | chr8_3:56980325-56980344 | Msa1297050:five_prime_UTR | 45.0% |
| TCACCGGAATTATCAACGGT+TGG | - | chr8_3:56980492-56980511 | None:intergenic | 45.0% | |
| GACGTCACCGGAATTATCAA+CGG | - | chr8_3:56980496-56980515 | None:intergenic | 45.0% | |
| ! | GAATTCTAGAAGCTTCCACG+CGG | + | chr8_3:56980851-56980870 | Msa1297050:CDS | 45.0% |
| ! | AATTCTAGAAGCTTCCACGC+GGG | + | chr8_3:56980852-56980871 | Msa1297050:CDS | 45.0% |
| TCTCTACATTGGAACCGTTG+TGG | + | chr8_3:56980903-56980922 | Msa1297050:CDS | 45.0% | |
| AAGCAGTTAGGTTCACTCAC+CGG | - | chr8_3:56980943-56980962 | None:intergenic | 45.0% | |
| AATGGATGCAACTCAGGACT+CGG | - | chr8_3:56981000-56981019 | None:intergenic | 45.0% | |
| ACGAGAGATTTAGTTAGCGG+CGG | - | chr8_3:56981024-56981043 | None:intergenic | 45.0% | |
| !! | CGTTGATTCTCATTCTCCAC+CGG | + | chr8_3:56981044-56981063 | Msa1297050:CDS | 45.0% |
| CAACCGTGAGACTAGAGAAA+CGG | + | chr8_3:56981101-56981120 | Msa1297050:CDS | 45.0% | |
| ! | TGAAATTGTGTTGACGGCGA+CGG | - | chr8_3:56981345-56981364 | None:intergenic | 45.0% |
| TTCAGCACAGTTCTCCTAGA+AGG | + | chr8_3:56981361-56981380 | Msa1297050:CDS | 45.0% | |
| GAAGAGAATTTCGGCCTTCT+AGG | - | chr8_3:56981378-56981397 | None:intergenic | 45.0% | |
| AGATGCATCAAATTCGGAGC+CGG | - | chr8_3:56981408-56981427 | None:intergenic | 45.0% | |
| CTTCTTCTTCCTCTGTTCCA+AGG | + | chr8_3:56981514-56981533 | Msa1297050:CDS | 45.0% | |
| CGAGTCCACTGATAATTCCT+TGG | - | chr8_3:56981534-56981553 | None:intergenic | 45.0% | |
| TCGGTCTATGAAGCATGGAA+TGG | + | chr8_3:56981551-56981570 | Msa1297050:CDS | 45.0% | |
| ! | CATGGAATGGATTCTGCATC+TGG | + | chr8_3:56981564-56981583 | Msa1297050:CDS | 45.0% |
| TTCTGCATCTGGAAACAGTG+CGG | + | chr8_3:56981575-56981594 | Msa1297050:CDS | 45.0% | |
| ! | GGGTGTGAAGAAAGCTTTGA+AGG | + | chr8_3:56981596-56981615 | Msa1297050:CDS | 45.0% |
| ! | TTCAGATCGTGCTACTGTGT+GGG | + | chr8_3:56981692-56981711 | Msa1297050:CDS | 45.0% |
| ! | AGTGGGAAAAACTGGTTTCC+TGG | - | chr8_3:56981919-56981938 | None:intergenic | 45.0% |
| CCTGTTCTCCAATTCAACAG+TGG | - | chr8_3:56981937-56981956 | None:intergenic | 45.0% | |
| CCACTGTTGAATTGGAGAAC+AGG | + | chr8_3:56981934-56981953 | Msa1297050:CDS | 45.0% | |
| TGATGCTGTGTGTGTAAAGG+GGG | - | chr8_3:56980188-56980207 | None:intergenic | 45.0% | |
| CCAGAGTCCAAAAAAGAAGG+AGG | - | chr8_3:56980328-56980347 | None:intergenic | 45.0% | |
| !!! | CCTCCTTCTTTTTTGGACTC+TGG | + | chr8_3:56980325-56980344 | Msa1297050:five_prime_UTR | 45.0% |
