AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0793500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0793500 MtrunA17_Chr5g0394391 97.902 572 12 0 1 572 1 572 0.0 1154
Msa0793500 MtrunA17_Chr4g0064621 61.345 595 201 8 1 571 101 690 0.0 667
Msa0793500 MtrunA17_Chr4g0060241 57.041 561 206 13 19 569 10 545 0.0 575
Msa0793500 MtrunA17_Chr5g0442171 85.152 330 41 2 190 518 1 323 0.0 568
Msa0793500 MtrunA17_Chr7g0223181 37.228 505 290 10 29 523 9 496 4.02e-99 314
Msa0793500 MtrunA17_Chr7g0223291 37.426 505 289 10 29 523 9 496 1.20e-98 313
Msa0793500 MtrunA17_Chr5g0442161 83.140 172 28 1 8 178 7 178 1.42e-98 297
Msa0793500 MtrunA17_Chr4g0073741 36.853 502 296 10 29 523 8 495 1.45e-98 313
Msa0793500 MtrunA17_Chr4g0031321 36.634 505 293 10 29 523 9 496 4.44e-97 309
Msa0793500 MtrunA17_Chr7g0262821 36.170 517 279 11 29 523 9 496 8.38e-97 308
Msa0793500 MtrunA17_Chr4g0031301 36.832 505 292 10 29 523 9 496 1.10e-96 308
Msa0793500 MtrunA17_Chr2g0298851 35.509 521 292 14 29 530 9 504 5.10e-88 284
Msa0793500 MtrunA17_Chr2g0296391 35.798 514 300 12 29 530 9 504 1.51e-87 281
Msa0793500 MtrunA17_Chr8g0350731 34.328 536 320 14 8 531 16 531 2.16e-87 284
Msa0793500 MtrunA17_Chr7g0223721 34.308 513 308 12 29 530 9 503 7.44e-87 281
Msa0793500 MtrunA17_Chr7g0233311 36.078 510 306 10 29 531 9 505 2.05e-86 280
Msa0793500 MtrunA17_Chr2g0293581 35.897 507 295 13 29 523 10 498 8.45e-86 278
Msa0793500 MtrunA17_Chr7g0223851 36.078 510 303 13 29 530 18 512 9.10e-86 279
Msa0793500 MtrunA17_Chr7g0223621 33.704 540 328 13 29 557 9 529 2.91e-85 277
Msa0793500 MtrunA17_Chr7g0223781 33.640 544 323 14 29 554 9 532 1.38e-84 275
Msa0793500 MtrunA17_Chr8g0388761 33.648 529 302 12 14 523 24 522 6.25e-84 275
Msa0793500 MtrunA17_Chr7g0223801 34.291 522 316 13 28 539 8 512 6.32e-84 273
Msa0793500 MtrunA17_Chr2g0284681 33.138 513 306 11 29 523 8 501 1.87e-83 272
Msa0793500 MtrunA17_Chr8g0388671 33.397 527 302 12 16 523 26 522 3.27e-83 273
Msa0793500 MtrunA17_Chr7g0223711 34.653 505 305 11 28 523 8 496 6.60e-83 271
Msa0793500 MtrunA17_Chr7g0225671 35.534 515 298 17 29 530 16 509 1.64e-82 270
Msa0793500 MtrunA17_Chr7g0221661 35.714 504 299 11 29 523 9 496 1.55e-81 267
Msa0793500 MtrunA17_Chr5g0427901 35.135 518 294 15 29 523 9 507 1.46e-80 265
Msa0793500 MtrunA17_Chr7g0223741 33.789 512 314 11 29 531 9 504 2.15e-80 264
Msa0793500 MtrunA17_Chr2g0287631 36.505 515 297 12 28 530 8 504 8.11e-80 263
Msa0793500 MtrunA17_Chr7g0223821 35.465 516 297 17 29 529 9 503 1.03e-79 265
Msa0793500 MtrunA17_Chr7g0223751 33.270 523 317 14 29 539 9 511 2.41e-79 262
Msa0793500 MtrunA17_Chr2g0298861 33.141 519 318 14 30 531 10 516 3.68e-79 261
Msa0793500 MtrunA17_Chr7g0223731 33.268 514 313 15 29 531 9 503 5.67e-78 258
Msa0793500 MtrunA17_Chr7g0233301 34.638 511 281 13 29 531 9 474 2.59e-76 253
Msa0793500 MtrunA17_Chr4g0040931 33.399 506 308 13 29 523 9 496 3.42e-76 253
Msa0793500 MtrunA17_Chr7g0223631 34.357 521 302 14 28 539 8 497 6.63e-76 252
Msa0793500 MtrunA17_Chr6g0462681 31.898 511 308 11 27 521 7 493 7.00e-76 254
Msa0793500 MtrunA17_Chr6g0462601 32.495 517 301 14 27 523 7 495 3.15e-75 251
Msa0793500 MtrunA17_Chr7g0248151 35.078 516 302 17 29 531 9 504 3.38e-74 248
Msa0793500 MtrunA17_Chr7g0223831 34.698 513 278 16 29 530 9 475 3.62e-74 247
Msa0793500 MtrunA17_Chr7g0223031 33.074 514 314 14 29 531 9 503 5.00e-74 247
Msa0793500 MtrunA17_Chr7g0223541 36.986 438 249 11 96 523 33 453 1.23e-72 243
Msa0793500 MtrunA17_Chr6g0462771 32.277 505 319 12 27 521 7 498 3.45e-72 243
Msa0793500 MtrunA17_Chr4g0012541 32.617 512 309 13 29 530 9 494 9.86e-72 241
Msa0793500 MtrunA17_Chr7g0248131 33.977 518 307 17 29 531 9 506 2.99e-71 240
Msa0793500 MtrunA17_Chr6g0462641 33.268 508 310 14 27 521 7 498 6.32e-71 241
Msa0793500 MtrunA17_Chr2g0279901 31.141 517 293 11 30 523 57 533 4.11e-70 238
Msa0793500 MtrunA17_Chr7g0223701 32.233 515 312 12 28 523 8 504 1.37e-69 236
Msa0793500 MtrunA17_Chr4g0049501 30.000 530 299 12 22 523 46 531 3.51e-69 236
Msa0793500 MtrunA17_Chr6g0462711 32.759 522 295 16 27 521 8 500 5.17e-69 235
Msa0793500 MtrunA17_Chr7g0217971 32.745 510 295 13 29 530 9 478 9.18e-69 233
Msa0793500 MtrunA17_Chr7g0215261 33.592 515 275 18 29 530 9 469 1.61e-68 232
Msa0793500 MtrunA17_Chr7g0223681 34.987 383 237 6 143 523 34 406 9.49e-67 226
Msa0793500 MtrunA17_Chr2g0293601 31.881 505 282 14 28 521 8 461 4.59e-64 218
Msa0793500 MtrunA17_Chr6g0462611 32.401 429 276 8 96 521 24 441 5.48e-64 221
Msa0793500 MtrunA17_Chr2g0277021 32.157 510 305 16 27 523 69 550 8.17e-62 216
Msa0793500 MtrunA17_Chr8g0390821 30.104 578 285 19 27 530 9 541 2.35e-60 211
Msa0793500 MtrunA17_Chr7g0228281 31.128 514 278 16 29 530 70 519 3.52e-57 202
Msa0793500 MtrunA17_Chr2g0293561 33.952 377 231 9 28 397 8 373 1.06e-55 192
Msa0793500 MtrunA17_Chr2g0299821 30.063 479 290 15 30 486 10 465 5.75e-55 193
Msa0793500 MtrunA17_Chr2g0331381 33.333 441 236 16 30 457 7 402 2.20e-53 189
Msa0793500 MtrunA17_Chr2g0299791 33.753 397 233 12 29 414 1042 1419 8.58e-53 194
Msa0793500 MtrunA17_Chr6g0462861 29.600 500 310 14 29 521 9 473 1.07e-52 190
Msa0793500 MtrunA17_Chr2g0299921 32.836 402 224 10 29 411 1029 1403 9.79e-52 191
Msa0793500 MtrunA17_Chr2g0299921 33.248 391 214 11 29 399 1413 1776 1.21e-50 188
Msa0793500 MtrunA17_Chr2g0299851 31.888 392 245 10 29 413 1038 1414 1.39e-47 179
Msa0793500 MtrunA17_Chr2g0299881 32.242 397 241 11 30 414 1039 1419 6.98e-47 177
Msa0793500 MtrunA17_Chr4g0064651 67.480 123 40 0 395 517 1 123 2.45e-45 156
Msa0793500 MtrunA17_Chr7g0245531 39.713 209 121 3 328 535 1 205 1.10e-40 150
Msa0793500 MtrunA17_Chr2g0293271 29.399 449 229 12 41 483 43 409 3.97e-40 150
Msa0793500 MtrunA17_Chr4g0057741 61.947 113 41 1 234 344 1 113 1.42e-38 137
Msa0793500 MtrunA17_Chr1g0151991 34.256 289 167 9 29 308 9 283 1.53e-38 143
Msa0793500 MtrunA17_Chr1g0166551 25.301 498 243 12 29 521 5 378 1.62e-34 137
Msa0793500 MtrunA17_Chr7g0245521 32.143 280 169 8 28 300 8 273 1.63e-34 131
Msa0793500 MtrunA17_Chr1g0152001 38.542 192 111 5 340 530 2 187 9.33e-34 130
Msa0793500 MtrunA17_Chr4g0057751 53.846 104 48 0 118 221 1 104 5.57e-29 110
