Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347310 | XP_013444012.1 | 98.172 | 547 | 10 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347310 | sp|Q67ZB3|FRL3_ARATH | 59.278 | 582 | 178 | 13 | 1 | 547 | 1 | 558 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347310 | A0A072TKI7 | 98.172 | 547 | 10 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1120 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1347310 | 0.834141 | 3.559014e-56 | -8.615850e-47 |
| Msa0001940 | Msa1347310 | 0.814753 | 1.311870e-51 | -8.615850e-47 |
| Msa0005890 | Msa1347310 | 0.808615 | 2.839273e-50 | -8.615850e-47 |
| Msa0017950 | Msa1347310 | 0.815138 | 1.077772e-51 | -8.615850e-47 |
| Msa0035060 | Msa1347310 | 0.814485 | 1.504097e-51 | -8.615850e-47 |
| Msa0038290 | Msa1347310 | -0.805542 | 1.269273e-49 | -8.615850e-47 |
| Msa0077340 | Msa1347310 | 0.812461 | 4.190530e-51 | -8.615850e-47 |
| Msa0081090 | Msa1347310 | 0.807484 | 4.941210e-50 | -8.615850e-47 |
| Msa0081390 | Msa1347310 | 0.856301 | 3.528736e-62 | -8.615850e-47 |
| Msa0081450 | Msa1347310 | 0.850873 | 1.281635e-60 | -8.615850e-47 |
| Msa0081780 | Msa1347310 | 0.825663 | 4.146856e-54 | -8.615850e-47 |
| Msa0101500 | Msa1347310 | -0.809254 | 2.072200e-50 | -8.615850e-47 |
| Msa1345100 | Msa1347310 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa1347310 | Msa1353980 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa1347310 | Msa1363740 | 0.800235 | 1.585041e-48 | -8.615850e-47 |
| Msa1347310 | Msa1372040 | 0.820071 | 8.324134e-53 | -8.615850e-47 |
| Msa1347310 | Msa1372230 | 0.828271 | 9.862530e-55 | -8.615850e-47 |
| Msa1347310 | Msa1405460 | 0.826698 | 2.352148e-54 | -8.615850e-47 |
| Msa1347310 | Msa1414640 | 0.839915 | 1.190793e-57 | -8.615850e-47 |
| Msa1347310 | Msa1419690 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0611210 | Msa1347310 | 0.867495 | 1.311959e-65 | -8.615850e-47 |
| Msa0631170 | Msa1347310 | 0.803366 | 3.608202e-49 | -8.615850e-47 |
| Msa0651550 | Msa1347310 | 0.881805 | 1.768065e-70 | -8.615850e-47 |
| Msa0674560 | Msa1347310 | 0.818852 | 1.578637e-52 | -8.615850e-47 |
| Msa0692980 | Msa1347310 | 0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa0697160 | Msa1347310 | 0.812967 | 3.247692e-51 | -8.615850e-47 |
| Msa0699280 | Msa1347310 | 0.825013 | 5.906735e-54 | -8.615850e-47 |
| Msa0732580 | Msa1347310 | 0.807933 | 3.966771e-50 | -8.615850e-47 |
| Msa0741220 | Msa1347310 | 0.802055 | 6.728230e-49 | -8.615850e-47 |
| Msa0741650 | Msa1347310 | 0.838934 | 2.141279e-57 | -8.615850e-47 |
| Msa0741840 | Msa1347310 | 0.808321 | 3.280199e-50 | -8.615850e-47 |
| Msa0748910 | Msa1347310 | 0.809997 | 1.434456e-50 | -8.615850e-47 |
| Msa0765910 | Msa1347310 | 0.813303 | 2.740821e-51 | -8.615850e-47 |
| Msa0779130 | Msa1347310 | -0.803687 | 3.094900e-49 | -8.615850e-47 |
| Msa0795870 | Msa1347310 | 0.813867 | 2.059556e-51 | -8.615850e-47 |
| Msa0819170 | Msa1347310 | 0.807193 | 5.695361e-50 | -8.615850e-47 |
| Msa0826950 | Msa1347310 | 0.808902 | 2.465065e-50 | -8.615850e-47 |
| Msa0829300 | Msa1347310 | 0.843865 | 1.077132e-58 | -8.615850e-47 |
| Msa0829330 | Msa1347310 | 0.823806 | 1.136073e-53 | -8.615850e-47 |
| Msa0833650 | Msa1347310 | 0.829852 | 4.082795e-55 | -8.615850e-47 |
| Msa0132630 | Msa1347310 | -0.823611 | 1.262183e-53 | -8.615850e-47 |
| Msa0173690 | Msa1347310 | 0.849772 | 2.608598e-60 | -8.615850e-47 |
| Msa0175750 | Msa1347310 | 0.804252 | 2.361537e-49 | -8.615850e-47 |
| Msa0178560 | Msa1347310 | 0.845665 | 3.524091e-59 | -8.615850e-47 |
| Msa0191230 | Msa1347310 | 0.812926 | 3.316108e-51 | -8.615850e-47 |
| Msa0205110 | Msa1347310 | 0.801735 | 7.824469e-49 | -8.615850e-47 |
| Msa0211030 | Msa1347310 | 0.846584 | 1.981306e-59 | -8.615850e-47 |
| Msa0211150 | Msa1347310 | 0.805467 | 1.316427e-49 | -8.615850e-47 |
| Msa0213410 | Msa1347310 | 0.808726 | 2.688635e-50 | -8.615850e-47 |
| Msa0231200 | Msa1347310 | 0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa1228040 | Msa1347310 | 0.812376 | 4.373414e-51 | -8.615850e-47 |
| Msa1228200 | Msa1347310 | 0.821507 | 3.892408e-53 | -8.615850e-47 |
| Msa1243490 | Msa1347310 | 0.812270 | 4.612909e-51 | -8.615850e-47 |
| Msa1297230 | Msa1347310 | 0.823457 | 1.370942e-53 | -8.615850e-47 |
| Msa1303560 | Msa1347310 | 0.803217 | 3.874172e-49 | -8.615850e-47 |
| Msa1303650 | Msa1347310 | 0.801930 | 7.135542e-49 | -8.615850e-47 |
| Msa1308820 | Msa1347310 | 0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa1314650 | Msa1347310 | 0.833385 | 5.497895e-56 | -8.615850e-47 |
| Msa1343430 | Msa1347310 | 0.823659 | 1.229635e-53 | -8.615850e-47 |
| Msa0376630 | Msa1347310 | 0.825270 | 5.135603e-54 | -8.615850e-47 |
| Msa0379650 | Msa1347310 | 0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0403950 | Msa1347310 | 0.803501 | 3.383006e-49 | -8.615850e-47 |
| Msa0405680 | Msa1347310 | 0.822500 | 2.291224e-53 | -8.615850e-47 |
| Msa0467490 | Msa1347310 | 0.803825 | 2.897643e-49 | -8.615850e-47 |
| Msa0468270 | Msa1347310 | 0.843977 | 1.005159e-58 | -8.615850e-47 |
| Msa0471670 | Msa1347310 | 0.814530 | 1.470311e-51 | -8.615850e-47 |
| Msa1021590 | Msa1347310 | 0.804815 | 1.802386e-49 | -8.615850e-47 |
| Msa1035960 | Msa1347310 | 0.807244 | 5.556256e-50 | -8.615850e-47 |
| Msa1044680 | Msa1347310 | 0.842625 | 2.306944e-58 | -8.615850e-47 |
| Msa1064370 | Msa1347310 | 0.841516 | 4.532147e-58 | -8.615850e-47 |
| Msa1090140 | Msa1347310 | 0.800146 | 1.652866e-48 | -8.615850e-47 |
| Msa1101090 | Msa1347310 | 0.801215 | 1.000271e-48 | -8.615850e-47 |
| Msa1103990 | Msa1347310 | 0.810291 | 1.240091e-50 | -8.615850e-47 |
| Msa1105640 | Msa1347310 | 0.831099 | 2.022425e-55 | -8.615850e-47 |
| Msa0244640 | Msa1347310 | 0.839245 | 1.778029e-57 | -8.615850e-47 |
| Msa0249860 | Msa1347310 | 0.803551 | 3.302669e-49 | -8.615850e-47 |
| Msa0267920 | Msa1347310 | 0.810416 | 1.165043e-50 | -8.615850e-47 |
| Msa0270340 | Msa1347310 | 0.817153 | 3.821723e-52 | -8.615850e-47 |
| Msa0272770 | Msa1347310 | 0.826184 | 3.118765e-54 | -8.615850e-47 |
| Msa0274980 | Msa1347310 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0283330 | Msa1347310 | 0.831848 | 1.322460e-55 | -8.615850e-47 |
