AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0785430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785430 MtrunA17_Chr5g0436041 100.000 327 0 0 1 327 1 327 0.0 671
Msa0785430 MtrunA17_Chr7g0240341 70.625 320 87 3 7 323 1 316 4.30e-162 454
Msa0785430 MtrunA17_Chr7g0240341 28.571 203 121 6 33 227 133 319 1.97e-13 70.1
Msa0785430 MtrunA17_Chr5g0396801 38.318 321 170 7 22 321 25 338 6.28e-63 203
Msa0785430 MtrunA17_Chr8g0347451 35.276 326 187 6 16 321 32 353 1.01e-60 198
Msa0785430 MtrunA17_Chr6g0488081 33.333 303 174 5 33 321 18 306 1.28e-48 165
Msa0785430 MtrunA17_Chr6g0488081 31.472 197 119 5 140 323 18 211 7.24e-19 85.5
Msa0785430 MtrunA17_Chr6g0488081 28.070 228 139 7 16 229 97 313 7.54e-17 79.7
Msa0785430 MtrunA17_Chr3g0135861 33.228 316 168 8 31 321 32 329 7.95e-48 164
Msa0785430 MtrunA17_Chr3g0135861 30.841 214 129 3 129 323 19 232 7.49e-24 100
Msa0785430 MtrunA17_Chr4g0067231 31.325 332 196 9 22 325 2 329 8.47e-45 155
Msa0785430 MtrunA17_Chr3g0131501 33.447 293 173 9 34 321 205 480 3.26e-44 157
Msa0785430 MtrunA17_Chr3g0131501 29.958 237 141 7 92 318 157 378 4.67e-23 99.4
Msa0785430 MtrunA17_Chr3g0131501 32.500 200 116 5 27 220 292 478 1.07e-19 89.4
Msa0785430 MtrunA17_Chr7g0242311 33.096 281 164 7 45 322 98 357 4.59e-43 152
Msa0785430 MtrunA17_Chr7g0242311 28.492 179 110 6 153 323 99 267 4.51e-11 63.2
Msa0785430 MtrunA17_Chr7g0252401 33.557 298 163 9 34 321 207 479 1.12e-42 153
Msa0785430 MtrunA17_Chr7g0252401 32.323 198 114 5 27 220 296 477 9.00e-23 98.6
Msa0785430 MtrunA17_Chr7g0252401 33.152 184 111 4 140 318 206 382 8.16e-22 95.9
Msa0785430 MtrunA17_Chr3g0137941 32.803 314 186 9 12 323 105 395 4.48e-42 150
Msa0785430 MtrunA17_Chr3g0137941 29.224 219 137 6 15 229 196 400 8.72e-22 95.1
Msa0785430 MtrunA17_Chr3g0137941 29.412 187 113 5 144 324 125 298 3.55e-17 81.6
Msa0785430 MtrunA17_Chr2g0296061 30.915 317 189 9 36 326 17 329 1.29e-41 147
Msa0785430 MtrunA17_Chr2g0296061 28.641 206 124 5 35 225 129 326 8.02e-17 80.1
Msa0785430 MtrunA17_Chr1g0149111 33.220 295 175 9 30 321 135 410 2.70e-41 148
Msa0785430 MtrunA17_Chr1g0149111 29.412 187 121 4 140 324 138 315 1.05e-19 89.4
Msa0785430 MtrunA17_Chr1g0149111 28.708 209 131 6 15 219 213 407 7.09e-19 86.7
Msa0785430 MtrunA17_Chr8g0385571 32.423 293 176 7 34 321 227 502 9.77e-41 149
Msa0785430 MtrunA17_Chr8g0385571 34.239 184 111 5 140 320 226 402 3.46e-22 97.1
Msa0785430 MtrunA17_Chr8g0385571 33.000 200 115 6 27 220 314 500 6.15e-21 93.2
Msa0785430 MtrunA17_Chr4g0006851 33.692 279 165 7 45 322 100 359 2.41e-40 145
Msa0785430 MtrunA17_Chr4g0006851 27.143 210 128 7 26 232 181 368 1.10e-13 71.2
Msa0785430 MtrunA17_Chr4g0006851 30.168 179 107 5 153 323 101 269 9.23e-13 68.6
Msa0785430 MtrunA17_Chr4g0063561 30.847 295 186 5 30 323 119 396 2.27e-39 143
Msa0785430 MtrunA17_Chr4g0063561 29.302 215 131 7 19 226 198 398 2.83e-19 87.8
Msa0785430 MtrunA17_Chr3g0115801 30.476 315 175 7 29 321 111 403 4.25e-34 129
Msa0785430 MtrunA17_Chr3g0135801 30.068 296 192 7 33 320 33 321 2.85e-33 125
Msa0785430 MtrunA17_Chr3g0135801 24.771 218 141 6 125 323 14 227 1.11e-12 67.8
Msa0785430 MtrunA17_Chr8g0382201 27.707 314 187 6 28 321 189 482 1.94e-29 117
Msa0785430 MtrunA17_Chr7g0269701 30.640 297 181 9 36 321 24 306 6.60e-29 113
Msa0785430 MtrunA17_Chr7g0269701 35.567 194 115 6 138 323 17 208 7.36e-20 88.6
Msa0785430 MtrunA17_Chr7g0269701 31.351 185 116 6 48 229 137 313 1.65e-15 76.3
Msa0785430 MtrunA17_Chr4g0000261 25.000 304 202 6 31 321 63 353 3.51e-27 109
Msa0785430 MtrunA17_Chr5g0423111 32.566 304 180 10 29 321 16 305 3.03e-26 106
Msa0785430 MtrunA17_Chr5g0423111 34.118 170 107 4 157 323 37 204 2.68e-17 81.6
Msa0785430 MtrunA17_Chr6g0488341 28.099 242 156 4 81 321 7 231 6.10e-26 103
Msa0785430 MtrunA17_Chr3g0088301 26.144 306 209 7 24 321 83 379 2.10e-25 105
Msa0785430 MtrunA17_Chr1g0195101 29.310 290 182 8 46 325 31 307 9.93e-25 102
Msa0785430 MtrunA17_Chr1g0195101 30.481 187 115 5 48 229 134 310 1.13e-16 79.3
Msa0785430 MtrunA17_Chr8g0393031 24.561 285 199 6 33 309 17 293 1.19e-24 101
Msa0785430 MtrunA17_Chr8g0393031 24.870 193 133 3 141 321 18 210 4.55e-11 62.8
Msa0785430 MtrunA17_Chr8g0352031 25.733 307 210 7 24 321 58 355 2.40e-24 101
Msa0785430 MtrunA17_Chr6g0463041 27.419 248 133 4 112 321 2 240 2.42e-24 99.4
Msa0785430 MtrunA17_Chr6g0463041 27.273 176 113 5 58 229 83 247 3.22e-12 65.5
Msa0785430 MtrunA17_Chr4g0040341 26.774 310 207 8 23 321 61 361 1.06e-23 100
Msa0785430 MtrunA17_Chr2g0328891 27.097 310 206 8 23 321 52 352 1.16e-23 99.8
Msa0785430 MtrunA17_Chr8g0386871 27.425 299 197 7 24 322 310 588 1.73e-23 100
Msa0785430 MtrunA17_Chr4g0028531 26.207 290 182 10 35 311 23 293 2.06e-21 92.8
Msa0785430 MtrunA17_Chr4g0028531 32.000 200 122 6 27 218 106 299 2.95e-13 69.3
Msa0785430 MtrunA17_Chr5g0431531 26.351 296 194 9 34 323 39 316 3.40e-21 92.4
Msa0785430 MtrunA17_Chr5g0431531 30.811 185 119 3 142 325 40 216 1.26e-19 87.8
Msa0785430 MtrunA17_Chr5g0431531 33.537 164 100 3 75 233 167 326 1.79e-14 73.2
Msa0785430 MtrunA17_Chr1g0196921 23.203 306 205 5 26 318 6 294 6.26e-21 91.3
Msa0785430 MtrunA17_Chr7g0275411 28.736 261 160 8 81 323 85 337 9.83e-21 91.3
Msa0785430 MtrunA17_Chr8g0372531 30.279 251 150 7 86 321 65 305 4.28e-19 86.3
Msa0785430 MtrunA17_Chr8g0372531 32.571 175 112 3 156 326 29 201 5.91e-19 85.9
Msa0785430 MtrunA17_Chr8g0372531 26.923 208 133 7 33 228 112 312 6.33e-12 65.5
Msa0785430 MtrunA17_Chr6g0463351 26.950 282 179 6 47 321 80 341 9.37e-19 85.9
Msa0785430 MtrunA17_Chr3g0126331 26.056 284 180 5 62 321 110 387 1.25e-18 85.9
Msa0785430 MtrunA17_Chr8g0366791 25.243 309 203 7 28 321 2 297 2.81e-18 83.6
Msa0785430 MtrunA17_Chr8g0366791 32.178 202 122 5 132 322 4 201 3.19e-18 83.6
Msa0785430 MtrunA17_Chr5g0411411 28.713 202 129 5 132 322 4 201 4.58e-18 83.2
Msa0785430 MtrunA17_Chr5g0411411 24.092 303 203 7 33 321 8 297 7.24e-15 73.9
Msa0785430 MtrunA17_Chr1g0201361 24.828 290 182 6 35 323 52 306 6.76e-18 82.8
Msa0785430 MtrunA17_Chr1g0201361 29.592 196 120 4 25 219 123 301 2.56e-16 78.2
Msa0785430 MtrunA17_Chr1g0201361 27.189 217 115 7 114 319 23 207 3.09e-12 66.2
Msa0785430 MtrunA17_Chr8g0383321 27.974 311 179 12 19 323 36 307 3.06e-17 81.3
Msa0785430 MtrunA17_Chr8g0383321 28.713 202 128 4 25 226 124 309 4.65e-16 77.8
Msa0785430 MtrunA17_Chr4g0004571 31.720 186 117 5 140 321 15 194 6.14e-17 80.1
Msa0785430 MtrunA17_Chr4g0004571 28.365 208 137 4 21 227 101 297 2.31e-16 78.2
Msa0785430 MtrunA17_Chr4g0004571 25.430 291 190 9 33 315 15 286 1.27e-13 70.5
Msa0785430 MtrunA17_Chr3g0086811 24.611 321 198 8 33 323 27 333 8.62e-17 80.1