Msa0793500 MtrunA17_Chr1g0188611 36.216 185 113 3 348 531 3 183 7.81e-28 113
Msa0793500 MtrunA17_Chr4g0004331 25.316 474 315 11 30 476 4 465 1.80e-27 117
Msa0793500 MtrunA17_Chr3g0098761 25.799 438 291 13 30 455 4 419 5.84e-26 112
Msa0793500 MtrunA17_Chr7g0223761 33.161 193 117 6 270 456 7 193 1.66e-25 107
Msa0793500 MtrunA17_Chr5g0394221 32.995 197 124 3 329 523 75 265 4.65e-25 107
Msa0793500 MtrunA17_Chr4g0064661 57.143 84 32 2 95 177 1 81 1.14e-23 95.1
Msa0793500 MtrunA17_Chr2g0331901 23.608 449 312 10 30 461 4 438 2.51e-23 104
Msa0793500 MtrunA17_Chr6g0462751 25.348 359 196 12 82 436 11 301 3.46e-22 97.8
Msa0793500 MtrunA17_Chr5g0444001 24.719 445 301 13 30 459 4 429 3.81e-22 100
Msa0793500 MtrunA17_Chr7g0223771 33.557 149 91 3 126 273 14 155 1.75e-21 91.7
Msa0793500 MtrunA17_Chr5g0442181 85.106 47 7 0 526 572 1 47 2.12e-21 87.4
Msa0793500 MtrunA17_Chr7g0223671 31.633 196 121 5 86 279 4 188 2.68e-21 92.4
Msa0793500 MtrunA17_Chr6g0462631 23.739 337 204 8 108 440 8 295 3.33e-21 94.4
Msa0793500 MtrunA17_Chr6g0462691 35.461 141 90 1 348 488 3 142 5.18e-19 84.3
Msa0793500 MtrunA17_Chr3g0120101 22.846 499 313 15 23 479 20 488 2.36e-18 89.4
Msa0793500 MtrunA17_Chr1g0188601 30.481 187 115 4 126 307 15 191 2.77e-18 83.6
Msa0793500 MtrunA17_Chr7g0245541 46.667 90 47 1 446 535 4 92 1.72e-16 78.2
Msa0793500 MtrunA17_Chr4g0046881 35.075 134 76 4 158 290 17 140 5.68e-16 75.5
Msa0793500 MtrunA17_Chr6g0462791 32.168 143 89 2 134 275 7 142 3.54e-15 73.9
Msa0793500 MtrunA17_Chr7g0223861 36.364 121 75 2 95 214 1 120 5.48e-15 72.0
Msa0793500 MtrunA17_Chr4g0046871 39.000 100 57 2 363 461 9 105 2.07e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0793500 AT2G32120.1 73.684 570 136 2 5 571 3 561 0.0 896
Msa0793500 AT2G32120.2 73.684 570 136 2 5 571 3 561 0.0 896
Msa0793500 AT3G12580.1 37.426 505 289 10 29 523 9 496 3.00e-102 323
Msa0793500 AT5G02500.1 37.030 505 291 10 29 523 9 496 1.56e-99 316
Msa0793500 AT3G09440.1 37.228 505 290 10 29 523 9 496 2.44e-98 313
Msa0793500 AT3G09440.4 37.228 505 290 10 29 523 9 496 2.44e-98 313
Msa0793500 AT3G09440.2 37.228 505 290 10 29 523 9 496 2.44e-98 313
Msa0793500 AT3G09440.3 37.228 505 290 10 29 523 9 496 2.44e-98 313
Msa0793500 AT1G16030.1 36.047 516 285 10 27 523 6 495 4.80e-98 311
Msa0793500 AT1G56410.1 37.030 505 291 10 29 523 9 496 7.26e-95 303
Msa0793500 AT5G02490.1 35.842 505 297 10 29 523 9 496 2.17e-94 302
Msa0793500 AT1G09080.2 34.469 499 306 8 30 523 43 525 6.47e-86 280
Msa0793500 AT1G09080.1 34.469 499 306 8 30 523 53 535 6.98e-86 281
Msa0793500 AT5G42020.1 33.074 514 321 10 16 523 25 521 2.53e-84 276
Msa0793500 AT5G42020.3 33.074 514 321 10 16 523 30 526 4.53e-84 276
Msa0793500 AT5G28540.1 33.600 500 310 9 30 523 38 521 4.07e-83 273
Msa0793500 AT5G42020.2 33.268 511 317 11 16 519 25 518 4.48e-83 271
Msa0793500 AT5G09590.1 30.651 522 306 10 22 523 52 537 3.56e-67 231
Msa0793500 AT4G37910.1 30.857 525 301 11 22 523 47 532 4.26e-64 223
Msa0793500 AT4G37910.2 30.857 525 301 11 22 523 47 532 4.26e-64 223
Msa0793500 AT5G02500.2 34.097 393 239 8 29 414 9 388 4.06e-63 216
Msa0793500 AT5G49910.1 31.299 508 312 14 27 523 78 559 1.53e-60 213
Msa0793500 AT4G24280.1 31.434 509 310 15 27 523 78 559 2.89e-59 210
Msa0793500 AT1G11660.4 26.464 461 305 16 30 476 4 444 2.37e-27 117
Msa0793500 AT1G11660.3 26.464 461 305 16 30 476 4 444 2.37e-27 117
Msa0793500 AT1G11660.1 26.464 461 305 16 30 476 4 444 2.37e-27 117
Msa0793500 AT1G79930.2 24.944 449 306 10 30 461 4 438 5.66e-26 113
Msa0793500 AT1G79930.1 24.944 449 306 10 30 461 4 438 6.13e-26 113
Msa0793500 AT1G11660.2 27.250 400 259 15 91 476 26 407 5.60e-24 107
Msa0793500 AT1G79920.1 24.499 449 308 10 30 461 4 438 8.26e-24 106
Msa0793500 AT1G79920.3 24.499 449 308 10 30 461 4 438 9.95e-24 106
Msa0793500 AT1G79920.2 24.499 449 308 10 30 461 4 438 9.95e-24 106
Msa0793500 AT1G79920.4 24.499 449 308 10 30 461 4 438 9.95e-24 106
Msa0793500 AT4G16660.1 25.000 360 237 10 143 480 140 488 4.09e-19 92.0
Msa0793500 AT4G16660.2 25.000 360 237 10 143 480 164 512 4.27e-19 92.0

Find 162 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGGATATTTCAAGATAA+TGG 0.182846 5_3:+5469740 Msa0793500:CDS
TGGCACCATAGGTCCTATTT+AGG 0.200225 5_3:-5469941 None:intergenic
AGAAGTCCTTGCAATGTTTC+TGG 0.201625 5_3:+5468705 Msa0793500:CDS
TCCATGCACACACTGATTTC+AGG 0.246998 5_3:-5469789 None:intergenic
TTCACTAACGCAGCAATAAA+TGG 0.261599 5_3:-5468655 None:intergenic
CAGTGATCCCTTTGGAAACT+TGG 0.262026 5_3:+5469521 Msa0793500:CDS
TCAATTCCAATCGCTATTTC+AGG 0.266817 5_3:-5468352 None:intergenic
GTGGTGTTCCTTGGAATTAC+AGG 0.282170 5_3:-5469609 None:intergenic
CTGATTTCAGGAACTCCTTT+TGG 0.283375 5_3:-5469777 None:intergenic
TTCAAAGACGAAGCTCCTTC+TGG 0.283594 5_3:+5468475 Msa0793500:CDS
GAAAGCTTCTCAAGAAACTA+TGG 0.285521 5_3:+5468918 Msa0793500:CDS
TGTTCAGGTTGATGTAGATT+TGG 0.316072 5_3:+5469212 Msa0793500:CDS
CTATGGTGCCACAATGGATT+TGG 0.318656 5_3:+5469953 Msa0793500:CDS
AACATTGCAAGGACTTCTTC+TGG 0.325894 5_3:-5468700 None:intergenic
AAATGTGGTGCTTACTGTTC+CGG 0.327314 5_3:+5468774 Msa0793500:CDS
TTAGGATATTTCAAGATAAT+GGG 0.332403 5_3:+5469741 Msa0793500:CDS
ACAGCAGTGGCGTTATTATA+TGG 0.334823 5_3:+5468883 Msa0793500:CDS
ATAGCGATTGGAATTGATAT+TGG 0.340874 5_3:+5468358 Msa0793500:CDS
TAACAGGCACCACAGGTATA+CGG 0.347738 5_3:-5469866 None:intergenic
GGCACCATAGGTCCTATTTA+GGG 0.356331 5_3:-5469940 None:intergenic
TACCATCGGTGGAGAAGATT+TGG 0.359082 5_3:+5469053 Msa0793500:CDS
GCATCTGACACTGAAACAAC+TGG 0.369251 5_3:+5468307 Msa0793500:CDS
GTTCAGGTTGATGTAGATTT+GGG 0.369664 5_3:+5469213 Msa0793500:CDS
GGCATCCTCACTTCCATAAC+AGG 0.369992 5_3:-5469882 None:intergenic
AACGCCACTGCTGTTGGTTC+AGG 0.370548 5_3:-5468874 None:intergenic
ATCAACCTGAACACTGCTTT+GGG 0.377089 5_3:-5469202 None:intergenic
ATGGAAGGAGCTGTTGCTTC+AGG 0.378268 5_3:+5469495 Msa0793500:CDS
CATCAACCTGAACACTGCTT+TGG 0.383070 5_3:-5469203 None:intergenic
TTCCACCCAAAGCAGTGTTC+AGG 0.388302 5_3:+5469197 Msa0793500:CDS
GTAAGCACCACATTTCTTAT+CGG 0.392583 5_3:-5468766 None:intergenic
CACGACCATGAGATGCTGTT+TGG 0.393050 5_3:+5468520 Msa0793500:CDS
TCGCACAAGCACGCTCTAAA+CGG 0.395103 5_3:-5468822 None:intergenic
