AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795420 MtrunA17_Chr2g0328911 97.333 75 2 0 28 102 624 698 5.51e-46 158
Msa0795420 MtrunA17_Chr2g0322151 54.430 79 36 0 30 108 237 315 5.15e-21 86.7
Msa0795420 MtrunA17_Chr1g0184291 57.534 73 31 0 30 102 238 310 1.08e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795420 AT5G19620.1 81.333 75 14 0 28 102 608 682 7.88e-35 127
Msa0795420 AT3G44160.1 54.762 84 38 0 25 108 232 315 4.41e-22 90.1
Msa0795420 AT3G48620.1 51.064 94 38 3 25 114 165 254 2.58e-18 79.3

Find 217 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAACCTCTCACATATTTA+AGG 0.143428 5_3:+7362797 None:intergenic
ACTTTCCACTCACCCGTTAA+TGG 0.208512 5_3:+7364809 None:intergenic
ATATCAGTATTATACATATT+TGG 0.210882 5_3:-7373909 Msa0795420:CDS
CTCAAAATTAAAGCATGTTT+TGG 0.214988 5_3:-7363442 Msa0795420:three_prime_UTR
TTATAGATTGGGTTCTATAT+TGG 0.218702 5_3:-7363188 Msa0795420:three_prime_UTR
TCTTGAAAGATCCTCGTTAA+TGG 0.242729 5_3:+7364167 None:intergenic
CAGCGGATCGCTACGATAAC+TGG 0.249372 5_3:-7365534 Msa0795420:three_prime_UTR
ATAAGTCACGAAATATATTT+CGG 0.253236 5_3:-7362910 Msa0795420:three_prime_UTR
AGCATCGTCAACATCTTTAA+AGG 0.254895 5_3:-7365580 Msa0795420:three_prime_UTR
TAGAGGGACAATGGGATATT+TGG 0.257183 5_3:-7363371 Msa0795420:three_prime_UTR
GACAGGTTTCTTTCCGCTTC+AGG 0.265290 5_3:-7367044 Msa0795420:intron
GAAGAAGGCGGTGTGGGCTC+TGG 0.265858 5_3:-7368597 Msa0795420:three_prime_UTR
GAAGAAGGCGGTGTGGGCTC+TGG 0.265858 5_3:-7373562 Msa0795420:CDS
CTTTAAAGGGTTTGAGGCCT+TGG 0.269499 5_3:-7365566 Msa0795420:three_prime_UTR
TATAGATTGGGTTCTATATT+GGG 0.279264 5_3:-7363187 Msa0795420:three_prime_UTR
TAAGTCACGAAATATATTTC+GGG 0.283711 5_3:-7362909 Msa0795420:three_prime_UTR
CTAAACATTTACCTCAAATA+TGG 0.286952 5_3:+7373849 None:intergenic
TGAGATTGAAGAGGGTTGTT+AGG 0.287678 5_3:-7369046 Msa0795420:three_prime_UTR
CGATCGTATGTTGTTGGTTC+TGG 0.293847 5_3:-7368573 Msa0795420:three_prime_UTR
CGATCGTATGTTGTTGGTTC+TGG 0.293847 5_3:-7373538 Msa0795420:CDS
CTGATAGGAGAAAGAGAAAA+AGG 0.299654 5_3:+7362871 None:intergenic
TTGGGGATCTTGATGCCTTT+AGG 0.314468 5_3:-7366291 Msa0795420:three_prime_UTR
TCTGACTATGGAACTGATCT+TGG 0.318574 5_3:-7368283 Msa0795420:three_prime_UTR
TCTGACTATGGAACTGATCT+TGG 0.318574 5_3:-7373248 Msa0795420:CDS
GATGGCCTAATAGTTGGATT+AGG 0.320977 5_3:+7363060 None:intergenic
ATGAAGCCAGGAAAATTAAA+AGG 0.324337 5_3:+7364696 None:intergenic
CTTCTGCCTTGGAACCCTTC+AGG 0.326027 5_3:-7366085 Msa0795420:intron
CAACAGGCAGTGGCGGCATT+TGG 0.339764 5_3:+7364190 None:intergenic
TGCAACACCTTTGCAATAGA+TGG 0.340385 5_3:+7363042 None:intergenic
GAAGAAGGAACACGATAATA+TGG 0.342760 5_3:-7364293 Msa0795420:three_prime_UTR
GGGTGGCATTGCTGTACTTT+TGG 0.352817 5_3:-7365479 Msa0795420:three_prime_UTR
GAACTTACCTAAATTCTATT+AGG 0.360006 5_3:+7364135 None:intergenic
GGCTTCATTATAATGTGTAT+TGG 0.364749 5_3:-7364681 Msa0795420:three_prime_UTR
GCCTATATAGTTGGTGTTGT+TGG 0.365208 5_3:-7366186 Msa0795420:three_prime_UTR
TTAGCTTACAATTAACTGAT+AGG 0.365879 5_3:+7362856 None:intergenic
ACCAATGGCAAAAGCTTCAT+AGG 0.368303 5_3:+7368644 None:intergenic
ACCAATGGCAAAAGCTTCAT+AGG 0.368303 5_3:+7373609 None:intergenic
ATGACATGATACTTATAGAT+TGG 0.369608 5_3:-7363200 Msa0795420:three_prime_UTR
AAGTCGTTAATGATTTCATT+AGG 0.378871 5_3:-7363122 Msa0795420:three_prime_UTR
TGTGCCCTAATCCAACTATT+AGG 0.379826 5_3:-7363065 Msa0795420:three_prime_UTR
TCTATGAATTTCCATATTTG+AGG 0.380263 5_3:-7373860 Msa0795420:intron
GTTGACTTTCTCTCCATTAA+CGG 0.380344 5_3:-7364822 Msa0795420:three_prime_UTR
TGTGAAGCTTCAATTTATAC+AGG 0.388263 5_3:-7365219 Msa0795420:intron
GGAACAAATGGTGATGGATA+TGG 0.390681 5_3:-7365391 Msa0795420:three_prime_UTR
AGTGTTCCACCATTGTTTGA+TGG 0.394571 5_3:-7362994 Msa0795420:three_prime_UTR
TATGTCCATCTATCTCAAAA+TGG 0.400708 5_3:+7364462 None:intergenic
TTACTGGAACCTTTACCATT+GGG 0.402298 5_3:-7365629 Msa0795420:three_prime_UTR
GCATCGTCAACATCTTTAAA+GGG 0.410141 5_3:-7365579 Msa0795420:three_prime_UTR
CACCGGCATTATTGCAGCAT+TGG 0.411749 5_3:-7365500 Msa0795420:three_prime_UTR
GCAATAGATGGCCTAATAGT+TGG 0.413635 5_3:+7363054 None:intergenic
CATGTACTTGCAGCTATTGA+TGG 0.416147 5_3:+7364857 None:intergenic
TTGTTGAATGCAGTGAGCTT+GGG 0.419751 5_3:-7366309 Msa0795420:intron
CAACATCTTTAAAGGGTTTG+AGG 0.424624 5_3:-7365572 Msa0795420:three_prime_UTR
CACATGGATCATTGTGATCA+AGG 0.425681 5_3:-7365449 Msa0795420:three_prime_UTR
ATAAAATAAAGAGCAAGAAT+TGG 0.426186 5_3:+7362958 None:intergenic
TGGTAAACTGCCAGTCTCTC+TGG 0.427566 5_3:-7368693 Msa0795420:intron
TGGTAAACTGCCAGTCTCTC+TGG 0.427566 5_3:-7373658 Msa0795420:intron
ATGGCCTAATAGTTGGATTA+GGG 0.430405 5_3:+7363061 None:intergenic
TCTGGGCGATCGTATGTTGT+TGG 0.435307 5_3:-7368579 Msa0795420:three_prime_UTR
TCTGGGCGATCGTATGTTGT+TGG 0.435307 5_3:-7373544 Msa0795420:CDS
AATGCCAGGCATATCATAGA+AGG 0.435686 5_3:+7364218 None:intergenic
TAAAGGGTTTGAGGCCTTGG+AGG 0.436696 5_3:-7365563 Msa0795420:three_prime_UTR
ACCGGCATTATTGCAGCATT+GGG 0.442443 5_3:-7365499 Msa0795420:three_prime_UTR
AGCTCTATTTCTATCTGAAA+AGG 0.445760 5_3:-7364721 Msa0795420:three_prime_UTR
TTGACTTTCTCTCCATTAAC+GGG 0.446899 5_3:-7364821 Msa0795420:intron
ATTACTGGAACCTTTACCAT+TGG 0.446900 5_3:-7365630 Msa0795420:three_prime_UTR
AGATCCTCGTTAATGGCAAC+AGG 0.447502 5_3:+7364174 None:intergenic
AACAAGTTGCAAGGAATGAA+TGG 0.449100 5_3:-7365412 Msa0795420:three_prime_UTR
CCTTCACTGATGATAAAGTA+TGG 0.449579 5_3:+7367135 None:intergenic
GAAAATATCACACATTCTAA+TGG 0.451109 5_3:+7368304 None:intergenic
GAAAATATCACACATTCTAA+TGG 0.451109 5_3:+7373269 None:intergenic
TAGGTTTGAGAGAATGACTA+TGG 0.451333 5_3:-7363103 Msa0795420:three_prime_UTR
GAGATTGAAGAGGGTTGTTA+GGG 0.451816 5_3:-7369045 Msa0795420:intron
TAATGTGTATTGGAATCGCT+TGG 0.452334 5_3:-7364671 Msa0795420:three_prime_UTR
TGACATGATACTTATAGATT+GGG 0.452945 5_3:-7363199 Msa0795420:three_prime_UTR
TGGAGAAATTTGTTTCCCTA+TGG 0.453127 5_3:-7368553 Msa0795420:intron
TGGAGAAATTTGTTTCCCTA+TGG 0.453127 5_3:-7373518 Msa0795420:intron
TCTCAACCTCACCAGCTGAT+AGG 0.454244 5_3:+7365292 None:intergenic
TCTTTAACTAGCTATCACTA+TGG 0.455155 5_3:-7365346 Msa0795420:three_prime_UTR
TCTGTCTTTCATTAGCAGCT+TGG 0.455797 5_3:+7363414 None:intergenic
AAGAAGGCGGTGTGGGCTCT+GGG 0.459019 5_3:-7368596 Msa0795420:three_prime_UTR
AAGAAGGCGGTGTGGGCTCT+GGG 0.459019 5_3:-7373561 Msa0795420:CDS
TGTACGATGGTGTTTAAACT+TGG 0.459476 5_3:+7363501 None:intergenic
TAATTCAGAACTGAATAAAT+CGG 0.461335 5_3:-7366820 Msa0795420:three_prime_UTR
GGTTCTATATTGGGCAAAAG+AGG 0.465154 5_3:-7363178 Msa0795420:three_prime_UTR
TCCAACAACACCAACTATAT+AGG 0.465181 5_3:+7366185 None:intergenic
ATATAGTTGGTGTTGTTGGA+TGG 0.468787 5_3:-7366182 Msa0795420:three_prime_UTR
GGGATCATCCTCTTCTGCCT+TGG 0.469155 5_3:-7366096 Msa0795420:three_prime_UTR
ATGGGGTACCAGTGTCAAGC+TGG 0.469313 5_3:-7366163 Msa0795420:three_prime_UTR
GTCCAGGTAAAATGAAGCAC+TGG 0.472640 5_3:-7367635 Msa0795420:intron
AGAACAAGCACAAATGTTAG+AGG 0.472788 5_3:-7363388 Msa0795420:three_prime_UTR
ACAATATTAGTTGCTTTGAC+AGG 0.475132 5_3:-7367061 Msa0795420:three_prime_UTR
GCAAAAGTGGATTGCAAAAG+TGG 0.476992 5_3:-7363316 Msa0795420:three_prime_UTR
AGAATTAAAATGAAGGCTGT+TGG 0.480064 5_3:-7366508 Msa0795420:three_prime_UTR
CAATCAGCTGCCTATATAGT+TGG 0.487496 5_3:-7366195 Msa0795420:three_prime_UTR
TATAGTTGGTGTTGTTGGAT+GGG 0.488603 5_3:-7366181 Msa0795420:three_prime_UTR
TTATCATCAGTGAAGGTTCA+AGG 0.488974 5_3:-7367128 Msa0795420:three_prime_UTR
CAACTATATAGGCAGCTGAT+TGG 0.489184 5_3:+7366196 None:intergenic
GAGTTGCATCAAGTTGAAGA+TGG 0.493345 5_3:-7363237 Msa0795420:three_prime_UTR
TATTCCTTCTATGATATGCC+TGG 0.493880 5_3:-7364222 Msa0795420:three_prime_UTR
AACCTTTACCATTGGGGTGT+CGG 0.496844 5_3:-7365622 Msa0795420:three_prime_UTR
TATGGAACTGATCTTGGATC+AGG 0.496920 5_3:-7368277 Msa0795420:three_prime_UTR
TATGGAACTGATCTTGGATC+AGG 0.496920 5_3:-7373242 Msa0795420:CDS
AACAGAGCAAACATACTTTG+TGG 0.497241 5_3:-7362821 Msa0795420:three_prime_UTR
CTAGTTAAAGAAGGTTTGAT+CGG 0.497373 5_3:+7365358 None:intergenic
TCAAAACAGCAGACCCTGCT+TGG 0.497546 5_3:-7366239 Msa0795420:three_prime_UTR
TCGTTAATGGCAACAGGCAG+TGG 0.497673 5_3:+7364180 None:intergenic
TGCACCTATCACTGCAAAAG+TGG 0.498118 5_3:-7363329 Msa0795420:three_prime_UTR
AAAGTGGATATCTACAGCTT+TGG 0.498218 5_3:-7363300 Msa0795420:three_prime_UTR
GGCTATGAAGAAGGCGGTGT+GGG 0.499428 5_3:-7368603 Msa0795420:three_prime_UTR
GGCTATGAAGAAGGCGGTGT+GGG 0.499428 5_3:-7373568 Msa0795420:CDS
ATCCGACACCCCAATGGTAA+AGG 0.503836 5_3:+7365620 None:intergenic
AAAGTTTCTATAGATAAAGA+AGG 0.504229 5_3:+7364411 None:intergenic
GGCATTTGGCTCATAATGCC+AGG 0.504404 5_3:+7364204 None:intergenic