| Msa0315690 | Msa1347310 | 0.819447 | 1.156061e-52 | -8.615850e-47 |
| Msa0321620 | Msa1347310 | 0.847123 | 1.410961e-59 | -8.615850e-47 |
| Msa0323270 | Msa1347310 | 0.823754 | 1.168166e-53 | -8.615850e-47 |
| Msa0337700 | Msa1347310 | 0.811332 | 7.383539e-51 | -8.615850e-47 |
| Msa0342310 | Msa1347310 | 0.822942 | 1.808402e-53 | -8.615850e-47 |
| Msa0349210 | Msa1347310 | 0.816894 | 4.370268e-52 | -8.615850e-47 |
| Msa1132840 | Msa1347310 | 0.835523 | 1.597293e-56 | -8.615850e-47 |
| Msa1145810 | Msa1347310 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa1148960 | Msa1347310 | 0.814888 | 1.224518e-51 | -8.615850e-47 |
| Msa1155170 | Msa1347310 | -0.809692 | 1.668569e-50 | -8.615850e-47 |
| Msa1186020 | Msa1347310 | 0.832595 | 8.644196e-56 | -8.615850e-47 |
| Msa1200890 | Msa1347310 | 0.807598 | 4.674932e-50 | -8.615850e-47 |
| Msa1205280 | Msa1347310 | 0.840933 | 6.452262e-58 | -8.615850e-47 |
| Msa0519750 | Msa1347310 | 0.811067 | 8.427806e-51 | -8.615850e-47 |
| Msa0519820 | Msa1347310 | 0.802689 | 4.980817e-49 | -8.615850e-47 |
| Msa0519830 | Msa1347310 | 0.819648 | 1.039898e-52 | -8.615850e-47 |
| Msa0529030 | Msa1347310 | 0.829433 | 5.160687e-55 | -8.615850e-47 |
| Msa0530780 | Msa1347310 | 0.856720 | 2.657367e-62 | -8.615850e-47 |
| Msa0547170 | Msa1347310 | 0.833781 | 4.378236e-56 | -8.615850e-47 |
| Msa0565090 | Msa1347310 | 0.805304 | 1.423776e-49 | -8.615850e-47 |
| Msa0580370 | Msa1347310 | 0.834448 | 2.979264e-56 | -8.615850e-47 |
| Msa0581470 | Msa1347310 | 0.811070 | 8.413789e-51 | -8.615850e-47 |
| Msa0590830 | Msa1347310 | 0.800475 | 1.416488e-48 | -8.615850e-47 |
| Msa0881360 | Msa1347310 | 0.820352 | 7.176535e-53 | -8.615850e-47 |
| Msa0894400 | Msa1347310 | 0.845094 | 5.030423e-59 | -8.615850e-47 |
| Msa0898750 | Msa1347310 | 0.802913 | 4.476095e-49 | -8.615850e-47 |
| Msa0919860 | Msa1347310 | 0.812818 | 3.501876e-51 | -8.615850e-47 |
| Msa0945630 | Msa1347310 | 0.827011 | 1.979736e-54 | -8.615850e-47 |
| Msa0964310 | Msa1347310 | 0.817130 | 3.867531e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347310 | MtrunA17_Chr8g0337651 | 98.172 | 547 | 10 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1120 |
| Msa1347310 | MtrunA17_Chr8g0337661 | 79.159 | 547 | 112 | 1 | 1 | 547 | 1 | 545 | 0.0 | 901 |
| Msa1347310 | MtrunA17_Chr4g0053711 | 38.391 | 547 | 293 | 15 | 16 | 540 | 14 | 538 | 1.47e-105 | 327 |
| Msa1347310 | MtrunA17_Chr1g0205391 | 29.563 | 504 | 289 | 13 | 37 | 528 | 32 | 481 | 8.12e-47 | 171 |
| Msa1347310 | MtrunA17_Chr8g0390621 | 27.974 | 454 | 254 | 12 | 4 | 454 | 3 | 386 | 1.04e-38 | 149 |
| Msa1347310 | MtrunA17_Chr3g0101121 | 30.690 | 290 | 182 | 5 | 171 | 460 | 100 | 370 | 6.55e-33 | 132 |
| Msa1347310 | MtrunA17_Chr5g0445281 | 25.636 | 472 | 281 | 12 | 38 | 507 | 41 | 444 | 4.75e-29 | 121 |
| Msa1347310 | MtrunA17_Chr3g0131341 | 25.260 | 289 | 203 | 7 | 175 | 458 | 155 | 435 | 2.96e-19 | 91.7 |
| Msa1347310 | MtrunA17_Chr2g0325711 | 28.571 | 168 | 105 | 4 | 263 | 425 | 653 | 810 | 9.44e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347310 | AT5G48385.1 | 59.278 | 582 | 178 | 13 | 1 | 547 | 1 | 558 | 0.0 | 612 |
| Msa1347310 | AT3G22440.1 | 29.050 | 537 | 313 | 14 | 22 | 539 | 15 | 502 | 8.29e-56 | 196 |
| Msa1347310 | AT4G14900.1 | 29.044 | 544 | 318 | 17 | 18 | 545 | 11 | 502 | 2.31e-51 | 184 |
| Msa1347310 | AT1G31814.1 | 31.677 | 322 | 191 | 9 | 167 | 480 | 85 | 385 | 1.47e-40 | 153 |
| Msa1347310 | AT5G16320.1 | 31.908 | 304 | 182 | 6 | 170 | 471 | 99 | 379 | 1.23e-37 | 145 |
| Msa1347310 | AT5G27230.1 | 27.273 | 253 | 167 | 5 | 200 | 450 | 566 | 803 | 3.70e-17 | 85.9 |
| Msa1347310 | AT5G27220.1 | 27.684 | 177 | 118 | 2 | 268 | 444 | 918 | 1084 | 8.73e-11 | 65.5 |
| Msa1347310 | AT5G27220.3 | 27.684 | 177 | 118 | 2 | 268 | 444 | 918 | 1084 | 8.73e-11 | 65.5 |
Find 130 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCTGGAAATGGAAATT+TGG | 0.146869 | tig0009650:-16723 | Msa1347310:CDS |
| AAGAAGGATGCTAACTTATT+AGG | 0.255479 | tig0009650:-16494 | Msa1347310:CDS |
| GTAAGAACCTTGCTGCTATA+AGG | 0.264350 | tig0009650:-16619 | Msa1347310:CDS |
| TGCAGGAGTAATTGAGGTTT+TGG | 0.268589 | tig0009650:-15913 | Msa1347310:intron |
| TTCAAGTTCCGTTCCCGTTT+TGG | 0.282102 | tig0009650:+18960 | None:intergenic |
| ATGTCAAGAGCATCCAATTT+AGG | 0.286497 | tig0009650:+16344 | None:intergenic |
| AATTCCAAATTTCCATTTCC+AGG | 0.297621 | tig0009650:+16719 | None:intergenic |
| CTTACTGAAGTCTTATTTGC+AGG | 0.298803 | tig0009650:-15814 | Msa1347310:CDS |
| GAAGAAGATGAAGAAGAAAA+AGG | 0.306276 | tig0009650:+18829 | None:intergenic |
| AGTGATTTCCTGACTGATTC+AGG | 0.317241 | tig0009650:-16434 | Msa1347310:CDS |
| ATGTTTAGTGTTAGATTCTT+TGG | 0.338403 | tig0009650:-16555 | Msa1347310:CDS |
| CTGTTACTCTTAACATGAAA+TGG | 0.348629 | tig0009650:-17096 | Msa1347310:CDS |
| CTGCAATGTGGCTTGCTCCT+TGG | 0.363624 | tig0009650:+16931 | None:intergenic |
| GTGAAACTTTCTCCTGGAAA+TGG | 0.366686 | tig0009650:-16731 | Msa1347310:CDS |
| CAGCTTTCGCCTTCTCTAGT+TGG | 0.366854 | tig0009650:+15049 | None:intergenic |
| CCGTTAGCACGAGGTCTCTT+TGG | 0.370940 | tig0009650:+14991 | None:intergenic |
| CATAAGCATATTGTGTTTGC+GGG | 0.371056 | tig0009650:+14896 | None:intergenic |
| CATGGAAACTACTTTGGAAA+TGG | 0.381276 | tig0009650:-14790 | Msa1347310:CDS |
| ACCAGACGCAATACGAAAAC+TGG | 0.381462 | tig0009650:+16268 | None:intergenic |
| CGTGCTAACGGTGTGGGATA+TGG | 0.385558 | tig0009650:-14979 | Msa1347310:CDS |
| ATTGTCTTTGTAGTATGTTT+TGG | 0.386422 | tig0009650:-14544 | Msa1347310:three_prime_UTR |
| CATAACCATGGAAACTACTT+TGG | 0.397650 | tig0009650:-14796 | Msa1347310:CDS |
| TGAAGAATGGAAGCCTAAAT+TGG | 0.398597 | tig0009650:-16357 | Msa1347310:CDS |
| GTTCAACATACAACATCTTA+AGG | 0.398958 | tig0009650:+14679 | None:intergenic |
| ATTCTTGCTCACCTGTCAAA+AGG | 0.401992 | tig0009650:-15782 | Msa1347310:CDS |
| GCAAATTGACGCTGTTAACT+TGG | 0.422848 | tig0009650:-15877 | Msa1347310:CDS |
| TGTAGAGAGATGGATGTCTC+TGG | 0.428452 | tig0009650:-16668 | Msa1347310:CDS |
| TAAGAACCTTGCTGCTATAA+GGG | 0.437970 | tig0009650:-16618 | Msa1347310:CDS |
| TAGTTTCTTTCAGATCAATC+AGG | 0.437971 | tig0009650:-18705 | Msa1347310:intron |