| TCACCGGAATTATCAACGGT+TGG | - | chr8_3:56980492-56980511 | None:intergenic | 45.0% | |
| GACGTCACCGGAATTATCAA+CGG | - | chr8_3:56980496-56980515 | None:intergenic | 45.0% | |
| ! | GAATTCTAGAAGCTTCCACG+CGG | + | chr8_3:56980851-56980870 | Msa1297050:CDS | 45.0% |
| ! | AATTCTAGAAGCTTCCACGC+GGG | + | chr8_3:56980852-56980871 | Msa1297050:CDS | 45.0% |
| TCTCTACATTGGAACCGTTG+TGG | + | chr8_3:56980903-56980922 | Msa1297050:CDS | 45.0% | |
| AAGCAGTTAGGTTCACTCAC+CGG | - | chr8_3:56980943-56980962 | None:intergenic | 45.0% | |
| AATGGATGCAACTCAGGACT+CGG | - | chr8_3:56981000-56981019 | None:intergenic | 45.0% | |
| ACGAGAGATTTAGTTAGCGG+CGG | - | chr8_3:56981024-56981043 | None:intergenic | 45.0% | |
| !! | CGTTGATTCTCATTCTCCAC+CGG | + | chr8_3:56981044-56981063 | Msa1297050:CDS | 45.0% |
| CAACCGTGAGACTAGAGAAA+CGG | + | chr8_3:56981101-56981120 | Msa1297050:CDS | 45.0% | |
| ! | TGAAATTGTGTTGACGGCGA+CGG | - | chr8_3:56981345-56981364 | None:intergenic | 45.0% |
| TTCAGCACAGTTCTCCTAGA+AGG | + | chr8_3:56981361-56981380 | Msa1297050:CDS | 45.0% | |
| GAAGAGAATTTCGGCCTTCT+AGG | - | chr8_3:56981378-56981397 | None:intergenic | 45.0% | |
| AGATGCATCAAATTCGGAGC+CGG | - | chr8_3:56981408-56981427 | None:intergenic | 45.0% | |
| CTTCTTCTTCCTCTGTTCCA+AGG | + | chr8_3:56981514-56981533 | Msa1297050:CDS | 45.0% | |
| CGAGTCCACTGATAATTCCT+TGG | - | chr8_3:56981534-56981553 | None:intergenic | 45.0% | |
| TCGGTCTATGAAGCATGGAA+TGG | + | chr8_3:56981551-56981570 | Msa1297050:CDS | 45.0% | |
| ! | CATGGAATGGATTCTGCATC+TGG | + | chr8_3:56981564-56981583 | Msa1297050:CDS | 45.0% |
| TTCTGCATCTGGAAACAGTG+CGG | + | chr8_3:56981575-56981594 | Msa1297050:CDS | 45.0% | |
| ! | GGGTGTGAAGAAAGCTTTGA+AGG | + | chr8_3:56981596-56981615 | Msa1297050:CDS | 45.0% |
| ! | TTCAGATCGTGCTACTGTGT+GGG | + | chr8_3:56981692-56981711 | Msa1297050:CDS | 45.0% |
| ! | AGTGGGAAAAACTGGTTTCC+TGG | - | chr8_3:56981919-56981938 | None:intergenic | 45.0% |
| CCTGTTCTCCAATTCAACAG+TGG | - | chr8_3:56981937-56981956 | None:intergenic | 45.0% | |
| CCACTGTTGAATTGGAGAAC+AGG | + | chr8_3:56981934-56981953 | Msa1297050:CDS | 45.0% | |
| AATGGAATGTCAGGAGAGGG+AGG | - | chr8_3:56980568-56980587 | None:intergenic | 50.0% | |
| ! | TTCTGGTTGTTTGCCACCAG+AGG | - | chr8_3:56980622-56980641 | None:intergenic | 50.0% |
| GCATTTGAACCTGACGGTGA+CGG | - | chr8_3:56980649-56980668 | None:intergenic | 50.0% | |