ACAAATGTTAGAGGGACAAT+GGG 0.506091 5_3:-7363379 Msa0795420:three_prime_UTR
TTTGAGAGAATGACTATGGT+TGG 0.507037 5_3:-7363099 Msa0795420:three_prime_UTR
GGATCAGGCTCGACTGTCCC+TGG 0.507315 5_3:-7368262 Msa0795420:intron
GGATCAGGCTCGACTGTCCC+TGG 0.507315 5_3:-7373227 Msa0795420:intron
AATGTGTATTGGAATCGCTT+GGG 0.508472 5_3:-7364670 Msa0795420:intron
GTTCTATATTGGGCAAAAGA+GGG 0.512150 5_3:-7363177 Msa0795420:three_prime_UTR
CAAGGAATGAATGGAACAAA+TGG 0.513242 5_3:-7365403 Msa0795420:three_prime_UTR
ATTGTTGAATGCAGTGAGCT+TGG 0.516397 5_3:-7366310 Msa0795420:intron
CTTGCAATCACAGCTCCTAA+AGG 0.525189 5_3:+7366276 None:intergenic
CACACTGTTCGTTCCACCAA+TGG 0.529102 5_3:+7368629 None:intergenic
CACACTGTTCGTTCCACCAA+TGG 0.529102 5_3:+7373594 None:intergenic
TAGTGATAGCTAGTTAAAGA+AGG 0.533712 5_3:+7365349 None:intergenic
CTTCATACTAAGAAAGAAGA+AGG 0.534068 5_3:-7364308 Msa0795420:three_prime_UTR
TGAAGCTTCACAAGCAGCCA+CGG 0.535067 5_3:+7365230 None:intergenic
TTAGAATTTGAGGCAGTGGA+GGG 0.535724 5_3:-7366920 Msa0795420:three_prime_UTR
CACAAATGTTAGAGGGACAA+TGG 0.540064 5_3:-7363380 Msa0795420:three_prime_UTR
ATAGTTGGTGTTGTTGGATG+GGG 0.542051 5_3:-7366180 Msa0795420:three_prime_UTR
CTTTAGGAGCTGTGATTGCA+AGG 0.545674 5_3:-7366275 Msa0795420:three_prime_UTR
TGATTGTGTAGGTATGAAGA+GGG 0.546154 5_3:-7369262 Msa0795420:intron
TGCAAAGGTGTTGCAGATGT+CGG 0.550893 5_3:-7363034 Msa0795420:three_prime_UTR
ACATGAAGGTAAAACCAAGC+AGG 0.551666 5_3:+7366225 None:intergenic
CATTAACGACTTCAACATCA+TGG 0.554782 5_3:+7363133 None:intergenic
CTTCAGACTCTCCTATCAGC+TGG 0.555801 5_3:-7365303 Msa0795420:three_prime_UTR
ACATGGATCATTGTGATCAA+GGG 0.556201 5_3:-7365448 Msa0795420:three_prime_UTR
TAGTAAAATGAGATTGAAGA+GGG 0.556603 5_3:-7369054 Msa0795420:exon
TGTGATTGCAAGGTACTTGA+AGG 0.556632 5_3:-7366265 Msa0795420:three_prime_UTR
TACTGGAACCTTTACCATTG+GGG 0.557881 5_3:-7365628 Msa0795420:three_prime_UTR
TGATGTCAGAATTAAAATGA+AGG 0.558814 5_3:-7366515 Msa0795420:three_prime_UTR
GTCATACCTGAAGGGTTCCA+AGG 0.560992 5_3:+7366079 None:intergenic
ATGAATGGAACAAATGGTGA+TGG 0.561375 5_3:-7365397 Msa0795420:three_prime_UTR
GACTCTCCTATCAGCTGGTG+AGG 0.561561 5_3:-7365298 Msa0795420:three_prime_UTR
GGCATTATTGCAGCATTGGG+TGG 0.561938 5_3:-7365496 Msa0795420:three_prime_UTR
ATACACATTATAATGAAGCC+AGG 0.562281 5_3:+7364684 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 5_3:-7369263 Msa0795420:intron
TAAAATGAAGCACTGGGAGA+TGG 0.566529 5_3:-7367628 Msa0795420:three_prime_UTR
GAAGGGTTCCAAGGCAGAAG+AGG 0.567005 5_3:+7366088 None:intergenic
TCCATCTATCTCAAAATGGA+AGG 0.567441 5_3:+7364466 None:intergenic
TTTAGAATTTGAGGCAGTGG+AGG 0.567604 5_3:-7366921 Msa0795420:three_prime_UTR
GTAGTAAAATGAGATTGAAG+AGG 0.570122 5_3:-7369055 Msa0795420:exon
ATCCGCTGCAGACACCTCCA+AGG 0.570140 5_3:+7365549 None:intergenic
ATGAAGGCTGTTGGAATCTG+TGG 0.572330 5_3:-7366499 Msa0795420:three_prime_UTR
CAAGTTGAAGATGGAACAGA+AGG 0.575586 5_3:-7363228 Msa0795420:three_prime_UTR
AAATCTTGTGCAAAATGAGA+AGG 0.576750 5_3:-7366890 Msa0795420:three_prime_UTR
TGGGATATTTGGCACCAGAA+TGG 0.579107 5_3:-7363360 Msa0795420:three_prime_UTR
TATTCAACTCATAGAACACT+CGG 0.580467 5_3:-7366117 Msa0795420:three_prime_UTR
CTTTAATTGTGCTTCTGATG+AGG 0.580908 5_3:-7364386 Msa0795420:three_prime_UTR
GGCCTTGGAGGTGTCTGCAG+CGG 0.586267 5_3:-7365551 Msa0795420:three_prime_UTR
CAGTCTCTCTGGTGGTCATG+TGG 0.586921 5_3:-7368682 Msa0795420:three_prime_UTR
CAGTCTCTCTGGTGGTCATG+TGG 0.586921 5_3:-7373647 Msa0795420:CDS
TGTTGAATGCAGTGAGCTTG+GGG 0.586957 5_3:-7366308 Msa0795420:intron
CTGAAGAGTACCTTTGATGA+TGG 0.587300 5_3:+7365320 None:intergenic
CTCTCTGGTGGTCATGTGGT+AGG 0.589324 5_3:-7368678 Msa0795420:three_prime_UTR
CTCTCTGGTGGTCATGTGGT+AGG 0.589324 5_3:-7373643 Msa0795420:CDS
GTCACTTCCCAGCTTGACAC+TGG 0.590603 5_3:+7366155 None:intergenic
GAAGCTTCACAAGCAGCCAC+GGG 0.591352 5_3:+7365231 None:intergenic
AACTGGAAGCATGCATACAC+CGG 0.591645 5_3:-7365517 Msa0795420:three_prime_UTR
AGTGTGAGAGGCTATGAAGA+AGG 0.592683 5_3:-7368612 Msa0795420:three_prime_UTR
AGTGTGAGAGGCTATGAAGA+AGG 0.592683 5_3:-7373577 Msa0795420:CDS
CTGATTGGCATGTAACATGA+AGG 0.594508 5_3:+7366211 None:intergenic
TCAGAGTATGATGCTTAGAG+TGG 0.595054 5_3:-7364491 Msa0795420:three_prime_UTR
GTTTGAAGTGTTATCAGACA+TGG 0.596212 5_3:+7365257 None:intergenic
TGGGGTACCAGTGTCAAGCT+GGG 0.597010 5_3:-7366162 Msa0795420:three_prime_UTR
TTCTATATTGGGCAAAAGAG+GGG 0.600711 5_3:-7363176 Msa0795420:three_prime_UTR
CCATACTTTATCATCAGTGA+AGG 0.601838 5_3:-7367135 Msa0795420:three_prime_UTR
CATGGATCATTGTGATCAAG+GGG 0.602789 5_3:-7365447 Msa0795420:three_prime_UTR
CCAATGGCAAAAGCTTCATA+GGG 0.603793 5_3:+7368645 None:intergenic
CCAATGGCAAAAGCTTCATA+GGG 0.603793 5_3:+7373610 None:intergenic
GTGCTTCTGATGAGGAAGAA+AGG 0.605953 5_3:-7364378 Msa0795420:three_prime_UTR
AAATCAGAGAACAAGTTGCA+AGG 0.608640 5_3:-7365421 Msa0795420:three_prime_UTR
ACCCAATGCTGCAATAATGC+CGG 0.613184 5_3:+7365498 None:intergenic
AAAGATGTTGACGATGCTGA+TGG 0.614883 5_3:+7365585 None:intergenic
AAGGTGTTGCAGATGTCGGA+AGG 0.614948 5_3:-7363030 Msa0795420:three_prime_UTR
TTGCGTATCCGACACCCCAA+TGG 0.617721 5_3:+7365614 None:intergenic
ACTATGGCCACCATCATCAA+AGG 0.619655 5_3:-7365330 Msa0795420:three_prime_UTR
TATTAGGCCATCTATTGCAA+AGG 0.622506 5_3:-7363049 Msa0795420:three_prime_UTR
GGTGGAACGAACAGTGTGAG+AGG 0.622539 5_3:-7368624 Msa0795420:three_prime_UTR
GGTGGAACGAACAGTGTGAG+AGG 0.622539 5_3:-7373589 Msa0795420:CDS
TCCAGGTAAAATGAAGCACT+GGG 0.622821 5_3:-7367634 Msa0795420:intron
GAGGGTTAGAGAAACTGTTG+AGG 0.623078 5_3:-7369244 Msa0795420:CDS
AAGCTGGGAAGTGACTTAGC+TGG 0.624386 5_3:-7366147 Msa0795420:three_prime_UTR
GTGGTCCTTAAATATGTGAG+AGG 0.625201 5_3:-7362802 Msa0795420:three_prime_UTR
GAACAAGCACAAATGTTAGA+GGG 0.627687 5_3:-7363387 Msa0795420:three_prime_UTR
CATGTAATGTCATACCTGAA+GGG 0.633570 5_3:+7366071 None:intergenic
GAGTGATGTTCACCACCTCA+AGG 0.633969 5_3:-7366476 Msa0795420:intron
GTTGAAGATGGAACAGAAGG+TGG 0.634859 5_3:-7363225 Msa0795420:three_prime_UTR
CATGAAGGTAAAACCAAGCA+GGG 0.639212 5_3:+7366226 None:intergenic
TAGAATTTGAGGCAGTGGAG+GGG 0.643151 5_3:-7366919 Msa0795420:three_prime_UTR
AGGCTATGAAGAAGGCGGTG+TGG 0.643174 5_3:-7368604 Msa0795420:three_prime_UTR
AGGCTATGAAGAAGGCGGTG+TGG 0.643174 5_3:-7373569 Msa0795420:CDS
TTAATGGCAACAGGCAGTGG+CGG 0.648108 5_3:+7364183 None:intergenic
TAAACTGCCAGTCTCTCTGG+TGG 0.648318 5_3:-7368690 Msa0795420:intron
TAAACTGCCAGTCTCTCTGG+TGG 0.648318 5_3:-7373655 Msa0795420:intron
TGAAGGCTGTTGGAATCTGT+GGG 0.663062 5_3:-7366498 Msa0795420:three_prime_UTR
AAGAGTACCTTTGATGATGG+TGG 0.669893 5_3:+7365323 None:intergenic
ATTCAACTCATAGAACACTC+GGG 0.675546 5_3:-7366116 Msa0795420:three_prime_UTR
GAAGGAACACGATAATATGG+TGG 0.676501 5_3:-7364290 Msa0795420:three_prime_UTR
TAACACTTCAAACATGCCCG+TGG 0.679330 5_3:-7365247 Msa0795420:three_prime_UTR
GTGAGAGGCTATGAAGAAGG+CGG 0.695715 5_3:-7368609 Msa0795420:three_prime_UTR
GTGAGAGGCTATGAAGAAGG+CGG 0.695715 5_3:-7373574 Msa0795420:CDS
AATGGAGAGAAAGTCAACAG+TGG 0.709474 5_3:+7364827 None:intergenic
ACTGCCTGTTGCCATTAACG+AGG 0.709980 5_3:-7364178 Msa0795420:three_prime_UTR
GAATGACTATGGTTGGACTG+TGG 0.741878 5_3:-7363092 Msa0795420:three_prime_UTR
ATATGCAAGAAAGTGTACGA+TGG 0.782498 5_3:+7363488 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTATAAATATATTT+AGG + chr5_3:7366054-7366073 None:intergenic 0.0%
!!! TAAAAGTATATAAAGTATTA+GGG - chr5_3:7363688-7363707 Msa0795420:intron 10.0%
!! AATATTTAATTCATATGATT+TGG + chr5_3:7365647-7365666 None:intergenic 10.0%
!! TTTAAATAAAATAAGAGTTT+AGG - chr5_3:7365719-7365738 Msa0795420:intron 10.0%
!! AAACTATTTATAAAAGTTAA+TGG - chr5_3:7366754-7366773 Msa0795420:intron 10.0%
!!! TAAAAGTATATAAAGTATTA+GGG - chr5_3:7363688-7363707 Msa0795420:intron 10.0%
!! ATATCAGTATTATACATATT+TGG - chr5_3:7362810-7362829 Msa0795420:three_prime_UTR 15.0%
!!! ATTGATTTAAATAGCAATAA+TGG + chr5_3:7362960-7362979 None:intergenic 15.0%
!!! AATAAAATTAAAGTACCATA+GGG + chr5_3:7363219-7363238 None:intergenic 15.0%
!!! TAATAAAATTAAAGTACCAT+AGG + chr5_3:7363220-7363239 None:intergenic 15.0%
!!! CTAAAAGTATATAAAGTATT+AGG - chr5_3:7363687-7363706 Msa0795420:intron 15.0%
!!! TTTTTTGAAGTAATTTAGAA+TGG + chr5_3:7363873-7363892 None:intergenic 15.0%
!! AAGAATTAAGATTTAACTAA+AGG + chr5_3:7364090-7364109 None:intergenic 15.0%
!!! ATAACACTTGATTTTTTTTT+TGG - chr5_3:7365696-7365715 Msa0795420:intron 15.0%
!! AATGATGAAAATTCTTAAAT+AGG + chr5_3:7366179-7366198 None:intergenic 15.0%
!!! TTTAAGAATTTTCATCATTT+TGG - chr5_3:7366180-7366199 Msa0795420:three_prime_UTR 15.0%
!!! TATTTTCGTAATTCATTTAT+TGG - chr5_3:7366810-7366829 Msa0795420:three_prime_UTR 15.0%