Msa0785430 MtrunA17_Chr3g0086811 24.091 220 144 3 122 318 6 225 4.08e-12 66.2
Msa0785430 MtrunA17_Chr3g0133111 24.390 328 195 13 31 323 3 312 3.20e-16 78.2
Msa0785430 MtrunA17_Chr3g0133111 22.222 216 153 3 14 221 101 309 1.31e-11 64.7
Msa0785430 MtrunA17_Chr6g0455381 23.552 259 171 5 82 323 60 308 6.38e-16 77.4
Msa0785430 MtrunA17_Chr6g0455381 30.168 179 109 9 124 294 4 174 6.93e-13 68.6
Msa0785430 MtrunA17_Chr2g0331771 30.968 155 101 2 49 202 264 413 8.59e-16 77.8
Msa0785430 MtrunA17_Chr7g0219891 28.272 191 115 7 145 318 122 307 2.98e-15 75.1
Msa0785430 MtrunA17_Chr7g0219891 27.586 203 131 7 121 314 3 198 8.06e-13 68.2
Msa0785430 MtrunA17_Chr4g0051841 27.717 184 117 4 139 315 27 201 1.11e-14 73.6
Msa0785430 MtrunA17_Chr4g0008061 24.306 288 195 7 40 318 21 294 1.53e-14 73.2
Msa0785430 MtrunA17_Chr1g0196161 30.108 186 112 5 40 221 3 174 3.84e-13 67.0
Msa0785430 MtrunA17_Chr1g0196161 25.714 175 128 2 146 320 2 174 4.38e-11 61.2
Msa0785430 MtrunA17_Chr2g0293621 24.265 272 187 7 59 318 52 316 1.18e-12 67.8
Msa0785430 MtrunA17_Chr7g0241521 22.635 296 206 7 40 326 23 304 1.41e-12 67.4
Msa0785430 MtrunA17_Chr5g0407451 25.698 179 123 3 137 315 19 187 1.89e-12 67.0
Msa0785430 MtrunA17_Chr6g0461981 27.751 209 132 8 118 317 37 235 2.29e-12 67.0
Msa0785430 MtrunA17_Chr8g0367641 21.148 331 204 11 31 323 3 314 3.16e-11 63.5
Msa0785430 MtrunA17_Chr5g0436571 21.190 269 184 6 76 317 48 315 3.61e-11 63.5
Msa0785430 MtrunA17_Chr7g0251981 27.586 174 113 5 148 317 90 254 3.81e-11 63.5
Msa0785430 MtrunA17_Chr3g0103681 24.104 307 209 7 25 321 6 298 4.04e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785430 AT3G55640.1 70.606 330 91 2 1 326 3 330 2.87e-170 476
Msa0785430 AT3G55640.4 70.606 330 91 2 1 326 3 330 2.87e-170 476
Msa0785430 AT3G53940.1 63.260 362 92 2 4 324 2 363 1.30e-164 463
Msa0785430 AT2G37890.1 63.881 335 110 1 1 324 1 335 1.90e-156 441
Msa0785430 AT3G55640.2 68.651 252 73 2 1 248 3 252 6.61e-122 351
Msa0785430 AT3G55640.2 32.353 204 120 6 127 318 26 223 1.29e-19 87.0
Msa0785430 AT3G55640.3 68.651 252 73 2 1 248 3 252 6.61e-122 351
Msa0785430 AT3G55640.3 32.353 204 120 6 127 318 26 223 1.29e-19 87.0
Msa0785430 AT3G53940.2 58.392 286 78 2 4 248 2 287 3.32e-113 330
Msa0785430 AT3G53940.2 29.358 218 133 4 113 318 50 258 1.46e-19 87.4
Msa0785430 AT4G01100.1 37.459 307 169 6 34 321 42 344 1.09e-60 198
Msa0785430 AT4G01100.1 34.031 191 116 4 136 318 37 225 4.55e-23 98.2
Msa0785430 AT4G01100.2 36.137 321 168 7 34 321 42 358 6.29e-58 191
Msa0785430 AT4G01100.2 32.683 205 114 5 136 318 37 239 3.13e-21 93.6
Msa0785430 AT4G01100.3 36.242 298 167 6 43 321 1 294 1.97e-56 185
Msa0785430 AT5G51050.1 35.974 303 165 9 26 321 215 495 6.34e-47 166
Msa0785430 AT4G26180.1 32.258 310 171 7 32 321 19 309 8.65e-45 156
Msa0785430 AT4G32400.1 35.473 296 171 7 30 323 110 387 1.41e-43 154
Msa0785430 AT4G32400.1 31.163 215 128 6 20 228 191 391 2.64e-21 94.0
Msa0785430 AT5G61810.2 32.423 293 170 7 34 322 65 333 9.46e-42 148
Msa0785430 AT5G61810.2 29.897 194 124 4 27 220 149 330 3.67e-19 87.0
Msa0785430 AT5G61810.1 32.423 293 170 7 34 322 208 476 1.33e-40 148
Msa0785430 AT5G61810.1 29.897 194 124 4 27 220 292 473 9.52e-19 87.0
Msa0785430 AT1G14560.1 32.203 295 164 8 45 318 38 317 1.73e-40 144
Msa0785430 AT1G14560.1 29.646 226 131 7 16 223 105 320 6.64e-21 92.0
Msa0785430 AT1G14560.1 30.435 184 114 4 153 323 39 221 1.05e-16 80.1
Msa0785430 AT5G48970.1 31.975 319 184 9 36 325 24 338 3.77e-40 144
Msa0785430 AT3G21390.1 31.596 307 180 7 36 315 21 324 5.36e-40 143
Msa0785430 AT3G21390.1 29.843 191 114 5 144 318 22 208 4.08e-19 87.0
Msa0785430 AT3G21390.2 31.596 307 180 7 36 315 43 346 6.63e-40 144
Msa0785430 AT3G21390.2 29.688 192 115 5 143 318 43 230 5.05e-19 87.0
Msa0785430 AT5G01500.1 32.258 279 169 5 45 322 130 389 9.51e-40 144
Msa0785430 AT3G51870.1 32.746 284 161 8 45 322 102 361 1.19e-39 144
Msa0785430 AT3G51870.1 29.609 179 108 6 153 323 103 271 1.69e-12 68.2
Msa0785430 AT4G26180.2 31.507 292 161 7 32 303 19 291 4.95e-39 140
Msa0785430 AT4G26180.2 30.729 192 117 5 140 318 20 208 1.21e-19 87.8
Msa0785430 AT5G64970.1 30.573 314 178 7 28 321 129 422 1.45e-35 134
Msa0785430 AT5G48970.2 33.333 264 152 7 82 325 8 267 3.16e-35 129
Msa0785430 AT5G48970.2 32.886 149 92 4 179 323 3 147 2.80e-17 80.9
Msa0785430 AT5G07320.1 32.404 287 160 10 43 322 218 477 3.44e-35 133
Msa0785430 AT5G07320.1 32.821 195 117 5 27 220 293 474 4.38e-19 88.2
Msa0785430 AT1G14560.2 31.429 280 156 8 45 303 38 302 1.11e-34 129
Msa0785430 AT1G14560.2 30.435 184 114 4 153 323 39 221 7.88e-17 80.1
Msa0785430 AT5G64970.2 30.293 307 174 7 35 321 12 298 1.23e-34 128
Msa0785430 AT5G56450.1 29.245 318 201 9 20 321 16 325 7.83e-33 124
Msa0785430 AT5G56450.1 26.282 156 110 2 174 325 79 233 2.10e-13 70.5
Msa0785430 AT1G78180.1 30.422 332 184 7 10 321 111 415 3.37e-31 122
Msa0785430 AT1G14560.3 34.649 228 118 7 112 318 2 219 1.91e-30 115
Msa0785430 AT1G14560.3 29.646 226 131 7 16 223 7 222 1.30e-21 92.0
Msa0785430 AT5G64970.3 30.068 296 167 7 28 303 129 404 8.05e-30 117
Msa0785430 AT4G11440.1 29.010 293 184 6 35 322 331 604 1.35e-26 110
Msa0785430 AT4G11440.2 29.010 293 184 6 35 322 331 604 1.35e-26 110
Msa0785430 AT3G08580.2 26.846 298 200 7 33 321 83 371 1.33e-25 105
Msa0785430 AT3G08580.1 26.846 298 200 7 33 321 83 371 1.33e-25 105
Msa0785430 AT3G20240.1 24.756 307 205 7 33 326 51 344 3.91e-25 103
Msa0785430 AT1G07030.1 27.703 296 195 6 34 325 40 320 4.61e-25 103
Msa0785430 AT1G07030.1 34.756 164 94 4 75 231 168 325 2.23e-16 79.0
Msa0785430 AT4G27940.1 29.231 260 160 5 80 321 154 407 1.04e-24 103
Msa0785430 AT2G30160.1 27.425 299 195 7 34 325 42 325 1.22e-24 102
Msa0785430 AT1G25380.1 30.742 283 172 8 46 317 33 302 3.53e-24 101
Msa0785430 AT1G25380.1 28.497 193 121 6 47 229 134 319 2.06e-17 82.4
Msa0785430 AT1G25380.2 30.742 283 172 8 46 317 33 302 3.53e-24 101
Msa0785430 AT1G25380.2 28.497 193 121 6 47 229 134 319 2.06e-17 82.4
Msa0785430 AT4G28390.1 25.879 313 213 8 19 321 66 369 3.58e-24 102
Msa0785430 AT4G28390.2 25.879 313 213 8 19 321 66 369 3.58e-24 102
Msa0785430 AT5G13490.1 25.839 298 203 7 33 321 87 375 9.07e-24 100
Msa0785430 AT5G13490.2 25.839 298 203 7 33 321 87 375 9.07e-24 100
Msa0785430 AT5G01340.1 25.083 303 195 8 20 311 8 289 2.55e-21 92.8
Msa0785430 AT1G34065.2 29.545 308 178 13 19 323 59 330 6.75e-21 92.0
Msa0785430 AT1G34065.2 29.469 207 127 5 25 230 147 335 1.23e-17 82.8
Msa0785430 AT1G34065.2 26.697 221 112 6 120 319 40 231 5.03e-13 69.3
Msa0785430 AT1G34065.1 29.545 308 178 13 19 323 66 337 7.12e-21 92.0