| AACACTAAACATGCAGCATT+AGG | 0.444227 | tig0009650:+16566 | None:intergenic |
| TATCAGAATTCAAACATTAG+AGG | 0.447578 | tig0009650:+14566 | None:intergenic |
| CAATGATTGTCAGTTGGTGC+AGG | 0.453613 | tig0009650:+14856 | None:intergenic |
| GACTAGATATATTAAACAAA+AGG | 0.453705 | tig0009650:+14706 | None:intergenic |
| TAAGACTTCAGTAAGGAAAC+AGG | 0.458604 | tig0009650:+15822 | None:intergenic |
| ATTTGGCCATTGTCTCCAAT+GGG | 0.460817 | tig0009650:-16829 | Msa1347310:CDS |
| AACGGCATAAATCAGCAGTT+TGG | 0.462780 | tig0009650:+16195 | None:intergenic |
| TTATAGCAGCAAGGTTCTTA+CGG | 0.464979 | tig0009650:+16621 | None:intergenic |
| ACATTCCATCAGCATGATAC+AGG | 0.465654 | tig0009650:+16460 | None:intergenic |
| GATTTGGCCATTGTCTCCAA+TGG | 0.471808 | tig0009650:-16830 | Msa1347310:CDS |
| CAAAGGCAGTTGCTGAAGAA+TGG | 0.473483 | tig0009650:-16370 | Msa1347310:CDS |
| TGCTAGCAACGGGAATTCCT+TGG | 0.479571 | tig0009650:-16318 | Msa1347310:CDS |
| GGCTAATTCCAATGGTATCT+CGG | 0.482269 | tig0009650:-16223 | Msa1347310:CDS |
| TAACGGGAGAAGACCAAAAC+GGG | 0.483320 | tig0009650:-18973 | Msa1347310:five_prime_UTR |
| TCATAAGCATATTGTGTTTG+CGG | 0.484836 | tig0009650:+14895 | None:intergenic |
| GCACGAGGTCTCTTTGGTTG+AGG | 0.488064 | tig0009650:+14997 | None:intergenic |
| GCTGATTTATGCCGTTGCCT+TGG | 0.490504 | tig0009650:-16188 | Msa1347310:CDS |
| GAACTAGAGGAACACTTTCA+CGG | 0.491662 | tig0009650:-17070 | Msa1347310:CDS |
| TGGACATGCAGGAGTAATTG+AGG | 0.495244 | tig0009650:-15919 | Msa1347310:intron |
| TTGATGAGGAAGAGTTATCA+AGG | 0.496724 | tig0009650:-16244 | Msa1347310:CDS |
| TCAGATTGAAGTTAACGAAC+GGG | 0.499700 | tig0009650:-15163 | Msa1347310:intron |
| GTAGAGAGATGGATGTCTCT+GGG | 0.500705 | tig0009650:-16667 | Msa1347310:CDS |
| CTCTCTCTCTGATGTGAGGA+GGG | 0.501429 | tig0009650:-18778 | Msa1347310:five_prime_UTR |
| CATTTCCAAAGTAGTTTCCA+TGG | 0.501736 | tig0009650:+14791 | None:intergenic |
| TTTAGTATCGAAAGATATCA+AGG | 0.507053 | tig0009650:-16399 | Msa1347310:CDS |
| GAAGATGTGAAACTTTCTCC+TGG | 0.508576 | tig0009650:-16737 | Msa1347310:CDS |
| TTGACATGGATGCTAGCAAC+GGG | 0.508947 | tig0009650:-16328 | Msa1347310:CDS |
| GGAGAAGACCAAAACGGGAA+CGG | 0.514362 | tig0009650:-18968 | Msa1347310:five_prime_UTR |
| CTGCATGGAAGTGTCATGTC+AGG | 0.517999 | tig0009650:-16522 | Msa1347310:CDS |
| TCGTGAAATGTTGAAGAAGC+AGG | 0.518564 | tig0009650:-16969 | Msa1347310:CDS |
| AAATACCTCCTGAATCAGTC+AGG | 0.521376 | tig0009650:+16426 | None:intergenic |
| GTTGGTGCAGGGTACATGTA+AGG | 0.526176 | tig0009650:+14868 | None:intergenic |
| ATTTATATCTTATCCAGAGC+TGG | 0.526183 | tig0009650:-16699 | Msa1347310:CDS |
| GGTAAAACTTTGTAGAGAGA+TGG | 0.527204 | tig0009650:-16678 | Msa1347310:CDS |
| AGAGAGAGAATTGATAGAGA+AGG | 0.527630 | tig0009650:+18801 | None:intergenic |
| AATGTGGAGCGCCGAGGAGA+GGG | 0.528563 | tig0009650:+14830 | None:intergenic |
| CCGGACCTGTATCATGCTGA+TGG | 0.529168 | tig0009650:-16465 | Msa1347310:CDS |
| TTCTTGCTCACCTGTCAAAA+GGG | 0.531130 | tig0009650:-15781 | Msa1347310:CDS |
| CCATCAGCATGATACAGGTC+CGG | 0.538378 | tig0009650:+16465 | None:intergenic |
| TTAGTGTTAGATTCTTTGGA+AGG | 0.539070 | tig0009650:-16551 | Msa1347310:CDS |
| AGATTCAGTTGCTACACTGA+TGG | 0.539537 | tig0009650:-17182 | Msa1347310:CDS |
| TATCGAAAGATATCAAGGAC+AGG | 0.540207 | tig0009650:-16394 | Msa1347310:CDS |
| TGTGGAGCGCCGAGGAGAGG+GGG | 0.547155 | tig0009650:+14832 | None:intergenic |
| TCTCTCTCTCTGATGTGAGG+AGG | 0.547262 | tig0009650:-18779 | Msa1347310:five_prime_UTR |
| CTAACTTATTAGGTCTTCGC+CGG | 0.548484 | tig0009650:-16484 | Msa1347310:CDS |
| TAACTCATCTCCCACTGCAC+AGG | 0.552298 | tig0009650:-15757 | Msa1347310:intron |
| GGCTTGAGAAATCTTTGAAG+AGG | 0.552611 | tig0009650:-17048 | Msa1347310:CDS |
| AACTAGAGGAACACTTTCAC+GGG | 0.554095 | tig0009650:-17069 | Msa1347310:CDS |
| TGGCGACGCCGAGATACCAT+TGG | 0.556801 | tig0009650:+16215 | None:intergenic |
| CTCTTGAAGCCTCTGCAATG+TGG | 0.561570 | tig0009650:+16919 | None:intergenic |
| TAGCAACGGGAATTCCTTGG+AGG | 0.564367 | tig0009650:-16315 | Msa1347310:CDS |
| GGATTATCAGAGAAGATGCC+TGG | 0.564850 | tig0009650:-16167 | Msa1347310:intron |
| GTCATGTCAGGATATTAAGA+AGG | 0.566518 | tig0009650:-16510 | Msa1347310:CDS |
| TAAATGCTCGAGAAAAGCAC+AGG | 0.567504 | tig0009650:-16868 | Msa1347310:CDS |
| CTGTCGTATCTTCGAAGACG+TGG | 0.569615 | tig0009650:+17156 | None:intergenic |
| ACTAGTGAAGATATGTAGCT+TGG | 0.570101 | tig0009650:+14758 | None:intergenic |
| CCAAAGAGACCTCGTGCTAA+CGG | 0.572390 | tig0009650:-14991 | Msa1347310:CDS |
| ATAACGGGAGAAGACCAAAA+CGG | 0.572509 | tig0009650:-18974 | None:intergenic |
| AGCATTTAAAATGGCAAATG+TGG | 0.577117 | tig0009650:+16883 | None:intergenic |
| TGGACAACTCGTTTCATGAG+AGG | 0.579291 | tig0009650:+15069 | None:intergenic |
| GTTATCAAGGCTAATTCCAA+TGG | 0.582639 | tig0009650:-16231 | Msa1347310:CDS |
| AGATATCAAGGACAGGGCAA+AGG | 0.587264 | tig0009650:-16387 | Msa1347310:CDS |
| TTTCTTCCCTTATAGCAGCA+AGG | 0.588328 | tig0009650:+16612 | None:intergenic |
| CAACAACGAACCTGTGCAGT+GGG | 0.592920 | tig0009650:+15747 | None:intergenic |
| GAAGAGAGAGAGTGTGTGTG+TGG | 0.592954 | tig0009650:+18851 | None:intergenic |
| CTGCAAATAAGACTTCAGTA+AGG | 0.596325 | tig0009650:+15815 | None:intergenic |
| ATCAGATTGAAGTTAACGAA+CGG | 0.596930 | tig0009650:-15164 | Msa1347310:intron |
| AGACCTCGTGCTAACGGTGT+GGG | 0.598202 | tig0009650:-14985 | Msa1347310:CDS |
| CCTGTCAGCAACTCTAGCAT+AGG | 0.600312 | tig0009650:+14921 | None:intergenic |
| ACGAGTTGTCCAACTAGAGA+AGG | 0.600355 | tig0009650:-15058 | Msa1347310:CDS |
| CCTATGCTAGAGTTGCTGAC+AGG | 0.601789 | tig0009650:-14921 | Msa1347310:CDS |
| TATAACTTCTCTCATAACCA+TGG | 0.602948 | tig0009650:-14808 | Msa1347310:CDS |
| CATGAAATGGAAAGAACTAG+AGG | 0.606972 | tig0009650:-17083 | Msa1347310:CDS |
| TTGGCCATTGTCTCCAATGG+GGG | 0.608863 | tig0009650:-16827 | Msa1347310:CDS |
| GTTAGCTGAGATATGAGCAG+AGG | 0.610654 | tig0009650:-14737 | Msa1347310:three_prime_UTR |
| GAGACCTCGTGCTAACGGTG+TGG | 0.612459 | tig0009650:-14986 | Msa1347310:CDS |
| ATCGAAAGATATCAAGGACA+GGG | 0.612465 | tig0009650:-16393 | Msa1347310:CDS |
| GCATCTTCTCTGATAATCCA+AGG | 0.614856 | tig0009650:+16171 | None:intergenic |