!!! TTTGATTTTATTTGTTTTTC+AGG - chr5_3:7367588-7367607 Msa0795420:three_prime_UTR 15.0%
!!! ATTGATTTAAATAGCAATAA+TGG + chr5_3:7362960-7362979 None:intergenic 15.0%
!!! AATAAAATTAAAGTACCATA+GGG + chr5_3:7363219-7363238 None:intergenic 15.0%
!!! TAATAAAATTAAAGTACCAT+AGG + chr5_3:7363220-7363239 None:intergenic 15.0%
!!! CTAAAAGTATATAAAGTATT+AGG - chr5_3:7363687-7363706 Msa0795420:intron 15.0%
!!! TTTTTTGAAGTAATTTAGAA+TGG + chr5_3:7363873-7363892 None:intergenic 15.0%
!! AAGAATTAAGATTTAACTAA+AGG + chr5_3:7364090-7364109 None:intergenic 15.0%
!! TAAGTTTATTGTTAATGATT+TGG - chr5_3:7369960-7369979 Msa0795420:intron 15.0%
!! TAGCATTTATAGAAAAAAAT+TGG + chr5_3:7371645-7371664 None:intergenic 15.0%
!!! TATGCAAATCATTTTAAAAA+AGG + chr5_3:7373008-7373027 None:intergenic 15.0%
!!! TTCTCATATAATTTTTTCAA+AGG + chr5_3:7373072-7373091 None:intergenic 15.0%
!!! TATGTTTTTCTGACTTTAAT+TGG - chr5_3:7363041-7363060 Msa0795420:three_prime_UTR 20.0%
!!! AAGAGTTAATTTTGTGAAAT+TGG - chr5_3:7363609-7363628 Msa0795420:intron 20.0%
!!! AGAGTTAATTTTGTGAAATT+GGG - chr5_3:7363610-7363629 Msa0795420:intron 20.0%
!! GTTATTATTGAATTGATACT+TGG - chr5_3:7363945-7363964 Msa0795420:intron 20.0%
!!! TTGTGTATATATTTTTTGTC+AGG - chr5_3:7364801-7364820 Msa0795420:intron 20.0%
!!! TGTTTCTTTTTTAGAATTTG+AGG - chr5_3:7364824-7364843 Msa0795420:three_prime_UTR 20.0%
!! TAATTCAGAACTGAATAAAT+CGG - chr5_3:7364934-7364953 Msa0795420:intron 20.0%
!! TGGATTAAGTTTATTGTTAA+AGG - chr5_3:7364990-7365009 Msa0795420:intron 20.0%
!! ATGATAGGAATAATTAGAAT+GGG + chr5_3:7365105-7365124 None:intergenic 20.0%
!!! TTTTGTTATGATATGATGAT+AGG + chr5_3:7365120-7365139 None:intergenic 20.0%
!!! TGTTTGGGAATTAAAATTTT+CGG + chr5_3:7365169-7365188 None:intergenic 20.0%
!! TGTATTAAACAAAATGTTCA+TGG - chr5_3:7365579-7365598 Msa0795420:three_prime_UTR 20.0%
!! TATGTAACCAAAAAAAGATT+TGG + chr5_3:7365609-7365628 None:intergenic 20.0%
!!! TTCATATGATTTGGTTTTAA+CGG + chr5_3:7365638-7365657 None:intergenic 20.0%
!! TTAAAGACTGATTGTAATTA+GGG + chr5_3:7365896-7365915 None:intergenic 20.0%
!! TTTAAAGACTGATTGTAATT+AGG + chr5_3:7365897-7365916 None:intergenic 20.0%
!! ATAATGAATTGAAAGATTGA+AGG + chr5_3:7367074-7367093 None:intergenic 20.0%
!!! ATTTTTCTGATATTCTGAAT+TGG - chr5_3:7367632-7367651 Msa0795420:three_prime_UTR 20.0%
!!! TTTTTCTGATATTCTGAATT+GGG - chr5_3:7367633-7367652 Msa0795420:intron 20.0%
!!! TATGTTTTTCTGACTTTAAT+TGG - chr5_3:7363041-7363060 Msa0795420:three_prime_UTR 20.0%
!!! AAGAGTTAATTTTGTGAAAT+TGG - chr5_3:7363609-7363628 Msa0795420:intron 20.0%
!!! AGAGTTAATTTTGTGAAATT+GGG - chr5_3:7363610-7363629 Msa0795420:intron 20.0%
!! GTTATTATTGAATTGATACT+TGG - chr5_3:7363945-7363964 Msa0795420:intron 20.0%
!!! TTGTGTATATATTTTTTGTC+AGG - chr5_3:7364801-7364820 Msa0795420:intron 20.0%
!!! TGTTTCTTTTTTAGAATTTG+AGG - chr5_3:7364824-7364843 Msa0795420:three_prime_UTR 20.0%
!! TAATTCAGAACTGAATAAAT+CGG - chr5_3:7364934-7364953 Msa0795420:intron 20.0%
!!! TATTGTTAATGATTTGGTTT+TGG - chr5_3:7369966-7369985 Msa0795420:intron 20.0%
!! TAAAATTCAAACTTGAAATG+TGG - chr5_3:7370068-7370087 Msa0795420:intron 20.0%
!! AAATCTCATTGTTATATCAT+TGG - chr5_3:7370149-7370168 Msa0795420:intron 20.0%
!!! TACATCTGATTATTTTTTTC+AGG - chr5_3:7370282-7370301 Msa0795420:intron 20.0%
!!! AAAAAGAAGTTTTAGACTTT+AGG + chr5_3:7371539-7371558 None:intergenic 20.0%
!! TTAAACAAAAGCTTGAAAAA+AGG + chr5_3:7371584-7371603 None:intergenic 20.0%
!!! CAAGCTTTTGTTTAAATTTA+TGG - chr5_3:7371589-7371608 Msa0795420:intron 20.0%
!! AAGAAAGAATCATACAAATA+TGG + chr5_3:7372151-7372170 None:intergenic 20.0%
!! AAAGTTTCTATAGATAAAGA+AGG + chr5_3:7372311-7372330 None:intergenic 20.0%
!! ATTTCATTAAATAATGCACT+TGG + chr5_3:7372684-7372703 None:intergenic 20.0%
!!! ATTGATTTACCTAATTAGTT+TGG - chr5_3:7372759-7372778 Msa0795420:intron 20.0%
!!! TTGAAATCTTATTTTGTAGA+AGG - chr5_3:7373453-7373472 Msa0795420:intron 20.0%
!!! AAAATTTTTCCATCAAACAA+TGG + chr5_3:7373737-7373756 None:intergenic 20.0%
!! ATAAAATAAAGAGCAAGAAT+TGG + chr5_3:7373764-7373783 None:intergenic 20.0%
!! ATAAGTCACGAAATATATTT+CGG - chr5_3:7373809-7373828 Msa0795420:intron 20.0%
! TCTATGAATTTCCATATTTG+AGG - chr5_3:7362859-7362878 Msa0795420:three_prime_UTR 25.0%
! CTAAACATTTACCTCAAATA+TGG + chr5_3:7362873-7362892 None:intergenic 25.0%
! AAGTGAGTATCTTGAAAATT+AGG + chr5_3:7363294-7363313 None:intergenic 25.0%
! GAAAATATCACACATTCTAA+TGG + chr5_3:7363453-7363472 None:intergenic 25.0%
! AATAGTACTTATGTGCATAT+GGG + chr5_3:7363578-7363597 None:intergenic 25.0%
! TAATAGTACTTATGTGCATA+TGG + chr5_3:7363579-7363598 None:intergenic 25.0%
!! TTAATTTTGTGAAATTGGGT+GGG - chr5_3:7363614-7363633 Msa0795420:intron 25.0%
! ACACAAAAGTAAGTAAGATT+GGG + chr5_3:7364066-7364085 None:intergenic 25.0%
!!! AGAAGCATTTGTAAAATTGA+AGG + chr5_3:7364337-7364356 None:intergenic 25.0%
!! GTTGTAGAAAAGTATAATGA+TGG + chr5_3:7364432-7364451 None:intergenic 25.0%
! TCATTTGAATTATCCATAAC+AGG - chr5_3:7364500-7364519 Msa0795420:three_prime_UTR 25.0%
! ACCTACTCTTATATATTTGT+TGG - chr5_3:7364564-7364583 Msa0795420:intron 25.0%
! CCTACTCTTATATATTTGTT+GGG - chr5_3:7364565-7364584 Msa0795420:intron 25.0%
! AGTTAAATGTGCAATTATAG+TGG + chr5_3:7365075-7365094 None:intergenic 25.0%
! GATGATAGGAATAATTAGAA+TGG + chr5_3:7365106-7365125 None:intergenic 25.0%
!! GGAATTAAAATTTTCGGAAA+GGG + chr5_3:7365163-7365182 None:intergenic 25.0%
!!! TGGAAAACCAAATCTTTTTT+TGG - chr5_3:7365599-7365618 Msa0795420:three_prime_UTR 25.0%
!! GCTCATTTTGTATTGTATAT+TGG - chr5_3:7366406-7366425 Msa0795420:intron 25.0%
! ATATTACGCAAATTCTGTAT+AGG - chr5_3:7366643-7366662 Msa0795420:intron 25.0%
! TATTACGCAAATTCTGTATA+GGG - chr5_3:7366644-7366663 Msa0795420:intron 25.0%
!! ATATGGACAAAAAGTACATT+CGG - chr5_3:7366705-7366724 Msa0795420:intron 25.0%
!! GGGTATATATATCACAATTT+TGG - chr5_3:7366843-7366862 Msa0795420:three_prime_UTR 25.0%
! AATGAATAATCACACATGTA+TGG - chr5_3:7367137-7367156 Msa0795420:three_prime_UTR 25.0%
! TTCAATGTAAAGCAAAACAA+TGG + chr5_3:7367561-7367580 None:intergenic 25.0%
! TAGTAAAATGAGATTGAAGA+GGG - chr5_3:7367665-7367684 Msa0795420:intron 25.0%
! TCTATGAATTTCCATATTTG+AGG - chr5_3:7362859-7362878 Msa0795420:three_prime_UTR 25.0%
! CTAAACATTTACCTCAAATA+TGG + chr5_3:7362873-7362892 None:intergenic 25.0%
! AAGTGAGTATCTTGAAAATT+AGG + chr5_3:7363294-7363313 None:intergenic 25.0%
! GAAAATATCACACATTCTAA+TGG + chr5_3:7363453-7363472 None:intergenic 25.0%
! AATAGTACTTATGTGCATAT+GGG + chr5_3:7363578-7363597 None:intergenic 25.0%
! TAATAGTACTTATGTGCATA+TGG + chr5_3:7363579-7363598 None:intergenic 25.0%
!! TTAATTTTGTGAAATTGGGT+GGG - chr5_3:7363614-7363633 Msa0795420:intron 25.0%
! ACACAAAAGTAAGTAAGATT+GGG + chr5_3:7364066-7364085 None:intergenic 25.0%
!!! AGAAGCATTTGTAAAATTGA+AGG + chr5_3:7364337-7364356 None:intergenic 25.0%
!! GTTGTAGAAAAGTATAATGA+TGG + chr5_3:7364432-7364451 None:intergenic 25.0%
! TCATTTGAATTATCCATAAC+AGG - chr5_3:7364500-7364519 Msa0795420:three_prime_UTR 25.0%
! ACCTACTCTTATATATTTGT+TGG - chr5_3:7364564-7364583 Msa0795420:intron 25.0%
! CCTACTCTTATATATTTGTT+GGG - chr5_3:7364565-7364584 Msa0795420:intron 25.0%
!! ACTTCATTTTGTATGTTTGA+AGG - chr5_3:7370175-7370194 Msa0795420:intron 25.0%
!!! ATTTTAATTCTGACATCATG+GGG + chr5_3:7370202-7370221 None:intergenic 25.0%
!!! CATTTTAATTCTGACATCAT+GGG + chr5_3:7370203-7370222 None:intergenic 25.0%
!!! TCATTTTAATTCTGACATCA+TGG + chr5_3:7370204-7370223 None:intergenic 25.0%
! TGATGTCAGAATTAAAATGA+AGG - chr5_3:7370204-7370223 Msa0795420:intron 25.0%
!! CTGGTTTACTTCATTTTATT+TGG - chr5_3:7370339-7370358 Msa0795420:intron 25.0%
!!! CTTCATTTTATTTGGTGATT+TGG - chr5_3:7370347-7370366 Msa0795420:intron 25.0%
!!! TTAATTGTTTTTCTGACTCA+TGG - chr5_3:7370386-7370405 Msa0795420:intron 25.0%
!!! TGCTTTAAAAAAGAGAGAAA+AGG + chr5_3:7371774-7371793 None:intergenic 25.0%
! AGAAATAAAAATAGAGAGCA+TGG + chr5_3:7372101-7372120 None:intergenic 25.0%
! TTCTTTCTTGTCTGATTATA+TGG - chr5_3:7372162-7372181 Msa0795420:intron 25.0%
!!! GATTAATTTTTGTTTGCAGA+TGG - chr5_3:7372195-7372214 Msa0795420:intron 25.0%
!! CATTTTGCCTAATAGAATTT+AGG - chr5_3:7372577-7372596 Msa0795420:intron 25.0%
! GAACTTACCTAAATTCTATT+AGG + chr5_3:7372587-7372606 None:intergenic 25.0%
! ATAGAATTTAGGTAAGTTCT+TGG - chr5_3:7372588-7372607 Msa0795420:intron 25.0%
! ACTTGGACACAAAAAAAAAA+TGG + chr5_3:7372667-7372686 None:intergenic 25.0%
! CAATTAATTGAAACATAGTG+TGG + chr5_3:7372743-7372762 None:intergenic 25.0%
! TTCAAACTTCCAAACTAATT+AGG + chr5_3:7372771-7372790 None:intergenic 25.0%
! CTAATTTCAACTTATTAGGA+AGG + chr5_3:7372821-7372840 None:intergenic 25.0%