Msa0785430 AT1G34065.1 29.469 207 127 5 25 230 154 342 1.72e-17 82.4
Msa0785430 AT1G34065.1 26.697 221 112 6 120 319 47 238 5.97e-13 69.3
Msa0785430 AT2G47490.1 27.869 305 202 8 24 321 7 300 1.65e-20 90.5
Msa0785430 AT2G47490.1 35.057 174 102 5 157 323 33 202 2.25e-15 75.9
Msa0785430 AT2G47490.1 28.947 190 123 7 48 233 131 312 7.58e-15 74.3
Msa0785430 AT5G66380.1 28.990 307 189 10 36 326 12 305 4.50e-20 89.4
Msa0785430 AT5G17400.1 24.476 286 200 6 32 309 12 289 5.42e-19 86.3
Msa0785430 AT1G14140.1 24.262 305 200 7 30 320 12 299 3.80e-18 84.0
Msa0785430 AT5G46800.2 25.325 308 196 7 33 321 7 299 1.32e-17 82.4
Msa0785430 AT5G46800.2 29.208 202 129 3 135 322 2 203 1.67e-17 82.0
Msa0785430 AT5G46800.3 25.325 308 196 7 33 321 7 299 1.32e-17 82.4
Msa0785430 AT5G46800.3 29.208 202 129 3 135 322 2 203 1.67e-17 82.0
Msa0785430 AT5G46800.1 25.325 308 196 7 33 321 7 299 1.32e-17 82.4
Msa0785430 AT5G46800.1 29.208 202 129 3 135 322 2 203 1.67e-17 82.0
Msa0785430 AT1G79900.1 30.256 195 119 5 37 229 112 291 9.10e-17 79.7
Msa0785430 AT2G33820.1 26.282 312 198 11 26 320 10 306 2.97e-16 78.6
Msa0785430 AT5G58970.1 26.115 314 195 9 24 321 6 298 6.58e-16 77.4
Msa0785430 AT4G39460.2 29.808 208 122 5 25 228 130 317 6.66e-16 77.8
Msa0785430 AT4G39460.2 27.797 295 169 12 34 323 58 313 1.06e-15 77.0
Msa0785430 AT4G39460.1 29.808 208 122 5 25 228 130 317 6.66e-16 77.8
Msa0785430 AT4G39460.1 27.797 295 169 12 34 323 58 313 1.06e-15 77.0
Msa0785430 AT4G39460.3 29.808 208 122 5 25 228 130 317 6.66e-16 77.8
Msa0785430 AT4G39460.3 27.797 295 169 12 34 323 58 313 1.06e-15 77.0
Msa0785430 AT2G46320.1 26.848 257 156 7 81 318 109 352 2.07e-15 76.6
Msa0785430 AT1G74240.1 24.545 330 208 6 16 318 18 333 5.71e-15 75.5
Msa0785430 AT5G42130.1 24.549 277 187 5 50 321 134 393 1.25e-14 74.7
Msa0785430 AT3G54110.1 23.208 293 204 6 40 324 21 300 1.77e-14 73.2
Msa0785430 AT3G54110.1 24.868 189 133 2 33 221 117 296 3.72e-11 63.5
Msa0785430 AT2G46320.3 26.482 253 154 7 85 318 14 253 3.10e-14 72.0
Msa0785430 AT2G46320.2 26.482 253 154 7 85 318 14 253 3.10e-14 72.0
Msa0785430 AT2G46320.5 26.482 253 154 7 85 318 14 253 3.10e-14 72.0
Msa0785430 AT4G03115.5 26.425 193 121 4 33 221 62 237 4.39e-14 71.2
Msa0785430 AT4G03115.5 23.243 185 137 2 134 318 56 235 4.77e-12 65.5
Msa0785430 AT4G03115.6 26.425 193 121 4 33 221 70 245 4.53e-14 71.2
Msa0785430 AT4G03115.6 21.429 238 174 3 81 318 19 243 4.13e-12 65.9
Msa0785430 AT4G03115.1 21.725 313 224 6 9 318 12 306 6.18e-14 72.0
Msa0785430 AT4G03115.1 26.425 193 121 4 33 221 133 308 6.41e-14 71.6
Msa0785430 AT2G33820.3 25.625 320 198 12 26 320 10 314 8.46e-14 71.6
Msa0785430 AT4G03115.3 21.382 304 221 5 15 318 53 338 1.06e-13 71.2
Msa0785430 AT4G03115.3 26.425 193 121 4 33 221 165 340 1.14e-13 71.2
Msa0785430 AT2G22500.1 22.884 319 197 9 37 323 9 310 2.65e-13 70.1
Msa0785430 AT3G48850.1 27.128 188 124 5 142 324 72 251 3.12e-13 70.1
Msa0785430 AT5G15640.1 28.500 200 119 6 142 322 126 320 9.83e-13 68.6
Msa0785430 AT5G15640.2 28.500 200 119 6 142 322 119 313 9.90e-13 68.2
Msa0785430 AT5G09470.1 25.926 189 133 2 31 219 148 329 1.13e-12 68.2
Msa0785430 AT4G24570.1 21.429 322 212 7 31 323 3 312 1.24e-12 68.2
Msa0785430 AT2G17270.1 24.713 174 123 2 142 315 23 188 1.92e-12 67.4
Msa0785430 AT5G14040.1 28.736 174 111 5 148 317 90 254 2.76e-11 64.3
Msa0785430 AT2G33820.2 25.424 177 131 1 41 216 43 219 2.95e-11 62.8
Msa0785430 AT1G74240.2 24.101 278 172 5 68 318 20 285 5.43e-11 63.2

Find 144 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCTTGTGGCAGTCTTTC+AGG 0.123605 5_2:+70459169 Msa0785430:CDS
TCTTGATGTGTGGTGGAATT+TGG 0.155092 5_2:-70456730 None:intergenic
TTAAAATGTTGTCAATTTAT+AGG 0.178484 5_2:+70461450 Msa0785430:three_prime_UTR
TAATATTAGGCTGTTACTTA+TGG 0.183522 5_2:+70461093 Msa0785430:three_prime_UTR
TAAAATGTTGTCAATTTATA+GGG 0.206308 5_2:+70461451 Msa0785430:three_prime_UTR
GAAGAAGAGAGGGGTAAAAT+TGG 0.214246 5_2:+70457003 Msa0785430:five_prime_UTR
CTTGATGTGTGGTGGAATTT+GGG 0.218731 5_2:-70456729 None:intergenic
AGGAGTGTTTAAAGGATTAA+AGG 0.219239 5_2:-70456803 None:intergenic
CTTGAACAACATTTAATATT+AGG 0.219324 5_2:+70461080 Msa0785430:three_prime_UTR
AAGTACTCTGGATTTGTTAT+AGG 0.235513 5_2:+70461410 Msa0785430:three_prime_UTR
TAATCCATGAAGAGGGGTTT+AGG 0.243240 5_2:+70458214 Msa0785430:CDS
GAGAAGCTGATTGCTATATT+TGG 0.270991 5_2:-70458970 None:intergenic
AGAGGGGTAAAATTGGAATT+TGG 0.273177 5_2:+70457010 Msa0785430:five_prime_UTR
GGGATTACTCGGCCTTTATA+AGG 0.273893 5_2:+70458835 Msa0785430:CDS
TCTGACAAAATTCTTCAAAT+AGG 0.306711 5_2:+70461482 Msa0785430:three_prime_UTR
CTTTGAGGAAAGCGAGTATA+TGG 0.320572 5_2:+70458175 Msa0785430:CDS
AATATTAGGCTGTTACTTAT+GGG 0.322912 5_2:+70461094 Msa0785430:three_prime_UTR
GCTTCAAGAGGAGTGTTTAA+AGG 0.336382 5_2:-70456811 None:intergenic
AATCCATGAAGAGGGGTTTA+GGG 0.337988 5_2:+70458215 Msa0785430:CDS
TTTACTTACTATAGAGGTAT+TGG 0.338091 5_2:+70458782 Msa0785430:CDS
ATGAAAGCTTGAGATCGTTT+TGG 0.339773 5_2:+70458998 Msa0785430:CDS
CGATCTCAAGCTTTCATATA+CGG 0.347975 5_2:-70458992 None:intergenic
TTCAACTGTTGTTGTTAGTC+TGG 0.353204 5_2:+70459150 Msa0785430:CDS
ATTCTAATGTTGCAACTTTG+AGG 0.359407 5_2:+70458160 Msa0785430:CDS
AAGCCCTAAACCCCTCTTCA+TGG 0.361238 5_2:-70458218 None:intergenic
TGTGGTGGAATTTGGGGTTA+AGG 0.361792 5_2:-70456722 None:intergenic
AGTACTCTGGATTTGTTATA+GGG 0.363578 5_2:+70461411 Msa0785430:three_prime_UTR
GGCACAACCTTATAGTATTC+AGG 0.364759 5_2:-70460806 None:intergenic
GTGGTGGAATTTGGGGTTAA+GGG 0.367067 5_2:-70456721 None:intergenic
TTTGTTGGTGGTGGGTTGGC+AGG 0.370802 5_2:+70458477 Msa0785430:CDS
AATAACAGAAAGTGGTGTTA+AGG 0.391872 5_2:+70456968 Msa0785430:five_prime_UTR
AATCGATAAATATAACTTAA+CGG 0.395467 5_2:-70460976 None:intergenic
TTTCCTAGATTCTCATGGTT+GGG 0.404016 5_2:+70461009 Msa0785430:three_prime_UTR
TATCATTGCTATAGGAAGAA+TGG 0.405778 5_2:-70461281 None:intergenic
CTCGGCCTTTATAAGGGACT+TGG 0.408288 5_2:+70458842 Msa0785430:CDS
TCAGGCATTGCATCATCAAC+AGG 0.416081 5_2:+70459187 Msa0785430:CDS
ATGGTGCACAACACTGCAAC+GGG 0.419445 5_2:-70461238 None:intergenic
AAGTTACTTATTCATGCAAA+AGG 0.422848 5_2:+70460946 Msa0785430:three_prime_UTR
AAGAACGCGGCTTGCTGCAC+AGG 0.423096 5_2:+70458539 Msa0785430:CDS
CTTCTCGCCGGAGGAGTTGC+CGG 0.423493 5_2:+70457134 Msa0785430:CDS
ACAAACAATTGTCAAGGAAG+AGG 0.426240 5_2:+70458814 Msa0785430:CDS
GGATTACTCGGCCTTTATAA+GGG 0.437307 5_2:+70458836 Msa0785430:CDS
AACTGCAACTCAGTGCCTTA+AGG 0.438783 5_2:+70461179 Msa0785430:three_prime_UTR
ATAACAGAAAGTGGTGTTAA+GGG 0.438835 5_2:+70456969 Msa0785430:five_prime_UTR
TAGTTCCAAGTCCCTTATAA+AGG 0.439391 5_2:-70458847 None:intergenic
ATGATTACACCCATCAACTT+TGG 0.439933 5_2:+70460895 Msa0785430:exon