TATACCTGTGGTGCCTGTTA+TGG 0.395756 5_3:+5469869 Msa0793500:CDS
CATGTAAACATTGGATGATA+AGG 0.397163 5_3:-5469317 None:intergenic
TCCAAGGTCTGCACCAGAAA+TGG 0.397431 5_3:-5468619 None:intergenic
GCAGAAGAAAACCACTTGTT+AGG 0.403341 5_3:+5469723 Msa0793500:CDS
TGGCTGGTCTTCATGTTCTC+AGG 0.414478 5_3:+5468845 Msa0793500:CDS
TTATAAAGGTATAAACCCTT+TGG 0.418915 5_3:+5469449 Msa0793500:CDS
AAAATAACAGAAGTTTATAA+AGG 0.432441 5_3:+5469435 Msa0793500:CDS
CATGATGCAAAGGTAGAAGT+TGG 0.434870 5_3:+5469336 Msa0793500:CDS
CCTTTGGAAGGTGCGGTTTG+TGG 0.435575 5_3:+5469465 Msa0793500:CDS
CACGCTCTAAACGGGTCAGC+TGG 0.440361 5_3:-5468813 None:intergenic
GGTGTGCTGAGGCCCTAAAT+AGG 0.444919 5_3:+5469928 Msa0793500:CDS
GCCATTTCTGGTGCAGACCT+TGG 0.447888 5_3:+5468618 Msa0793500:CDS
ATGATGCAAAGGTAGAAGTT+GGG 0.448859 5_3:+5469337 Msa0793500:CDS
GCTGGCATTGTGGTGTTCCT+TGG 0.449119 5_3:-5469618 None:intergenic
ATCAATTTATGCCTTCTTGA+GGG 0.450343 5_3:-5469979 None:intergenic
CTGCGTTAGTGAACAATGTC+TGG 0.455549 5_3:+5468665 Msa0793500:CDS
TCAGGCATCAGTGATCCCTT+TGG 0.456587 5_3:+5469513 Msa0793500:CDS
TGTTGACAGGGCGGAGTTTG+AGG 0.457797 5_3:+5469260 Msa0793500:CDS
CTGGTGCAGACCTTGGACAT+TGG 0.457903 5_3:+5468625 Msa0793500:CDS
GCCATTGGAATTCGAGCTGA+TGG 0.458770 5_3:+5469573 Msa0793500:CDS
AAAATATATTCAAGCGTCAT+GGG 0.460640 5_3:+5469112 Msa0793500:CDS
ATAAATGATGTGATACTTGT+TGG 0.460986 5_3:+5469363 Msa0793500:CDS
CGCACAAGCACGCTCTAAAC+GGG 0.463935 5_3:-5468821 None:intergenic
GTAACAAGATTCTCCACCCT+TGG 0.466538 5_3:-5469402 None:intergenic
GAGCGTGCTTGTGCGATGGC+TGG 0.467592 5_3:+5468829 Msa0793500:CDS
TTAGCCGGTGTTGTGATGCC+TGG 0.471501 5_3:+5469840 Msa0793500:CDS
TGGAAACGACTGAATGAAAC+CGG 0.482736 5_3:-5468793 None:intergenic
CAAGCCACTCCTCTTGCCAT+TGG 0.482744 5_3:+5469558 Msa0793500:CDS
CCAATCGCTATTTCAGGAAG+AGG 0.484412 5_3:-5468346 None:intergenic
GTTGATGTAGATTTGGGAGA+TGG 0.485617 5_3:+5469219 Msa0793500:CDS
TATAATAACGCCACTGCTGT+TGG 0.489694 5_3:-5468880 None:intergenic
GGTCAAAGAAATTAAATCAA+TGG 0.491607 5_3:+5469134 Msa0793500:CDS
TAACAAGATTCTCCACCCTT+GGG 0.492275 5_3:-5469401 None:intergenic
GAAAATATATTCAAGCGTCA+TGG 0.496398 5_3:+5469111 Msa0793500:CDS
CAAATCCATTGTGGCACCAT+AGG 0.497810 5_3:-5469952 None:intergenic
AAAGCTGATGAATTGCATCC+TGG 0.503417 5_3:-5469176 None:intergenic
CCTCTTCCTGAAATAGCGAT+TGG 0.506297 5_3:+5468346 Msa0793500:CDS
GTTGCTGTGACTGCTACCGC+CGG 0.506470 5_3:+5468997 Msa0793500:CDS
TTGCTGTGACTGCTACCGCC+GGG 0.511136 5_3:+5468998 Msa0793500:CDS
AACAAGTCCAAGTTTCCAAA+GGG 0.511681 5_3:-5469528 None:intergenic
AGATATGCAAGGTTGTTGAC+AGG 0.512232 5_3:+5469247 Msa0793500:CDS
TATCAATTTATGCCTTCTTG+AGG 0.516603 5_3:-5469980 None:intergenic
AACAGGCACCACAGGTATAC+GGG 0.517047 5_3:-5469865 None:intergenic
GGAATACCTGCAGCACCAAA+AGG 0.524506 5_3:+5469762 Msa0793500:CDS
CAAACAGCATCTCATGGTCG+TGG 0.528773 5_3:-5468519 None:intergenic
CACAAACCGCACCTTCCAAA+GGG 0.529952 5_3:-5469464 None:intergenic
TTCAATATGAAACGCTTGAT+CGG 0.530493 5_3:+5468553 Msa0793500:CDS
CCTTTGCATCATGTAAACAT+TGG 0.531721 5_3:-5469326 None:intergenic
GAGGCCCTAAATAGGACCTA+TGG 0.533257 5_3:+5469936 Msa0793500:CDS
TGCGGTTTGTGGTGCAGCAA+TGG 0.533347 5_3:+5469476 Msa0793500:CDS
ACCACAGGTATACGGGATCC+AGG 0.535468 5_3:-5469858 None:intergenic
TCCTGAAATCAGTGTGTGCA+TGG 0.540172 5_3:+5469788 Msa0793500:CDS
TCTTGAAATATCCTAACAAG+TGG 0.545629 5_3:-5469734 None:intergenic
AAAAGTAGATCTTTACGTGC+TGG 0.548488 5_3:-5469636 None:intergenic
AACCTGAACACTGCTTTGGG+TGG 0.551609 5_3:-5469199 None:intergenic
AAGGACTTCTTCTGGAGTGG+TGG 0.559811 5_3:-5468692 None:intergenic
TGCAAGGACTTCTTCTGGAG+TGG 0.559852 5_3:-5468695 None:intergenic
TCCCAGATAAAAGCATTGGC+AGG 0.560848 5_3:+5469027 Msa0793500:CDS
TCAGATGCAACGGTATATGC+AGG 0.561483 5_3:-5468292 None:intergenic
TCTCAAGAAACTATGGGCAG+TGG 0.563843 5_3:+5468925 Msa0793500:CDS
GGATTTGGTTACCCTCAAGA+AGG 0.565408 5_3:+5469968 Msa0793500:CDS
AACCAAATCTTCTCCACCGA+TGG 0.568389 5_3:-5469055 None:intergenic
TGGACGAACGCCAATGTCCA+AGG 0.570950 5_3:-5468635 None:intergenic
GTACGAAGGTGAGGGAAAGA+AGG 0.571023 5_3:+5469701 Msa0793500:CDS
TTTAGAGCGTGCTTGTGCGA+TGG 0.572607 5_3:+5468825 Msa0793500:CDS
TGTTTCAGTGTCAGATGCAA+CGG 0.575439 5_3:-5468302 None:intergenic
GATACTTGTGTACGAAGGTG+AGG 0.578994 5_3:+5469692 Msa0793500:CDS
CATCTGACACTGAAACAACT+GGG 0.581100 5_3:+5468308 Msa0793500:CDS
AAAGGTATAAACCCTTTGGA+AGG 0.581870 5_3:+5469453 Msa0793500:CDS
CCCATCAGCTCGAATTCCAA+TGG 0.583989 5_3:-5469574 None:intergenic
TAACAAGTCCAAGTTTCCAA+AGG 0.584586 5_3:-5469529 None:intergenic
GAGGATGTTCTTATATCCCA+AGG 0.584781 5_3:+5469385 Msa0793500:CDS
CCATGACCATCATCAACCAT+TGG 0.585720 5_3:-5469903 None:intergenic
AGTCCTTGCAATGTTTCTGG+TGG 0.586924 5_3:+5468708 Msa0793500:CDS
AAGCTGATGAATTGCATCCT+GGG 0.587754 5_3:-5469175 None:intergenic
AGTATCCCAGATAAAAGCAT+TGG 0.589832 5_3:+5469023 Msa0793500:CDS
ATTGCTTCGAGTTGCAACCC+AGG 0.590200 5_3:+5469158 Msa0793500:CDS
CCACAAACCGCACCTTCCAA+AGG 0.591096 5_3:-5469465 None:intergenic
TGTAGTGTTGCTGTGTGGAA+TGG 0.591608 5_3:+5468391 Msa0793500:CDS
TGATGCAAAGGTAGAAGTTG+GGG 0.591780 5_3:+5469338 Msa0793500:CDS
ACTTCCATAACAGGCACCAC+AGG 0.592348 5_3:-5469873 None:intergenic
CCAATGTTTACATGATGCAA+AGG 0.592560 5_3:+5469326 Msa0793500:CDS
TGCTGTGACTGCTACCGCCG+GGG 0.595836 5_3:+5468999 Msa0793500:CDS
CACAGCAACACTACATTGTG+AGG 0.598044 5_3:-5468383 None:intergenic
ATGGTCGTGGGAGAATTGAC+TGG 0.601519 5_3:-5468506 None:intergenic
CCATTGGAATTCGAGCTGAT+GGG 0.601553 5_3:+5469574 Msa0793500:CDS
AGTTTGTACCTGTAATTCCA+AGG 0.609145 5_3:+5469601 Msa0793500:CDS
AAAGACGAAGCTCCTTCTGG+AGG 0.611357 5_3:+5468478 Msa0793500:CDS
ATCTTTACGTGCTGGCATTG+TGG 0.613475 5_3:-5469628 None:intergenic
AATTCCAATGGCAAGAGGAG+TGG 0.613750 5_3:-5469562 None:intergenic
AAACAGCATCTCATGGTCGT+GGG 0.616728 5_3:-5468518 None:intergenic
TATCTCCAAACAGCATCTCA+TGG 0.617418 5_3:-5468525 None:intergenic
GTTTGTGGTGCAGCAATGGA+AGG 0.619096 5_3:+5469480 Msa0793500:CDS
TGGTCATGGTTGGTGTGCTG+AGG 0.620833 5_3:+5469917 Msa0793500:CDS
AAAGCTTCTCAAGAAACTAT+GGG 0.624225 5_3:+5468919 Msa0793500:CDS
AATGATGTGATACTTGTTGG+AGG 0.629718 5_3:+5469366 Msa0793500:CDS
TAGGACCTATGGTGCCACAA+TGG 0.630018 5_3:+5469947 Msa0793500:CDS