| ATCCTATCGGTAACCGCAAC+CGG | + | chr8_3:56980974-56980993 | Msa1297050:CDS | 50.0% | |
| GATTTAGTTAGCGGCGGCAA+TGG | - | chr8_3:56981018-56981037 | None:intergenic | 50.0% | |
| TGATTCTCATTCTCCACCGG+CGG | + | chr8_3:56981047-56981066 | Msa1297050:CDS | 50.0% | |
| TTCTTCTTCCTCGTCGTCTG+AGG | + | chr8_3:56981074-56981093 | Msa1297050:CDS | 50.0% | |
| ACGCCGTTTCTCTAGTCTCA+CGG | - | chr8_3:56981107-56981126 | None:intergenic | 50.0% | |
| TTGAGTGAAGACGATTCCCG+CGG | - | chr8_3:56981138-56981157 | None:intergenic | 50.0% | |
| ACCACCGGAGTTACAGTTAC+CGG | - | chr8_3:56981225-56981244 | None:intergenic | 50.0% | |
| CTCTTCGAATACGGAACCAC+CGG | - | chr8_3:56981240-56981259 | None:intergenic | 50.0% | |
| ! | TCGATTATCTGGTTCCTCGC+CGG | + | chr8_3:56981275-56981294 | Msa1297050:CDS | 50.0% |
| GAAGATACACTAACCACCGG+TGG | - | chr8_3:56981498-56981517 | None:intergenic | 50.0% | |
| ! | TGGACTCGGTCTATGAAGCA+TGG | + | chr8_3:56981546-56981565 | Msa1297050:CDS | 50.0% |
| TCTGCATCTGGAAACAGTGC+GGG | + | chr8_3:56981576-56981595 | Msa1297050:CDS | 50.0% | |
| ! | CTTCAGATCGTGCTACTGTG+TGG | + | chr8_3:56981691-56981710 | Msa1297050:CDS | 50.0% |
| AATGGAATGTCAGGAGAGGG+AGG | - | chr8_3:56980568-56980587 | None:intergenic | 50.0% | |
| ! | TTCTGGTTGTTTGCCACCAG+AGG | - | chr8_3:56980622-56980641 | None:intergenic | 50.0% |
| GCATTTGAACCTGACGGTGA+CGG | - | chr8_3:56980649-56980668 | None:intergenic | 50.0% | |
| ATCCTATCGGTAACCGCAAC+CGG | + | chr8_3:56980974-56980993 | Msa1297050:CDS | 50.0% | |
| GATTTAGTTAGCGGCGGCAA+TGG | - | chr8_3:56981018-56981037 | None:intergenic | 50.0% | |
| TGATTCTCATTCTCCACCGG+CGG | + | chr8_3:56981047-56981066 | Msa1297050:CDS | 50.0% | |
| TTCTTCTTCCTCGTCGTCTG+AGG | + | chr8_3:56981074-56981093 | Msa1297050:CDS | 50.0% | |
| ACGCCGTTTCTCTAGTCTCA+CGG | - | chr8_3:56981107-56981126 | None:intergenic | 50.0% | |
| TTGAGTGAAGACGATTCCCG+CGG | - | chr8_3:56981138-56981157 | None:intergenic | 50.0% | |
| ACCACCGGAGTTACAGTTAC+CGG | - | chr8_3:56981225-56981244 | None:intergenic | 50.0% | |
| CTCTTCGAATACGGAACCAC+CGG | - | chr8_3:56981240-56981259 | None:intergenic | 50.0% | |
| ! | TCGATTATCTGGTTCCTCGC+CGG | + | chr8_3:56981275-56981294 | Msa1297050:CDS | 50.0% |
| GAAGATACACTAACCACCGG+TGG | - | chr8_3:56981498-56981517 | None:intergenic | 50.0% | |
| ! | TGGACTCGGTCTATGAAGCA+TGG | + | chr8_3:56981546-56981565 | Msa1297050:CDS | 50.0% |
| TCTGCATCTGGAAACAGTGC+GGG | + | chr8_3:56981576-56981595 | Msa1297050:CDS | 50.0% | |