AAATAGAGAAGAAGAAGAGA+GGG 0.443517 5_2:+70456993 Msa0785430:five_prime_UTR
ATTTCCTAGATTCTCATGGT+TGG 0.444299 5_2:+70461008 Msa0785430:three_prime_UTR
GATTTCACAAGTGCATTTGA+AGG 0.447004 5_2:+70461207 Msa0785430:three_prime_UTR
AAAACGGTAGCGTATTAAGA+AGG 0.449560 5_2:-70456838 None:intergenic
TAACGGTGGACGGTGGTGTT+CGG 0.453198 5_2:+70457060 Msa0785430:CDS
GCACAACACTGCAACGGGAC+TGG 0.455922 5_2:-70461233 None:intergenic
CAACCACCGCCGCAACAGAT+TGG 0.456851 5_2:+70457098 Msa0785430:CDS
GTTCCAATCTGTTGCGGCGG+TGG 0.457668 5_2:-70457101 None:intergenic
TTGTGAAATCTGTCTCCTTA+AGG 0.458844 5_2:-70461194 None:intergenic
TAAAAGTTAACAGAAGAGTA+AGG 0.459944 5_2:-70458279 None:intergenic
TCAATTTCAATAACAGAAAG+TGG 0.465691 5_2:+70456960 Msa0785430:five_prime_UTR
GAATTTATCACTTTCACTAC+GGG 0.467120 5_2:-70461381 None:intergenic
TGCTACATCTACTTATCCCT+TGG 0.467252 5_2:+70458509 Msa0785430:CDS
ATCATTGCTATAGGAAGAAT+GGG 0.467323 5_2:-70461280 None:intergenic
GTACATTCAAGCATATATTC+CGG 0.468396 5_2:+70460747 Msa0785430:CDS
TTCAAGAATAATCCATGAAG+AGG 0.469893 5_2:+70458206 Msa0785430:CDS
TGGAGATGCAAACGGAAGCT+AGG 0.470661 5_2:+70457030 Msa0785430:exon
TGGTGCTAATGCAGACTGTT+GGG 0.472674 5_2:+70458947 Msa0785430:intron
CATGTAACTATCATTGCTAT+AGG 0.473503 5_2:-70461289 None:intergenic
ATATGCAGCAACGTTTCCAT+TGG 0.474353 5_2:+70460652 Msa0785430:intron
GTGTACAATACAGGTCTCTT+TGG 0.475434 5_2:+70460725 Msa0785430:CDS
TTGCCCAACCATGAGAATCT+AGG 0.477342 5_2:-70461012 None:intergenic
CAGGTAAAATTCCTCTGTAA+AGG 0.481174 5_2:-70460787 None:intergenic
CTGGTGCTAATGCAGACTGT+TGG 0.488868 5_2:+70458946 Msa0785430:intron
AAATTCATTATCAAGTACTC+TGG 0.489657 5_2:+70461398 Msa0785430:three_prime_UTR
TTGGAATTTGGAGATGCAAA+CGG 0.491470 5_2:+70457022 Msa0785430:exon
CAAAGCTCCGGCAACTCCTC+CGG 0.494245 5_2:-70457141 None:intergenic
TGGTGGAATTTGGGGTTAAG+GGG 0.494385 5_2:-70456720 None:intergenic
CAAACAATTGTCAAGGAAGA+GGG 0.494902 5_2:+70458815 Msa0785430:CDS
CGAGCCCGTGTGTACAATAC+AGG 0.501443 5_2:+70460716 Msa0785430:CDS
AACCATCTTCAGTGTCTCAT+AGG 0.501803 5_2:-70460852 None:intergenic
GACCTATGAGACACTGAAGA+TGG 0.501950 5_2:+70460850 Msa0785430:CDS
TCTCTATTACTTTGCAGTTG+CGG 0.504953 5_2:-70458426 None:intergenic
TGAATTTATCACTTTCACTA+CGG 0.509175 5_2:-70461382 None:intergenic
AGATCAGACTCCAAAGTTGA+TGG 0.510404 5_2:-70460905 None:intergenic
CGACGTCGCTTAATAGCAAA+AGG 0.510987 5_2:+70456882 Msa0785430:five_prime_UTR
TGTTGTTCAAGTGTCTGTAC+AGG 0.520385 5_2:-70461068 None:intergenic
TTCTTACGAGCATTACAAGA+AGG 0.526863 5_2:+70458302 Msa0785430:CDS
AAAATAGAGAAGAAGAAGAG+AGG 0.527927 5_2:+70456992 Msa0785430:five_prime_UTR
AGTTACTTATTCATGCAAAA+GGG 0.528314 5_2:+70460947 Msa0785430:three_prime_UTR
TATAAGGTTGTGCCTGGTGT+AGG 0.529307 5_2:+70460815 Msa0785430:CDS
TAACAGAAGAGTAAGGTAAA+CGG 0.531609 5_2:-70458272 None:intergenic
GGAAGCTAGGGTTGGTGTAA+CGG 0.532148 5_2:+70457043 Msa0785430:CDS
GTTTCTTTCTTGATGTGTGG+TGG 0.532242 5_2:-70456737 None:intergenic
CTCCGTCTAACAAGATCCAA+TGG 0.539106 5_2:-70460668 None:intergenic
TCTCATTTCCTAGATTCTCA+TGG 0.539490 5_2:+70461004 Msa0785430:three_prime_UTR
TCAAGAATAATCCATGAAGA+GGG 0.543154 5_2:+70458207 Msa0785430:CDS
GTTTAAAGGATTAAAGGTGT+TGG 0.546498 5_2:-70456797 None:intergenic
GCGATTCGGTTTGTTCAAAA+CGG 0.548785 5_2:-70456854 None:intergenic
TTGATGTGTGGTGGAATTTG+GGG 0.550951 5_2:-70456728 None:intergenic
AGGGTTGGTGTAACGGTGGA+CGG 0.554866 5_2:+70457050 Msa0785430:CDS
TAAGAAGGGTTTGCTTCAAG+AGG 0.555154 5_2:-70456823 None:intergenic
GGAGATGCAAACGGAAGCTA+GGG 0.555939 5_2:+70457031 Msa0785430:exon
AACAACAACAGTTGAATCAT+CGG 0.558241 5_2:-70459143 None:intergenic
AAACGGTAGCGTATTAAGAA+GGG 0.559225 5_2:-70456837 None:intergenic
GTCAAGGAAGAGGGATTACT+CGG 0.560113 5_2:+70458824 Msa0785430:CDS
ACTATTTCTCAGCTTCTCGC+CGG 0.561608 5_2:+70457122 Msa0785430:CDS
AAGCATATATTCCGGTCAGA+AGG 0.563525 5_2:+70460755 Msa0785430:CDS
TGTGTTTCTTTCTTGATGTG+TGG 0.564216 5_2:-70456740 None:intergenic
TTCCATTGGATCTTGTTAGA+CGG 0.564464 5_2:+70460666 Msa0785430:CDS
CAACGTTGTAGTGCTACTGT+GGG 0.571966 5_2:+70461032 Msa0785430:three_prime_UTR
GGGACTTGGAACTACCCTCT+TGG 0.572235 5_2:+70458856 Msa0785430:CDS
AGTTGATGGGTGTAATCATA+CGG 0.572720 5_2:-70460891 None:intergenic
CCGCGTTCTTACAAGATCCA+AGG 0.576326 5_2:-70458526 None:intergenic
TGCTTTACAAACAATTGTCA+AGG 0.578320 5_2:+70458808 Msa0785430:CDS
AGACGGAGGAAGCAACTTGA+GGG 0.579075 5_2:+70460683 Msa0785430:CDS
GATCAGACTCCAAAGTTGAT+GGG 0.580419 5_2:-70460904 None:intergenic
CGCGTTCTTACAAGATCCAA+GGG 0.583255 5_2:-70458525 None:intergenic
GGCCACGCAAACCTTCTGAC+CGG 0.592865 5_2:-70460766 None:intergenic
TAGACGGAGGAAGCAACTTG+AGG 0.593462 5_2:+70460682 Msa0785430:CDS
CATGGTGCACAACACTGCAA+CGG 0.595976 5_2:-70461239 None:intergenic
TCACTTCTCAAAAGATTACA+TGG 0.596401 5_2:-70461257 None:intergenic
GCAACGTTGTAGTGCTACTG+TGG 0.600874 5_2:+70461031 Msa0785430:three_prime_UTR
ATTTCTCAGCTTCTCGCCGG+AGG 0.601058 5_2:+70457125 Msa0785430:CDS
GAATACTATAAGGTTGTGCC+TGG 0.602847 5_2:+70460809 Msa0785430:CDS
ATGCAAACGGAAGCTAGGGT+TGG 0.605982 5_2:+70457035 Msa0785430:CDS
AATGAAATTACTATATAGCA+AGG 0.608367 5_2:+70461152 Msa0785430:three_prime_UTR
CCTTGGATCTTGTAAGAACG+CGG 0.611552 5_2:+70458526 Msa0785430:CDS
TTCCGGTCAGAAGGTTTGCG+TGG 0.617988 5_2:+70460764 Msa0785430:CDS
TACGGGCCAAATGAAAACAA+TGG 0.624377 5_2:-70461364 None:intergenic
CATTGGATCTTGTTAGACGG+AGG 0.625988 5_2:+70460669 Msa0785430:CDS
AATAGAGAAGAAGAAGAGAG+GGG 0.627858 5_2:+70456994 Msa0785430:five_prime_UTR
GAAATAGTTCCAATCTGTTG+CGG 0.634856 5_2:-70457107 None:intergenic
AGAGACCTGTATTGTACACA+CGG 0.636276 5_2:-70460721 None:intergenic
GGTTTGCGTGGCCTTTACAG+AGG 0.639547 5_2:+70460776 Msa0785430:CDS
CAAGAATAATCCATGAAGAG+GGG 0.640978 5_2:+70458208 Msa0785430:CDS
GTTGTTGTTAGTCTGGCTTG+TGG 0.646435 5_2:+70459157 Msa0785430:CDS
AGCTAGGGTTGGTGTAACGG+TGG 0.654947 5_2:+70457046 Msa0785430:CDS
ACGGAGGAAGCAACTTGAGG+GGG 0.659118 5_2:+70460685 Msa0785430:CDS
GTTGGTGTAACGGTGGACGG+TGG 0.659448 5_2:+70457053 Msa0785430:CDS
GACGGAGGAAGCAACTTGAG+GGG 0.659793 5_2:+70460684 Msa0785430:CDS
ATAGTTCCAATCTGTTGCGG+CGG 0.660860 5_2:-70457104 None:intergenic
ATAAAACAAATGCCTACACC+AGG 0.667613 5_2:-70460827 None:intergenic
AGGATTGTGAGTCTAGCAAG+TGG 0.683649 5_2:-70457182 None:intergenic
ATAATAACATCATACCAAGA+GGG 0.684442 5_2:-70458870 None:intergenic
GAGACCTGTATTGTACACAC+GGG 0.686846 5_2:-70460720 None:intergenic
AACGTTGTAGTGCTACTGTG+GGG 0.690126 5_2:+70461033 Msa0785430:three_prime_UTR
GTGTTGGTAGTGATCTAATG+CGG 0.790341 5_2:-70456781 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTCATTTTGTTAT+TGG + chr5_2:70457258-70457277 Msa0785430:intron 10.0%