TGGTGCCTGTTATGGAAGTG+AGG 0.631903 5_3:+5469877 Msa0793500:CDS
TGACAGGGCGGAGTTTGAGG+AGG 0.633647 5_3:+5469263 Msa0793500:CDS
TATAAACCCTTTGGAAGGTG+CGG 0.634750 5_3:+5469458 Msa0793500:CDS
TGACACTGAAACAACTGGGG+AGG 0.635654 5_3:+5468312 Msa0793500:CDS
GCATTGGCAGGAAGTACCAT+CGG 0.637875 5_3:+5469039 Msa0793500:CDS
AGGATGCCAATGGTTGATGA+TGG 0.639984 5_3:+5469897 Msa0793500:CDS
GGATCCAGGCATCACAACAC+CGG 0.644727 5_3:-5469844 None:intergenic
GATATGCAAGGTTGTTGACA+GGG 0.644837 5_3:+5469248 Msa0793500:CDS
ATACTTGTGTACGAAGGTGA+GGG 0.646011 5_3:+5469693 Msa0793500:CDS
AGGATGTTCTTATATCCCAA+GGG 0.646556 5_3:+5469386 Msa0793500:CDS
GTTTGAGGAGGTGAACAAAG+AGG 0.649304 5_3:+5469275 Msa0793500:CDS
GCTCGAATTCCAATGGCAAG+AGG 0.649760 5_3:-5469567 None:intergenic
TGGTTGATGATGGTCATGGT+TGG 0.651359 5_3:+5469907 Msa0793500:CDS
CAAACGACCGATAAGAAATG+TGG 0.653357 5_3:+5468759 Msa0793500:CDS
ACTCCACCAGAAACATTGCA+AGG 0.653765 5_3:-5468711 None:intergenic
GCCTGGATCCCGTATACCTG+TGG 0.656774 5_3:+5469857 Msa0793500:CDS
CCAATGGTTGATGATGGTCA+TGG 0.660629 5_3:+5469903 Msa0793500:CDS
ATGTTCTTATATCCCAAGGG+TGG 0.662483 5_3:+5469389 Msa0793500:CDS
TGACTGGTAACTCCTCCAGA+AGG 0.672347 5_3:-5468490 None:intergenic
GAGGGTAACCAAATCCATTG+TGG 0.675212 5_3:-5469961 None:intergenic
GATGCCTGAACCAACAGCAG+TGG 0.675835 5_3:+5468870 Msa0793500:CDS
CAGAGTTGATACTGACCCTG+TGG 0.678557 5_3:+5468576 Msa0793500:CDS
TATTCATGATAATCAAACTG+AGG 0.679559 5_3:+5469665 Msa0793500:CDS
GCTGTGACTGCTACCGCCGG+GGG 0.681642 5_3:+5469000 Msa0793500:CDS
AAATATATTCAAGCGTCATG+GGG 0.682975 5_3:+5469113 Msa0793500:CDS
CACAATGTAGTGTTGCTGTG+TGG 0.686328 5_3:+5468386 Msa0793500:CDS
AGATGGTTTGAAGATATGCA+AGG 0.687926 5_3:+5469236 Msa0793500:CDS
TTGGCAGGAAGTACCATCGG+TGG 0.690515 5_3:+5469042 Msa0793500:CDS
ATCTGACACTGAAACAACTG+GGG 0.702980 5_3:+5468309 Msa0793500:CDS
ATGCAAGGTTGTTGACAGGG+CGG 0.708122 5_3:+5469251 Msa0793500:CDS
TGTGTGGAATGGCTCCGAAG+TGG 0.718800 5_3:+5468402 Msa0793500:CDS
TATGGAAGTGAGGATGCCAA+TGG 0.723950 5_3:+5469887 Msa0793500:CDS
GCATTGATACTTGTGTACGA+AGG 0.792141 5_3:+5469687 Msa0793500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAACAGAAGTTTATAA+AGG + chr5_3:5469435-5469454 Msa0793500:CDS 15.0%
!! AAAATAACAGAAGTTTATAA+AGG + chr5_3:5469435-5469454 Msa0793500:CDS 15.0%
!!! TTGAATATATTTTCAGAATC+TGG - chr5_3:5469105-5469124 None:intergenic 20.0%
!! TTAGGATATTTCAAGATAAT+GGG + chr5_3:5469741-5469760 Msa0793500:CDS 20.0%
!!! TTGAATATATTTTCAGAATC+TGG - chr5_3:5469105-5469124 None:intergenic 20.0%
!! TTAGGATATTTCAAGATAAT+GGG + chr5_3:5469741-5469760 Msa0793500:CDS 20.0%
!! AATTGCTCTCATTTTCAATA+TGG + chr5_3:5468957-5468976 Msa0793500:CDS 25.0%
!! ATTGCTCTCATTTTCAATAT+GGG + chr5_3:5468958-5468977 Msa0793500:CDS 25.0%
! AAAATATATTCAAGCGTCAT+GGG + chr5_3:5469112-5469131 Msa0793500:CDS 25.0%
! GGTCAAAGAAATTAAATCAA+TGG + chr5_3:5469134-5469153 Msa0793500:CDS 25.0%
! ATAAATGATGTGATACTTGT+TGG + chr5_3:5469363-5469382 Msa0793500:CDS 25.0%
!!! AACTTCTGTTATTTTGCATA+AGG - chr5_3:5469430-5469449 None:intergenic 25.0%
!! TTATAAAGGTATAAACCCTT+TGG + chr5_3:5469449-5469468 Msa0793500:CDS 25.0%
! TATTCATGATAATCAAACTG+AGG + chr5_3:5469665-5469684 Msa0793500:CDS 25.0%
! GTTAGGATATTTCAAGATAA+TGG + chr5_3:5469740-5469759 Msa0793500:CDS 25.0%
!! AATTGCTCTCATTTTCAATA+TGG + chr5_3:5468957-5468976 Msa0793500:CDS 25.0%
!! ATTGCTCTCATTTTCAATAT+GGG + chr5_3:5468958-5468977 Msa0793500:CDS 25.0%
! AAAATATATTCAAGCGTCAT+GGG + chr5_3:5469112-5469131 Msa0793500:CDS 25.0%
! GGTCAAAGAAATTAAATCAA+TGG + chr5_3:5469134-5469153 Msa0793500:CDS 25.0%
! ATAAATGATGTGATACTTGT+TGG + chr5_3:5469363-5469382 Msa0793500:CDS 25.0%
!!! AACTTCTGTTATTTTGCATA+AGG - chr5_3:5469430-5469449 None:intergenic 25.0%
!! TTATAAAGGTATAAACCCTT+TGG + chr5_3:5469449-5469468 Msa0793500:CDS 25.0%
! TATTCATGATAATCAAACTG+AGG + chr5_3:5469665-5469684 Msa0793500:CDS 25.0%
! GTTAGGATATTTCAAGATAA+TGG + chr5_3:5469740-5469759 Msa0793500:CDS 25.0%
ATAGCGATTGGAATTGATAT+TGG + chr5_3:5468358-5468377 Msa0793500:CDS 30.0%
TTCAATATGAAACGCTTGAT+CGG + chr5_3:5468553-5468572 Msa0793500:CDS 30.0%
! AAGTAAAAATCTGCCATTTC+TGG + chr5_3:5468606-5468625 Msa0793500:CDS 30.0%
AAAGCTTCTCAAGAAACTAT+GGG + chr5_3:5468919-5468938 Msa0793500:CDS 30.0%
GAAAATATATTCAAGCGTCA+TGG + chr5_3:5469111-5469130 Msa0793500:CDS 30.0%
AAATATATTCAAGCGTCATG+GGG + chr5_3:5469113-5469132 Msa0793500:CDS 30.0%
CATGTAAACATTGGATGATA+AGG - chr5_3:5469320-5469339 None:intergenic 30.0%
TCTTGAAATATCCTAACAAG+TGG - chr5_3:5469737-5469756 None:intergenic 30.0%
ATAGCGATTGGAATTGATAT+TGG + chr5_3:5468358-5468377 Msa0793500:CDS 30.0%
TTCAATATGAAACGCTTGAT+CGG + chr5_3:5468553-5468572 Msa0793500:CDS 30.0%
! AAGTAAAAATCTGCCATTTC+TGG + chr5_3:5468606-5468625 Msa0793500:CDS 30.0%
AAAGCTTCTCAAGAAACTAT+GGG + chr5_3:5468919-5468938 Msa0793500:CDS 30.0%
GAAAATATATTCAAGCGTCA+TGG + chr5_3:5469111-5469130 Msa0793500:CDS 30.0%
AAATATATTCAAGCGTCATG+GGG + chr5_3:5469113-5469132 Msa0793500:CDS 30.0%
CATGTAAACATTGGATGATA+AGG - chr5_3:5469320-5469339 None:intergenic 30.0%
TCTTGAAATATCCTAACAAG+TGG - chr5_3:5469737-5469756 None:intergenic 30.0%
! TCAATTCCAATCGCTATTTC+AGG - chr5_3:5468355-5468374 None:intergenic 35.0%
!! GTTTTTCAAAAGCTCCACTT+CGG - chr5_3:5468419-5468438 None:intergenic 35.0%
! TTTTACTTGCATGAACCACA+GGG - chr5_3:5468594-5468613 None:intergenic 35.0%
! TTTTTACTTGCATGAACCAC+AGG - chr5_3:5468595-5468614 None:intergenic 35.0%
TTCACTAACGCAGCAATAAA+TGG - chr5_3:5468658-5468677 None:intergenic 35.0%
GTAAGCACCACATTTCTTAT+CGG - chr5_3:5468769-5468788 None:intergenic 35.0%
GAAAGCTTCTCAAGAAACTA+TGG + chr5_3:5468918-5468937 Msa0793500:CDS 35.0%
! AGTATCCCAGATAAAAGCAT+TGG + chr5_3:5469023-5469042 Msa0793500:CDS 35.0%
!! TGTTCAGGTTGATGTAGATT+TGG + chr5_3:5469212-5469231 Msa0793500:CDS 35.0%
!! GTTCAGGTTGATGTAGATTT+GGG + chr5_3:5469213-5469232 Msa0793500:CDS 35.0%
AGATGGTTTGAAGATATGCA+AGG + chr5_3:5469236-5469255 Msa0793500:CDS 35.0%
CCTTTGCATCATGTAAACAT+TGG - chr5_3:5469329-5469348 None:intergenic 35.0%
CCAATGTTTACATGATGCAA+AGG + chr5_3:5469326-5469345 Msa0793500:CDS 35.0%
ATGATGCAAAGGTAGAAGTT+GGG + chr5_3:5469337-5469356 Msa0793500:CDS 35.0%