| ! | CTTCAGATCGTGCTACTGTG+TGG | + | chr8_3:56981691-56981710 | Msa1297050:CDS | 50.0% |
| TTGTTTGCCACCAGAGGAGG+TGG | - | chr8_3:56980616-56980635 | None:intergenic | 55.0% | |
| TGGTTGTTTGCCACCAGAGG+AGG | - | chr8_3:56980619-56980638 | None:intergenic | 55.0% | |
| AGTTCCGTTGGGCTCCACAA+CGG | - | chr8_3:56980920-56980939 | None:intergenic | 55.0% | |
| TCACTCACCGGAGTTCCGTT+GGG | - | chr8_3:56980931-56980950 | None:intergenic | 55.0% | |
| TTCACTCACCGGAGTTCCGT+TGG | - | chr8_3:56980932-56980951 | None:intergenic | 55.0% | |
| GAGGAAGAAGAAGACACCGC+CGG | - | chr8_3:56981066-56981085 | None:intergenic | 55.0% | |
| GTTGTCTTCCTCAGACGACG+AGG | - | chr8_3:56981085-56981104 | None:intergenic | 55.0% | |
| AAACGGCGTTTCATTCGCCG+CGG | + | chr8_3:56981118-56981137 | Msa1297050:CDS | 55.0% | |
| ! | AATTGTGTTGACGGCGACGG+CGG | - | chr8_3:56981342-56981361 | None:intergenic | 55.0% |
| ! | GGTGGCGGCGAAGAGAATTT+CGG | - | chr8_3:56981387-56981406 | None:intergenic | 55.0% |
| GAAATTCTCTTCGCCGCCAC+CGG | + | chr8_3:56981386-56981405 | Msa1297050:CDS | 55.0% | |
| ATCAAATTCGGAGCCGGTGG+CGG | - | chr8_3:56981402-56981421 | None:intergenic | 55.0% | |
| TGCATCAAATTCGGAGCCGG+TGG | - | chr8_3:56981405-56981424 | None:intergenic | 55.0% | |
| GATACACTAACCACCGGTGG+CGG | - | chr8_3:56981495-56981514 | None:intergenic | 55.0% | |
| TTGTTTGCCACCAGAGGAGG+TGG | - | chr8_3:56980616-56980635 | None:intergenic | 55.0% | |
| TGGTTGTTTGCCACCAGAGG+AGG | - | chr8_3:56980619-56980638 | None:intergenic | 55.0% | |
| AGTTCCGTTGGGCTCCACAA+CGG | - | chr8_3:56980920-56980939 | None:intergenic | 55.0% | |
| TCACTCACCGGAGTTCCGTT+GGG | - | chr8_3:56980931-56980950 | None:intergenic | 55.0% | |
| TTCACTCACCGGAGTTCCGT+TGG | - | chr8_3:56980932-56980951 | None:intergenic | 55.0% | |
| GAGGAAGAAGAAGACACCGC+CGG | - | chr8_3:56981066-56981085 | None:intergenic | 55.0% | |
| GTTGTCTTCCTCAGACGACG+AGG | - | chr8_3:56981085-56981104 | None:intergenic | 55.0% | |
| AAACGGCGTTTCATTCGCCG+CGG | + | chr8_3:56981118-56981137 | Msa1297050:CDS | 55.0% | |
| ! | AATTGTGTTGACGGCGACGG+CGG | - | chr8_3:56981342-56981361 | None:intergenic | 55.0% |
| ! | GGTGGCGGCGAAGAGAATTT+CGG | - | chr8_3:56981387-56981406 | None:intergenic | 55.0% |
| GAAATTCTCTTCGCCGCCAC+CGG | + | chr8_3:56981386-56981405 | Msa1297050:CDS | 55.0% | |
| ATCAAATTCGGAGCCGGTGG+CGG | - | chr8_3:56981402-56981421 | None:intergenic | 55.0% | |
| TGCATCAAATTCGGAGCCGG+TGG | - | chr8_3:56981405-56981424 | None:intergenic | 55.0% | |