| TAATGTGGAGCGCCGAGGAG+AGG | 0.618224 | tig0009650:+14829 | None:intergenic |
| CTTGACATGGATGCTAGCAA+CGG | 0.618939 | tig0009650:-16329 | Msa1347310:CDS |
| ACATTAGAAACAGCATCCAT+CGG | 0.621125 | tig0009650:+16776 | None:intergenic |
| TCATGTTAAGAGTAACAGCT+CGG | 0.622402 | tig0009650:+17101 | None:intergenic |
| TTATGAGAGAAGTTATAATG+TGG | 0.627766 | tig0009650:+14814 | None:intergenic |
| TAAATTGGATGCTCTTGACA+TGG | 0.628213 | tig0009650:-16342 | Msa1347310:CDS |
| GTGCAGGGTACATGTAAGGT+CGG | 0.629550 | tig0009650:+14872 | None:intergenic |
| TCAACAACGAACCTGTGCAG+TGG | 0.632086 | tig0009650:+15746 | None:intergenic |
| ATGTGGAGCGCCGAGGAGAG+GGG | 0.632547 | tig0009650:+14831 | None:intergenic |
| AATGATTGTCAGTTGGTGCA+GGG | 0.632680 | tig0009650:+14857 | None:intergenic |
| AGGAGCAAGCCACATTGCAG+AGG | 0.633997 | tig0009650:-16928 | Msa1347310:CDS |
| AGACGTGAAGGAGAAACCGA+TGG | 0.634087 | tig0009650:-16792 | Msa1347310:CDS |
| TCATGGTACATCAGACGTGA+AGG | 0.636518 | tig0009650:-16804 | Msa1347310:CDS |
| GAAGATACGACAGCTGCAGA+AGG | 0.636526 | tig0009650:-17146 | Msa1347310:CDS |
| CGTTTCATGAGAGGATCTAG+AGG | 0.641564 | tig0009650:+15078 | None:intergenic |
| GCTGTTTCTAATGTGACAGA+AGG | 0.646807 | tig0009650:-16767 | Msa1347310:CDS |
| TGCTCGAGAAAAGCACAGGA+AGG | 0.649104 | tig0009650:-16864 | Msa1347310:CDS |
| TCTCTGATAATCCAAGGCAA+CGG | 0.658583 | tig0009650:+16177 | None:intergenic |
| AGTTATAATGTGGAGCGCCG+AGG | 0.659224 | tig0009650:+14824 | None:intergenic |
| TTTGGCCATTGTCTCCAATG+GGG | 0.674659 | tig0009650:-16828 | Msa1347310:CDS |
| GATTTCCTGACTGATTCAGG+AGG | 0.688195 | tig0009650:-16431 | Msa1347310:CDS |
| TATCCCACACCGTTAGCACG+AGG | 0.694652 | tig0009650:+14982 | None:intergenic |
| GAAGGAATGTTAGTGACACG+AGG | 0.728712 | tig0009650:+14955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTTTTTTTATTTTC+TGG | - | tig0009650:15035-15054 | Msa1347310:CDS | 10.0% |
| !! | AATTACAAAACACTAAAAAA+AGG | + | tig0009650:15150-15169 | None:intergenic | 15.0% |
| !! | AGGATTAATAATATACATTT+GGG | + | tig0009650:16186-16205 | None:intergenic | 15.0% |
| !! | TAGGATTAATAATATACATT+TGG | + | tig0009650:16187-16206 | None:intergenic | 15.0% |
| !!! | ATAGAATCAGAATAGAATTT+TGG | + | tig0009650:14948-14967 | None:intergenic | 20.0% |
| !!! | CTATTTTTATTATTGATGAG+TGG | - | tig0009650:15097-15116 | Msa1347310:CDS | 20.0% |
| !! | AAAAATTTCATACAACTCTA+TGG | + | tig0009650:15403-15422 | None:intergenic | 20.0% |
| !!! | ATTTTAAGTTTGTATTAGTG+AGG | - | tig0009650:15476-15495 | Msa1347310:intron | 20.0% |
| !!! | TTTTTTTTATTTTTGAGGGA+AGG | - | tig0009650:15515-15534 | Msa1347310:intron | 20.0% |
| !!! | GATGTGTATAATTTTAGAAA+TGG | - | tig0009650:15868-15887 | Msa1347310:CDS | 20.0% |
| !! | GGATTAATAATATACATTTG+GGG | + | tig0009650:16185-16204 | None:intergenic | 20.0% |
| !! | ATATTATAAGAATACATACC+AGG | + | tig0009650:17359-17378 | None:intergenic | 20.0% |
| !!! | TAATGCTTTGTTTTTCATTT+TGG | - | tig0009650:17566-17585 | Msa1347310:intron | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | - | tig0009650:17859-17878 | Msa1347310:intron | 20.0% |
| !! | GACTAGATATATTAAACAAA+AGG | + | tig0009650:18802-18821 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTCTTGCTGT+CGG | - | tig0009650:14902-14921 | Msa1347310:CDS | 25.0% |
| ! | ATAATTATAAGAGCAATGTG+TGG | + | tig0009650:15002-15021 | None:intergenic | 25.0% |
| ! | AAACACTAAAAAAAGGAACA+GGG | + | tig0009650:15143-15162 | None:intergenic | 25.0% |
| ! | AAAACACTAAAAAAAGGAAC+AGG | + | tig0009650:15144-15163 | None:intergenic | 25.0% |
| !! | TTTTGTAATTGTTGCTCTAA+AGG | - | tig0009650:15160-15179 | Msa1347310:CDS | 25.0% |
| !! | GAAATTAATGCTTGATGATT+TGG | - | tig0009650:15275-15294 | Msa1347310:intron | 25.0% |
| ! | ACAACTCTATGGATAAAAAT+GGG | + | tig0009650:15392-15411 | None:intergenic | 25.0% |
| ! | TACAACTCTATGGATAAAAA+TGG | + | tig0009650:15393-15412 | None:intergenic | 25.0% |
| ! | TACTTTCTTTAAGTACTTCA+TGG | - | tig0009650:15423-15442 | Msa1347310:intron | 25.0% |
| !!! | CATTACTTTTTTTTTTGTGG+TGG | + | tig0009650:15647-15666 | None:intergenic | 25.0% |
| !!! | CTGCATTACTTTTTTTTTTG+TGG | + | tig0009650:15650-15669 | None:intergenic | 25.0% |
| !! | TCAGTTAGTTAGTTTAATCA+GGG | + | tig0009650:15927-15946 | None:intergenic | 25.0% |
| !!! | TTTTAGGGTTTTTGAATTTG+AGG | + | tig0009650:16067-16086 | None:intergenic | 25.0% |
| ! | TGAAACAACTACTTAATTTC+AGG | + | tig0009650:16264-16283 | None:intergenic | 25.0% |
| ! | ATGTTTAGTGTTAGATTCTT+TGG | - | tig0009650:16950-16969 | Msa1347310:CDS | 25.0% |
| !! | TTTAGTATCGAAAGATATCA+AGG | - | tig0009650:17106-17125 | Msa1347310:CDS | 25.0% |
| ! | TTTCTAAATTAAGCAAGCTA+TGG | - | tig0009650:18240-18259 | Msa1347310:intron | 25.0% |
| ! | TTCTAAATTAAGCAAGCTAT+GGG | - | tig0009650:18241-18260 | Msa1347310:intron | 25.0% |
| ! | TTATGGAGGAATATTTAACT+TGG | - | tig0009650:18272-18291 | Msa1347310:intron | 25.0% |
| ! | TTATGAGAGAAGTTATAATG+TGG | + | tig0009650:18694-18713 | None:intergenic | 25.0% |
| ! | TATCAGAATTCAAACATTAG+AGG | + | tig0009650:18942-18961 | None:intergenic | 25.0% |
| !! | ATTGTCTTTGTAGTATGTTT+TGG | - | tig0009650:18961-18980 | Msa1347310:five_prime_UTR | 25.0% |
| GAAGAAGATGAAGAAGAAAA+AGG | + | tig0009650:14679-14698 | None:intergenic | 30.0% | |
| TAGTTTCTTTCAGATCAATC+AGG | - | tig0009650:14800-14819 | Msa1347310:CDS | 30.0% | |
| AACACTAAAAAAAGGAACAG+GGG | + | tig0009650:15142-15161 | None:intergenic | 30.0% | |
| !! | TAATTGTTGCTCTAAAGGTT+TGG | - | tig0009650:15165-15184 | Msa1347310:intron | 30.0% |
| !!! | TGAAGGATTTTTTAGCTACT+AGG | - | tig0009650:15241-15260 | Msa1347310:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | tig0009650:15599-15618 | Msa1347310:intron | 30.0% | |
| ! | CTCAGTTAGTTAGTTTAATC+AGG | + | tig0009650:15928-15947 | None:intergenic | 30.0% |
| TATATACTGTGACAGAAGAT+TGG | - | tig0009650:15980-15999 | Msa1347310:intron | 30.0% | |
| ! | CTAGTTCTTGACTTCAAAAT+AGG | - | tig0009650:16022-16041 | Msa1347310:intron | 30.0% |
| ACCCTAAAATTATACATTGC+CGG | - | tig0009650:16078-16097 | Msa1347310:intron | 30.0% | |
| ATACATTTGGGGAACTTATA+CGG | + | tig0009650:16174-16193 | None:intergenic | 30.0% | |