! CACACTAATTTCAACTTATT+AGG + chr5_3:7372825-7372844 None:intergenic 25.0%
!! CTAATAAGTTGAAATTAGTG+TGG - chr5_3:7372823-7372842 Msa0795420:intron 25.0%
!!! ATTAGTGTGGTTTTTCAATT+TGG - chr5_3:7372836-7372855 Msa0795420:intron 25.0%
! ATAGTATGAGCTAATAATCA+CGG - chr5_3:7372896-7372915 Msa0795420:intron 25.0%
!! TGCATATTCATTATGCATTT+TGG - chr5_3:7373022-7373041 Msa0795420:intron 25.0%
!! CTCAAAATTAAAGCATGTTT+TGG - chr5_3:7373277-7373296 Msa0795420:CDS 25.0%
!!! AATTAAAGCATGTTTTGGAA+TGG - chr5_3:7373282-7373301 Msa0795420:intron 25.0%
! ATGACATGATACTTATAGAT+TGG - chr5_3:7373519-7373538 Msa0795420:CDS 25.0%
! TGACATGATACTTATAGATT+GGG - chr5_3:7373520-7373539 Msa0795420:CDS 25.0%
! TTATAGATTGGGTTCTATAT+TGG - chr5_3:7373531-7373550 Msa0795420:CDS 25.0%
! TATAGATTGGGTTCTATATT+GGG - chr5_3:7373532-7373551 Msa0795420:CDS 25.0%
! AAGTCGTTAATGATTTCATT+AGG - chr5_3:7373597-7373616 Msa0795420:CDS 25.0%
! TAAGTCACGAAATATATTTC+GGG - chr5_3:7373810-7373829 Msa0795420:intron 25.0%
!!! AATATATTTCGGGTTTTTCA+TGG - chr5_3:7373820-7373839 Msa0795420:intron 25.0%
! TTAGCTTACAATTAACTGAT+AGG + chr5_3:7373866-7373885 None:intergenic 25.0%
TTCAACAAACAGGACAATAA+GGG + chr5_3:7362917-7362936 None:intergenic 30.0%
ATTCAACAAACAGGACAATA+AGG + chr5_3:7362918-7362937 None:intergenic 30.0%
TAAGCAAGAATTCAACAAAC+AGG + chr5_3:7362927-7362946 None:intergenic 30.0%
! GTTTGTTGAATTCTTGCTTA+TGG - chr5_3:7362927-7362946 Msa0795420:three_prime_UTR 30.0%
AACAAATTTCATATTCAGCC+AGG + chr5_3:7363324-7363343 None:intergenic 30.0%
! TGTGTGATATTTTCTGACTA+TGG - chr5_3:7363459-7363478 Msa0795420:three_prime_UTR 30.0%
AATGAAATAAAGACCTACCA+GGG + chr5_3:7363512-7363531 None:intergenic 30.0%
AAATGAAATAAAGACCTACC+AGG + chr5_3:7363513-7363532 None:intergenic 30.0%
! GTTAATTTTGTGAAATTGGG+TGG - chr5_3:7363613-7363632 Msa0795420:intron 30.0%
CTCTGTTCATACAAATTTGA+AGG + chr5_3:7363720-7363739 None:intergenic 30.0%
GCTTATATTCATGTGATTTC+TGG - chr5_3:7363778-7363797 Msa0795420:intron 30.0%
! TATATTCATGTGATTTCTGG+AGG - chr5_3:7363781-7363800 Msa0795420:intron 30.0%
GAATTGATACTTGGTTGTAA+TGG - chr5_3:7363954-7363973 Msa0795420:intron 30.0%
!! TTGGTTGTAATGGATTAGTA+TGG - chr5_3:7363964-7363983 Msa0795420:intron 30.0%
!! TGGTTGTAATGGATTAGTAT+GGG - chr5_3:7363965-7363984 Msa0795420:intron 30.0%
CACACAAAAGTAAGTAAGAT+TGG + chr5_3:7364067-7364086 None:intergenic 30.0%
TTTACAAATGCTTCTACTGT+TGG - chr5_3:7364342-7364361 Msa0795420:three_prime_UTR 30.0%
ACTGTTAGAATGAGTAAACA+TGG - chr5_3:7364372-7364391 Msa0795420:three_prime_UTR 30.0%
!!! ATGGTTTTGAAAGATAGACA+TGG - chr5_3:7364391-7364410 Msa0795420:three_prime_UTR 30.0%
TAATATCTTTACGCCTGTTA+TGG + chr5_3:7364516-7364535 None:intergenic 30.0%
CCCAACAAATATATAAGAGT+AGG + chr5_3:7364568-7364587 None:intergenic 30.0%
! TTATATATTTGTTGGGTTGC+AGG - chr5_3:7364572-7364591 Msa0795420:intron 30.0%
! GAATCCATCTTTGTAGTTTT+TGG - chr5_3:7364594-7364613 Msa0795420:intron 30.0%
! ACAATATTAGTTGCTTTGAC+AGG - chr5_3:7364693-7364712 Msa0795420:three_prime_UTR 30.0%
AAAAAGTGAAATACCTGAAG+CGG + chr5_3:7364726-7364745 None:intergenic 30.0%
CAACATCAGAACAACAAAAA+AGG + chr5_3:7364756-7364775 None:intergenic 30.0%
!!! TTTTTTAGAATTTGAGGCAG+TGG - chr5_3:7364830-7364849 Msa0795420:three_prime_UTR 30.0%
AAATCTTGTGCAAAATGAGA+AGG - chr5_3:7364864-7364883 Msa0795420:three_prime_UTR 30.0%
TTATAGTGGTAGTAGTATAG+TGG + chr5_3:7365061-7365080 None:intergenic 30.0%
GGAATAATTAGAATGGGAAT+TGG + chr5_3:7365099-7365118 None:intergenic 30.0%
! GGGAATTAAAATTTTCGGAA+AGG + chr5_3:7365164-7365183 None:intergenic 30.0%
CTTGTAAAGATAGTGCATAA+TGG + chr5_3:7365197-7365216 None:intergenic 30.0%
CATTATGCACTATCTTTACA+AGG - chr5_3:7365195-7365214 Msa0795420:intron 30.0%
! ATTTGAACCTTTTGCTTCAT+TGG - chr5_3:7365279-7365298 Msa0795420:three_prime_UTR 30.0%
TCCACTAATTTCAGATACTT+TGG - chr5_3:7365332-7365351 Msa0795420:three_prime_UTR 30.0%
AATTATTGTTACTGGTGTTC+AGG + chr5_3:7365426-7365445 None:intergenic 30.0%
AGCTTACGAATTATTGTTAC+TGG + chr5_3:7365434-7365453 None:intergenic 30.0%
!!! TTTTTTGTTTAGTAGCCTAG+TGG - chr5_3:7365750-7365769 Msa0795420:intron 30.0%
! ATTTTAAATGTGGAGAAGTG+AGG - chr5_3:7365786-7365805 Msa0795420:intron 30.0%
!!! ACGAGAGAAACACAATTTTT+TGG - chr5_3:7366205-7366224 Msa0795420:three_prime_UTR 30.0%
TTTGACAATGTTTGGCAAAT+GGG + chr5_3:7366345-7366364 None:intergenic 30.0%
! TTTTGACAATGTTTGGCAAA+TGG + chr5_3:7366346-7366365 None:intergenic 30.0%
! TTCTCTCTTTTGACAATGTT+TGG + chr5_3:7366353-7366372 None:intergenic 30.0%
AAACATTGTCAAAAGAGAGA+AGG - chr5_3:7366352-7366371 Msa0795420:intron 30.0%
TCAAAACACGCATAAATACA+AGG - chr5_3:7366535-7366554 Msa0795420:intron 30.0%
ATTACGCAAATTCTGTATAG+GGG - chr5_3:7366645-7366664 Msa0795420:intron 30.0%
TCATTTATTGGACTTGCATA+TGG - chr5_3:7366822-7366841 Msa0795420:three_prime_UTR 30.0%
CATTTATTGGACTTGCATAT+GGG - chr5_3:7366823-7366842 Msa0795420:three_prime_UTR 30.0%
! TTTGCATGATGATTTTCATG+GGG + chr5_3:7366957-7366976 None:intergenic 30.0%
! GTTTGCATGATGATTTTCAT+GGG + chr5_3:7366958-7366977 None:intergenic 30.0%
! AGTTTGCATGATGATTTTCA+TGG + chr5_3:7366959-7366978 None:intergenic 30.0%
TGATGATTAATCCATCATGA+GGG + chr5_3:7366993-7367012 None:intergenic 30.0%
ATGATGATTAATCCATCATG+AGG + chr5_3:7366994-7367013 None:intergenic 30.0%
AATTGAAAGATTGAAGGATG+GGG + chr5_3:7367068-7367087 None:intergenic 30.0%
GAATTGAAAGATTGAAGGAT+GGG + chr5_3:7367069-7367088 None:intergenic 30.0%
TGAATTGAAAGATTGAAGGA+TGG + chr5_3:7367070-7367089 None:intergenic 30.0%
TCTTTCAATTCATTATGTGC+TGG - chr5_3:7367078-7367097 Msa0795420:three_prime_UTR 30.0%
!!! CATCTCTTTTAGTTGATAGA+AGG + chr5_3:7367111-7367130 None:intergenic 30.0%
TTCATCTTCTATTCTCTCTA+AGG + chr5_3:7367220-7367239 None:intergenic 30.0%
AACAACTTGAGTAGAAAAAG+GGG + chr5_3:7367248-7367267 None:intergenic 30.0%
CAACAACTTGAGTAGAAAAA+GGG + chr5_3:7367249-7367268 None:intergenic 30.0%
ACAACAACTTGAGTAGAAAA+AGG + chr5_3:7367250-7367269 None:intergenic 30.0%
! TTTCTCAGCATAATTTTCGT+TGG - chr5_3:7367270-7367289 Msa0795420:intron 30.0%
!!! TTTTTTCCCTTTTCACTTTC+TGG - chr5_3:7367311-7367330 Msa0795420:intron 30.0%
! TTTTTCCCTTTTCACTTTCT+GGG - chr5_3:7367312-7367331 Msa0795420:intron 30.0%
!!! TTCTGTGATTTTGATTGTGT+AGG - chr5_3:7367446-7367465 Msa0795420:intron 30.0%
GTAGTAAAATGAGATTGAAG+AGG - chr5_3:7367664-7367683 Msa0795420:intron 30.0%
TTCAACAAACAGGACAATAA+GGG + chr5_3:7362917-7362936 None:intergenic 30.0%
ATTCAACAAACAGGACAATA+AGG + chr5_3:7362918-7362937 None:intergenic 30.0%
TAAGCAAGAATTCAACAAAC+AGG + chr5_3:7362927-7362946 None:intergenic 30.0%
! GTTTGTTGAATTCTTGCTTA+TGG - chr5_3:7362927-7362946 Msa0795420:three_prime_UTR 30.0%
AACAAATTTCATATTCAGCC+AGG + chr5_3:7363324-7363343 None:intergenic 30.0%
! TGTGTGATATTTTCTGACTA+TGG - chr5_3:7363459-7363478 Msa0795420:three_prime_UTR 30.0%
AATGAAATAAAGACCTACCA+GGG + chr5_3:7363512-7363531 None:intergenic 30.0%
AAATGAAATAAAGACCTACC+AGG + chr5_3:7363513-7363532 None:intergenic 30.0%
! GTTAATTTTGTGAAATTGGG+TGG - chr5_3:7363613-7363632 Msa0795420:intron 30.0%
CTCTGTTCATACAAATTTGA+AGG + chr5_3:7363720-7363739 None:intergenic 30.0%
GCTTATATTCATGTGATTTC+TGG - chr5_3:7363778-7363797 Msa0795420:intron 30.0%
! TATATTCATGTGATTTCTGG+AGG - chr5_3:7363781-7363800 Msa0795420:intron 30.0%
GAATTGATACTTGGTTGTAA+TGG - chr5_3:7363954-7363973 Msa0795420:intron 30.0%
!! TTGGTTGTAATGGATTAGTA+TGG - chr5_3:7363964-7363983 Msa0795420:intron 30.0%
!! TGGTTGTAATGGATTAGTAT+GGG - chr5_3:7363965-7363984 Msa0795420:intron 30.0%
CACACAAAAGTAAGTAAGAT+TGG + chr5_3:7364067-7364086 None:intergenic 30.0%
TTTACAAATGCTTCTACTGT+TGG - chr5_3:7364342-7364361 Msa0795420:three_prime_UTR 30.0%
ACTGTTAGAATGAGTAAACA+TGG - chr5_3:7364372-7364391 Msa0795420:three_prime_UTR 30.0%
!!! ATGGTTTTGAAAGATAGACA+TGG - chr5_3:7364391-7364410 Msa0795420:three_prime_UTR 30.0%
TAATATCTTTACGCCTGTTA+TGG + chr5_3:7364516-7364535 None:intergenic 30.0%
CCCAACAAATATATAAGAGT+AGG + chr5_3:7364568-7364587 None:intergenic 30.0%
! TTATATATTTGTTGGGTTGC+AGG - chr5_3:7364572-7364591 Msa0795420:intron 30.0%
! GAATCCATCTTTGTAGTTTT+TGG - chr5_3:7364594-7364613 Msa0795420:intron 30.0%
! ACAATATTAGTTGCTTTGAC+AGG - chr5_3:7364693-7364712 Msa0795420:three_prime_UTR 30.0%
AAAAAGTGAAATACCTGAAG+CGG + chr5_3:7364726-7364745 None:intergenic 30.0%
CAACATCAGAACAACAAAAA+AGG + chr5_3:7364756-7364775 None:intergenic 30.0%
!!! TTTTTTAGAATTTGAGGCAG+TGG - chr5_3:7364830-7364849 Msa0795420:three_prime_UTR 30.0%
AAATCTTGTGCAAAATGAGA+AGG - chr5_3:7364864-7364883 Msa0795420:three_prime_UTR 30.0%
AGAATTAAAATGAAGGCTGT+TGG - chr5_3:7370211-7370230 Msa0795420:intron 30.0%