| GATACACTAACCACCGGTGG+CGG | - | chr8_3:56981495-56981514 | None:intergenic | 55.0% | |
| GGAGGAGGCGGAGAGAATTC+CGG | - | chr8_3:56980529-56980548 | None:intergenic | 60.0% | |
| TTGTCTGGTGGAGGAGGAGG+CGG | - | chr8_3:56980541-56980560 | None:intergenic | 60.0% | |
| GTGTTGTCTGGTGGAGGAGG+AGG | - | chr8_3:56980544-56980563 | None:intergenic | 60.0% | |
| !! | GGAGTGTTGTCTGGTGGAGG+AGG | - | chr8_3:56980547-56980566 | None:intergenic | 60.0% |
| !! | GGAGGAGTGTTGTCTGGTGG+AGG | - | chr8_3:56980550-56980569 | None:intergenic | 60.0% |
| !! | GAGGGAGGAGTGTTGTCTGG+TGG | - | chr8_3:56980553-56980572 | None:intergenic | 60.0% |
| !! | GGAGAGGGAGGAGTGTTGTC+TGG | - | chr8_3:56980556-56980575 | None:intergenic | 60.0% |
| TTTGCCACCAGAGGAGGTGG+TGG | - | chr8_3:56980613-56980632 | None:intergenic | 60.0% | |
| ! | TTGAACCTGACGGTGACGGC+AGG | - | chr8_3:56980645-56980664 | None:intergenic | 60.0% |
| GGAACCGTTGTGGAGCCCAA+CGG | + | chr8_3:56980913-56980932 | Msa1297050:CDS | 60.0% | |
| TGTGGAGCCCAACGGAACTC+CGG | + | chr8_3:56980921-56980940 | Msa1297050:CDS | 60.0% | |
| GATGCAACTCAGGACTCGGC+CGG | - | chr8_3:56980996-56981015 | None:intergenic | 60.0% | |
| GGCGGCAATGGATGCAACTC+AGG | - | chr8_3:56981006-56981025 | None:intergenic | 60.0% | |
| GAAGAAGAAGACACCGCCGG+TGG | - | chr8_3:56981063-56981082 | None:intergenic | 60.0% | |
| AACGGCGTTTCATTCGCCGC+GGG | + | chr8_3:56981119-56981138 | Msa1297050:CDS | 60.0% | |
| CCGTGACTTCGACGCGAAAC+CGG | - | chr8_3:56981189-56981208 | None:intergenic | 60.0% | |
| CCGGTTTCGCGTCGAAGTCA+CGG | + | chr8_3:56981186-56981205 | Msa1297050:CDS | 60.0% | |
| GTTACAGTTACCGGCGCGGT+GGG | - | chr8_3:56981216-56981235 | None:intergenic | 60.0% | |
| AGTTACAGTTACCGGCGCGG+TGG | - | chr8_3:56981217-56981236 | None:intergenic | 60.0% | |
| CGGAGTTACAGTTACCGGCG+CGG | - | chr8_3:56981220-56981239 | None:intergenic | 60.0% | |
| ! | CGCGCCGGTAACTGTAACTC+CGG | + | chr8_3:56981218-56981237 | Msa1297050:CDS | 60.0% |
| GCCGGTAACTGTAACTCCGG+TGG | + | chr8_3:56981221-56981240 | Msa1297050:CDS | 60.0% | |
| TACGCGTTTCATCTCCGGCG+AGG | - | chr8_3:56981292-56981311 | None:intergenic | 60.0% | |
| GGAGGAGGCGGAGAGAATTC+CGG | - | chr8_3:56980529-56980548 | None:intergenic | 60.0% | |
| TTGTCTGGTGGAGGAGGAGG+CGG | - | chr8_3:56980541-56980560 | None:intergenic | 60.0% | |
| GTGTTGTCTGGTGGAGGAGG+AGG | - | chr8_3:56980544-56980563 | None:intergenic | 60.0% | |