!!! TTTTTATTCATTTTGTTATT+GGG + chr5_2:70457259-70457278 Msa0785430:intron 10.0%
!!! TTAGTAATTTTGTTGTATTT+TGG + chr5_2:70457284-70457303 Msa0785430:intron 15.0%
!!! TTTTGAATTGAGATAATTTT+GGG + chr5_2:70457378-70457397 Msa0785430:intron 15.0%
!! TTATGAAAATAAGGTAAAAA+TGG + chr5_2:70457609-70457628 Msa0785430:intron 15.0%
!!! ATAATAATTCTAGAAAACTA+AGG - chr5_2:70458096-70458115 None:intergenic 15.0%
!!! TTCTTCAATTTTTATTTAAC+TGG - chr5_2:70459443-70459462 None:intergenic 15.0%
!!! CAATTGATATTGATAATATA+TGG - chr5_2:70460091-70460110 None:intergenic 15.0%
!! CATATATTATCAATATCAAT+TGG + chr5_2:70460089-70460108 Msa0785430:intron 15.0%
!! AATCGATAAATATAACTTAA+CGG - chr5_2:70460979-70460998 None:intergenic 15.0%
!! TTAAAATGTTGTCAATTTAT+AGG + chr5_2:70461450-70461469 Msa0785430:three_prime_UTR 15.0%
!! TAAAATGTTGTCAATTTATA+GGG + chr5_2:70461451-70461470 Msa0785430:three_prime_UTR 15.0%
!!! ATAAATTTTTCACCTGAAAA+AGG - chr5_2:70457205-70457224 None:intergenic 20.0%
!! ACTGTATGAGTTAATTAATT+TGG + chr5_2:70457355-70457374 Msa0785430:intron 20.0%
!!! GTTTTGAATTGAGATAATTT+TGG + chr5_2:70457377-70457396 Msa0785430:intron 20.0%
!!! TTTGAATTGAGATAATTTTG+GGG + chr5_2:70457379-70457398 Msa0785430:intron 20.0%
!! ATAAGTTGTTTATCCAAATA+GGG + chr5_2:70457858-70457877 Msa0785430:intron 20.0%
!!! TATAATTTTTATCACTGTGT+TGG + chr5_2:70457998-70458017 Msa0785430:intron 20.0%
!!! TTATAATTTTTGCAGATTCA+AGG + chr5_2:70458132-70458151 Msa0785430:intron 20.0%
!!! TATAATTTTTGCAGATTCAA+GGG + chr5_2:70458133-70458152 Msa0785430:intron 20.0%
!! TTTCCAAAATTGAAATTAAG+AGG - chr5_2:70458630-70458649 None:intergenic 20.0%
!! TATGAATATACATGAATTAG+AGG - chr5_2:70459082-70459101 None:intergenic 20.0%
!! AAATTATCAGGAATATGTAT+AGG - chr5_2:70459304-70459323 None:intergenic 20.0%
!! ACATCAAAAGTTAAATTATC+AGG - chr5_2:70459316-70459335 None:intergenic 20.0%
!! AAATTCAATAGTTTGACTAA+AGG - chr5_2:70459467-70459486 None:intergenic 20.0%
!! TAATAAATTTCCTGAAAAAC+AGG - chr5_2:70459668-70459687 None:intergenic 20.0%
!! CATGTCATAAAATAAAACTT+GGG - chr5_2:70459723-70459742 None:intergenic 20.0%
!! ACATGTCATAAAATAAAACT+TGG - chr5_2:70459724-70459743 None:intergenic 20.0%
!! ATAAATGAAATTGTCAACAT+AGG + chr5_2:70460029-70460048 Msa0785430:intron 20.0%
!! TATTATCAATATCAATTGGA+TGG + chr5_2:70460093-70460112 Msa0785430:intron 20.0%
!!! AACATAATTTGTTATTGAAG+TGG - chr5_2:70460450-70460469 None:intergenic 20.0%
!! TTCAAATATGATTAGATTTC+TGG + chr5_2:70460491-70460510 Msa0785430:intron 20.0%
!!! TATAACATTACTTGATTTGA+TGG + chr5_2:70460544-70460563 Msa0785430:intron 20.0%
!!! AATTTTACCTGAATACTATA+AGG + chr5_2:70460799-70460818 Msa0785430:CDS 20.0%
!! CTTGAACAACATTTAATATT+AGG + chr5_2:70461080-70461099 Msa0785430:three_prime_UTR 20.0%
!! AATGAAATTACTATATAGCA+AGG + chr5_2:70461152-70461171 Msa0785430:three_prime_UTR 20.0%
!! ACAAAAATAAAGAAAAGCAA+AGG - chr5_2:70461319-70461338 None:intergenic 20.0%
! TCAATTTCAATAACAGAAAG+TGG + chr5_2:70456960-70456979 Msa0785430:five_prime_UTR 25.0%
! TTAGCGAGTTTATGAAAATA+AGG + chr5_2:70457600-70457619 Msa0785430:intron 25.0%
! AATAAGGTAAAAATGGTATG+TGG + chr5_2:70457616-70457635 Msa0785430:intron 25.0%
! ATAAGGTAAAAATGGTATGT+GGG + chr5_2:70457617-70457636 Msa0785430:intron 25.0%
! GATAAGTTGTTTATCCAAAT+AGG + chr5_2:70457857-70457876 Msa0785430:intron 25.0%
! TCAAATAAGTCAATCAAAAC+AGG + chr5_2:70457918-70457937 Msa0785430:intron 25.0%
! TAAAAGTTAACAGAAGAGTA+AGG - chr5_2:70458282-70458301 None:intergenic 25.0%
! TTACAAGAAGGTAAGAATAT+TGG + chr5_2:70458314-70458333 Msa0785430:intron 25.0%
!! GATCTTTGTATACATTTTGT+TGG + chr5_2:70458462-70458481 Msa0785430:CDS 25.0%
!! CATCCTCTTAATTTCAATTT+TGG + chr5_2:70458624-70458643 Msa0785430:intron 25.0%
!! ACGAATTTTACTTACTATAG+AGG + chr5_2:70458776-70458795 Msa0785430:CDS 25.0%
!! TTTACTTACTATAGAGGTAT+TGG + chr5_2:70458782-70458801 Msa0785430:CDS 25.0%
! ATAATAACATCATACCAAGA+GGG - chr5_2:70458873-70458892 None:intergenic 25.0%
!! TTTTGATGTTTCTTGCAATT+GGG + chr5_2:70459327-70459346 Msa0785430:intron 25.0%
! AAAGAAGTTAATATCTGTAG+TGG + chr5_2:70459505-70459524 Msa0785430:intron 25.0%
!! TGCCATTTGAAAATTTAGTA+AGG + chr5_2:70459619-70459638 Msa0785430:intron 25.0%
! GCCATTTGAAAATTTAGTAA+GGG + chr5_2:70459620-70459639 Msa0785430:intron 25.0%
!! TCCCTTACTAAATTTTCAAA+TGG - chr5_2:70459624-70459643 None:intergenic 25.0%
!! AATCACAATTTTCTTCGTTT+AGG - chr5_2:70459970-70459989 None:intergenic 25.0%
! TGACAATTTCATTTATCCAT+TGG - chr5_2:70460025-70460044 None:intergenic 25.0%
!! ATATGGTTTTCTTTCTTTGA+AGG - chr5_2:70460074-70460093 None:intergenic 25.0%
! AAAACATACTATTGCTGTAT+TGG - chr5_2:70460179-70460198 None:intergenic 25.0%
!!! TATGATTAGATTTCTGGTTT+TGG + chr5_2:70460497-70460516 Msa0785430:intron 25.0%
! AAGTTACTTATTCATGCAAA+AGG + chr5_2:70460946-70460965 Msa0785430:three_prime_UTR 25.0%
! AGTTACTTATTCATGCAAAA+GGG + chr5_2:70460947-70460966 Msa0785430:three_prime_UTR 25.0%
!! TAATATTAGGCTGTTACTTA+TGG + chr5_2:70461093-70461112 Msa0785430:three_prime_UTR 25.0%
!! AATATTAGGCTGTTACTTAT+GGG + chr5_2:70461094-70461113 Msa0785430:three_prime_UTR 25.0%
! TGAATTTATCACTTTCACTA+CGG - chr5_2:70461385-70461404 None:intergenic 25.0%
! AAATTCATTATCAAGTACTC+TGG + chr5_2:70461398-70461417 Msa0785430:three_prime_UTR 25.0%
! TCTGACAAAATTCTTCAAAT+AGG + chr5_2:70461482-70461501 Msa0785430:three_prime_UTR 25.0%
! GTTTAAAGGATTAAAGGTGT+TGG - chr5_2:70456800-70456819 None:intergenic 30.0%
!! AGGAGTGTTTAAAGGATTAA+AGG - chr5_2:70456806-70456825 None:intergenic 30.0%
! AATAACAGAAAGTGGTGTTA+AGG + chr5_2:70456968-70456987 Msa0785430:five_prime_UTR 30.0%
! ATAACAGAAAGTGGTGTTAA+GGG + chr5_2:70456969-70456988 Msa0785430:five_prime_UTR 30.0%
AAAATAGAGAAGAAGAAGAG+AGG + chr5_2:70456992-70457011 Msa0785430:five_prime_UTR 30.0%
AAATAGAGAAGAAGAAGAGA+GGG + chr5_2:70456993-70457012 Msa0785430:five_prime_UTR 30.0%
TCATAACTCATAAGCTGTTT+GGG + chr5_2:70457644-70457663 Msa0785430:intron 30.0%
ACTGTTATCATTAGCTATCT+TGG - chr5_2:70457735-70457754 None:intergenic 30.0%
! CTCTCGAATTTCGATAATTT+TGG + chr5_2:70457955-70457974 Msa0785430:intron 30.0%
ATTCTAATGTTGCAACTTTG+AGG + chr5_2:70458160-70458179 Msa0785430:CDS 30.0%
TTCAAGAATAATCCATGAAG+AGG + chr5_2:70458206-70458225 Msa0785430:CDS 30.0%
TCAAGAATAATCCATGAAGA+GGG + chr5_2:70458207-70458226 Msa0785430:CDS 30.0%
TAACAGAAGAGTAAGGTAAA+CGG - chr5_2:70458275-70458294 None:intergenic 30.0%
!! TTGATATGCACTTTTGTTGT+CGG + chr5_2:70458350-70458369 Msa0785430:intron 30.0%
! CTTTGTATACATTTTGTTGG+TGG + chr5_2:70458465-70458484 Msa0785430:CDS 30.0%
TGCTTTACAAACAATTGTCA+AGG + chr5_2:70458808-70458827 Msa0785430:CDS 30.0%