! GGTGATTTGGAAATTGATTA+AGG - chr5_3:7370360-7370379 Msa0795420:intron 30.0%
TATTCAACTCATAGAACACT+CGG - chr5_3:7370602-7370621 Msa0795420:intron 30.0%
CTATAAACTACTAACGTACA+AGG - chr5_3:7370817-7370836 Msa0795420:intron 30.0%
CATAACATAGCATTCAAAAG+AGG + chr5_3:7371005-7371024 None:intergenic 30.0%
AAATTTCTGCTACTGAATAC+AGG - chr5_3:7371053-7371072 Msa0795420:intron 30.0%
CTAGTTAAAGAAGGTTTGAT+CGG + chr5_3:7371364-7371383 None:intergenic 30.0%
TAGTGATAGCTAGTTAAAGA+AGG + chr5_3:7371373-7371392 None:intergenic 30.0%
TCTTTAACTAGCTATCACTA+TGG - chr5_3:7371373-7371392 Msa0795420:intron 30.0%
TGTGAAGCTTCAATTTATAC+AGG - chr5_3:7371500-7371519 Msa0795420:intron 30.0%
!!! AAGAAGTTTTAGACTTTAGG+AGG + chr5_3:7371536-7371555 None:intergenic 30.0%
AATTCCATTCCAAAACTTAC+AGG - chr5_3:7371723-7371742 Msa0795420:intron 30.0%
! AAATTAGCTCCTGTAAGTTT+TGG + chr5_3:7371735-7371754 None:intergenic 30.0%
AGTGATCTGAAGAGAAAAAA+AGG + chr5_3:7371841-7371860 None:intergenic 30.0%
TAGAGCTGAAAAAAGAGAAT+GGG + chr5_3:7371985-7372004 None:intergenic 30.0%
ATAGAGCTGAAAAAAGAGAA+TGG + chr5_3:7371986-7372005 None:intergenic 30.0%
!! AGCTCTATTTCTATCTGAAA+AGG - chr5_3:7371998-7372017 Msa0795420:intron 30.0%
ATGAAGCCAGGAAAATTAAA+AGG + chr5_3:7372026-7372045 None:intergenic 30.0%
ATACACATTATAATGAAGCC+AGG + chr5_3:7372038-7372057 None:intergenic 30.0%
GGCTTCATTATAATGTGTAT+TGG - chr5_3:7372038-7372057 Msa0795420:intron 30.0%
TATGTCCATCTATCTCAAAA+TGG + chr5_3:7372260-7372279 None:intergenic 30.0%
CTTCATACTAAGAAAGAAGA+AGG - chr5_3:7372411-7372430 Msa0795420:intron 30.0%
TAATTGAAACATAGTGTGGT+TGG + chr5_3:7372739-7372758 None:intergenic 30.0%
ACTTATTAGGAAGGATAAAG+AGG + chr5_3:7372812-7372831 None:intergenic 30.0%
ATCTCATTCAGCCAAAAATA+TGG + chr5_3:7372878-7372897 None:intergenic 30.0%
! ATTTTTCCATCAAACAATGG+TGG + chr5_3:7373734-7373753 None:intergenic 30.0%
! TGGAGAAATTTGTTTCCCTA+TGG - chr5_3:7363201-7363220 Msa0795420:three_prime_UTR 35.0%
AGAAGCTAAACTAATTGAGC+AGG + chr5_3:7363252-7363271 None:intergenic 35.0%
GATTTCTTAGTAGAGACTAG+AGG - chr5_3:7363356-7363375 Msa0795420:three_prime_UTR 35.0%
TAGCATTCATTAGCTGTTAC+AGG - chr5_3:7363740-7363759 Msa0795420:intron 35.0%
TTCATTAGCTGTTACAGGTA+TGG - chr5_3:7363745-7363764 Msa0795420:intron 35.0%
!! TGTAATGGATTAGTATGGGT+TGG - chr5_3:7363969-7363988 Msa0795420:intron 35.0%
!! GTAATGGATTAGTATGGGTT+GGG - chr5_3:7363970-7363989 Msa0795420:intron 35.0%
!! TAATGGATTAGTATGGGTTG+GGG - chr5_3:7363971-7363990 Msa0795420:intron 35.0%
GGTTTCATCTAGCTAACATT+GGG + chr5_3:7364316-7364335 None:intergenic 35.0%
AGGTTTCATCTAGCTAACAT+TGG + chr5_3:7364317-7364336 None:intergenic 35.0%
CCTTCACTGATGATAAAGTA+TGG + chr5_3:7364622-7364641 None:intergenic 35.0%
CCATACTTTATCATCAGTGA+AGG - chr5_3:7364619-7364638 Msa0795420:intron 35.0%
TTATCATCAGTGAAGGTTCA+AGG - chr5_3:7364626-7364645 Msa0795420:intron 35.0%
! CTCATTTTGCACAAGATTTG+AGG + chr5_3:7364863-7364882 None:intergenic 35.0%
TATGTCTCTTTGGTTGAATG+TGG + chr5_3:7365018-7365037 None:intergenic 35.0%
TAGTGGAAACATTGTCCTAT+TGG + chr5_3:7365044-7365063 None:intergenic 35.0%
!! AAAGGGTGTGTCATTTCATT+TGG + chr5_3:7365146-7365165 None:intergenic 35.0%
! TGCATAATGGAAGTGTGTTT+GGG + chr5_3:7365184-7365203 None:intergenic 35.0%
TTGACTACCAATGAAGCAAA+AGG + chr5_3:7365289-7365308 None:intergenic 35.0%
! GCCAAAGTATCTGAAATTAG+TGG + chr5_3:7365336-7365355 None:intergenic 35.0%
AAGCTTCCATCCTAACTTTA+CGG - chr5_3:7365462-7365481 Msa0795420:three_prime_UTR 35.0%
AAAGCTTATGCCGTAAAGTT+AGG + chr5_3:7365475-7365494 None:intergenic 35.0%
! AAGCTCGCACATTTTAAATG+TGG - chr5_3:7365776-7365795 Msa0795420:intron 35.0%
GGACATTGCATAATATATGC+AGG + chr5_3:7365835-7365854 None:intergenic 35.0%
AGACTGATTGTAATTAGGGA+CGG + chr5_3:7365892-7365911 None:intergenic 35.0%
! CCTTTTAGCAAGTGTCTTAA+AGG + chr5_3:7365980-7365999 None:intergenic 35.0%
!! CCTTTAAGACACTTGCTAAA+AGG - chr5_3:7365977-7365996 Msa0795420:intron 35.0%
! TTTTCCGCACTCTTAAGAAA+CGG + chr5_3:7366306-7366325 None:intergenic 35.0%
CGCATAAATACAAGGTAATC+AGG - chr5_3:7366543-7366562 Msa0795420:intron 35.0%
GATCTTGCTTGATTGTTGAA+TGG + chr5_3:7366677-7366696 None:intergenic 35.0%
TGAATTACGAAAATACCCCT+AGG + chr5_3:7366805-7366824 None:intergenic 35.0%
! GTGAGGATTGTAGAATTTTG+GGG + chr5_3:7366929-7366948 None:intergenic 35.0%
! GGTGAGGATTGTAGAATTTT+GGG + chr5_3:7366930-7366949 None:intergenic 35.0%
! TGATGATTTTCATGGGGTTT+GGG + chr5_3:7366951-7366970 None:intergenic 35.0%
! ATGATGATTTTCATGGGGTT+TGG + chr5_3:7366952-7366971 None:intergenic 35.0%
!!! CATTTTTGAAACCCTCATGA+TGG - chr5_3:7366979-7366998 Msa0795420:intron 35.0%
!!! CTCTTTTAGTTGATAGAAGG+TGG + chr5_3:7367108-7367127 None:intergenic 35.0%
AAGTTGGAAGCTTGGTTAAT+GGG - chr5_3:7367172-7367191 Msa0795420:intron 35.0%
TTGATTGTGTAGGTATGAAG+AGG - chr5_3:7367456-7367475 Msa0795420:intron 35.0%
TGATTGTGTAGGTATGAAGA+GGG - chr5_3:7367457-7367476 Msa0795420:intron 35.0%
! TGGAGAAATTTGTTTCCCTA+TGG - chr5_3:7363201-7363220 Msa0795420:three_prime_UTR 35.0%
AGAAGCTAAACTAATTGAGC+AGG + chr5_3:7363252-7363271 None:intergenic 35.0%
GATTTCTTAGTAGAGACTAG+AGG - chr5_3:7363356-7363375 Msa0795420:three_prime_UTR 35.0%
TAGCATTCATTAGCTGTTAC+AGG - chr5_3:7363740-7363759 Msa0795420:intron 35.0%
TTCATTAGCTGTTACAGGTA+TGG - chr5_3:7363745-7363764 Msa0795420:intron 35.0%
!! TGTAATGGATTAGTATGGGT+TGG - chr5_3:7363969-7363988 Msa0795420:intron 35.0%
!! GTAATGGATTAGTATGGGTT+GGG - chr5_3:7363970-7363989 Msa0795420:intron 35.0%
!! TAATGGATTAGTATGGGTTG+GGG - chr5_3:7363971-7363990 Msa0795420:intron 35.0%
GGTTTCATCTAGCTAACATT+GGG + chr5_3:7364316-7364335 None:intergenic 35.0%
AGGTTTCATCTAGCTAACAT+TGG + chr5_3:7364317-7364336 None:intergenic 35.0%
CCTTCACTGATGATAAAGTA+TGG + chr5_3:7364622-7364641 None:intergenic 35.0%
CCATACTTTATCATCAGTGA+AGG - chr5_3:7364619-7364638 Msa0795420:intron 35.0%
TTATCATCAGTGAAGGTTCA+AGG - chr5_3:7364626-7364645 Msa0795420:intron 35.0%
! CTCATTTTGCACAAGATTTG+AGG + chr5_3:7364863-7364882 None:intergenic 35.0%
TTTACACAGTCAAGTGATTC+AGG - chr5_3:7370018-7370037 Msa0795420:intron 35.0%
CAATTGATCGATCTAAACCA+TGG + chr5_3:7370094-7370113 None:intergenic 35.0%
AAAAACTATCTACCTTGAGG+TGG + chr5_3:7370258-7370277 None:intergenic 35.0%
CAGAAAAACTATCTACCTTG+AGG + chr5_3:7370261-7370280 None:intergenic 35.0%
CAGAGACATATAGTTCATTG+CGG + chr5_3:7370322-7370341 None:intergenic 35.0%
TCCAACAACACCAACTATAT+AGG + chr5_3:7370537-7370556 None:intergenic 35.0%
!! ATATAGTTGGTGTTGTTGGA+TGG - chr5_3:7370537-7370556 Msa0795420:intron 35.0%
!! TATAGTTGGTGTTGTTGGAT+GGG - chr5_3:7370538-7370557 Msa0795420:intron 35.0%
ATTCAACTCATAGAACACTC+GGG - chr5_3:7370603-7370622 Msa0795420:intron 35.0%
CATGTAATGTCATACCTGAA+GGG + chr5_3:7370651-7370670 None:intergenic 35.0%
ACATGTAATGTCATACCTGA+AGG + chr5_3:7370652-7370671 None:intergenic 35.0%
!!! ACGTACAAGGTTTTGAATTG+TGG - chr5_3:7370830-7370849 Msa0795420:intron 35.0%
! GGTTTTTGCTCTGTTATTAC+TGG - chr5_3:7371074-7371093 Msa0795420:intron 35.0%
ATTACTGGAACCTTTACCAT+TGG - chr5_3:7371089-7371108 Msa0795420:intron 35.0%
TTACTGGAACCTTTACCATT+GGG - chr5_3:7371090-7371109 Msa0795420:intron 35.0%
AGCATCGTCAACATCTTTAA+AGG - chr5_3:7371139-7371158 Msa0795420:intron 35.0%
GCATCGTCAACATCTTTAAA+GGG - chr5_3:7371140-7371159 Msa0795420:intron 35.0%
! CAACATCTTTAAAGGGTTTG+AGG - chr5_3:7371147-7371166 Msa0795420:intron 35.0%
!! TACTTTTGGAAGCTTACACA+TGG - chr5_3:7371254-7371273 Msa0795420:intron 35.0%
ACATGGATCATTGTGATCAA+GGG - chr5_3:7371271-7371290 Msa0795420:intron 35.0%
AAATCAGAGAACAAGTTGCA+AGG - chr5_3:7371298-7371317 Msa0795420:intron 35.0%
AACAAGTTGCAAGGAATGAA+TGG - chr5_3:7371307-7371326 Msa0795420:intron 35.0%
CAAGGAATGAATGGAACAAA+TGG - chr5_3:7371316-7371335 Msa0795420:intron 35.0%
ATGAATGGAACAAATGGTGA+TGG - chr5_3:7371322-7371341 Msa0795420:intron 35.0%
! GTTTGAAGTGTTATCAGACA+TGG + chr5_3:7371465-7371484 None:intergenic 35.0%
! GTTGACTTTCTCTCCATTAA+CGG - chr5_3:7371897-7371916 Msa0795420:intron 35.0%
TTGACTTTCTCTCCATTAAC+GGG - chr5_3:7371898-7371917 Msa0795420:intron 35.0%
CTGTAGTAATGTGAACATGA+TGG + chr5_3:7371945-7371964 None:intergenic 35.0%
!!! AAGGCACCTTTTAATTTTCC+TGG - chr5_3:7372017-7372036 Msa0795420:intron 35.0%
TAATGTGTATTGGAATCGCT+TGG - chr5_3:7372048-7372067 Msa0795420:intron 35.0%
AATGTGTATTGGAATCGCTT+GGG - chr5_3:7372049-7372068 Msa0795420:intron 35.0%
!!! TCCTTCCATTTTGAGATAGA+TGG - chr5_3:7372252-7372271 Msa0795420:intron 35.0%
TCCATCTATCTCAAAATGGA+AGG + chr5_3:7372256-7372275 None:intergenic 35.0%
CTTTAATTGTGCTTCTGATG+AGG - chr5_3:7372333-7372352 Msa0795420:intron 35.0%
GAAGAAGGAACACGATAATA+TGG - chr5_3:7372426-7372445 Msa0795420:intron 35.0%