| TTCACACTCATAATCTGATT+AGG | + | tig0009650:16206-16225 | None:intergenic | 30.0% | |
| GAAGTGTATACTATTAACCA+TGG | - | tig0009650:16223-16242 | Msa1347310:CDS | 30.0% | |
| !! | TACTTAATTTCAGGTTGTGA+AGG | + | tig0009650:16255-16274 | None:intergenic | 30.0% |
| CTGTTACTCTTAACATGAAA+TGG | - | tig0009650:16409-16428 | Msa1347310:CDS | 30.0% | |
| ! | AGCATTTAAAATGGCAAATG+TGG | + | tig0009650:16625-16644 | None:intergenic | 30.0% |
| ! | CTTTTCTCGAGCATTTAAAA+TGG | + | tig0009650:16634-16653 | None:intergenic | 30.0% |
| GAAGGTTTCACAAAAAGATT+TGG | - | tig0009650:16659-16678 | Msa1347310:CDS | 30.0% | |
| AATTCCAAATTTCCATTTCC+AGG | + | tig0009650:16789-16808 | None:intergenic | 30.0% | |
| ATTTATATCTTATCCAGAGC+TGG | - | tig0009650:16806-16825 | Msa1347310:CDS | 30.0% | |
| TTAGTGTTAGATTCTTTGGA+AGG | - | tig0009650:16954-16973 | Msa1347310:CDS | 30.0% | |
| AAGAAGGATGCTAACTTATT+AGG | - | tig0009650:17011-17030 | Msa1347310:CDS | 30.0% | |
| TAGAACAAACAGATGCAAAT+CGG | + | tig0009650:17548-17567 | None:intergenic | 30.0% | |
| ! | TCTTTCTATCGTGTTCTTTT+AGG | - | tig0009650:17790-17809 | Msa1347310:intron | 30.0% |
| !!! | TGTTCTTTTAGGCTTTGTTT+GGG | - | tig0009650:17801-17820 | Msa1347310:intron | 30.0% |
| ATAAAAAATCCCCCTCATTT+GGG | + | tig0009650:18061-18080 | None:intergenic | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | + | tig0009650:18062-18081 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | + | tig0009650:18119-18138 | None:intergenic | 30.0% | |
| ATCAGATTGAAGTTAACGAA+CGG | - | tig0009650:18341-18360 | Msa1347310:intron | 30.0% | |
| TCATAAGCATATTGTGTTTG+CGG | + | tig0009650:18613-18632 | None:intergenic | 30.0% | |
| TATAACTTCTCTCATAACCA+TGG | - | tig0009650:18697-18716 | Msa1347310:intron | 30.0% | |
| GTTCAACATACAACATCTTA+AGG | + | tig0009650:18829-18848 | None:intergenic | 30.0% | |
| AGAGAGAGAATTGATAGAGA+AGG | + | tig0009650:14707-14726 | None:intergenic | 35.0% | |
| TTGTTCTGTTTGATGCATGA+AGG | - | tig0009650:15224-15243 | Msa1347310:intron | 35.0% | |
| !! | AATGCTTGATGATTTGGTGA+AGG | - | tig0009650:15281-15300 | Msa1347310:intron | 35.0% |
| !! | ATGCTTGATGATTTGGTGAA+GGG | - | tig0009650:15282-15301 | Msa1347310:intron | 35.0% |
| TTTAGCAAATGTCCCTCTAT+TGG | - | tig0009650:15358-15377 | Msa1347310:intron | 35.0% | |
| TAATATATGCAAGGTCTGTC+TGG | - | tig0009650:15608-15627 | Msa1347310:intron | 35.0% | |
| AATATATGCAAGGTCTGTCT+GGG | - | tig0009650:15609-15628 | Msa1347310:intron | 35.0% | |
| !!! | ACTTTTTTTTTTGTGGTGGC+CGG | + | tig0009650:15643-15662 | None:intergenic | 35.0% |
| AAGAGTGAATAGAGACACAT+AGG | - | tig0009650:15846-15865 | Msa1347310:CDS | 35.0% | |
| ! | GCCGGCAATGTATAATTTTA+GGG | + | tig0009650:16082-16101 | None:intergenic | 35.0% |
| !! | CTCACGATCTTTTGAAAACA+AGG | + | tig0009650:16104-16123 | None:intergenic | 35.0% |
| !!! | CTTTTTCAGCTTCTTAGCAA+TGG | - | tig0009650:16293-16312 | Msa1347310:CDS | 35.0% |
| TCATGTTAAGAGTAACAGCT+CGG | + | tig0009650:16407-16426 | None:intergenic | 35.0% | |
| CATGAAATGGAAAGAACTAG+AGG | - | tig0009650:16422-16441 | Msa1347310:CDS | 35.0% | |
| ACATTAGAAACAGCATCCAT+CGG | + | tig0009650:16732-16751 | None:intergenic | 35.0% | |
| TTCTCCTGGAAATGGAAATT+TGG | - | tig0009650:16782-16801 | Msa1347310:CDS | 35.0% | |
| GGTAAAACTTTGTAGAGAGA+TGG | - | tig0009650:16827-16846 | Msa1347310:CDS | 35.0% | |
| TTATAGCAGCAAGGTTCTTA+CGG | + | tig0009650:16887-16906 | None:intergenic | 35.0% | |
| TAAGAACCTTGCTGCTATAA+GGG | - | tig0009650:16887-16906 | Msa1347310:CDS | 35.0% | |
| AACACTAAACATGCAGCATT+AGG | + | tig0009650:16942-16961 | None:intergenic | 35.0% | |
| ! | TTTGGAAGGATTTTACTGCA+TGG | - | tig0009650:16968-16987 | Msa1347310:CDS | 35.0% |
| GTCATGTCAGGATATTAAGA+AGG | - | tig0009650:16995-17014 | Msa1347310:CDS | 35.0% | |
| TATCGAAAGATATCAAGGAC+AGG | - | tig0009650:17111-17130 | Msa1347310:CDS | 35.0% | |
| ATCGAAAGATATCAAGGACA+GGG | - | tig0009650:17112-17131 | Msa1347310:CDS | 35.0% | |
| TGAAGAATGGAAGCCTAAAT+TGG | - | tig0009650:17148-17167 | Msa1347310:CDS | 35.0% | |
| !! | ATGTCAAGAGCATCCAATTT+AGG | + | tig0009650:17164-17183 | None:intergenic | 35.0% |
| TAAATTGGATGCTCTTGACA+TGG | - | tig0009650:17163-17182 | Msa1347310:CDS | 35.0% | |
| TTGATGAGGAAGAGTTATCA+AGG | - | tig0009650:17261-17280 | Msa1347310:intron | 35.0% | |
| GTTATCAAGGCTAATTCCAA+TGG | - | tig0009650:17274-17293 | Msa1347310:intron | 35.0% | |
| TTCTGTTTCAATCGTAACCT+TGG | - | tig0009650:17378-17397 | Msa1347310:intron | 35.0% | |
| ! | GTTTTTCATTTTGGACATGC+AGG | - | tig0009650:17575-17594 | Msa1347310:intron | 35.0% |
| TAAGACTTCAGTAAGGAAAC+AGG | + | tig0009650:17686-17705 | None:intergenic | 35.0% | |
| CTGCAAATAAGACTTCAGTA+AGG | + | tig0009650:17693-17712 | None:intergenic | 35.0% | |
| !! | CTTACTGAAGTCTTATTTGC+AGG | - | tig0009650:17691-17710 | Msa1347310:intron | 35.0% |
| !!! | GTGTTCTTTTAGGCTTTGTT+TGG | - | tig0009650:17800-17819 | Msa1347310:intron | 35.0% |
| GAACTCAAAAATTGCATTGG+GGG | + | tig0009650:18037-18056 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGCATTG+GGG | + | tig0009650:18038-18057 | None:intergenic | 35.0% | |
| GGGAACTCAAAAATTGCATT+GGG | + | tig0009650:18039-18058 | None:intergenic | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | + | tig0009650:18060-18079 | None:intergenic | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | + | tig0009650:18116-18135 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | + | tig0009650:18120-18139 | None:intergenic | 35.0% | |
| ATTAAGCAAGCTATGGGTAT+TGG | - | tig0009650:18247-18266 | Msa1347310:intron | 35.0% | |
| ATCTGATACAAGAAGTCACT+AGG | + | tig0009650:18328-18347 | None:intergenic | 35.0% | |
| TCAGATTGAAGTTAACGAAC+GGG | - | tig0009650:18342-18361 | Msa1347310:intron | 35.0% | |
| CATAAGCATATTGTGTTTGC+GGG | + | tig0009650:18612-18631 | None:intergenic | 35.0% | |
| CATAACCATGGAAACTACTT+TGG | - | tig0009650:18709-18728 | Msa1347310:five_prime_UTR | 35.0% | |
| CATTTCCAAAGTAGTTTCCA+TGG | + | tig0009650:18717-18736 | None:intergenic | 35.0% | |
| ! | CATGGAAACTACTTTGGAAA+TGG | - | tig0009650:18715-18734 | Msa1347310:five_prime_UTR | 35.0% |