| !! | GGAGTGTTGTCTGGTGGAGG+AGG | - | chr8_3:56980547-56980566 | None:intergenic | 60.0% |
| !! | GGAGGAGTGTTGTCTGGTGG+AGG | - | chr8_3:56980550-56980569 | None:intergenic | 60.0% |
| !! | GAGGGAGGAGTGTTGTCTGG+TGG | - | chr8_3:56980553-56980572 | None:intergenic | 60.0% |
| !! | GGAGAGGGAGGAGTGTTGTC+TGG | - | chr8_3:56980556-56980575 | None:intergenic | 60.0% |
| TTTGCCACCAGAGGAGGTGG+TGG | - | chr8_3:56980613-56980632 | None:intergenic | 60.0% | |
| ! | TTGAACCTGACGGTGACGGC+AGG | - | chr8_3:56980645-56980664 | None:intergenic | 60.0% |
| GGAACCGTTGTGGAGCCCAA+CGG | + | chr8_3:56980913-56980932 | Msa1297050:CDS | 60.0% | |
| TGTGGAGCCCAACGGAACTC+CGG | + | chr8_3:56980921-56980940 | Msa1297050:CDS | 60.0% | |
| GATGCAACTCAGGACTCGGC+CGG | - | chr8_3:56980996-56981015 | None:intergenic | 60.0% | |
| GGCGGCAATGGATGCAACTC+AGG | - | chr8_3:56981006-56981025 | None:intergenic | 60.0% | |
| GAAGAAGAAGACACCGCCGG+TGG | - | chr8_3:56981063-56981082 | None:intergenic | 60.0% | |
| AACGGCGTTTCATTCGCCGC+GGG | + | chr8_3:56981119-56981138 | Msa1297050:CDS | 60.0% | |
| CCGTGACTTCGACGCGAAAC+CGG | - | chr8_3:56981189-56981208 | None:intergenic | 60.0% | |
| CCGGTTTCGCGTCGAAGTCA+CGG | + | chr8_3:56981186-56981205 | Msa1297050:CDS | 60.0% | |
| GTTACAGTTACCGGCGCGGT+GGG | - | chr8_3:56981216-56981235 | None:intergenic | 60.0% | |
| AGTTACAGTTACCGGCGCGG+TGG | - | chr8_3:56981217-56981236 | None:intergenic | 60.0% | |
| CGGAGTTACAGTTACCGGCG+CGG | - | chr8_3:56981220-56981239 | None:intergenic | 60.0% | |
| ! | CGCGCCGGTAACTGTAACTC+CGG | + | chr8_3:56981218-56981237 | Msa1297050:CDS | 60.0% |
| GCCGGTAACTGTAACTCCGG+TGG | + | chr8_3:56981221-56981240 | Msa1297050:CDS | 60.0% | |
| TACGCGTTTCATCTCCGGCG+AGG | - | chr8_3:56981292-56981311 | None:intergenic | 60.0% | |
| GGAGGCGGAGAGAATTCCGG+CGG | - | chr8_3:56980526-56980545 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGGTGGTCCGGTT+GGG | - | chr8_3:56980603-56980622 | None:intergenic | 65.0% |
| ! | AGAGGAGGTGGTGGTCCGGT+TGG | - | chr8_3:56980604-56980623 | None:intergenic | 65.0% |
| AACCGGACCACCACCTCCTC+TGG | + | chr8_3:56980603-56980622 | Msa1297050:CDS | 65.0% | |
| ! | CACCAGAGGAGGTGGTGGTC+CGG | - | chr8_3:56980608-56980627 | None:intergenic | 65.0% |
| ! | CTGACGGTGACGGCAGGTTC+TGG | - | chr8_3:56980639-56980658 | None:intergenic | 65.0% |
| CAGAACCTGCCGTCACCGTC+AGG | + | chr8_3:56980637-56980656 | Msa1297050:CDS | 65.0% | |