TATTCCTTCTATGATATGCC+TGG - chr5_3:7372497-7372516 Msa0795420:intron 35.0%
TCTTGAAAGATCCTCGTTAA+TGG + chr5_3:7372555-7372574 None:intergenic 35.0%
! TTCAAGTGCAGCCATATTTT+TGG - chr5_3:7372864-7372883 Msa0795420:intron 35.0%
!! AGCAGTATTTTTGATCTAGC+AGG - chr5_3:7373165-7373184 Msa0795420:intron 35.0%
TGTACGATGGTGTTTAAACT+TGG + chr5_3:7373221-7373240 None:intergenic 35.0%
! ATATGCAAGAAAGTGTACGA+TGG + chr5_3:7373234-7373253 None:intergenic 35.0%
AGAACAAGCACAAATGTTAG+AGG - chr5_3:7373331-7373350 Msa0795420:intron 35.0%
GAACAAGCACAAATGTTAGA+GGG - chr5_3:7373332-7373351 Msa0795420:intron 35.0%
ACAAATGTTAGAGGGACAAT+GGG - chr5_3:7373340-7373359 Msa0795420:intron 35.0%
AAAGTGGATATCTACAGCTT+TGG - chr5_3:7373419-7373438 Msa0795420:intron 35.0%
GTTCTATATTGGGCAAAAGA+GGG - chr5_3:7373542-7373561 Msa0795420:CDS 35.0%
TTCTATATTGGGCAAAAGAG+GGG - chr5_3:7373543-7373562 Msa0795420:CDS 35.0%
CATTAACGACTTCAACATCA+TGG + chr5_3:7373589-7373608 None:intergenic 35.0%
TAGGTTTGAGAGAATGACTA+TGG - chr5_3:7373616-7373635 Msa0795420:CDS 35.0%
TTTGAGAGAATGACTATGGT+TGG - chr5_3:7373620-7373639 Msa0795420:CDS 35.0%
ATGGCCTAATAGTTGGATTA+GGG + chr5_3:7373661-7373680 None:intergenic 35.0%
TATTAGGCCATCTATTGCAA+AGG - chr5_3:7373670-7373689 Msa0795420:intron 35.0%
CTGATAGGAGAAAGAGAAAA+AGG + chr5_3:7373851-7373870 None:intergenic 35.0%
AACAGAGCAAACATACTTTG+TGG - chr5_3:7373898-7373917 Msa0795420:CDS 35.0%
GACAACCTCTCACATATTTA+AGG + chr5_3:7373925-7373944 None:intergenic 35.0%
CCAATGGCAAAAGCTTCATA+GGG + chr5_3:7363112-7363131 None:intergenic 40.0%
ACCAATGGCAAAAGCTTCAT+AGG + chr5_3:7363113-7363132 None:intergenic 40.0%
! TATGAAGCTTTTGCCATTGG+TGG - chr5_3:7363112-7363131 Msa0795420:three_prime_UTR 40.0%
TCTGACTATGGAACTGATCT+TGG - chr5_3:7363471-7363490 Msa0795420:three_prime_UTR 40.0%
TATGGAACTGATCTTGGATC+AGG - chr5_3:7363477-7363496 Msa0795420:three_prime_UTR 40.0%
! TTTTGTGAAATTGGGTGGGT+AGG - chr5_3:7363618-7363637 Msa0795420:intron 40.0%
GTGGGTAGGAATTAAGCTAA+AGG - chr5_3:7363632-7363651 Msa0795420:intron 40.0%
!! GTCGTCTTTGGCTTTAACAT+TGG + chr5_3:7363998-7364017 None:intergenic 40.0%
TGTTAAAGCCAAAGACGACA+TGG - chr5_3:7363999-7364018 Msa0795420:intron 40.0%
ATCTACTACCATGTCGTCTT+TGG + chr5_3:7364010-7364029 None:intergenic 40.0%
AATTCTTGCAATTCCTGTCC+AGG - chr5_3:7364103-7364122 Msa0795420:intron 40.0%
! TCCAGGTAAAATGAAGCACT+GGG - chr5_3:7364120-7364139 Msa0795420:intron 40.0%
!! TAAAATGAAGCACTGGGAGA+TGG - chr5_3:7364126-7364145 Msa0795420:intron 40.0%
ACCAAACACAGTGAGATAGA+GGG + chr5_3:7364478-7364497 None:intergenic 40.0%
AACCAAACACAGTGAGATAG+AGG + chr5_3:7364479-7364498 None:intergenic 40.0%
GGTGCCAAAAACTACAAAGA+TGG + chr5_3:7364601-7364620 None:intergenic 40.0%
! TTTAGAATTTGAGGCAGTGG+AGG - chr5_3:7364833-7364852 Msa0795420:three_prime_UTR 40.0%
! TTAGAATTTGAGGCAGTGGA+GGG - chr5_3:7364834-7364853 Msa0795420:three_prime_UTR 40.0%
TCAAACTCTAAATGTGAGCG+TGG - chr5_3:7364966-7364985 Msa0795420:intron 40.0%
! CTATTGGAGGTATGTCTCTT+TGG + chr5_3:7365028-7365047 None:intergenic 40.0%
CAAAGAGACATACCTCCAAT+AGG - chr5_3:7365026-7365045 Msa0795420:intron 40.0%
TGGAAACATTGTCCTATTGG+AGG + chr5_3:7365041-7365060 None:intergenic 40.0%
! GTGCATAATGGAAGTGTGTT+TGG + chr5_3:7365185-7365204 None:intergenic 40.0%
AGGTTCAAATACACGCACAT+GGG + chr5_3:7365269-7365288 None:intergenic 40.0%
AAGGTTCAAATACACGCACA+TGG + chr5_3:7365270-7365289 None:intergenic 40.0%
! CATTGGTAGTCAATTCCAAG+TGG - chr5_3:7365296-7365315 Msa0795420:three_prime_UTR 40.0%
! ATGGAAGTTTGGTTGATGCT+TGG + chr5_3:7365401-7365420 None:intergenic 40.0%
CTTATGCCGTAAAGTTAGGA+TGG + chr5_3:7365471-7365490 None:intergenic 40.0%
CATAATATATGCAGGAGTCG+TGG + chr5_3:7365827-7365846 None:intergenic 40.0%
TATCCCGTTTCTTAAGAGTG+CGG - chr5_3:7366299-7366318 Msa0795420:three_prime_UTR 40.0%
TTTCCGCACTCTTAAGAAAC+GGG + chr5_3:7366305-7366324 None:intergenic 40.0%
AGCAAGATCGTCATGTCATA+TGG - chr5_3:7366688-7366707 Msa0795420:intron 40.0%
! TTTACCATTTTGCCCTTCCT+AGG - chr5_3:7366785-7366804 Msa0795420:intron 40.0%
! TTACCATTTTGCCCTTCCTA+GGG - chr5_3:7366786-7366805 Msa0795420:intron 40.0%
TACGAAAATACCCCTAGGAA+GGG + chr5_3:7366800-7366819 None:intergenic 40.0%
TTACGAAAATACCCCTAGGA+AGG + chr5_3:7366801-7366820 None:intergenic 40.0%
! GGGTGAGGATTGTAGAATTT+TGG + chr5_3:7366931-7366950 None:intergenic 40.0%
AAGATTGAAGGATGGGGTTA+GGG + chr5_3:7367062-7367081 None:intergenic 40.0%
AAAGATTGAAGGATGGGGTT+AGG + chr5_3:7367063-7367082 None:intergenic 40.0%
CACATGTATGGCTTGATTCA+TGG - chr5_3:7367149-7367168 Msa0795420:three_prime_UTR 40.0%
ATGGCTTGATTCATGGAAGT+TGG - chr5_3:7367156-7367175 Msa0795420:three_prime_UTR 40.0%
ATTCATGGAAGTTGGAAGCT+TGG - chr5_3:7367164-7367183 Msa0795420:intron 40.0%
GAAGTTGGAAGCTTGGTTAA+TGG - chr5_3:7367171-7367190 Msa0795420:intron 40.0%
AGTTGGAAGCTTGGTTAATG+GGG - chr5_3:7367173-7367192 Msa0795420:intron 40.0%
AGCTTGGTTAATGGGGTTTA+TGG - chr5_3:7367180-7367199 Msa0795420:intron 40.0%
GCTTGGTTAATGGGGTTTAT+GGG - chr5_3:7367181-7367200 Msa0795420:intron 40.0%
GTTAATGGGGTTTATGGGTT+CGG - chr5_3:7367186-7367205 Msa0795420:intron 40.0%
GATGACCCAGAAAGTGAAAA+GGG + chr5_3:7367320-7367339 None:intergenic 40.0%
AGATGACCCAGAAAGTGAAA+AGG + chr5_3:7367321-7367340 None:intergenic 40.0%
TGAGATTGAAGAGGGTTGTT+AGG - chr5_3:7367673-7367692 Msa0795420:intron 40.0%
GAGATTGAAGAGGGTTGTTA+GGG - chr5_3:7367674-7367693 Msa0795420:intron 40.0%
CCAATGGCAAAAGCTTCATA+GGG + chr5_3:7363112-7363131 None:intergenic 40.0%
ACCAATGGCAAAAGCTTCAT+AGG + chr5_3:7363113-7363132 None:intergenic 40.0%
! TATGAAGCTTTTGCCATTGG+TGG - chr5_3:7363112-7363131 Msa0795420:three_prime_UTR 40.0%
TCTGACTATGGAACTGATCT+TGG - chr5_3:7363471-7363490 Msa0795420:three_prime_UTR 40.0%
TATGGAACTGATCTTGGATC+AGG - chr5_3:7363477-7363496 Msa0795420:three_prime_UTR 40.0%
! TTTTGTGAAATTGGGTGGGT+AGG - chr5_3:7363618-7363637 Msa0795420:intron 40.0%
GTGGGTAGGAATTAAGCTAA+AGG - chr5_3:7363632-7363651 Msa0795420:intron 40.0%
!! GTCGTCTTTGGCTTTAACAT+TGG + chr5_3:7363998-7364017 None:intergenic 40.0%
TGTTAAAGCCAAAGACGACA+TGG - chr5_3:7363999-7364018 Msa0795420:intron 40.0%
ATCTACTACCATGTCGTCTT+TGG + chr5_3:7364010-7364029 None:intergenic 40.0%
AATTCTTGCAATTCCTGTCC+AGG - chr5_3:7364103-7364122 Msa0795420:intron 40.0%
! TCCAGGTAAAATGAAGCACT+GGG - chr5_3:7364120-7364139 Msa0795420:intron 40.0%
!! TAAAATGAAGCACTGGGAGA+TGG - chr5_3:7364126-7364145 Msa0795420:intron 40.0%
ACCAAACACAGTGAGATAGA+GGG + chr5_3:7364478-7364497 None:intergenic 40.0%
AACCAAACACAGTGAGATAG+AGG + chr5_3:7364479-7364498 None:intergenic 40.0%
GGTGCCAAAAACTACAAAGA+TGG + chr5_3:7364601-7364620 None:intergenic 40.0%
! TTTAGAATTTGAGGCAGTGG+AGG - chr5_3:7364833-7364852 Msa0795420:three_prime_UTR 40.0%
! TTAGAATTTGAGGCAGTGGA+GGG - chr5_3:7364834-7364853 Msa0795420:three_prime_UTR 40.0%
TCAAACTCTAAATGTGAGCG+TGG - chr5_3:7364966-7364985 Msa0795420:intron 40.0%
TCAAACTTGAAATGTGGCCA+TGG - chr5_3:7370074-7370093 Msa0795420:intron 40.0%
CGCAATGAACTATATGTCTC+TGG - chr5_3:7370320-7370339 Msa0795420:intron 40.0%
ATTGTTGAATGCAGTGAGCT+TGG - chr5_3:7370409-7370428 Msa0795420:intron 40.0%
TTGTTGAATGCAGTGAGCTT+GGG - chr5_3:7370410-7370429 Msa0795420:intron 40.0%
! TGTGATTGCAAGGTACTTGA+AGG - chr5_3:7370454-7370473 Msa0795420:intron 40.0%
CATGAAGGTAAAACCAAGCA+GGG + chr5_3:7370496-7370515 None:intergenic 40.0%
ACATGAAGGTAAAACCAAGC+AGG + chr5_3:7370497-7370516 None:intergenic 40.0%
CTGATTGGCATGTAACATGA+AGG + chr5_3:7370511-7370530 None:intergenic 40.0%
CAACTATATAGGCAGCTGAT+TGG + chr5_3:7370526-7370545 None:intergenic 40.0%
CAATCAGCTGCCTATATAGT+TGG - chr5_3:7370524-7370543 Msa0795420:intron 40.0%
!! GCCTATATAGTTGGTGTTGT+TGG - chr5_3:7370533-7370552 Msa0795420:intron 40.0%
!! ATAGTTGGTGTTGTTGGATG+GGG - chr5_3:7370539-7370558 Msa0795420:intron 40.0%
!!! AAGGTTTTGAATTGTGGCTG+TGG - chr5_3:7370836-7370855 Msa0795420:intron 40.0%
AAAAGTTCGACACTGCAATC+TGG + chr5_3:7370962-7370981 None:intergenic 40.0%
TACTGGAACCTTTACCATTG+GGG - chr5_3:7371091-7371110 Msa0795420:intron 40.0%
AAAGATGTTGACGATGCTGA+TGG + chr5_3:7371137-7371156 None:intergenic 40.0%
CACATGGATCATTGTGATCA+AGG - chr5_3:7371270-7371289 Msa0795420:intron 40.0%
CATGGATCATTGTGATCAAG+GGG - chr5_3:7371272-7371291 Msa0795420:intron 40.0%
!! GGAACAAATGGTGATGGATA+TGG - chr5_3:7371328-7371347 Msa0795420:intron 40.0%
!! AAGAGTACCTTTGATGATGG+TGG + chr5_3:7371399-7371418 None:intergenic 40.0%
!! CTGAAGAGTACCTTTGATGA+TGG + chr5_3:7371402-7371421 None:intergenic 40.0%
!!! AGCTCCTGTAAGTTTTGGAA+TGG + chr5_3:7371730-7371749 None:intergenic 40.0%
CATGTACTTGCAGCTATTGA+TGG + chr5_3:7371865-7371884 None:intergenic 40.0%