| ACTAGTGAAGATATGTAGCT+TGG | + | tig0009650:18750-18769 | None:intergenic | 35.0% | |
| GAGGGTTACACTCAGAAAAA+TGG | - | tig0009650:14745-14764 | Msa1347310:exon | 40.0% | |
| !! | TTCTTGCTGTCGGTTTAGAT+CGG | - | tig0009650:14912-14931 | Msa1347310:CDS | 40.0% |
| AACAGACAAGAAACGTAACG+TGG | + | tig0009650:14971-14990 | None:intergenic | 40.0% | |
| AAAAGGAACAGGGGCAAAAT+CGG | + | tig0009650:15133-15152 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | + | tig0009650:15641-15660 | None:intergenic | 40.0% |
| !!! | CTTTTTTTTTTGTGGTGGCC+GGG | + | tig0009650:15642-15661 | None:intergenic | 40.0% |
| ACTAACACCGACACAAACAT+CGG | + | tig0009650:15800-15819 | None:intergenic | 40.0% | |
| ! | GGCCGGCAATGTATAATTTT+AGG | + | tig0009650:16083-16102 | None:intergenic | 40.0% |
| !! | CGATCTTTTGAAAACAAGGC+CGG | + | tig0009650:16100-16119 | None:intergenic | 40.0% |
| AGATTCAGTTGCTACACTGA+TGG | - | tig0009650:16323-16342 | Msa1347310:CDS | 40.0% | |
| GAACTAGAGGAACACTTTCA+CGG | - | tig0009650:16435-16454 | Msa1347310:CDS | 40.0% | |
| AACTAGAGGAACACTTTCAC+GGG | - | tig0009650:16436-16455 | Msa1347310:CDS | 40.0% | |
| ! | GGCTTGAGAAATCTTTGAAG+AGG | - | tig0009650:16457-16476 | Msa1347310:CDS | 40.0% |
| TCGTGAAATGTTGAAGAAGC+AGG | - | tig0009650:16536-16555 | Msa1347310:CDS | 40.0% | |
| ! | TAAATGCTCGAGAAAAGCAC+AGG | - | tig0009650:16637-16656 | Msa1347310:CDS | 40.0% |
| ATTTGGCCATTGTCTCCAAT+GGG | - | tig0009650:16676-16695 | Msa1347310:CDS | 40.0% | |
| !! | GCTGTTTCTAATGTGACAGA+AGG | - | tig0009650:16738-16757 | Msa1347310:CDS | 40.0% |
| GAAGATGTGAAACTTTCTCC+TGG | - | tig0009650:16768-16787 | Msa1347310:CDS | 40.0% | |
| GTGAAACTTTCTCCTGGAAA+TGG | - | tig0009650:16774-16793 | Msa1347310:CDS | 40.0% | |
| ! | CTACAAAGTTTTACCAGCTC+TGG | + | tig0009650:16822-16841 | None:intergenic | 40.0% |
| GTAAGAACCTTGCTGCTATA+AGG | - | tig0009650:16886-16905 | Msa1347310:CDS | 40.0% | |
| TTTCTTCCCTTATAGCAGCA+AGG | + | tig0009650:16896-16915 | None:intergenic | 40.0% | |
| ! | GGAGAAGCTTTTAATGCATG+AGG | + | tig0009650:16921-16940 | None:intergenic | 40.0% |
| CTAACTTATTAGGTCTTCGC+CGG | - | tig0009650:17021-17040 | Msa1347310:CDS | 40.0% | |
| ACATTCCATCAGCATGATAC+AGG | + | tig0009650:17048-17067 | None:intergenic | 40.0% | |
| ! | AGTGATTTCCTGACTGATTC+AGG | - | tig0009650:17071-17090 | Msa1347310:CDS | 40.0% |
| AAATACCTCCTGAATCAGTC+AGG | + | tig0009650:17082-17101 | None:intergenic | 40.0% | |
| !!! | TATTGCGTCTGGTTTTGATG+AGG | - | tig0009650:17247-17266 | Msa1347310:intron | 40.0% |
| GGCTAATTCCAATGGTATCT+CGG | - | tig0009650:17282-17301 | Msa1347310:intron | 40.0% | |
| AACGGCATAAATCAGCAGTT+TGG | + | tig0009650:17313-17332 | None:intergenic | 40.0% | |
| TCTCTGATAATCCAAGGCAA+CGG | + | tig0009650:17331-17350 | None:intergenic | 40.0% | |
| GCATCTTCTCTGATAATCCA+AGG | + | tig0009650:17337-17356 | None:intergenic | 40.0% | |
| ACTGTTGATCAATATCGCCA+AGG | + | tig0009650:17398-17417 | None:intergenic | 40.0% | |
| ATTGATCAACAGTCATGCCT+TGG | - | tig0009650:17405-17424 | Msa1347310:intron | 40.0% | |
| ACTGTTGATCAATATCGCCA+AGG | + | tig0009650:17398-17417 | None:intergenic | 40.0% | |
| ! | TGCAGGAGTAATTGAGGTTT+TGG | - | tig0009650:17592-17611 | Msa1347310:intron | 40.0% |
| GCAAATTGACGCTGTTAACT+TGG | - | tig0009650:17628-17647 | Msa1347310:intron | 40.0% | |
| ATTCTTGCTCACCTGTCAAA+AGG | - | tig0009650:17723-17742 | Msa1347310:intron | 40.0% | |
| TTCTTGCTCACCTGTCAAAA+GGG | - | tig0009650:17724-17743 | Msa1347310:intron | 40.0% | |
| ! | GATGAGTTAACCCTTTTGAC+AGG | + | tig0009650:17737-17756 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | tig0009650:17808-17827 | Msa1347310:intron | 40.0% |
| ! | CTTTGTTTGGGAGTTTGGAA+GGG | - | tig0009650:17813-17832 | Msa1347310:intron | 40.0% |
| TCAAAAATTGCATTGGGGGA+GGG | + | tig0009650:18033-18052 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGCAT+TGG | + | tig0009650:18040-18059 | None:intergenic | 40.0% | |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | tig0009650:18046-18065 | Msa1347310:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | - | tig0009650:18047-18066 | Msa1347310:intron | 40.0% |
| AAAAAATCCCCCTCATTTGG+GGG | + | tig0009650:18059-18078 | None:intergenic | 40.0% | |
| !!! | GAGGGTTTTGGAAAAAAGGA+AGG | + | tig0009650:18148-18167 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | tig0009650:18185-18204 | None:intergenic | 40.0% |
| AAACTCCCAAACAAAGCCTT+AGG | - | tig0009650:18184-18203 | Msa1347310:intron | 40.0% | |
| AACTCCCAAACAAAGCCTTA+GGG | - | tig0009650:18185-18204 | Msa1347310:intron | 40.0% | |
| !! | CATACCCTAAGGCTTTGTTT+GGG | + | tig0009650:18192-18211 | None:intergenic | 40.0% |
| !! | ACATACCCTAAGGCTTTGTT+TGG | + | tig0009650:18193-18212 | None:intergenic | 40.0% |
| ACAAAGCCTTAGGGTATGTT+TGG | - | tig0009650:18194-18213 | Msa1347310:intron | 40.0% | |
| CAAAGCCTTAGGGTATGTTT+GGG | - | tig0009650:18195-18214 | Msa1347310:intron | 40.0% | |
| !! | AGCTATGGGTATTGGTCTTA+TGG | - | tig0009650:18255-18274 | Msa1347310:intron | 40.0% |
| !! | TATGGGTATTGGTCTTATGG+AGG | - | tig0009650:18258-18277 | Msa1347310:intron | 40.0% |
| !! | GCATAGGAAGTTTTGTCAGA+AGG | + | tig0009650:18571-18590 | None:intergenic | 40.0% |
| ! | AATGATTGTCAGTTGGTGCA+GGG | + | tig0009650:18651-18670 | None:intergenic | 40.0% |
| !! | TTCAAGTTCCGTTCCCGTTT+TGG | + | tig0009650:14548-14567 | None:intergenic | 45.0% |
| TGGGAGAAGCTACCAATAGA+GGG | + | tig0009650:15373-15392 | None:intergenic | 45.0% | |
| ATGGGAGAAGCTACCAATAG+AGG | + | tig0009650:15374-15393 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | tig0009650:15577-15596 | Msa1347310:intron | 45.0% |
| TTTCAGTGTCGCATCAGTGT+CGG | + | tig0009650:15711-15730 | None:intergenic | 45.0% | |
| !!! | GGAAGAAGCTGTTTTTGCCA+AGG | - | tig0009650:16557-16576 | Msa1347310:CDS | 45.0% |
| GATTTGGCCATTGTCTCCAA+TGG | - | tig0009650:16675-16694 | Msa1347310:CDS | 45.0% | |
| TTTGGCCATTGTCTCCAATG+GGG | - | tig0009650:16677-16696 | Msa1347310:CDS | 45.0% | |
| TCATGGTACATCAGACGTGA+AGG | - | tig0009650:16701-16720 | Msa1347310:CDS | 45.0% | |
| TGTAGAGAGATGGATGTCTC+TGG | - | tig0009650:16837-16856 | Msa1347310:CDS | 45.0% | |