| GGCCGGTTGCGGTTACCGAT+AGG | - | chr8_3:56980979-56980998 | None:intergenic | 65.0% | |
| ACTCAGGACTCGGCCGGTTG+CGG | - | chr8_3:56980990-56981009 | None:intergenic | 65.0% | |
| ! | ACACTAACCACCGGTGGCGG+AGG | - | chr8_3:56981492-56981511 | None:intergenic | 65.0% |
| GGAGGCGGAGAGAATTCCGG+CGG | - | chr8_3:56980526-56980545 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGGTGGTCCGGTT+GGG | - | chr8_3:56980603-56980622 | None:intergenic | 65.0% |
| ! | AGAGGAGGTGGTGGTCCGGT+TGG | - | chr8_3:56980604-56980623 | None:intergenic | 65.0% |
| AACCGGACCACCACCTCCTC+TGG | + | chr8_3:56980603-56980622 | Msa1297050:CDS | 65.0% | |
| ! | CACCAGAGGAGGTGGTGGTC+CGG | - | chr8_3:56980608-56980627 | None:intergenic | 65.0% |
| ! | CTGACGGTGACGGCAGGTTC+TGG | - | chr8_3:56980639-56980658 | None:intergenic | 65.0% |
| CAGAACCTGCCGTCACCGTC+AGG | + | chr8_3:56980637-56980656 | Msa1297050:CDS | 65.0% | |
| GGCCGGTTGCGGTTACCGAT+AGG | - | chr8_3:56980979-56980998 | None:intergenic | 65.0% | |
| ACTCAGGACTCGGCCGGTTG+CGG | - | chr8_3:56980990-56981009 | None:intergenic | 65.0% | |
| ! | ACACTAACCACCGGTGGCGG+AGG | - | chr8_3:56981492-56981511 | None:intergenic | 65.0% |
| GGCGGAGAGAATTCCGGCGG+CGG | - | chr8_3:56980523-56980542 | None:intergenic | 70.0% | |
| CGGACCACCACCTCCTCTGG+TGG | + | chr8_3:56980606-56980625 | Msa1297050:CDS | 70.0% | |
| !! | AGAAGGTGGTGGGACCCGCG+TGG | - | chr8_3:56980869-56980888 | None:intergenic | 70.0% |
| TCACGGAAGTCCCACCGCGC+CGG | + | chr8_3:56981203-56981222 | Msa1297050:CDS | 70.0% | |
| TCCACCACCTCCTCCGCCAC+CGG | + | chr8_3:56981479-56981498 | Msa1297050:CDS | 70.0% | |
| !! | CTAACCACCGGTGGCGGAGG+AGG | - | chr8_3:56981489-56981508 | None:intergenic | 70.0% |
| GGCGGAGAGAATTCCGGCGG+CGG | - | chr8_3:56980523-56980542 | None:intergenic | 70.0% | |
| CGGACCACCACCTCCTCTGG+TGG | + | chr8_3:56980606-56980625 | Msa1297050:CDS | 70.0% | |
| !! | AGAAGGTGGTGGGACCCGCG+TGG | - | chr8_3:56980869-56980888 | None:intergenic | 70.0% |
| TCACGGAAGTCCCACCGCGC+CGG | + | chr8_3:56981203-56981222 | Msa1297050:CDS | 70.0% | |
| TCCACCACCTCCTCCGCCAC+CGG | + | chr8_3:56981479-56981498 | Msa1297050:CDS | 70.0% | |
| !! | CTAACCACCGGTGGCGGAGG+AGG | - | chr8_3:56981489-56981508 | None:intergenic | 70.0% |
| GGCGGCGGAGCAGACGTCAC+CGG | - | chr8_3:56980508-56980527 | None:intergenic | 75.0% | |
| GGTGACGTCTGCTCCGCCGC+CGG | + | chr8_3:56980507-56980526 | Msa1297050:CDS | 75.0% | |
| GGTGGAGGCGGTCGAGGAGG+AGG | - | chr8_3:56981465-56981484 | None:intergenic | 75.0% | |