AATGGAGAGAAAGTCAACAG+TGG + chr5_3:7371895-7371914 None:intergenic 40.0%
TCAGAGTATGATGCTTAGAG+TGG - chr5_3:7372228-7372247 Msa0795420:intron 40.0%
GAAGGAACACGATAATATGG+TGG - chr5_3:7372429-7372448 Msa0795420:intron 40.0%
AATGCCAGGCATATCATAGA+AGG + chr5_3:7372504-7372523 None:intergenic 40.0%
TCTGTCTTTCATTAGCAGCT+TGG + chr5_3:7373308-7373327 None:intergenic 40.0%
CACAAATGTTAGAGGGACAA+TGG - chr5_3:7373339-7373358 Msa0795420:intron 40.0%
TAGAGGGACAATGGGATATT+TGG - chr5_3:7373348-7373367 Msa0795420:intron 40.0%
!! CAATCCACTTTTGCAGTGAT+AGG + chr5_3:7373397-7373416 None:intergenic 40.0%
!! GCAAAAGTGGATTGCAAAAG+TGG - chr5_3:7373403-7373422 Msa0795420:intron 40.0%
!! GAGTTGCATCAAGTTGAAGA+TGG - chr5_3:7373482-7373501 Msa0795420:intron 40.0%
! CAAGTTGAAGATGGAACAGA+AGG - chr5_3:7373491-7373510 Msa0795420:intron 40.0%
GGTTCTATATTGGGCAAAAG+AGG - chr5_3:7373541-7373560 Msa0795420:CDS 40.0%
TGTGCCCTAATCCAACTATT+AGG - chr5_3:7373654-7373673 Msa0795420:intron 40.0%
GATGGCCTAATAGTTGGATT+AGG + chr5_3:7373662-7373681 None:intergenic 40.0%
GCAATAGATGGCCTAATAGT+TGG + chr5_3:7373668-7373687 None:intergenic 40.0%
TGCAACACCTTTGCAATAGA+TGG + chr5_3:7373680-7373699 None:intergenic 40.0%
AGTGTTCCACCATTGTTTGA+TGG - chr5_3:7373725-7373744 Msa0795420:intron 40.0%
GTGGTCCTTAAATATGTGAG+AGG - chr5_3:7373917-7373936 Msa0795420:CDS 40.0%
! CCCTATGAAGCTTTTGCCAT+TGG - chr5_3:7363109-7363128 Msa0795420:three_prime_UTR 45.0%
AGTGTGAGAGGCTATGAAGA+AGG - chr5_3:7363142-7363161 Msa0795420:three_prime_UTR 45.0%
!! CGATCGTATGTTGTTGGTTC+TGG - chr5_3:7363181-7363200 Msa0795420:three_prime_UTR 45.0%
! GATACTCACTTGATTCGACC+TGG - chr5_3:7363303-7363322 Msa0795420:three_prime_UTR 45.0%
! GTGCTTCATTTTACCTGGAC+AGG + chr5_3:7364119-7364138 None:intergenic 45.0%
GTCCAGGTAAAATGAAGCAC+TGG - chr5_3:7364119-7364138 Msa0795420:intron 45.0%
! TCCCAGTGCTTCATTTTACC+TGG + chr5_3:7364124-7364143 None:intergenic 45.0%
TCCCTCTATCTCACTGTGTT+TGG - chr5_3:7364474-7364493 Msa0795420:three_prime_UTR 45.0%
! TAGAATTTGAGGCAGTGGAG+GGG - chr5_3:7364835-7364854 Msa0795420:three_prime_UTR 45.0%
ACTCTAAATGTGAGCGTGGT+TGG - chr5_3:7364970-7364989 Msa0795420:intron 45.0%
! GATAGTAGAGTAGTGCCACT+TGG + chr5_3:7365314-7365333 None:intergenic 45.0%
!! GTGTTCAGGTGATGGAAGTT+TGG + chr5_3:7365412-7365431 None:intergenic 45.0%
TGTTACTGGTGTTCAGGTGA+TGG + chr5_3:7365420-7365439 None:intergenic 45.0%
AGGAGTCGTGGTTTAAACTC+TGG + chr5_3:7365815-7365834 None:intergenic 45.0%
GTCCTTACAAGCTAAGCTCA+CGG - chr5_3:7365851-7365870 Msa0795420:intron 45.0%
TCCTTACAAGCTAAGCTCAC+GGG - chr5_3:7365852-7365871 Msa0795420:intron 45.0%
TCATTGAACCCTCTCATGAG+TGG - chr5_3:7366451-7366470 Msa0795420:intron 45.0%
TACGAGTACCACTCATGAGA+GGG + chr5_3:7366462-7366481 None:intergenic 45.0%
GCAAATTCTGTATAGGGGTC+AGG - chr5_3:7366650-7366669 Msa0795420:intron 45.0%
! TACCATTTTGCCCTTCCTAG+GGG - chr5_3:7366787-7366806 Msa0795420:intron 45.0%
AGAGAGAAATGGGAGGAAGA+AGG + chr5_3:7366888-7366907 None:intergenic 45.0%
TCTTCCTCCCATTTCTCTCT+CGG - chr5_3:7366888-7366907 Msa0795420:three_prime_UTR 45.0%
!!! TTTTGGGGTTGAGAGTGAGA+GGG + chr5_3:7366914-7366933 None:intergenic 45.0%
!!! ATTTTGGGGTTGAGAGTGAG+AGG + chr5_3:7366915-7366934 None:intergenic 45.0%
! ATTTTCATGGGGTTTGGGTG+AGG + chr5_3:7366946-7366965 None:intergenic 45.0%
AGTTTGGACAGAACAGGAAG+AGG + chr5_3:7367036-7367055 None:intergenic 45.0%
GAGGGTTAGAGAAACTGTTG+AGG - chr5_3:7367475-7367494 Msa0795420:intron 45.0%
! CCCTATGAAGCTTTTGCCAT+TGG - chr5_3:7363109-7363128 Msa0795420:three_prime_UTR 45.0%
AGTGTGAGAGGCTATGAAGA+AGG - chr5_3:7363142-7363161 Msa0795420:three_prime_UTR 45.0%
!! CGATCGTATGTTGTTGGTTC+TGG - chr5_3:7363181-7363200 Msa0795420:three_prime_UTR 45.0%
! GATACTCACTTGATTCGACC+TGG - chr5_3:7363303-7363322 Msa0795420:three_prime_UTR 45.0%
! GTGCTTCATTTTACCTGGAC+AGG + chr5_3:7364119-7364138 None:intergenic 45.0%
GTCCAGGTAAAATGAAGCAC+TGG - chr5_3:7364119-7364138 Msa0795420:intron 45.0%
! TCCCAGTGCTTCATTTTACC+TGG + chr5_3:7364124-7364143 None:intergenic 45.0%
TCCCTCTATCTCACTGTGTT+TGG - chr5_3:7364474-7364493 Msa0795420:three_prime_UTR 45.0%
! TAGAATTTGAGGCAGTGGAG+GGG - chr5_3:7364835-7364854 Msa0795420:three_prime_UTR 45.0%
ACTCTAAATGTGAGCGTGGT+TGG - chr5_3:7364970-7364989 Msa0795420:intron 45.0%
ATGAAGGCTGTTGGAATCTG+TGG - chr5_3:7370220-7370239 Msa0795420:intron 45.0%
TGAAGGCTGTTGGAATCTGT+GGG - chr5_3:7370221-7370240 Msa0795420:intron 45.0%
TGTTGAATGCAGTGAGCTTG+GGG - chr5_3:7370411-7370430 Msa0795420:intron 45.0%
TTGGGGATCTTGATGCCTTT+AGG - chr5_3:7370428-7370447 Msa0795420:intron 45.0%
CTTGCAATCACAGCTCCTAA+AGG + chr5_3:7370446-7370465 None:intergenic 45.0%
! CTTTAGGAGCTGTGATTGCA+AGG - chr5_3:7370444-7370463 Msa0795420:intron 45.0%
AACCTTTACCATTGGGGTGT+CGG - chr5_3:7371097-7371116 Msa0795420:intron 45.0%
! CTTTAAAGGGTTTGAGGCCT+TGG - chr5_3:7371153-7371172 Msa0795420:intron 45.0%
! AACTGGAAGCATGCATACAC+CGG - chr5_3:7371202-7371221 Msa0795420:intron 45.0%
ACCGGCATTATTGCAGCATT+GGG - chr5_3:7371220-7371239 Msa0795420:intron 45.0%
ACCCAATGCTGCAATAATGC+CGG + chr5_3:7371224-7371243 None:intergenic 45.0%
ACTATGGCCACCATCATCAA+AGG - chr5_3:7371389-7371408 Msa0795420:intron 45.0%
TAACACTTCAAACATGCCCG+TGG - chr5_3:7371472-7371491 Msa0795420:intron 45.0%
ACTTTCCACTCACCCGTTAA+TGG + chr5_3:7371913-7371932 None:intergenic 45.0%
GTGCTTCTGATGAGGAAGAA+AGG - chr5_3:7372341-7372360 Msa0795420:intron 45.0%
AGATCCTCGTTAATGGCAAC+AGG + chr5_3:7372548-7372567 None:intergenic 45.0%
! GATAAAGAGGTGTGACAGCA+AGG + chr5_3:7372799-7372818 None:intergenic 45.0%
TCACTGTCGAGAAAGATGCT+CGG + chr5_3:7372966-7372985 None:intergenic 45.0%
TGGGATATTTGGCACCAGAA+TGG - chr5_3:7373359-7373378 Msa0795420:intron 45.0%
!! GGTGCATTTTTGAGCCATTC+TGG + chr5_3:7373376-7373395 None:intergenic 45.0%
TGCACCTATCACTGCAAAAG+TGG - chr5_3:7373390-7373409 Msa0795420:intron 45.0%
GTTGAAGATGGAACAGAAGG+TGG - chr5_3:7373494-7373513 Msa0795420:intron 45.0%
GAATGACTATGGTTGGACTG+TGG - chr5_3:7373627-7373646 Msa0795420:CDS 45.0%
!! TGCAAAGGTGTTGCAGATGT+CGG - chr5_3:7373685-7373704 Msa0795420:intron 45.0%
TGGTAAACTGCCAGTCTCTC+TGG - chr5_3:7363061-7363080 Msa0795420:three_prime_UTR 50.0%
TAAACTGCCAGTCTCTCTGG+TGG - chr5_3:7363064-7363083 Msa0795420:three_prime_UTR 50.0%
CACACTGTTCGTTCCACCAA+TGG + chr5_3:7363128-7363147 None:intergenic 50.0%
GTGAGAGGCTATGAAGAAGG+CGG - chr5_3:7363145-7363164 Msa0795420:three_prime_UTR 50.0%
TCTGGGCGATCGTATGTTGT+TGG - chr5_3:7363175-7363194 Msa0795420:three_prime_UTR 50.0%
GACAGGTTTCTTTCCGCTTC+AGG - chr5_3:7364710-7364729 Msa0795420:three_prime_UTR 50.0%
AAATACACGCACATGGGCAG+CGG + chr5_3:7365263-7365282 None:intergenic 50.0%
GTCGTTGTGCCTGAGTACTT+GGG + chr5_3:7365532-7365551 None:intergenic 50.0%
CTGAATGTTGCTCAGGGACA+AGG + chr5_3:7365554-7365573 None:intergenic 50.0%
TGTCCCTGAGCAACATTCAG+TGG - chr5_3:7365554-7365573 Msa0795420:three_prime_UTR 50.0%
GTCCCTGAGCAACATTCAGT+GGG - chr5_3:7365555-7365574 Msa0795420:three_prime_UTR 50.0%
TCCCTGAGCAACATTCAGTG+GGG - chr5_3:7365556-7365575 Msa0795420:three_prime_UTR 50.0%
ACCCCACTGAATGTTGCTCA+GGG + chr5_3:7365560-7365579 None:intergenic 50.0%
!! TCCCGTGAGCTTAGCTTGTA+AGG + chr5_3:7365856-7365875 None:intergenic 50.0%
CTACGAGTACCACTCATGAG+AGG + chr5_3:7366463-7366482 None:intergenic 50.0%
TACCCCTAGGAAGGGCAAAA+TGG + chr5_3:7366792-7366811 None:intergenic 50.0%
CAGAACAGGAAGAGGAGAAG+AGG + chr5_3:7367028-7367047 None:intergenic 50.0%
GGGTTCAGTTTGGACAGAAC+AGG + chr5_3:7367042-7367061 None:intergenic 50.0%
GATGGGGTTAGGGTTCAGTT+TGG + chr5_3:7367052-7367071 None:intergenic 50.0%
AATGGGGTTTATGGGTTCGG+TGG - chr5_3:7367189-7367208 Msa0795420:intron 50.0%
TGGTAAACTGCCAGTCTCTC+TGG - chr5_3:7363061-7363080 Msa0795420:three_prime_UTR 50.0%
TAAACTGCCAGTCTCTCTGG+TGG - chr5_3:7363064-7363083 Msa0795420:three_prime_UTR 50.0%
CACACTGTTCGTTCCACCAA+TGG + chr5_3:7363128-7363147 None:intergenic 50.0%
GTGAGAGGCTATGAAGAAGG+CGG - chr5_3:7363145-7363164 Msa0795420:three_prime_UTR 50.0%
TCTGGGCGATCGTATGTTGT+TGG - chr5_3:7363175-7363194 Msa0795420:three_prime_UTR 50.0%
GACAGGTTTCTTTCCGCTTC+AGG - chr5_3:7364710-7364729 Msa0795420:three_prime_UTR 50.0%
GAGTGATGTTCACCACCTCA+AGG - chr5_3:7370243-7370262 Msa0795420:intron 50.0%
TCAAAACAGCAGACCCTGCT+TGG - chr5_3:7370480-7370499 Msa0795420:intron 50.0%
AAGCTGGGAAGTGACTTAGC+TGG - chr5_3:7370572-7370591 Msa0795420:intron 50.0%
GTCATACCTGAAGGGTTCCA+AGG + chr5_3:7370643-7370662 None:intergenic 50.0%
ATCCGACACCCCAATGGTAA+AGG + chr5_3:7371102-7371121 None:intergenic 50.0%
! TAAAGGGTTTGAGGCCTTGG+AGG - chr5_3:7371156-7371175 Msa0795420:intron 50.0%