| GTAGAGAGATGGATGTCTCT+GGG | - | tig0009650:16838-16857 | Msa1347310:CDS | 45.0% | |
| ! | GATTTCCTGACTGATTCAGG+AGG | - | tig0009650:17074-17093 | Msa1347310:CDS | 45.0% |
| AGATATCAAGGACAGGGCAA+AGG | - | tig0009650:17118-17137 | Msa1347310:CDS | 45.0% | |
| CAAAGGCAGTTGCTGAAGAA+TGG | - | tig0009650:17135-17154 | Msa1347310:CDS | 45.0% | |
| CTTGACATGGATGCTAGCAA+CGG | - | tig0009650:17176-17195 | Msa1347310:CDS | 45.0% | |
| TTGACATGGATGCTAGCAAC+GGG | - | tig0009650:17177-17196 | Msa1347310:CDS | 45.0% | |
| TAAAAACGCATGAGCCTCCA+AGG | + | tig0009650:17207-17226 | None:intergenic | 45.0% | |
| ACCAGACGCAATACGAAAAC+TGG | + | tig0009650:17240-17259 | None:intergenic | 45.0% | |
| GGATTATCAGAGAAGATGCC+TGG | - | tig0009650:17338-17357 | Msa1347310:intron | 45.0% | |
| TGGACATGCAGGAGTAATTG+AGG | - | tig0009650:17586-17605 | Msa1347310:intron | 45.0% | |
| !! | ATTGAGGTTTTGGCGAACAG+TGG | - | tig0009650:17602-17621 | Msa1347310:intron | 45.0% |
| !! | TTGAGGTTTTGGCGAACAGT+GGG | - | tig0009650:17603-17622 | Msa1347310:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+AGG | - | tig0009650:17812-17831 | Msa1347310:intron | 45.0% |
| TTTGGGAGTTTGGAAGGGAA+GGG | - | tig0009650:17818-17837 | Msa1347310:intron | 45.0% | |
| CTCAAAAATTGCATTGGGGG+AGG | + | tig0009650:18034-18053 | None:intergenic | 45.0% | |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | - | tig0009650:18048-18067 | Msa1347310:intron | 45.0% |
| TAGAAGACATTGGGAGGAGA+GGG | + | tig0009650:18110-18129 | None:intergenic | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | + | tig0009650:18111-18130 | None:intergenic | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | + | tig0009650:18139-18158 | None:intergenic | 45.0% | |
| !!! | AGGGGAGGGTTTTGGAAAAA+AGG | + | tig0009650:18152-18171 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | tig0009650:18180-18199 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | tig0009650:17812-17831 | None:intergenic | 45.0% |
| CCTTAGGGTATGTTTGGGAA+GGG | - | tig0009650:18200-18219 | Msa1347310:intron | 45.0% | |
| CTTAGGGTATGTTTGGGAAG+GGG | - | tig0009650:18201-18220 | Msa1347310:intron | 45.0% | |
| CGTTTCATGAGAGGATCTAG+AGG | + | tig0009650:18430-18449 | None:intergenic | 45.0% | |
| TGGACAACTCGTTTCATGAG+AGG | + | tig0009650:18439-18458 | None:intergenic | 45.0% | |
| ACGAGTTGTCCAACTAGAGA+AGG | - | tig0009650:18447-18466 | Msa1347310:intron | 45.0% | |
| AGGCGAAAGCTGACAAAAAG+AGG | - | tig0009650:18467-18486 | Msa1347310:intron | 45.0% | |
| GGCGAAAGCTGACAAAAAGA+GGG | - | tig0009650:18468-18487 | Msa1347310:intron | 45.0% | |
| GAAGGAATGTTAGTGACACG+AGG | + | tig0009650:18553-18572 | None:intergenic | 45.0% | |
| ! | CAATGATTGTCAGTTGGTGC+AGG | + | tig0009650:18652-18671 | None:intergenic | 45.0% |
| GTTAGCTGAGATATGAGCAG+AGG | - | tig0009650:18768-18787 | Msa1347310:five_prime_UTR | 45.0% | |
| !!! | ATTTATTTTTTTTATTTTTG+AGG | - | tig0009650:15510-15529 | Msa1347310:intron | 5.0% |
| !!! | TTTATTTTTTTTATTTTTGA+GGG | - | tig0009650:15511-15530 | Msa1347310:intron | 5.0% |
| !!! | TTTATTTTTTAAATTACTAT+CGG | - | tig0009650:15752-15771 | Msa1347310:intron | 5.0% |
| GGAGAAGACCAAAACGGGAA+CGG | - | tig0009650:14537-14556 | Msa1347310:three_prime_UTR | 50.0% | |
| ! | GAAGAGAGAGAGTGTGTGTG+TGG | + | tig0009650:14657-14676 | None:intergenic | 50.0% |
| CTCTCTCTCTCTCTGATGTG+AGG | - | tig0009650:14723-14742 | Msa1347310:three_prime_UTR | 50.0% | |
| TCTCTCTCTCTGATGTGAGG+AGG | - | tig0009650:14726-14745 | Msa1347310:three_prime_UTR | 50.0% | |
| CTCTCTCTCTGATGTGAGGA+GGG | - | tig0009650:14727-14746 | Msa1347310:three_prime_UTR | 50.0% | |
| GTCGTGTCCGATGTTTGTGT+CGG | - | tig0009650:15790-15809 | Msa1347310:CDS | 50.0% | |
| ! | GGTTGTGAAGGCATGAACCA+TGG | + | tig0009650:16243-16262 | None:intergenic | 50.0% |
| CTGTCGTATCTTCGAAGACG+TGG | + | tig0009650:16352-16371 | None:intergenic | 50.0% | |
| GAAGATACGACAGCTGCAGA+AGG | - | tig0009650:16359-16378 | Msa1347310:CDS | 50.0% | |
| CTCTTGAAGCCTCTGCAATG+TGG | + | tig0009650:16589-16608 | None:intergenic | 50.0% | |
| ! | TGCTCGAGAAAAGCACAGGA+AGG | - | tig0009650:16641-16660 | Msa1347310:CDS | 50.0% |
| TTGGCCATTGTCTCCAATGG+GGG | - | tig0009650:16678-16697 | Msa1347310:CDS | 50.0% | |
| ATGACCCCCATTGGAGACAA+TGG | + | tig0009650:16685-16704 | None:intergenic | 50.0% | |
| ATTGTCTCCAATGGGGGTCA+TGG | - | tig0009650:16684-16703 | Msa1347310:CDS | 50.0% | |
| TGATGTACCATGACCCCCAT+TGG | + | tig0009650:16694-16713 | None:intergenic | 50.0% | |
| AGACGTGAAGGAGAAACCGA+TGG | - | tig0009650:16713-16732 | Msa1347310:CDS | 50.0% | |
| !! | CTGCATGGAAGTGTCATGTC+AGG | - | tig0009650:16983-17002 | Msa1347310:CDS | 50.0% |
| CCATCAGCATGATACAGGTC+CGG | + | tig0009650:17043-17062 | None:intergenic | 50.0% | |
| TGCTAGCAACGGGAATTCCT+TGG | - | tig0009650:17187-17206 | Msa1347310:CDS | 50.0% | |
| TAGCAACGGGAATTCCTTGG+AGG | - | tig0009650:17190-17209 | Msa1347310:CDS | 50.0% | |
| ! | GCCAGTTTTCGTATTGCGTC+TGG | - | tig0009650:17236-17255 | Msa1347310:intron | 50.0% |
| ! | GCTGATTTATGCCGTTGCCT+TGG | - | tig0009650:17317-17336 | Msa1347310:intron | 50.0% |
| TAACTCATCTCCCACTGCAC+AGG | - | tig0009650:17748-17767 | Msa1347310:intron | 50.0% | |
| CAACAACGAACCTGTGCAGT+GGG | + | tig0009650:17761-17780 | None:intergenic | 50.0% | |
| TCAACAACGAACCTGTGCAG+TGG | + | tig0009650:17762-17781 | None:intergenic | 50.0% | |
| GTTTGGGAGTTTGGAAGGGA+AGG | - | tig0009650:17817-17836 | Msa1347310:intron | 50.0% | |
| ! | TTGCATTGGGGGAGGGTTTT+GGG | + | tig0009650:18026-18045 | None:intergenic | 50.0% |
| ! | ATTGCATTGGGGGAGGGTTT+TGG | + | tig0009650:18027-18046 | None:intergenic | 50.0% |
| TTGAGTTCCCCCAAATGAGG+GGG | - | tig0009650:18049-18068 | Msa1347310:intron | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | tig0009650:17811-17830 | None:intergenic | 50.0% |
| GCCTTAGGGTATGTTTGGGA+AGG | - | tig0009650:18199-18218 | Msa1347310:intron | 50.0% | |
| CCCTTCCCAAACATACCCTA+AGG | + | tig0009650:18203-18222 | None:intergenic | 50.0% | |
| CAGCTTTCGCCTTCTCTAGT+TGG | + | tig0009650:18459-18478 | None:intergenic | 50.0% | |
| CCAAAGAGACCTCGTGCTAA+CGG | - | tig0009650:18514-18533 | Msa1347310:intron | 50.0% | |