! AATGATGTGATACTTGTTGG+AGG + chr5_3:5469366-5469385 Msa0793500:CDS 35.0%
AGGATGTTCTTATATCCCAA+GGG + chr5_3:5469386-5469405 Msa0793500:CDS 35.0%
! AAAGGTATAAACCCTTTGGA+AGG + chr5_3:5469453-5469472 Msa0793500:CDS 35.0%
AACAAGTCCAAGTTTCCAAA+GGG - chr5_3:5469531-5469550 None:intergenic 35.0%
TAACAAGTCCAAGTTTCCAA+AGG - chr5_3:5469532-5469551 None:intergenic 35.0%
AGTTTGTACCTGTAATTCCA+AGG + chr5_3:5469601-5469620 Msa0793500:CDS 35.0%
AAAAGTAGATCTTTACGTGC+TGG - chr5_3:5469639-5469658 None:intergenic 35.0%
! TCAATTCCAATCGCTATTTC+AGG - chr5_3:5468355-5468374 None:intergenic 35.0%
!! GTTTTTCAAAAGCTCCACTT+CGG - chr5_3:5468419-5468438 None:intergenic 35.0%
! TTTTACTTGCATGAACCACA+GGG - chr5_3:5468594-5468613 None:intergenic 35.0%
! TTTTTACTTGCATGAACCAC+AGG - chr5_3:5468595-5468614 None:intergenic 35.0%
TTCACTAACGCAGCAATAAA+TGG - chr5_3:5468658-5468677 None:intergenic 35.0%
GTAAGCACCACATTTCTTAT+CGG - chr5_3:5468769-5468788 None:intergenic 35.0%
GAAAGCTTCTCAAGAAACTA+TGG + chr5_3:5468918-5468937 Msa0793500:CDS 35.0%
! AGTATCCCAGATAAAAGCAT+TGG + chr5_3:5469023-5469042 Msa0793500:CDS 35.0%
!! TGTTCAGGTTGATGTAGATT+TGG + chr5_3:5469212-5469231 Msa0793500:CDS 35.0%
!! GTTCAGGTTGATGTAGATTT+GGG + chr5_3:5469213-5469232 Msa0793500:CDS 35.0%
AGATGGTTTGAAGATATGCA+AGG + chr5_3:5469236-5469255 Msa0793500:CDS 35.0%
CCTTTGCATCATGTAAACAT+TGG - chr5_3:5469329-5469348 None:intergenic 35.0%
CCAATGTTTACATGATGCAA+AGG + chr5_3:5469326-5469345 Msa0793500:CDS 35.0%
ATGATGCAAAGGTAGAAGTT+GGG + chr5_3:5469337-5469356 Msa0793500:CDS 35.0%
! AATGATGTGATACTTGTTGG+AGG + chr5_3:5469366-5469385 Msa0793500:CDS 35.0%
AGGATGTTCTTATATCCCAA+GGG + chr5_3:5469386-5469405 Msa0793500:CDS 35.0%
! AAAGGTATAAACCCTTTGGA+AGG + chr5_3:5469453-5469472 Msa0793500:CDS 35.0%
AACAAGTCCAAGTTTCCAAA+GGG - chr5_3:5469531-5469550 None:intergenic 35.0%
TAACAAGTCCAAGTTTCCAA+AGG - chr5_3:5469532-5469551 None:intergenic 35.0%
AGTTTGTACCTGTAATTCCA+AGG + chr5_3:5469601-5469620 Msa0793500:CDS 35.0%
AAAAGTAGATCTTTACGTGC+TGG - chr5_3:5469639-5469658 None:intergenic 35.0%
TGTTTCAGTGTCAGATGCAA+CGG - chr5_3:5468305-5468324 None:intergenic 40.0%
CATCTGACACTGAAACAACT+GGG + chr5_3:5468308-5468327 Msa0793500:CDS 40.0%
ATCTGACACTGAAACAACTG+GGG + chr5_3:5468309-5468328 Msa0793500:CDS 40.0%
TATCTCCAAACAGCATCTCA+TGG - chr5_3:5468528-5468547 None:intergenic 40.0%
AACATTGCAAGGACTTCTTC+TGG - chr5_3:5468703-5468722 None:intergenic 40.0%
AGAAGTCCTTGCAATGTTTC+TGG + chr5_3:5468705-5468724 Msa0793500:CDS 40.0%
CAAACGACCGATAAGAAATG+TGG + chr5_3:5468759-5468778 Msa0793500:CDS 40.0%
AAATGTGGTGCTTACTGTTC+CGG + chr5_3:5468774-5468793 Msa0793500:CDS 40.0%
TGGAAACGACTGAATGAAAC+CGG - chr5_3:5468796-5468815 None:intergenic 40.0%
TATAATAACGCCACTGCTGT+TGG - chr5_3:5468883-5468902 None:intergenic 40.0%
ACAGCAGTGGCGTTATTATA+TGG + chr5_3:5468883-5468902 Msa0793500:CDS 40.0%
! CTCATTTTCAATATGGGTGC+TGG + chr5_3:5468964-5468983 Msa0793500:CDS 40.0%
! TCCTGCCAATGCTTTTATCT+GGG - chr5_3:5469031-5469050 None:intergenic 40.0%
! TTCCTGCCAATGCTTTTATC+TGG - chr5_3:5469032-5469051 None:intergenic 40.0%
AAGCTGATGAATTGCATCCT+GGG - chr5_3:5469178-5469197 None:intergenic 40.0%
AAAGCTGATGAATTGCATCC+TGG - chr5_3:5469179-5469198 None:intergenic 40.0%
ATCAACCTGAACACTGCTTT+GGG - chr5_3:5469205-5469224 None:intergenic 40.0%
GTTGATGTAGATTTGGGAGA+TGG + chr5_3:5469219-5469238 Msa0793500:CDS 40.0%
AGATATGCAAGGTTGTTGAC+AGG + chr5_3:5469247-5469266 Msa0793500:CDS 40.0%
GATATGCAAGGTTGTTGACA+GGG + chr5_3:5469248-5469267 Msa0793500:CDS 40.0%
CATGATGCAAAGGTAGAAGT+TGG + chr5_3:5469336-5469355 Msa0793500:CDS 40.0%
TGATGCAAAGGTAGAAGTTG+GGG + chr5_3:5469338-5469357 Msa0793500:CDS 40.0%
GAGGATGTTCTTATATCCCA+AGG + chr5_3:5469385-5469404 Msa0793500:CDS 40.0%
ATGTTCTTATATCCCAAGGG+TGG + chr5_3:5469389-5469408 Msa0793500:CDS 40.0%
TAACAAGATTCTCCACCCTT+GGG - chr5_3:5469404-5469423 None:intergenic 40.0%
! TATAAACCCTTTGGAAGGTG+CGG + chr5_3:5469458-5469477 Msa0793500:CDS 40.0%
! GCATTGATACTTGTGTACGA+AGG + chr5_3:5469687-5469706 Msa0793500:CDS 40.0%
ATACTTGTGTACGAAGGTGA+GGG + chr5_3:5469693-5469712 Msa0793500:CDS 40.0%
GCAGAAGAAAACCACTTGTT+AGG + chr5_3:5469723-5469742 Msa0793500:CDS 40.0%
! CTGATTTCAGGAACTCCTTT+TGG - chr5_3:5469780-5469799 None:intergenic 40.0%
TGTTTCAGTGTCAGATGCAA+CGG - chr5_3:5468305-5468324 None:intergenic 40.0%
CATCTGACACTGAAACAACT+GGG + chr5_3:5468308-5468327 Msa0793500:CDS 40.0%
ATCTGACACTGAAACAACTG+GGG + chr5_3:5468309-5468328 Msa0793500:CDS 40.0%
TATCTCCAAACAGCATCTCA+TGG - chr5_3:5468528-5468547 None:intergenic 40.0%
AACATTGCAAGGACTTCTTC+TGG - chr5_3:5468703-5468722 None:intergenic 40.0%
AGAAGTCCTTGCAATGTTTC+TGG + chr5_3:5468705-5468724 Msa0793500:CDS 40.0%
CAAACGACCGATAAGAAATG+TGG + chr5_3:5468759-5468778 Msa0793500:CDS 40.0%
AAATGTGGTGCTTACTGTTC+CGG + chr5_3:5468774-5468793 Msa0793500:CDS 40.0%
TGGAAACGACTGAATGAAAC+CGG - chr5_3:5468796-5468815 None:intergenic 40.0%
TATAATAACGCCACTGCTGT+TGG - chr5_3:5468883-5468902 None:intergenic 40.0%
ACAGCAGTGGCGTTATTATA+TGG + chr5_3:5468883-5468902 Msa0793500:CDS 40.0%
! CTCATTTTCAATATGGGTGC+TGG + chr5_3:5468964-5468983 Msa0793500:CDS 40.0%
! TCCTGCCAATGCTTTTATCT+GGG - chr5_3:5469031-5469050 None:intergenic 40.0%
! TTCCTGCCAATGCTTTTATC+TGG - chr5_3:5469032-5469051 None:intergenic 40.0%
AAGCTGATGAATTGCATCCT+GGG - chr5_3:5469178-5469197 None:intergenic 40.0%
AAAGCTGATGAATTGCATCC+TGG - chr5_3:5469179-5469198 None:intergenic 40.0%
ATCAACCTGAACACTGCTTT+GGG - chr5_3:5469205-5469224 None:intergenic 40.0%
GTTGATGTAGATTTGGGAGA+TGG + chr5_3:5469219-5469238 Msa0793500:CDS 40.0%
AGATATGCAAGGTTGTTGAC+AGG + chr5_3:5469247-5469266 Msa0793500:CDS 40.0%
GATATGCAAGGTTGTTGACA+GGG + chr5_3:5469248-5469267 Msa0793500:CDS 40.0%
CATGATGCAAAGGTAGAAGT+TGG + chr5_3:5469336-5469355 Msa0793500:CDS 40.0%
TGATGCAAAGGTAGAAGTTG+GGG + chr5_3:5469338-5469357 Msa0793500:CDS 40.0%
GAGGATGTTCTTATATCCCA+AGG + chr5_3:5469385-5469404 Msa0793500:CDS 40.0%
ATGTTCTTATATCCCAAGGG+TGG + chr5_3:5469389-5469408 Msa0793500:CDS 40.0%
TAACAAGATTCTCCACCCTT+GGG - chr5_3:5469404-5469423 None:intergenic 40.0%
! TATAAACCCTTTGGAAGGTG+CGG + chr5_3:5469458-5469477 Msa0793500:CDS 40.0%