CACCGGCATTATTGCAGCAT+TGG - chr5_3:7371219-7371238 Msa0795420:intron 50.0%
! GGCATTATTGCAGCATTGGG+TGG - chr5_3:7371223-7371242 Msa0795420:intron 50.0%
! GGGTGGCATTGCTGTACTTT+TGG - chr5_3:7371240-7371259 Msa0795420:intron 50.0%
CTTCAGACTCTCCTATCAGC+TGG - chr5_3:7371416-7371435 Msa0795420:intron 50.0%
TCTCAACCTCACCAGCTGAT+AGG + chr5_3:7371430-7371449 None:intergenic 50.0%
TGAAGCTTCACAAGCAGCCA+CGG + chr5_3:7371492-7371511 None:intergenic 50.0%
! TCTCTCCATTAACGGGTGAG+TGG - chr5_3:7371905-7371924 Msa0795420:intron 50.0%
! GGCATTTGGCTCATAATGCC+AGG + chr5_3:7372518-7372537 None:intergenic 50.0%
TTAATGGCAACAGGCAGTGG+CGG + chr5_3:7372539-7372558 None:intergenic 50.0%
TCGTTAATGGCAACAGGCAG+TGG + chr5_3:7372542-7372561 None:intergenic 50.0%
ACTGCCTGTTGCCATTAACG+AGG - chr5_3:7372541-7372560 Msa0795420:intron 50.0%
!! AAGGTGTTGCAGATGTCGGA+AGG - chr5_3:7373689-7373708 Msa0795420:intron 50.0%
CACATGACCACCAGAGAGAC+TGG + chr5_3:7363074-7363093 None:intergenic 55.0%
CAGTCTCTCTGGTGGTCATG+TGG - chr5_3:7363072-7363091 Msa0795420:three_prime_UTR 55.0%
CTCTCTGGTGGTCATGTGGT+AGG - chr5_3:7363076-7363095 Msa0795420:three_prime_UTR 55.0%
GGTGGAACGAACAGTGTGAG+AGG - chr5_3:7363130-7363149 Msa0795420:three_prime_UTR 55.0%
AGGCTATGAAGAAGGCGGTG+TGG - chr5_3:7363150-7363169 Msa0795420:three_prime_UTR 55.0%
GGCTATGAAGAAGGCGGTGT+GGG - chr5_3:7363151-7363170 Msa0795420:three_prime_UTR 55.0%
CCTGAGTACTTGGGTGGTCT+TGG + chr5_3:7365523-7365542 None:intergenic 55.0%
CCAAGACCACCCAAGTACTC+AGG - chr5_3:7365520-7365539 Msa0795420:three_prime_UTR 55.0%
GTTGTGCCTGAGTACTTGGG+TGG + chr5_3:7365529-7365548 None:intergenic 55.0%
GGTCGTTGTGCCTGAGTACT+TGG + chr5_3:7365533-7365552 None:intergenic 55.0%
CACCCCACTGAATGTTGCTC+AGG + chr5_3:7365561-7365580 None:intergenic 55.0%
ATGTGCGAGCTTCAGCCACT+AGG + chr5_3:7365768-7365787 None:intergenic 55.0%
GAGAGGGCCGAGAGAGAAAT+GGG + chr5_3:7366898-7366917 None:intergenic 55.0%
TGAGAGGGCCGAGAGAGAAA+TGG + chr5_3:7366899-7366918 None:intergenic 55.0%
CACATGACCACCAGAGAGAC+TGG + chr5_3:7363074-7363093 None:intergenic 55.0%
CAGTCTCTCTGGTGGTCATG+TGG - chr5_3:7363072-7363091 Msa0795420:three_prime_UTR 55.0%
CTCTCTGGTGGTCATGTGGT+AGG - chr5_3:7363076-7363095 Msa0795420:three_prime_UTR 55.0%
GGTGGAACGAACAGTGTGAG+AGG - chr5_3:7363130-7363149 Msa0795420:three_prime_UTR 55.0%
AGGCTATGAAGAAGGCGGTG+TGG - chr5_3:7363150-7363169 Msa0795420:three_prime_UTR 55.0%
GGCTATGAAGAAGGCGGTGT+GGG - chr5_3:7363151-7363170 Msa0795420:three_prime_UTR 55.0%
! ATGGGGTACCAGTGTCAAGC+TGG - chr5_3:7370556-7370575 Msa0795420:intron 55.0%
! TGGGGTACCAGTGTCAAGCT+GGG - chr5_3:7370557-7370576 Msa0795420:intron 55.0%
GTCACTTCCCAGCTTGACAC+TGG + chr5_3:7370567-7370586 None:intergenic 55.0%
GGGATCATCCTCTTCTGCCT+TGG - chr5_3:7370623-7370642 Msa0795420:intron 55.0%
GAAGGGTTCCAAGGCAGAAG+AGG + chr5_3:7370634-7370653 None:intergenic 55.0%
CTTCTGCCTTGGAACCCTTC+AGG - chr5_3:7370634-7370653 Msa0795420:intron 55.0%
TTGCGTATCCGACACCCCAA+TGG + chr5_3:7371108-7371127 None:intergenic 55.0%
CAGCGGATCGCTACGATAAC+TGG - chr5_3:7371185-7371204 Msa0795420:intron 55.0%
GACTCTCCTATCAGCTGGTG+AGG - chr5_3:7371421-7371440 Msa0795420:intron 55.0%
GAAGCTTCACAAGCAGCCAC+GGG + chr5_3:7371491-7371510 None:intergenic 55.0%
! CGAGAAAGATGCTCGGTGAG+TGG + chr5_3:7372959-7372978 None:intergenic 55.0%
AAGAAGGCGGTGTGGGCTCT+GGG - chr5_3:7363158-7363177 Msa0795420:three_prime_UTR 60.0%
ACATGGGCAGCGGAATCAGG+CGG + chr5_3:7365253-7365272 None:intergenic 60.0%
AGGGCCGAGAGAGAAATGGG+AGG + chr5_3:7366895-7366914 None:intergenic 60.0%
AAGAAGGCGGTGTGGGCTCT+GGG - chr5_3:7363158-7363177 Msa0795420:three_prime_UTR 60.0%
ATCCGCTGCAGACACCTCCA+AGG + chr5_3:7371173-7371192 None:intergenic 60.0%
CAACAGGCAGTGGCGGCATT+TGG + chr5_3:7372532-7372551 None:intergenic 60.0%
! GATGCTCGGTGAGTGGTGAC+AGG + chr5_3:7372952-7372971 None:intergenic 60.0%
GAAGAAGGCGGTGTGGGCTC+TGG - chr5_3:7363157-7363176 Msa0795420:three_prime_UTR 65.0%
GGATCAGGCTCGACTGTCCC+TGG - chr5_3:7363492-7363511 Msa0795420:three_prime_UTR 65.0%
CAGGCTCGACTGTCCCTGGT+AGG - chr5_3:7363496-7363515 Msa0795420:three_prime_UTR 65.0%
CATGGGCAGCGGAATCAGGC+GGG + chr5_3:7365252-7365271 None:intergenic 65.0%
CGCACATGGGCAGCGGAATC+AGG + chr5_3:7365256-7365275 None:intergenic 65.0%
GAAGAAGGCGGTGTGGGCTC+TGG - chr5_3:7363157-7363176 Msa0795420:three_prime_UTR 65.0%
GGATCAGGCTCGACTGTCCC+TGG - chr5_3:7363492-7363511 Msa0795420:three_prime_UTR 65.0%
CAGGCTCGACTGTCCCTGGT+AGG - chr5_3:7363496-7363515 Msa0795420:three_prime_UTR 65.0%
!! GGCCTTGGAGGTGTCTGCAG+CGG - chr5_3:7371168-7371187 Msa0795420:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 7362795 7373946 7362795 ID=Msa0795420;Name=Msa0795420
chr5_3 mRNA 7362795 7373946 7362795 ID=Msa0795420-mRNA-1;Parent=Msa0795420;Name=Msa0795420-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.87|0.88|1|0.43|0.52|17|2630|136
chr5_3 exon 7362795 7363554 7362795 ID=Msa0795420-mRNA-1:exon:3027;Parent=Msa0795420-mRNA-1
chr5_3 exon 7364143 7364527 7364143 ID=Msa0795420-mRNA-1:exon:3026;Parent=Msa0795420-mRNA-1
chr5_3 exon 7364671 7364741 7364671 ID=Msa0795420-mRNA-1:exon:3025;Parent=Msa0795420-mRNA-1
chr5_3 exon 7364822 7364886 7364822 ID=Msa0795420-mRNA-1:exon:3024;Parent=Msa0795420-mRNA-1
chr5_3 exon 7365220 7365666 7365220 ID=Msa0795420-mRNA-1:exon:3023;Parent=Msa0795420-mRNA-1
chr5_3 exon 7366086 7366318 7366086 ID=Msa0795420-mRNA-1:exon:3022;Parent=Msa0795420-mRNA-1
chr5_3 exon 7366477 7366544 7366477 ID=Msa0795420-mRNA-1:exon:3021;Parent=Msa0795420-mRNA-1
chr5_3 exon 7366798 7366953 7366798 ID=Msa0795420-mRNA-1:exon:3020;Parent=Msa0795420-mRNA-1
chr5_3 exon 7367045 7367182 7367045 ID=Msa0795420-mRNA-1:exon:3019;Parent=Msa0795420-mRNA-1
chr5_3 exon 7367583 7367651 7367583 ID=Msa0795420-mRNA-1:exon:3018;Parent=Msa0795420-mRNA-1
chr5_3 exon 7368263 7368332 7368263 ID=Msa0795420-mRNA-1:exon:3017;Parent=Msa0795420-mRNA-1
chr5_3 exon 7368554 7368701 7368554 ID=Msa0795420-mRNA-1:exon:3016;Parent=Msa0795420-mRNA-1
chr5_3 exon 7369046 7369131 7369046 ID=Msa0795420-mRNA-1:exon:3015;Parent=Msa0795420-mRNA-1
chr5_3 exon 7369233 7369273 7369233 ID=Msa0795420-mRNA-1:exon:3014;Parent=Msa0795420-mRNA-1
chr5_3 exon 7373228 7373297 7373228 ID=Msa0795420-mRNA-1:exon:3013;Parent=Msa0795420-mRNA-1
chr5_3 exon 7373519 7373666 7373519 ID=Msa0795420-mRNA-1:exon:3012;Parent=Msa0795420-mRNA-1
chr5_3 exon 7373861 7373946 7373861 ID=Msa0795420-mRNA-1:exon:3011;Parent=Msa0795420-mRNA-1
chr5_3 CDS 7373861 7373946 7373861 ID=Msa0795420-mRNA-1:cds;Parent=Msa0795420-mRNA-1
chr5_3 CDS 7373519 7373666 7373519 ID=Msa0795420-mRNA-1:cds;Parent=Msa0795420-mRNA-1
chr5_3 CDS 7373228 7373297 7373228 ID=Msa0795420-mRNA-1:cds;Parent=Msa0795420-mRNA-1
chr5_3 CDS 7369233 7369273 7369233 ID=Msa0795420-mRNA-1:cds;Parent=Msa0795420-mRNA-1
chr5_3 CDS 7369066 7369131 7369066 ID=Msa0795420-mRNA-1:cds;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7369046 7369065 7369046 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7368554 7368701 7368554 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7368263 7368332 7368263 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7367583 7367651 7367583 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7367045 7367182 7367045 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7366798 7366953 7366798 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7366477 7366544 7366477 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7366086 7366318 7366086 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7365220 7365666 7365220 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7364822 7364886 7364822 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7364671 7364741 7364671 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7364143 7364527 7364143 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
chr5_3 three_prime_UTR 7362795 7363554 7362795 ID=Msa0795420-mRNA-1:three_prime_utr;Parent=Msa0795420-mRNA-1
Gene Sequence

>Msa0795420

ATGATTCTTCATGTTATATCAGTATTATACATATTTGGTGAGTTAGAGAATTATGATACTATTCTCTATGAATTTCCATATTTGAGTCTCTCTGGTGGTCATGTGGTAGGAAATTTCTCTCCCTATGAAGCTTTTGCCATTGGTGGAACGAACAGTGTGAGAGGCTATGAAGAAGGCGGTGTGGGCTCTGGGCGATCGTATGTTGTTGGTTCTGGAGAAATTTGTTTCCCTATGATGAAGCCATTAGAATGTGTGATATTTTCTGACTATGGAACTGATCTTGGATCAGGCTCGACTGTCCCTGGTATGAAGAGGGTTAGAGAAACTGTTGAGGAGCTTCTTGATGTTTATGAAGCGAATCTGTCTAATTTTTCTGATATTCTGAATTGGGCTATTGCAGTAGTAAAATGA

Protein sequence

>Msa0795420

MILHVISVLYIFGELENYDTILYEFPYLSLSGGHVVGNFSPYEAFAIGGTNSVRGYEEGGVGSGRSYVVGSGEICFPMMKPLECVIFSDYGTDLGSGSTVPGMKRVRETVEELLDVYEANLSNFSDILNWAIAVVK*