| CCTGTCAGCAACTCTAGCAT+AGG | + | tig0009650:18587-18606 | None:intergenic | 50.0% | |
| CCTATGCTAGAGTTGCTGAC+AGG | - | tig0009650:18584-18603 | Msa1347310:intron | 50.0% | |
| GTGCAGGGTACATGTAAGGT+CGG | + | tig0009650:18636-18655 | None:intergenic | 50.0% | |
| GTTGGTGCAGGGTACATGTA+AGG | + | tig0009650:18640-18659 | None:intergenic | 50.0% | |
| GGGGGACAATGATTGTCAGT+TGG | + | tig0009650:18658-18677 | None:intergenic | 50.0% | |
| AATCATTGTCCCCCTCTCCT+CGG | - | tig0009650:18664-18683 | Msa1347310:intron | 50.0% | |
| !! | AGTTATAATGTGGAGCGCCG+AGG | + | tig0009650:18684-18703 | None:intergenic | 50.0% |
| CCAACTGAGCTAAGCTCACG+AGG | + | tig0009650:15575-15594 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | tig0009650:15572-15591 | Msa1347310:intron | 55.0% | |
| GTCTGTCTGGGTTCAAACCC+CGG | - | tig0009650:15621-15640 | Msa1347310:intron | 55.0% | |
| !! | CTGCAATGTGGCTTGCTCCT+TGG | + | tig0009650:16577-16596 | None:intergenic | 55.0% |
| AGGAGCAAGCCACATTGCAG+AGG | - | tig0009650:16577-16596 | Msa1347310:CDS | 55.0% | |
| CCGGACCTGTATCATGCTGA+TGG | - | tig0009650:17040-17059 | Msa1347310:CDS | 55.0% | |
| !! | AGGTTTTGGCGAACAGTGGG+AGG | - | tig0009650:17606-17625 | Msa1347310:intron | 55.0% |
| GGAGTTTGGAAGGGAAGGGA+GGG | - | tig0009650:17822-17841 | Msa1347310:intron | 55.0% | |
| GAGTTTGGAAGGGAAGGGAG+GGG | - | tig0009650:17823-17842 | Msa1347310:intron | 55.0% | |
| !!! | GGGTTTTGGGGGGTTATGGA+GGG | + | tig0009650:18013-18032 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTATGG+AGG | + | tig0009650:18014-18033 | None:intergenic | 55.0% |
| ! | TGCATTGGGGGAGGGTTTTG+GGG | + | tig0009650:18025-18044 | None:intergenic | 55.0% |
| ACATTGGGAGGAGAGGGCTT+TGG | + | tig0009650:18104-18123 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | tig0009650:18175-18194 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | tig0009650:18176-18195 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | tig0009650:18177-18196 | None:intergenic | 55.0% | |
| GCACGAGGTCTCTTTGGTTG+AGG | + | tig0009650:18511-18530 | None:intergenic | 55.0% | |
| CCGTTAGCACGAGGTCTCTT+TGG | + | tig0009650:18517-18536 | None:intergenic | 55.0% | |
| AGACCTCGTGCTAACGGTGT+GGG | - | tig0009650:18520-18539 | Msa1347310:intron | 55.0% | |
| TATCCCACACCGTTAGCACG+AGG | + | tig0009650:18526-18545 | None:intergenic | 55.0% | |
| CGTGCTAACGGTGTGGGATA+TGG | - | tig0009650:18526-18545 | Msa1347310:intron | 55.0% | |
| AGCTCACGAGGACGCTGCAT+AGG | + | tig0009650:15563-15582 | None:intergenic | 60.0% | |
| TGGCGACGCCGAGATACCAT+TGG | + | tig0009650:17293-17312 | None:intergenic | 60.0% | |
| GGGAGTTTGGAAGGGAAGGG+AGG | - | tig0009650:17821-17840 | Msa1347310:intron | 60.0% | |
| TTTGGAAGGGAAGGGAGGGG+AGG | - | tig0009650:17826-17845 | Msa1347310:intron | 60.0% | |
| TTGGAAGGGAAGGGAGGGGA+GGG | - | tig0009650:17827-17846 | Msa1347310:intron | 60.0% | |
| !!! | GGGAGGGTTTTGGGGGGTTA+TGG | + | tig0009650:18017-18036 | None:intergenic | 60.0% |
| !!! | CATTGGGGGAGGGTTTTGGG+GGG | + | tig0009650:18023-18042 | None:intergenic | 60.0% |
| !! | GCATTGGGGGAGGGTTTTGG+GGG | + | tig0009650:18024-18043 | None:intergenic | 60.0% |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | + | tig0009650:18101-18120 | None:intergenic | 60.0% |
| GAGACCTCGTGCTAACGGTG+TGG | - | tig0009650:18519-18538 | Msa1347310:intron | 60.0% | |
| !! | AATGTGGAGCGCCGAGGAGA+GGG | + | tig0009650:18678-18697 | None:intergenic | 60.0% |
| !! | TAATGTGGAGCGCCGAGGAG+AGG | + | tig0009650:18679-18698 | None:intergenic | 60.0% |
| GGAAGGGAGGGGAGGGCTTT+GGG | - | tig0009650:17834-17853 | Msa1347310:intron | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | - | tig0009650:17835-17854 | Msa1347310:intron | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | - | tig0009650:17836-17855 | Msa1347310:intron | 65.0% |
| GAGTTTGGAGGGGAGGGGAG+GGG | + | tig0009650:18170-18189 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | tig0009650:18171-18190 | None:intergenic | 65.0% | |
| !! | ATGTGGAGCGCCGAGGAGAG+GGG | + | tig0009650:18677-18696 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | tig0009650:17833-17852 | Msa1347310:intron | 70.0% | |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | - | tig0009650:17837-17856 | Msa1347310:intron | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | - | tig0009650:17841-17860 | Msa1347310:intron | 70.0% |
| ! | GGGAGGGGAGGGGAGGGTTT+TGG | + | tig0009650:18160-18179 | None:intergenic | 70.0% |
| TTGGAGGGGAGGGGAGGGGA+GGG | + | tig0009650:18166-18185 | None:intergenic | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | + | tig0009650:18167-18186 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | tig0009650:18172-18191 | None:intergenic | 70.0% | |
| !! | TGTGGAGCGCCGAGGAGAGG+GGG | + | tig0009650:18676-18695 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009650 | gene | 14535 | 18992 | 14535 | ID=Msa1347310;Name=Msa1347310 |
| tig0009650 | mRNA | 14535 | 18992 | 14535 | ID=Msa1347310-mRNA-1;Parent=Msa1347310;Name=Msa1347310-mRNA-1;_AED=0.12;_eAED=0.12;_QI=297|1|1|1|1|0.75|4|224|547 |
| tig0009650 | exon | 14535 | 15181 | 14535 | ID=Msa1347310-mRNA-1:exon:5855;Parent=Msa1347310-mRNA-1 |
| tig0009650 | exon | 15758 | 15930 | 15758 | ID=Msa1347310-mRNA-1:exon:5854;Parent=Msa1347310-mRNA-1 |
| tig0009650 | exon | 16168 | 17225 | 16168 | ID=Msa1347310-mRNA-1:exon:5853;Parent=Msa1347310-mRNA-1 |
| tig0009650 | exon | 18706 | 18992 | 18706 | ID=Msa1347310-mRNA-1:exon:5852;Parent=Msa1347310-mRNA-1 |
| tig0009650 | five_prime_UTR | 18706 | 18992 | 18706 | ID=Msa1347310-mRNA-1:five_prime_utr;Parent=Msa1347310-mRNA-1 |
| tig0009650 | five_prime_UTR | 17216 | 17225 | 17216 | ID=Msa1347310-mRNA-1:five_prime_utr;Parent=Msa1347310-mRNA-1 |
| tig0009650 | CDS | 16168 | 17215 | 16168 | ID=Msa1347310-mRNA-1:cds;Parent=Msa1347310-mRNA-1 |
| tig0009650 | CDS | 15758 | 15930 | 15758 | ID=Msa1347310-mRNA-1:cds;Parent=Msa1347310-mRNA-1 |
| tig0009650 | CDS | 14759 | 15181 | 14759 | ID=Msa1347310-mRNA-1:cds;Parent=Msa1347310-mRNA-1 |
| tig0009650 | three_prime_UTR | 14535 | 14758 | 14535 | ID=Msa1347310-mRNA-1:three_prime_utr;Parent=Msa1347310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