GATAATAACATCATACCAAG+AGG - chr5_2:70458874-70458893 None:intergenic 30.0%
! GGAATATATGCTTTGAGTAA+TGG - chr5_2:70458903-70458922 None:intergenic 30.0%
AAGCATATATTCCTTTCTTG+TGG + chr5_2:70458910-70458929 Msa0785430:intron 30.0%
ATGAATTAGAGGAAAATCAG+TGG - chr5_2:70459071-70459090 None:intergenic 30.0%
AACAACAACAGTTGAATCAT+CGG - chr5_2:70459146-70459165 None:intergenic 30.0%
! TCAACAGGTTAGTTATCAAA+AGG + chr5_2:70459202-70459221 Msa0785430:intron 30.0%
! TCTTGATTGTTGAACTTTTG+AGG + chr5_2:70459270-70459289 Msa0785430:intron 30.0%
! CTTTTGATGTTTCTTGCAAT+TGG + chr5_2:70459326-70459345 Msa0785430:intron 30.0%
TTTGATGTTTCTTGCAATTG+GGG + chr5_2:70459328-70459347 Msa0785430:intron 30.0%
! TTGGGGTTTGTATATTCTTT+TGG + chr5_2:70459345-70459364 Msa0785430:intron 30.0%
ATAAAATAACAACTCCATCC+CGG - chr5_2:70459598-70459617 None:intergenic 30.0%
CAAGAAATGACATTATGTGA+CGG - chr5_2:70459770-70459789 None:intergenic 30.0%
TATCAATATCAATTGGATGG+TGG + chr5_2:70460096-70460115 Msa0785430:intron 30.0%
TTCTATTGACACTAACTACT+TGG + chr5_2:70460136-70460155 Msa0785430:intron 30.0%
!!! TTTTGGAATTAGTTCTCACT+GGG + chr5_2:70460514-70460533 Msa0785430:intron 30.0%
ATGGTGCATTTCACATAAAA+AGG + chr5_2:70460563-70460582 Msa0785430:intron 30.0%
TGGTGCATTTCACATAAAAA+GGG + chr5_2:70460564-70460583 Msa0785430:intron 30.0%
ATTTCACATAAAAAGGGATC+AGG + chr5_2:70460570-70460589 Msa0785430:intron 30.0%
GTACATTCAAGCATATATTC+CGG + chr5_2:70460747-70460766 Msa0785430:CDS 30.0%
TCACTTCTCAAAAGATTACA+TGG - chr5_2:70461260-70461279 None:intergenic 30.0%
ATCATTGCTATAGGAAGAAT+GGG - chr5_2:70461283-70461302 None:intergenic 30.0%
TATCATTGCTATAGGAAGAA+TGG - chr5_2:70461284-70461303 None:intergenic 30.0%
CATGTAACTATCATTGCTAT+AGG - chr5_2:70461292-70461311 None:intergenic 30.0%
! TGTAGTCCATTGTTTTCATT+TGG + chr5_2:70461358-70461377 Msa0785430:three_prime_UTR 30.0%
GAATTTATCACTTTCACTAC+GGG - chr5_2:70461384-70461403 None:intergenic 30.0%
!! AAGTACTCTGGATTTGTTAT+AGG + chr5_2:70461410-70461429 Msa0785430:three_prime_UTR 30.0%
!! AGTACTCTGGATTTGTTATA+GGG + chr5_2:70461411-70461430 Msa0785430:three_prime_UTR 30.0%
TGTGTTTCTTTCTTGATGTG+TGG - chr5_2:70456743-70456762 None:intergenic 35.0%
AAACGGTAGCGTATTAAGAA+GGG - chr5_2:70456840-70456859 None:intergenic 35.0%
AAAACGGTAGCGTATTAAGA+AGG - chr5_2:70456841-70456860 None:intergenic 35.0%
AATAGAGAAGAAGAAGAGAG+GGG + chr5_2:70456994-70457013 Msa0785430:five_prime_UTR 35.0%
AGAGGGGTAAAATTGGAATT+TGG + chr5_2:70457010-70457029 Msa0785430:five_prime_UTR 35.0%
TTGGAATTTGGAGATGCAAA+CGG + chr5_2:70457022-70457041 Msa0785430:exon 35.0%
GAAATAGTTCCAATCTGTTG+CGG - chr5_2:70457110-70457129 None:intergenic 35.0%
! ACAAGTTTTACTCAAAGCTC+CGG - chr5_2:70457156-70457175 None:intergenic 35.0%
! TAGACTCACAATCCTTTTTC+AGG + chr5_2:70457190-70457209 Msa0785430:CDS 35.0%
!! GATAATTTTGGGGACTGAAT+TGG + chr5_2:70457389-70457408 Msa0785430:intron 35.0%
!! GGTTGTTGCTTATGATTTTG+TGG + chr5_2:70457410-70457429 Msa0785430:intron 35.0%
GTCATAACTCATAAGCTGTT+TGG + chr5_2:70457643-70457662 Msa0785430:intron 35.0%
TGTAAGACTATGACCCTATT+TGG - chr5_2:70457874-70457893 None:intergenic 35.0%
AACAATGATTGAGAGAGAGA+TGG + chr5_2:70458034-70458053 Msa0785430:intron 35.0%
CAAGAATAATCCATGAAGAG+GGG + chr5_2:70458208-70458227 Msa0785430:CDS 35.0%
TTCTTACGAGCATTACAAGA+AGG + chr5_2:70458302-70458321 Msa0785430:CDS 35.0%
! TTTTATACGTGCAGTTTCTG+AGG + chr5_2:70458397-70458416 Msa0785430:intron 35.0%
TCTCTATTACTTTGCAGTTG+CGG - chr5_2:70458429-70458448 None:intergenic 35.0%
!! TGTATACATTTTGTTGGTGG+TGG + chr5_2:70458468-70458487 Msa0785430:CDS 35.0%
!!! GTATACATTTTGTTGGTGGT+GGG + chr5_2:70458469-70458488 Msa0785430:CDS 35.0%
!! TTTTGGAAACTTGCAAGACT+TGG + chr5_2:70458641-70458660 Msa0785430:intron 35.0%
ACAAACAATTGTCAAGGAAG+AGG + chr5_2:70458814-70458833 Msa0785430:CDS 35.0%
CAAACAATTGTCAAGGAAGA+GGG + chr5_2:70458815-70458834 Msa0785430:CDS 35.0%
TAGTTCCAAGTCCCTTATAA+AGG - chr5_2:70458850-70458869 None:intergenic 35.0%
GAGAAGCTGATTGCTATATT+TGG - chr5_2:70458973-70458992 None:intergenic 35.0%
CGATCTCAAGCTTTCATATA+CGG - chr5_2:70458995-70459014 None:intergenic 35.0%
! ATGAAAGCTTGAGATCGTTT+TGG + chr5_2:70458998-70459017 Msa0785430:CDS 35.0%
! TTCAACTGTTGTTGTTAGTC+TGG + chr5_2:70459150-70459169 Msa0785430:CDS 35.0%
! TTACCTTTTTCCTACATCTC+TGG + chr5_2:70459371-70459390 Msa0785430:intron 35.0%
!! TCACACTTTTCCTGTTTTTC+AGG + chr5_2:70459655-70459674 Msa0785430:intron 35.0%
! CGTCACATAATGTCATTTCT+TGG + chr5_2:70459768-70459787 Msa0785430:intron 35.0%
ATGAACCTATATCATTCCCT+CGG + chr5_2:70459791-70459810 Msa0785430:intron 35.0%
! TACTTGTTCACATGTTTCTG+AGG + chr5_2:70459904-70459923 Msa0785430:intron 35.0%
TTGCTCATGATAAAAGCCAA+TGG + chr5_2:70460006-70460025 Msa0785430:intron 35.0%
GTTGTCAAATGGACAAGATA+TGG - chr5_2:70460315-70460334 None:intergenic 35.0%
GTCCATTTGACAACAAATTG+CGG + chr5_2:70460321-70460340 Msa0785430:intron 35.0%
CACTGGACAATTACATTTAC+AGG - chr5_2:70460397-70460416 None:intergenic 35.0%
TAAATGTAATTGTCCAGTGC+AGG + chr5_2:70460398-70460417 Msa0785430:intron 35.0%
!!! GTTTTGGAATTAGTTCTCAC+TGG + chr5_2:70460513-70460532 Msa0785430:intron 35.0%
! TTTGGAATTAGTTCTCACTG+GGG + chr5_2:70460515-70460534 Msa0785430:intron 35.0%
TAACAGATGAATTCAACCGT+AGG - chr5_2:70460625-70460644 None:intergenic 35.0%
TTCCATTGGATCTTGTTAGA+CGG + chr5_2:70460666-70460685 Msa0785430:CDS 35.0%
CAGGTAAAATTCCTCTGTAA+AGG - chr5_2:70460790-70460809 None:intergenic 35.0%
ATAAAACAAATGCCTACACC+AGG - chr5_2:70460830-70460849 None:intergenic 35.0%
!! AGTTGATGGGTGTAATCATA+CGG - chr5_2:70460894-70460913 None:intergenic 35.0%
ATGATTACACCCATCAACTT+TGG + chr5_2:70460895-70460914 Msa0785430:exon 35.0%
TCTCATTTCCTAGATTCTCA+TGG + chr5_2:70461004-70461023 Msa0785430:three_prime_UTR 35.0%
ATTTCCTAGATTCTCATGGT+TGG + chr5_2:70461008-70461027 Msa0785430:three_prime_UTR 35.0%
TTTCCTAGATTCTCATGGTT+GGG + chr5_2:70461009-70461028 Msa0785430:three_prime_UTR 35.0%
TTGTGAAATCTGTCTCCTTA+AGG - chr5_2:70461197-70461216 None:intergenic 35.0%
GATTTCACAAGTGCATTTGA+AGG + chr5_2:70461207-70461226 Msa0785430:three_prime_UTR 35.0%
! TTGATGTGTGGTGGAATTTG+GGG - chr5_2:70456731-70456750 None:intergenic 40.0%
! CTTGATGTGTGGTGGAATTT+GGG - chr5_2:70456732-70456751 None:intergenic 40.0%
! TCTTGATGTGTGGTGGAATT+TGG - chr5_2:70456733-70456752 None:intergenic 40.0%
GTTTCTTTCTTGATGTGTGG+TGG - chr5_2:70456740-70456759 None:intergenic 40.0%
!! GTGTTGGTAGTGATCTAATG+CGG - chr5_2:70456784-70456803 None:intergenic 40.0%
!! GCTTCAAGAGGAGTGTTTAA+AGG - chr5_2:70456814-70456833 None:intergenic 40.0%
! TAAGAAGGGTTTGCTTCAAG+AGG - chr5_2:70456826-70456845 None:intergenic 40.0%