| !! | GGTGGTGGAGGCGGTCGAGG+AGG | - | chr8_3:56981468-56981487 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGAGGCGGTCG+AGG | - | chr8_3:56981471-56981490 | None:intergenic | 75.0% |
| !! | GGCGGAGGAGGTGGTGGAGG+CGG | - | chr8_3:56981477-56981496 | None:intergenic | 75.0% |
| !! | GGTGGCGGAGGAGGTGGTGG+AGG | - | chr8_3:56981480-56981499 | None:intergenic | 75.0% |
| !! | ACCGGTGGCGGAGGAGGTGG+TGG | - | chr8_3:56981483-56981502 | None:intergenic | 75.0% |
| ACCACCTCCTCCGCCACCGG+TGG | + | chr8_3:56981482-56981501 | Msa1297050:CDS | 75.0% | |
| !! | ACCACCGGTGGCGGAGGAGG+TGG | - | chr8_3:56981486-56981505 | None:intergenic | 75.0% |
| GGCGGCGGAGCAGACGTCAC+CGG | - | chr8_3:56980508-56980527 | None:intergenic | 75.0% | |
| GGTGACGTCTGCTCCGCCGC+CGG | + | chr8_3:56980507-56980526 | Msa1297050:CDS | 75.0% | |
| GGTGGAGGCGGTCGAGGAGG+AGG | - | chr8_3:56981465-56981484 | None:intergenic | 75.0% | |
| !! | GGTGGTGGAGGCGGTCGAGG+AGG | - | chr8_3:56981468-56981487 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGAGGCGGTCG+AGG | - | chr8_3:56981471-56981490 | None:intergenic | 75.0% |
| !! | GGCGGAGGAGGTGGTGGAGG+CGG | - | chr8_3:56981477-56981496 | None:intergenic | 75.0% |
| !! | GGTGGCGGAGGAGGTGGTGG+AGG | - | chr8_3:56981480-56981499 | None:intergenic | 75.0% |
| !! | ACCGGTGGCGGAGGAGGTGG+TGG | - | chr8_3:56981483-56981502 | None:intergenic | 75.0% |
| ACCACCTCCTCCGCCACCGG+TGG | + | chr8_3:56981482-56981501 | Msa1297050:CDS | 75.0% | |
| !! | ACCACCGGTGGCGGAGGAGG+TGG | - | chr8_3:56981486-56981505 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 56980175 | 56982067 | 56980175 | ID=Msa1297050;Name=Msa1297050 |
| chr8_3 | mRNA | 56980175 | 56982067 | 56980175 | ID=Msa1297050-mRNA-1;Parent=Msa1297050;Name=Msa1297050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=225|1|0.5|1|1|1|2|0|523 |
| chr8_3 | exon | 56980175 | 56981739 | 56980175 | ID=Msa1297050-mRNA-1:exon:16311;Parent=Msa1297050-mRNA-1 |
| chr8_3 | exon | 56981836 | 56982067 | 56981836 | ID=Msa1297050-mRNA-1:exon:16312;Parent=Msa1297050-mRNA-1 |
| chr8_3 | five_prime_UTR | 56980175 | 56980399 | 56980175 | ID=Msa1297050-mRNA-1:five_prime_utr;Parent=Msa1297050-mRNA-1 |
| chr8_3 | CDS | 56980400 | 56981739 | 56980400 | ID=Msa1297050-mRNA-1:cds;Parent=Msa1297050-mRNA-1 |
| chr8_3 | CDS | 56981836 | 56982067 | 56981836 | ID=Msa1297050-mRNA-1:cds;Parent=Msa1297050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