! GCATTGATACTTGTGTACGA+AGG + chr5_3:5469687-5469706 Msa0793500:CDS 40.0%
ATACTTGTGTACGAAGGTGA+GGG + chr5_3:5469693-5469712 Msa0793500:CDS 40.0%
GCAGAAGAAAACCACTTGTT+AGG + chr5_3:5469723-5469742 Msa0793500:CDS 40.0%
! CTGATTTCAGGAACTCCTTT+TGG - chr5_3:5469780-5469799 None:intergenic 40.0%
TCAGATGCAACGGTATATGC+AGG - chr5_3:5468295-5468314 None:intergenic 45.0%
GCATCTGACACTGAAACAAC+TGG + chr5_3:5468307-5468326 Msa0793500:CDS 45.0%
! CCAATCGCTATTTCAGGAAG+AGG - chr5_3:5468349-5468368 None:intergenic 45.0%
CCTCTTCCTGAAATAGCGAT+TGG + chr5_3:5468346-5468365 Msa0793500:CDS 45.0%
CACAGCAACACTACATTGTG+AGG - chr5_3:5468386-5468405 None:intergenic 45.0%
! CACAATGTAGTGTTGCTGTG+TGG + chr5_3:5468386-5468405 Msa0793500:CDS 45.0%
! TGTAGTGTTGCTGTGTGGAA+TGG + chr5_3:5468391-5468410 Msa0793500:CDS 45.0%
TTCAAAGACGAAGCTCCTTC+TGG + chr5_3:5468475-5468494 Msa0793500:CDS 45.0%
AAACAGCATCTCATGGTCGT+GGG - chr5_3:5468521-5468540 None:intergenic 45.0%
CTGCGTTAGTGAACAATGTC+TGG + chr5_3:5468665-5468684 Msa0793500:CDS 45.0%
!! AGTCCTTGCAATGTTTCTGG+TGG + chr5_3:5468708-5468727 Msa0793500:CDS 45.0%
ACTCCACCAGAAACATTGCA+AGG - chr5_3:5468714-5468733 None:intergenic 45.0%
TCTCAAGAAACTATGGGCAG+TGG + chr5_3:5468925-5468944 Msa0793500:CDS 45.0%
!! TTTTATCTGGGATACTCCCC+CGG - chr5_3:5469019-5469038 None:intergenic 45.0%
!! TCCCAGATAAAAGCATTGGC+AGG + chr5_3:5469027-5469046 Msa0793500:CDS 45.0%
TACCATCGGTGGAGAAGATT+TGG + chr5_3:5469053-5469072 Msa0793500:CDS 45.0%
AACCAAATCTTCTCCACCGA+TGG - chr5_3:5469058-5469077 None:intergenic 45.0%
CATCAACCTGAACACTGCTT+TGG - chr5_3:5469206-5469225 None:intergenic 45.0%
GTTTGAGGAGGTGAACAAAG+AGG + chr5_3:5469275-5469294 Msa0793500:CDS 45.0%
GTAACAAGATTCTCCACCCT+TGG - chr5_3:5469405-5469424 None:intergenic 45.0%
! CAGTGATCCCTTTGGAAACT+TGG + chr5_3:5469521-5469540 Msa0793500:CDS 45.0%
AATTCCAATGGCAAGAGGAG+TGG - chr5_3:5469565-5469584 None:intergenic 45.0%
CCATTGGAATTCGAGCTGAT+GGG + chr5_3:5469574-5469593 Msa0793500:CDS 45.0%
GTGGTGTTCCTTGGAATTAC+AGG - chr5_3:5469612-5469631 None:intergenic 45.0%
! ATCTTTACGTGCTGGCATTG+TGG - chr5_3:5469631-5469650 None:intergenic 45.0%
GATACTTGTGTACGAAGGTG+AGG + chr5_3:5469692-5469711 Msa0793500:CDS 45.0%
TCCTGAAATCAGTGTGTGCA+TGG + chr5_3:5469788-5469807 Msa0793500:CDS 45.0%
!! TCCATGCACACACTGATTTC+AGG - chr5_3:5469792-5469811 None:intergenic 45.0%
TAACAGGCACCACAGGTATA+CGG - chr5_3:5469869-5469888 None:intergenic 45.0%
TATACCTGTGGTGCCTGTTA+TGG + chr5_3:5469869-5469888 Msa0793500:CDS 45.0%
TATGGAAGTGAGGATGCCAA+TGG + chr5_3:5469887-5469906 Msa0793500:CDS 45.0%
!! AGGATGCCAATGGTTGATGA+TGG + chr5_3:5469897-5469916 Msa0793500:CDS 45.0%
CCATGACCATCATCAACCAT+TGG - chr5_3:5469906-5469925 None:intergenic 45.0%
!! CCAATGGTTGATGATGGTCA+TGG + chr5_3:5469903-5469922 Msa0793500:CDS 45.0%
!! TGGTTGATGATGGTCATGGT+TGG + chr5_3:5469907-5469926 Msa0793500:CDS 45.0%
GGCACCATAGGTCCTATTTA+GGG - chr5_3:5469943-5469962 None:intergenic 45.0%
TGGCACCATAGGTCCTATTT+AGG - chr5_3:5469944-5469963 None:intergenic 45.0%
CAAATCCATTGTGGCACCAT+AGG - chr5_3:5469955-5469974 None:intergenic 45.0%
!! CTATGGTGCCACAATGGATT+TGG + chr5_3:5469953-5469972 Msa0793500:CDS 45.0%
GAGGGTAACCAAATCCATTG+TGG - chr5_3:5469964-5469983 None:intergenic 45.0%
! GGATTTGGTTACCCTCAAGA+AGG + chr5_3:5469968-5469987 Msa0793500:CDS 45.0%
TCAGATGCAACGGTATATGC+AGG - chr5_3:5468295-5468314 None:intergenic 45.0%
GCATCTGACACTGAAACAAC+TGG + chr5_3:5468307-5468326 Msa0793500:CDS 45.0%
! CCAATCGCTATTTCAGGAAG+AGG - chr5_3:5468349-5468368 None:intergenic 45.0%
CCTCTTCCTGAAATAGCGAT+TGG + chr5_3:5468346-5468365 Msa0793500:CDS 45.0%
CACAGCAACACTACATTGTG+AGG - chr5_3:5468386-5468405 None:intergenic 45.0%
! CACAATGTAGTGTTGCTGTG+TGG + chr5_3:5468386-5468405 Msa0793500:CDS 45.0%
! TGTAGTGTTGCTGTGTGGAA+TGG + chr5_3:5468391-5468410 Msa0793500:CDS 45.0%
TTCAAAGACGAAGCTCCTTC+TGG + chr5_3:5468475-5468494 Msa0793500:CDS 45.0%
AAACAGCATCTCATGGTCGT+GGG - chr5_3:5468521-5468540 None:intergenic 45.0%
CTGCGTTAGTGAACAATGTC+TGG + chr5_3:5468665-5468684 Msa0793500:CDS 45.0%
!! AGTCCTTGCAATGTTTCTGG+TGG + chr5_3:5468708-5468727 Msa0793500:CDS 45.0%
ACTCCACCAGAAACATTGCA+AGG - chr5_3:5468714-5468733 None:intergenic 45.0%
TCTCAAGAAACTATGGGCAG+TGG + chr5_3:5468925-5468944 Msa0793500:CDS 45.0%
!! TTTTATCTGGGATACTCCCC+CGG - chr5_3:5469019-5469038 None:intergenic 45.0%
!! TCCCAGATAAAAGCATTGGC+AGG + chr5_3:5469027-5469046 Msa0793500:CDS 45.0%
TACCATCGGTGGAGAAGATT+TGG + chr5_3:5469053-5469072 Msa0793500:CDS 45.0%
AACCAAATCTTCTCCACCGA+TGG - chr5_3:5469058-5469077 None:intergenic 45.0%
CATCAACCTGAACACTGCTT+TGG - chr5_3:5469206-5469225 None:intergenic 45.0%
GTTTGAGGAGGTGAACAAAG+AGG + chr5_3:5469275-5469294 Msa0793500:CDS 45.0%
GTAACAAGATTCTCCACCCT+TGG - chr5_3:5469405-5469424 None:intergenic 45.0%
! CAGTGATCCCTTTGGAAACT+TGG + chr5_3:5469521-5469540 Msa0793500:CDS 45.0%
AATTCCAATGGCAAGAGGAG+TGG - chr5_3:5469565-5469584 None:intergenic 45.0%
CCATTGGAATTCGAGCTGAT+GGG + chr5_3:5469574-5469593 Msa0793500:CDS 45.0%
GTGGTGTTCCTTGGAATTAC+AGG - chr5_3:5469612-5469631 None:intergenic 45.0%
! ATCTTTACGTGCTGGCATTG+TGG - chr5_3:5469631-5469650 None:intergenic 45.0%
GATACTTGTGTACGAAGGTG+AGG + chr5_3:5469692-5469711 Msa0793500:CDS 45.0%
TCCTGAAATCAGTGTGTGCA+TGG + chr5_3:5469788-5469807 Msa0793500:CDS 45.0%
!! TCCATGCACACACTGATTTC+AGG - chr5_3:5469792-5469811 None:intergenic 45.0%
TAACAGGCACCACAGGTATA+CGG - chr5_3:5469869-5469888 None:intergenic 45.0%
TATACCTGTGGTGCCTGTTA+TGG + chr5_3:5469869-5469888 Msa0793500:CDS 45.0%
TATGGAAGTGAGGATGCCAA+TGG + chr5_3:5469887-5469906 Msa0793500:CDS 45.0%
!! AGGATGCCAATGGTTGATGA+TGG + chr5_3:5469897-5469916 Msa0793500:CDS 45.0%
CCATGACCATCATCAACCAT+TGG - chr5_3:5469906-5469925 None:intergenic 45.0%
!! CCAATGGTTGATGATGGTCA+TGG + chr5_3:5469903-5469922 Msa0793500:CDS 45.0%
!! TGGTTGATGATGGTCATGGT+TGG + chr5_3:5469907-5469926 Msa0793500:CDS 45.0%
GGCACCATAGGTCCTATTTA+GGG - chr5_3:5469943-5469962 None:intergenic 45.0%
TGGCACCATAGGTCCTATTT+AGG - chr5_3:5469944-5469963 None:intergenic 45.0%
CAAATCCATTGTGGCACCAT+AGG - chr5_3:5469955-5469974 None:intergenic 45.0%
!! CTATGGTGCCACAATGGATT+TGG + chr5_3:5469953-5469972 Msa0793500:CDS 45.0%