!! GCGATTCGGTTTGTTCAAAA+CGG - chr5_2:70456857-70456876 None:intergenic 40.0%
GAAGAAGAGAGGGGTAAAAT+TGG + chr5_2:70457003-70457022 Msa0785430:five_prime_UTR 40.0%
AGTCAATCAAAACAGGCACT+AGG + chr5_2:70457925-70457944 Msa0785430:intron 40.0%
! TCAAAACAGGCACTAGGTTT+TGG + chr5_2:70457931-70457950 Msa0785430:intron 40.0%
AATGATTGAGAGAGAGATGG+TGG + chr5_2:70458037-70458056 Msa0785430:intron 40.0%
ATGATTGAGAGAGAGATGGT+GGG + chr5_2:70458038-70458057 Msa0785430:intron 40.0%
! CTTTGAGGAAAGCGAGTATA+TGG + chr5_2:70458175-70458194 Msa0785430:CDS 40.0%
TAATCCATGAAGAGGGGTTT+AGG + chr5_2:70458214-70458233 Msa0785430:CDS 40.0%
AATCCATGAAGAGGGGTTTA+GGG + chr5_2:70458215-70458234 Msa0785430:CDS 40.0%
!! GGTTTAGGGCTTTTTGGAAA+GGG + chr5_2:70458229-70458248 Msa0785430:CDS 40.0%
TGCTACATCTACTTATCCCT+TGG + chr5_2:70458509-70458528 Msa0785430:CDS 40.0%
GGATTACTCGGCCTTTATAA+GGG + chr5_2:70458836-70458855 Msa0785430:CDS 40.0%
!! GATCGTTTTGGATGTCAAAC+AGG + chr5_2:70459010-70459029 Msa0785430:CDS 40.0%
AACAGTTGAATCATCGGATC+TGG - chr5_2:70459140-70459159 None:intergenic 40.0%
ATGCCAGAGATGTAGGAAAA+AGG - chr5_2:70459377-70459396 None:intergenic 40.0%
ACATACAGTTGTTGTAGCAG+TGG - chr5_2:70460206-70460225 None:intergenic 40.0%
GCTACAACAACTGTATGTTC+AGG + chr5_2:70460208-70460227 Msa0785430:intron 40.0%
!! CTCCGCAATTTGTTGTCAAA+TGG - chr5_2:70460326-70460345 None:intergenic 40.0%
TAAGAAAGACAGCACTACAC+AGG - chr5_2:70460367-70460386 None:intergenic 40.0%
TGTGTAGTGCTGTCTTTCTT+AGG + chr5_2:70460366-70460385 Msa0785430:intron 40.0%
CTTGTAGACTAGAATGCCTA+CGG + chr5_2:70460606-70460625 Msa0785430:intron 40.0%
ATATGCAGCAACGTTTCCAT+TGG + chr5_2:70460652-70460671 Msa0785430:intron 40.0%
AGAGACCTGTATTGTACACA+CGG - chr5_2:70460724-70460743 None:intergenic 40.0%
GTGTACAATACAGGTCTCTT+TGG + chr5_2:70460725-70460744 Msa0785430:CDS 40.0%
AAGCATATATTCCGGTCAGA+AGG + chr5_2:70460755-70460774 Msa0785430:CDS 40.0%
GGCACAACCTTATAGTATTC+AGG - chr5_2:70460809-70460828 None:intergenic 40.0%
GAATACTATAAGGTTGTGCC+TGG + chr5_2:70460809-70460828 Msa0785430:CDS 40.0%
AACCATCTTCAGTGTCTCAT+AGG - chr5_2:70460855-70460874 None:intergenic 40.0%
!!! GACACTGAAGATGGTTTTAG+CGG + chr5_2:70460859-70460878 Msa0785430:CDS 40.0%
! GATCAGACTCCAAAGTTGAT+GGG - chr5_2:70460907-70460926 None:intergenic 40.0%
AGATCAGACTCCAAAGTTGA+TGG - chr5_2:70460908-70460927 None:intergenic 40.0%
TGTTGTTCAAGTGTCTGTAC+AGG - chr5_2:70461071-70461090 None:intergenic 40.0%
TACGGGCCAAATGAAAACAA+TGG - chr5_2:70461367-70461386 None:intergenic 40.0%
! TGTGGTGGAATTTGGGGTTA+AGG - chr5_2:70456725-70456744 None:intergenic 45.0%
CGACGTCGCTTAATAGCAAA+AGG + chr5_2:70456882-70456901 Msa0785430:five_prime_UTR 45.0%
ATAGTTCCAATCTGTTGCGG+CGG - chr5_2:70457107-70457126 None:intergenic 45.0%
! ACTATTTCTCAGCTTCTCGC+CGG + chr5_2:70457122-70457141 Msa0785430:CDS 45.0%
AGGATTGTGAGTCTAGCAAG+TGG - chr5_2:70457185-70457204 None:intergenic 45.0%
TGATTGAGAGAGAGATGGTG+GGG + chr5_2:70458039-70458058 Msa0785430:intron 45.0%
!! AAGAGGGGTTTAGGGCTTTT+TGG + chr5_2:70458223-70458242 Msa0785430:CDS 45.0%
!! GGGTTTAGGGCTTTTTGGAA+AGG + chr5_2:70458228-70458247 Msa0785430:CDS 45.0%
!!! ACATTTTGTTGGTGGTGGGT+TGG + chr5_2:70458473-70458492 Msa0785430:CDS 45.0%
CGCGTTCTTACAAGATCCAA+GGG - chr5_2:70458528-70458547 None:intergenic 45.0%
CCTTGGATCTTGTAAGAACG+CGG + chr5_2:70458526-70458545 Msa0785430:CDS 45.0%
GTCAAGGAAGAGGGATTACT+CGG + chr5_2:70458824-70458843 Msa0785430:CDS 45.0%
GGGATTACTCGGCCTTTATA+AGG + chr5_2:70458835-70458854 Msa0785430:CDS 45.0%
AGTGGCTAAGTCCACAAGAA+AGG - chr5_2:70458924-70458943 None:intergenic 45.0%
TTGTGGACTTAGCCACTTAC+TGG + chr5_2:70458927-70458946 Msa0785430:intron 45.0%
TCTGCATTAGCACCAGTAAG+TGG - chr5_2:70458942-70458961 None:intergenic 45.0%
! TGGTGCTAATGCAGACTGTT+GGG + chr5_2:70458947-70458966 Msa0785430:intron 45.0%
! GTTGTTGTTAGTCTGGCTTG+TGG + chr5_2:70459157-70459176 Msa0785430:CDS 45.0%
! TCAGGCATTGCATCATCAAC+AGG + chr5_2:70459187-70459206 Msa0785430:CDS 45.0%
ACACTTGATGCCAGAGATGT+AGG - chr5_2:70459384-70459403 None:intergenic 45.0%
GGAATCAGCTGCATAACTTG+GGG - chr5_2:70459749-70459768 None:intergenic 45.0%
CGGAATCAGCTGCATAACTT+GGG - chr5_2:70459750-70459769 None:intergenic 45.0%
ACGGAATCAGCTGCATAACT+TGG - chr5_2:70459751-70459770 None:intergenic 45.0%
GGTAACCGAGGGAATGATAT+AGG - chr5_2:70459799-70459818 None:intergenic 45.0%
! CTCTCACATTTGGTAACCGA+GGG - chr5_2:70459810-70459829 None:intergenic 45.0%
AAGAGGACACCTCTCACATT+TGG - chr5_2:70459820-70459839 None:intergenic 45.0%
! GTGAGAAGCATACCTCAAAG+AGG - chr5_2:70459837-70459856 None:intergenic 45.0%
TTGAGGTATGCTTCTCACCT+AGG + chr5_2:70459839-70459858 Msa0785430:intron 45.0%
ACATCAGGTGAAGGTAACCT+AGG - chr5_2:70459859-70459878 None:intergenic 45.0%
GGTTACCTTCACCTGATGTT+TGG + chr5_2:70459860-70459879 Msa0785430:intron 45.0%
ACCTTCACCTGATGTTTGGA+CGG + chr5_2:70459864-70459883 Msa0785430:intron 45.0%
CTGATATCCGTCCAAACATC+AGG - chr5_2:70459874-70459893 None:intergenic 45.0%
CAACAACTGTATGTTCAGGC+AGG + chr5_2:70460212-70460231 Msa0785430:intron 45.0%
CTCCGTCTAACAAGATCCAA+TGG - chr5_2:70460671-70460690 None:intergenic 45.0%
CATTGGATCTTGTTAGACGG+AGG + chr5_2:70460669-70460688 Msa0785430:CDS 45.0%
GAGACCTGTATTGTACACAC+GGG - chr5_2:70460723-70460742 None:intergenic 45.0%
TATAAGGTTGTGCCTGGTGT+AGG + chr5_2:70460815-70460834 Msa0785430:CDS 45.0%
GACCTATGAGACACTGAAGA+TGG + chr5_2:70460850-70460869 Msa0785430:CDS 45.0%
TTGCCCAACCATGAGAATCT+AGG - chr5_2:70461015-70461034 None:intergenic 45.0%
! CAACGTTGTAGTGCTACTGT+GGG + chr5_2:70461032-70461051 Msa0785430:three_prime_UTR 45.0%
! AACGTTGTAGTGCTACTGTG+GGG + chr5_2:70461033-70461052 Msa0785430:three_prime_UTR 45.0%
AACTGCAACTCAGTGCCTTA+AGG + chr5_2:70461179-70461198 Msa0785430:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAATGAA+AGG + chr5_2:70461127-70461146 Msa0785430:three_prime_UTR 5.0%
!!! GCGACGTCGTTTTTGCGATT+CGG - chr5_2:70456871-70456890 None:intergenic 50.0%
TGGAGATGCAAACGGAAGCT+AGG + chr5_2:70457030-70457049 Msa0785430:exon 50.0%
GGAGATGCAAACGGAAGCTA+GGG + chr5_2:70457031-70457050 Msa0785430:exon 50.0%
ATGCAAACGGAAGCTAGGGT+TGG + chr5_2:70457035-70457054 Msa0785430:CDS 50.0%
!! GGAAGCTAGGGTTGGTGTAA+CGG + chr5_2:70457043-70457062 Msa0785430:CDS 50.0%
! GATTGAGAGAGAGATGGTGG+GGG + chr5_2:70458040-70458059 Msa0785430:intron 50.0%
AAGCCCTAAACCCCTCTTCA+TGG - chr5_2:70458221-70458240 None:intergenic 50.0%
CCGCGTTCTTACAAGATCCA+AGG - chr5_2:70458529-70458548 None:intergenic 50.0%
CTCGGCCTTTATAAGGGACT+TGG + chr5_2:70458842-70458861 Msa0785430:CDS 50.0%
! CTGGTGCTAATGCAGACTGT+TGG + chr5_2:70458946-70458965 Msa0785430:intron 50.0%