GAGGGTAACCAAATCCATTG+TGG - chr5_3:5469964-5469983 None:intergenic 45.0%
! GGATTTGGTTACCCTCAAGA+AGG + chr5_3:5469968-5469987 Msa0793500:CDS 45.0%
TGACACTGAAACAACTGGGG+AGG + chr5_3:5468312-5468331 Msa0793500:CDS 50.0%
AAAGACGAAGCTCCTTCTGG+AGG + chr5_3:5468478-5468497 Msa0793500:CDS 50.0%
TGACTGGTAACTCCTCCAGA+AGG - chr5_3:5468493-5468512 None:intergenic 50.0%
ATGGTCGTGGGAGAATTGAC+TGG - chr5_3:5468509-5468528 None:intergenic 50.0%
CAAACAGCATCTCATGGTCG+TGG - chr5_3:5468522-5468541 None:intergenic 50.0%
CACGACCATGAGATGCTGTT+TGG + chr5_3:5468520-5468539 Msa0793500:CDS 50.0%
!! CAGAGTTGATACTGACCCTG+TGG + chr5_3:5468576-5468595 Msa0793500:CDS 50.0%
TCCAAGGTCTGCACCAGAAA+TGG - chr5_3:5468622-5468641 None:intergenic 50.0%
!! AAGGACTTCTTCTGGAGTGG+TGG - chr5_3:5468695-5468714 None:intergenic 50.0%
! TGCAAGGACTTCTTCTGGAG+TGG - chr5_3:5468698-5468717 None:intergenic 50.0%
! TCGCACAAGCACGCTCTAAA+CGG - chr5_3:5468825-5468844 None:intergenic 50.0%
! TTTAGAGCGTGCTTGTGCGA+TGG + chr5_3:5468825-5468844 Msa0793500:CDS 50.0%
!! TGGCTGGTCTTCATGTTCTC+AGG + chr5_3:5468845-5468864 Msa0793500:CDS 50.0%
!! GCATTGGCAGGAAGTACCAT+CGG + chr5_3:5469039-5469058 Msa0793500:CDS 50.0%
!! ATTGCTTCGAGTTGCAACCC+AGG + chr5_3:5469158-5469177 Msa0793500:CDS 50.0%
TTCCACCCAAAGCAGTGTTC+AGG + chr5_3:5469197-5469216 Msa0793500:CDS 50.0%
! AACCTGAACACTGCTTTGGG+TGG - chr5_3:5469202-5469221 None:intergenic 50.0%
ATGCAAGGTTGTTGACAGGG+CGG + chr5_3:5469251-5469270 Msa0793500:CDS 50.0%
CACAAACCGCACCTTCCAAA+GGG - chr5_3:5469467-5469486 None:intergenic 50.0%
GTTTGTGGTGCAGCAATGGA+AGG + chr5_3:5469480-5469499 Msa0793500:CDS 50.0%
! ATGGAAGGAGCTGTTGCTTC+AGG + chr5_3:5469495-5469514 Msa0793500:CDS 50.0%
TCAGGCATCAGTGATCCCTT+TGG + chr5_3:5469513-5469532 Msa0793500:CDS 50.0%
GCTCGAATTCCAATGGCAAG+AGG - chr5_3:5469570-5469589 None:intergenic 50.0%
GCCATTGGAATTCGAGCTGA+TGG + chr5_3:5469573-5469592 Msa0793500:CDS 50.0%
CCCATCAGCTCGAATTCCAA+TGG - chr5_3:5469577-5469596 None:intergenic 50.0%
GTACGAAGGTGAGGGAAAGA+AGG + chr5_3:5469701-5469720 Msa0793500:CDS 50.0%
GGAATACCTGCAGCACCAAA+AGG + chr5_3:5469762-5469781 Msa0793500:CDS 50.0%
!! AACGTGCTGCGAGTTTTAGC+CGG + chr5_3:5469825-5469844 Msa0793500:CDS 50.0%
AACAGGCACCACAGGTATAC+GGG - chr5_3:5469868-5469887 None:intergenic 50.0%
ACTTCCATAACAGGCACCAC+AGG - chr5_3:5469876-5469895 None:intergenic 50.0%
TGGTGCCTGTTATGGAAGTG+AGG + chr5_3:5469877-5469896 Msa0793500:CDS 50.0%
GGCATCCTCACTTCCATAAC+AGG - chr5_3:5469885-5469904 None:intergenic 50.0%
GAGGCCCTAAATAGGACCTA+TGG + chr5_3:5469936-5469955 Msa0793500:CDS 50.0%
!! TAGGACCTATGGTGCCACAA+TGG + chr5_3:5469947-5469966 Msa0793500:CDS 50.0%
TGACACTGAAACAACTGGGG+AGG + chr5_3:5468312-5468331 Msa0793500:CDS 50.0%
AAAGACGAAGCTCCTTCTGG+AGG + chr5_3:5468478-5468497 Msa0793500:CDS 50.0%
TGACTGGTAACTCCTCCAGA+AGG - chr5_3:5468493-5468512 None:intergenic 50.0%
ATGGTCGTGGGAGAATTGAC+TGG - chr5_3:5468509-5468528 None:intergenic 50.0%
CAAACAGCATCTCATGGTCG+TGG - chr5_3:5468522-5468541 None:intergenic 50.0%
CACGACCATGAGATGCTGTT+TGG + chr5_3:5468520-5468539 Msa0793500:CDS 50.0%
!! CAGAGTTGATACTGACCCTG+TGG + chr5_3:5468576-5468595 Msa0793500:CDS 50.0%
TCCAAGGTCTGCACCAGAAA+TGG - chr5_3:5468622-5468641 None:intergenic 50.0%
!! AAGGACTTCTTCTGGAGTGG+TGG - chr5_3:5468695-5468714 None:intergenic 50.0%
! TGCAAGGACTTCTTCTGGAG+TGG - chr5_3:5468698-5468717 None:intergenic 50.0%
! TCGCACAAGCACGCTCTAAA+CGG - chr5_3:5468825-5468844 None:intergenic 50.0%
! TTTAGAGCGTGCTTGTGCGA+TGG + chr5_3:5468825-5468844 Msa0793500:CDS 50.0%
!! TGGCTGGTCTTCATGTTCTC+AGG + chr5_3:5468845-5468864 Msa0793500:CDS 50.0%
!! GCATTGGCAGGAAGTACCAT+CGG + chr5_3:5469039-5469058 Msa0793500:CDS 50.0%
!! ATTGCTTCGAGTTGCAACCC+AGG + chr5_3:5469158-5469177 Msa0793500:CDS 50.0%
TTCCACCCAAAGCAGTGTTC+AGG + chr5_3:5469197-5469216 Msa0793500:CDS 50.0%
! AACCTGAACACTGCTTTGGG+TGG - chr5_3:5469202-5469221 None:intergenic 50.0%
ATGCAAGGTTGTTGACAGGG+CGG + chr5_3:5469251-5469270 Msa0793500:CDS 50.0%
CACAAACCGCACCTTCCAAA+GGG - chr5_3:5469467-5469486 None:intergenic 50.0%
GTTTGTGGTGCAGCAATGGA+AGG + chr5_3:5469480-5469499 Msa0793500:CDS 50.0%
! ATGGAAGGAGCTGTTGCTTC+AGG + chr5_3:5469495-5469514 Msa0793500:CDS 50.0%
TCAGGCATCAGTGATCCCTT+TGG + chr5_3:5469513-5469532 Msa0793500:CDS 50.0%
GCTCGAATTCCAATGGCAAG+AGG - chr5_3:5469570-5469589 None:intergenic 50.0%
GCCATTGGAATTCGAGCTGA+TGG + chr5_3:5469573-5469592 Msa0793500:CDS 50.0%
CCCATCAGCTCGAATTCCAA+TGG - chr5_3:5469577-5469596 None:intergenic 50.0%
GTACGAAGGTGAGGGAAAGA+AGG + chr5_3:5469701-5469720 Msa0793500:CDS 50.0%
GGAATACCTGCAGCACCAAA+AGG + chr5_3:5469762-5469781 Msa0793500:CDS 50.0%
!! AACGTGCTGCGAGTTTTAGC+CGG + chr5_3:5469825-5469844 Msa0793500:CDS 50.0%
AACAGGCACCACAGGTATAC+GGG - chr5_3:5469868-5469887 None:intergenic 50.0%
ACTTCCATAACAGGCACCAC+AGG - chr5_3:5469876-5469895 None:intergenic 50.0%
TGGTGCCTGTTATGGAAGTG+AGG + chr5_3:5469877-5469896 Msa0793500:CDS 50.0%
GGCATCCTCACTTCCATAAC+AGG - chr5_3:5469885-5469904 None:intergenic 50.0%
GAGGCCCTAAATAGGACCTA+TGG + chr5_3:5469936-5469955 Msa0793500:CDS 50.0%
!! TAGGACCTATGGTGCCACAA+TGG + chr5_3:5469947-5469966 Msa0793500:CDS 50.0%
TGTGTGGAATGGCTCCGAAG+TGG + chr5_3:5468402-5468421 Msa0793500:CDS 55.0%
!! GCCATTTCTGGTGCAGACCT+TGG + chr5_3:5468618-5468637 Msa0793500:CDS 55.0%
CTGGTGCAGACCTTGGACAT+TGG + chr5_3:5468625-5468644 Msa0793500:CDS 55.0%
TGGACGAACGCCAATGTCCA+AGG - chr5_3:5468638-5468657 None:intergenic 55.0%
! CGCACAAGCACGCTCTAAAC+GGG - chr5_3:5468824-5468843 None:intergenic 55.0%
GATGCCTGAACCAACAGCAG+TGG + chr5_3:5468870-5468889 Msa0793500:CDS 55.0%
!! AACGCCACTGCTGTTGGTTC+AGG - chr5_3:5468877-5468896 None:intergenic 55.0%
!! TTGGCAGGAAGTACCATCGG+TGG + chr5_3:5469042-5469061 Msa0793500:CDS 55.0%
TGTTGACAGGGCGGAGTTTG+AGG + chr5_3:5469260-5469279 Msa0793500:CDS 55.0%
CCACAAACCGCACCTTCCAA+AGG - chr5_3:5469468-5469487 None:intergenic 55.0%
! CCTTTGGAAGGTGCGGTTTG+TGG + chr5_3:5469465-5469484 Msa0793500:CDS 55.0%
TGCGGTTTGTGGTGCAGCAA+TGG + chr5_3:5469476-5469495 Msa0793500:CDS 55.0%
CAAGCCACTCCTCTTGCCAT+TGG + chr5_3:5469558-5469577 Msa0793500:CDS 55.0%
GCTGGCATTGTGGTGTTCCT+TGG - chr5_3:5469621-5469640 None:intergenic 55.0%
!!! GGAACTCCTTTTGGTGCTGC+AGG - chr5_3:5469771-5469790 None:intergenic 55.0%
!! TTAGCCGGTGTTGTGATGCC+TGG + chr5_3:5469840-5469859 Msa0793500:CDS 55.0%
GGATCCAGGCATCACAACAC+CGG - chr5_3:5469847-5469866 None:intergenic 55.0%
ACCACAGGTATACGGGATCC+AGG - chr5_3:5469861-5469880 None:intergenic 55.0%
! TGGTCATGGTTGGTGTGCTG+AGG + chr5_3:5469917-5469936 Msa0793500:CDS 55.0%
GGTGTGCTGAGGCCCTAAAT+AGG + chr5_3:5469928-5469947 Msa0793500:CDS 55.0%
TGTGTGGAATGGCTCCGAAG+TGG + chr5_3:5468402-5468421 Msa0793500:CDS 55.0%
!! GCCATTTCTGGTGCAGACCT+TGG + chr5_3:5468618-5468637 Msa0793500:CDS 55.0%
CTGGTGCAGACCTTGGACAT+TGG + chr5_3:5468625-5468644 Msa0793500:CDS 55.0%
TGGACGAACGCCAATGTCCA+AGG - chr5_3:5468638-5468657 None:intergenic 55.0%
! CGCACAAGCACGCTCTAAAC+GGG - chr5_3:5468824-5468843 None:intergenic 55.0%
GATGCCTGAACCAACAGCAG+TGG + chr5_3:5468870-5468889 Msa0793500:CDS 55.0%
!! AACGCCACTGCTGTTGGTTC+AGG - chr5_3:5468877-5468896 None:intergenic 55.0%
!! TTGGCAGGAAGTACCATCGG+TGG + chr5_3:5469042-5469061 Msa0793500:CDS 55.0%
TGTTGACAGGGCGGAGTTTG+AGG + chr5_3:5469260-5469279 Msa0793500:CDS 55.0%
CCACAAACCGCACCTTCCAA+AGG - chr5_3:5469468-5469487 None:intergenic 55.0%
! CCTTTGGAAGGTGCGGTTTG+TGG + chr5_3:5469465-5469484 Msa0793500:CDS 55.0%
TGCGGTTTGTGGTGCAGCAA+TGG + chr5_3:5469476-5469495 Msa0793500:CDS 55.0%
CAAGCCACTCCTCTTGCCAT+TGG + chr5_3:5469558-5469577 Msa0793500:CDS 55.0%
GCTGGCATTGTGGTGTTCCT+TGG - chr5_3:5469621-5469640 None:intergenic 55.0%
!!! GGAACTCCTTTTGGTGCTGC+AGG - chr5_3:5469771-5469790 None:intergenic 55.0%
!! TTAGCCGGTGTTGTGATGCC+TGG + chr5_3:5469840-5469859 Msa0793500:CDS 55.0%
GGATCCAGGCATCACAACAC+CGG - chr5_3:5469847-5469866 None:intergenic 55.0%
ACCACAGGTATACGGGATCC+AGG - chr5_3:5469861-5469880 None:intergenic 55.0%
! TGGTCATGGTTGGTGTGCTG+AGG + chr5_3:5469917-5469936 Msa0793500:CDS 55.0%
GGTGTGCTGAGGCCCTAAAT+AGG + chr5_3:5469928-5469947 Msa0793500:CDS 55.0%
! CACGCTCTAAACGGGTCAGC+TGG - chr5_3:5468816-5468835 None:intergenic 60.0%
GTTGCTGTGACTGCTACCGC+CGG + chr5_3:5468997-5469016 Msa0793500:CDS 60.0%
TTGCTGTGACTGCTACCGCC+GGG + chr5_3:5468998-5469017 Msa0793500:CDS 60.0%
! TATCTGGGATACTCCCCCGG+CGG - chr5_3:5469016-5469035 None:intergenic 60.0%
TGACAGGGCGGAGTTTGAGG+AGG + chr5_3:5469263-5469282 Msa0793500:CDS 60.0%
GCCTGGATCCCGTATACCTG+TGG + chr5_3:5469857-5469876 Msa0793500:CDS 60.0%
! CACGCTCTAAACGGGTCAGC+TGG - chr5_3:5468816-5468835 None:intergenic 60.0%
GTTGCTGTGACTGCTACCGC+CGG + chr5_3:5468997-5469016 Msa0793500:CDS 60.0%
TTGCTGTGACTGCTACCGCC+GGG + chr5_3:5468998-5469017 Msa0793500:CDS 60.0%
! TATCTGGGATACTCCCCCGG+CGG - chr5_3:5469016-5469035 None:intergenic 60.0%
TGACAGGGCGGAGTTTGAGG+AGG + chr5_3:5469263-5469282 Msa0793500:CDS 60.0%
GCCTGGATCCCGTATACCTG+TGG + chr5_3:5469857-5469876 Msa0793500:CDS 60.0%
GAGCGTGCTTGTGCGATGGC+TGG + chr5_3:5468829-5468848 Msa0793500:CDS 65.0%
TGCTGTGACTGCTACCGCCG+GGG + chr5_3:5468999-5469018 Msa0793500:CDS 65.0%
GAGCGTGCTTGTGCGATGGC+TGG + chr5_3:5468829-5468848 Msa0793500:CDS 65.0%
TGCTGTGACTGCTACCGCCG+GGG + chr5_3:5468999-5469018 Msa0793500:CDS 65.0%
GCTGTGACTGCTACCGCCGG+GGG + chr5_3:5469000-5469019 Msa0793500:CDS 70.0%
GCTGTGACTGCTACCGCCGG+GGG + chr5_3:5469000-5469019 Msa0793500:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 5468277 5469995 5468277 ID=Msa0793500;Name=Msa0793500
chr5_3 mRNA 5468277 5469995 5468277 ID=Msa0793500-mRNA-1;Parent=Msa0793500;Name=Msa0793500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|572
chr5_3 exon 5468277 5469995 5468277 ID=Msa0793500-mRNA-1:exon:2082;Parent=Msa0793500-mRNA-1
chr5_3 CDS 5468277 5469995 5468277 ID=Msa0793500-mRNA-1:cds;Parent=Msa0793500-mRNA-1
Gene Sequence

>Msa0793500

ATGGCAGAACGAGAACCTGCATATACCGTTGCATCTGACACTGAAACAACTGGGGAGGAAAAATCATCACCTCTTCCTGAAATAGCGATTGGAATTGATATTGGCACCTCACAATGTAGTGTTGCTGTGTGGAATGGCTCCGAAGTGGAGCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAAGTCATTTGTGACTTTCAAAGACGAAGCTCCTTCTGGAGGAGTTACCAGTCAATTCTCCCACGACCATGAGATGCTGTTTGGAGATACAATTTTCAATATGAAACGCTTGATCGGCAGAGTTGATACTGACCCTGTGGTTCATGCAAGTAAAAATCTGCCATTTCTGGTGCAGACCTTGGACATTGGCGTTCGTCCATTTATTGCTGCGTTAGTGAACAATGTCTGGAGATCCACCACTCCAGAAGAAGTCCTTGCAATGTTTCTGGTGGAGTTAAGACTGATGACTGAAACTCATCTCAAACGACCGATAAGAAATGTGGTGCTTACTGTTCCGGTTTCATTCAGTCGTTTCCAGCTGACCCGTTTAGAGCGTGCTTGTGCGATGGCTGGTCTTCATGTTCTCAGGTTGATGCCTGAACCAACAGCAGTGGCGTTATTATATGGACAACAACAACAGAAAGCTTCTCAAGAAACTATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTGACTGCTACCGCCGGGGGAGTATCCCAGATAAAAGCATTGGCAGGAAGTACCATCGGTGGAGAAGATTTGGTTCAGAATATGATGTGTTATCTCTTACCAGATTCTGAAAATATATTCAAGCGTCATGGGGTCAAAGAAATTAAATCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCCACCCAAAGCAGTGTTCAGGTTGATGTAGATTTGGGAGATGGTTTGAAGATATGCAAGGTTGTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTGTTCGAAAAGTGTGAAAGCCTTATCATCCAATGTTTACATGATGCAAAGGTAGAAGTTGGGGATATAAATGATGTGATACTTGTTGGAGGATGTTCTTATATCCCAAGGGTGGAGAATCTTGTTACAACCTTATGCAAAATAACAGAAGTTTATAAAGGTATAAACCCTTTGGAAGGTGCGGTTTGTGGTGCAGCAATGGAAGGAGCTGTTGCTTCAGGCATCAGTGATCCCTTTGGAAACTTGGACTTGTTAACGATTCAAGCCACTCCTCTTGCCATTGGAATTCGAGCTGATGGGAACAAGTTTGTACCTGTAATTCCAAGGAACACCACAATGCCAGCACGTAAAGATCTACTTTTCACAACTATTCATGATAATCAAACTGAGGCATTGATACTTGTGTACGAAGGTGAGGGAAAGAAGGCAGAAGAAAACCACTTGTTAGGATATTTCAAGATAATGGGAATACCTGCAGCACCAAAAGGAGTTCCTGAAATCAGTGTGTGCATGGACATAGATGCTGCAAACGTGCTGCGAGTTTTAGCCGGTGTTGTGATGCCTGGATCCCGTATACCTGTGGTGCCTGTTATGGAAGTGAGGATGCCAATGGTTGATGATGGTCATGGTTGGTGTGCTGAGGCCCTAAATAGGACCTATGGTGCCACAATGGATTTGGTTACCCTCAAGAAGGCATAA
Protein sequence

>Msa0793500

MAEREPAYTVASDTETTGEEKSSPLPEIAIGIDIGTSQCSVAVWNGSEVELLKNKRNQKLMKSFVTFKDEAPSGGVTSQFSHDHEMLFGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVLAMFLVELRLMTETHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASQETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLVQNMMCYLLPDSENIFKRHGVKEIKSMALLRVATQDAIHQLSTQSSVQVDVDLGDGLKICKVVDRAEFEEVNKEVFEKCESLIIQCLHDAKVEVGDINDVILVGGCSYIPRVENLVTTLCKITEVYKGINPLEGAVCGAAMEGAVASGISDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGKKAEENHLLGYFKIMGIPAAPKGVPEISVCMDIDAANVLRVLAGVVMPGSRIPVVPVMEVRMPMVDDGHGWCAEALNRTYGATMDLVTLKKA*