! CCTCTCACATTTGGTAACCG+AGG - chr5_2:70459811-70459830 None:intergenic 50.0%
CCTCGGTTACCAAATGTGAG+AGG + chr5_2:70459808-70459827 Msa0785430:intron 50.0%
!! TGTGAGAGGTGTCCTCTTTG+AGG + chr5_2:70459822-70459841 Msa0785430:intron 50.0%
TCCGTCCAAACATCAGGTGA+AGG - chr5_2:70459868-70459887 None:intergenic 50.0%
TGTATGTTCAGGCAGGCTTG+TGG + chr5_2:70460219-70460238 Msa0785430:intron 50.0%
ACAAATTGCGGAGAGTCTCG+TGG + chr5_2:70460333-70460352 Msa0785430:intron 50.0%
ACAAAGTTGCAAGCCTGCAC+TGG - chr5_2:70460414-70460433 None:intergenic 50.0%
TAGACGGAGGAAGCAACTTG+AGG + chr5_2:70460682-70460701 Msa0785430:CDS 50.0%
AGACGGAGGAAGCAACTTGA+GGG + chr5_2:70460683-70460702 Msa0785430:CDS 50.0%
! GCAACGTTGTAGTGCTACTG+TGG + chr5_2:70461031-70461050 Msa0785430:three_prime_UTR 50.0%
ATGGTGCACAACACTGCAAC+GGG - chr5_2:70461241-70461260 None:intergenic 50.0%
CATGGTGCACAACACTGCAA+CGG - chr5_2:70461242-70461261 None:intergenic 50.0%
!! AGCTAGGGTTGGTGTAACGG+TGG + chr5_2:70457046-70457065 Msa0785430:CDS 55.0%
!! AGGGTTGGTGTAACGGTGGA+CGG + chr5_2:70457050-70457069 Msa0785430:CDS 55.0%
TAACGGTGGACGGTGGTGTT+CGG + chr5_2:70457060-70457079 Msa0785430:CDS 55.0%
ATTTCTCAGCTTCTCGCCGG+AGG + chr5_2:70457125-70457144 Msa0785430:CDS 55.0%
! GGTGGGGGTACAGGTTATTG+AGG + chr5_2:70458055-70458074 Msa0785430:intron 55.0%
!! TTTGTTGGTGGTGGGTTGGC+AGG + chr5_2:70458477-70458496 Msa0785430:CDS 55.0%
GGGACTTGGAACTACCCTCT+TGG + chr5_2:70458856-70458875 Msa0785430:CDS 55.0%
! CTGGCTTGTGGCAGTCTTTC+AGG + chr5_2:70459169-70459188 Msa0785430:CDS 55.0%
!! TCTGGTTCTAGGGGTCAGTC+TGG - chr5_2:70459573-70459592 None:intergenic 55.0%
TGACCCCTAGAACCAGAGAC+CGG + chr5_2:70459576-70459595 Msa0785430:intron 55.0%
!! ATCCCGGTCTCTGGTTCTAG+GGG - chr5_2:70459582-70459601 None:intergenic 55.0%
!! CATCCCGGTCTCTGGTTCTA+GGG - chr5_2:70459583-70459602 None:intergenic 55.0%
AACAACTCCATCCCGGTCTC+TGG - chr5_2:70459591-70459610 None:intergenic 55.0%
GACGGAGGAAGCAACTTGAG+GGG + chr5_2:70460684-70460703 Msa0785430:CDS 55.0%
ACGGAGGAAGCAACTTGAGG+GGG + chr5_2:70460685-70460704 Msa0785430:CDS 55.0%
CGAGCCCGTGTGTACAATAC+AGG + chr5_2:70460716-70460735 Msa0785430:CDS 55.0%
TTCCGGTCAGAAGGTTTGCG+TGG + chr5_2:70460764-70460783 Msa0785430:CDS 55.0%
GGTTTGCGTGGCCTTTACAG+AGG + chr5_2:70460776-70460795 Msa0785430:CDS 55.0%
GTTGGTGTAACGGTGGACGG+TGG + chr5_2:70457053-70457072 Msa0785430:CDS 60.0%
CAACCACCGCCGCAACAGAT+TGG + chr5_2:70457098-70457117 Msa0785430:CDS 60.0%
GTTCCAATCTGTTGCGGCGG+TGG - chr5_2:70457104-70457123 None:intergenic 60.0%
CAAAGCTCCGGCAACTCCTC+CGG - chr5_2:70457144-70457163 None:intergenic 60.0%
!! GAGAGAGATGGTGGGGGTAC+AGG + chr5_2:70458046-70458065 Msa0785430:intron 60.0%
!! AAGAACGCGGCTTGCTGCAC+AGG + chr5_2:70458539-70458558 Msa0785430:CDS 60.0%
GACCCCTAGAACCAGAGACC+GGG + chr5_2:70459577-70459596 Msa0785430:intron 60.0%
!! CCATCCCGGTCTCTGGTTCT+AGG - chr5_2:70459584-70459603 None:intergenic 60.0%
CCTAGAACCAGAGACCGGGA+TGG + chr5_2:70459581-70459600 Msa0785430:intron 60.0%
AGGAAGCAACTTGAGGGGGC+TGG + chr5_2:70460689-70460708 Msa0785430:CDS 60.0%
AAGCAACTTGAGGGGGCTGG+TGG + chr5_2:70460692-70460711 Msa0785430:CDS 60.0%
! AGCAACTTGAGGGGGCTGGT+GGG + chr5_2:70460693-70460712 Msa0785430:CDS 60.0%
GGCCACGCAAACCTTCTGAC+CGG - chr5_2:70460769-70460788 None:intergenic 60.0%
GCACAACACTGCAACGGGAC+TGG - chr5_2:70461236-70461255 None:intergenic 60.0%
CTTCTCGCCGGAGGAGTTGC+CGG + chr5_2:70457134-70457153 Msa0785430:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 70456722 70461510 70456722 ID=Msa0785430;Name=Msa0785430
chr5_2 mRNA 70456722 70461510 70456722 ID=Msa0785430-mRNA-1;Parent=Msa0785430;Name=Msa0785430-mRNA-1;_AED=0.23;_eAED=0.23;_QI=313|1|1|1|1|1|7|612|327
chr5_2 exon 70456722 70457211 70456722 ID=Msa0785430-mRNA-1:exon:21227;Parent=Msa0785430-mRNA-1
chr5_2 exon 70458147 70458323 70458147 ID=Msa0785430-mRNA-1:exon:21228;Parent=Msa0785430-mRNA-1
chr5_2 exon 70458411 70458560 70458411 ID=Msa0785430-mRNA-1:exon:21229;Parent=Msa0785430-mRNA-1
chr5_2 exon 70458776 70458877 70458776 ID=Msa0785430-mRNA-1:exon:21230;Parent=Msa0785430-mRNA-1
chr5_2 exon 70458961 70459031 70458961 ID=Msa0785430-mRNA-1:exon:21231;Parent=Msa0785430-mRNA-1
chr5_2 exon 70459141 70459208 70459141 ID=Msa0785430-mRNA-1:exon:21232;Parent=Msa0785430-mRNA-1
chr5_2 exon 70460660 70461510 70460660 ID=Msa0785430-mRNA-1:exon:21233;Parent=Msa0785430-mRNA-1
chr5_2 five_prime_UTR 70456722 70457034 70456722 ID=Msa0785430-mRNA-1:five_prime_utr;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70457035 70457211 70457035 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70458147 70458323 70458147 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70458411 70458560 70458411 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70458776 70458877 70458776 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70458961 70459031 70458961 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70459141 70459208 70459141 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 CDS 70460660 70460898 70460660 ID=Msa0785430-mRNA-1:cds;Parent=Msa0785430-mRNA-1
chr5_2 three_prime_UTR 70460899 70461510 70460899 ID=Msa0785430-mRNA-1:three_prime_utr;Parent=Msa0785430-mRNA-1
Gene Sequence

>Msa0785430

ATGCAAACGGAAGCTAGGGTTGGTGTAACGGTGGACGGTGGTGTTCGGAAGTTAGTTAAACAACAACCACCGCCGCAACAGATTGGAACTATTTCTCAGCTTCTCGCCGGAGGAGTTGCCGGAGCTTTGAGTAAAACTTGTACTGCGCCACTTGCTAGACTCACAATCCTTTTTCAGATTCAAGGGATGCATTCTAATGTTGCAACTTTGAGGAAAGCGAGTATATGGAATGAAGCTTCAAGAATAATCCATGAAGAGGGGTTTAGGGCTTTTTGGAAAGGGAATCTAGTTACAATTGCTCACCGTTTACCTTACTCTTCTGTTAACTTTTATTCTTACGAGCATTACAAGAAGTTTCTGAGGACGATTCCGCAACTGCAAAGTAATAGAGATAATATCAGTGCAGATCTTTGTATACATTTTGTTGGTGGTGGGTTGGCAGGCATAACTGCTGCTACATCTACTTATCCCTTGGATCTTGTAAGAACGCGGCTTGCTGCACAGACGAATTTTACTTACTATAGAGGTATTGGACATGCTTTACAAACAATTGTCAAGGAAGAGGGATTACTCGGCCTTTATAAGGGACTTGGAACTACCCTCTTGACTGTTGGGCCAAATATAGCAATCAGCTTCTCCGTATATGAAAGCTTGAGATCGTTTTGGATGTCAAACAGATCCGATGATTCAACTGTTGTTGTTAGTCTGGCTTGTGGCAGTCTTTCAGGCATTGCATCATCAACAGCAACGTTTCCATTGGATCTTGTTAGACGGAGGAAGCAACTTGAGGGGGCTGGTGGGCGAGCCCGTGTGTACAATACAGGTCTCTTTGGTACATTCAAGCATATATTCCGGTCAGAAGGTTTGCGTGGCCTTTACAGAGGAATTTTACCTGAATACTATAAGGTTGTGCCTGGTGTAGGCATTTGTTTTATGACCTATGAGACACTGAAGATGGTTTTAGCGGAGATTACTACCGTATGA
Protein sequence

>Msa0785430

MQTEARVGVTVDGGVRKLVKQQPPPQQIGTISQLLAGGVAGALSKTCTAPLARLTILFQIQGMHSNVATLRKASIWNEASRIIHEEGFRAFWKGNLVTIAHRLPYSSVNFYSYEHYKKFLRTIPQLQSNRDNISADLCIHFVGGGLAGITAATSTYPLDLVRTRLAAQTNFTYYRGIGHALQTIVKEEGLLGLYKGLGTTLLTVGPNIAISFSVYESLRSFWMSNRSDDSTVVVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYNTGLFGTFKHIFRSEGLRGLYRGILPEYYKVVPGVGICFMTYETLKMVLAEITTV*