Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799240 | XP_003612007.3 | 57.508 | 313 | 58 | 4 | 3 | 241 | 6 | 317 | 1.29e-109 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799240 | G7KDL4 | 57.508 | 313 | 58 | 4 | 3 | 241 | 6 | 317 | 6.17e-110 | 328 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0688500 | Msa0799240 | 0.860444 | 2.056407e-63 | -8.615850e-47 |
Msa0716800 | Msa0799240 | 0.903494 | 3.272049e-79 | -8.615850e-47 |
Msa0757870 | Msa0799240 | 0.881934 | 1.587601e-70 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799240 | MtrunA17_Chr5g0404141 | 56.522 | 299 | 56 | 3 | 16 | 240 | 18 | 316 | 5.52e-111 | 322 |
Msa0799240 | MtrunA17_Chr5g0404211 | 58.824 | 289 | 43 | 3 | 17 | 233 | 19 | 303 | 4.73e-109 | 316 |
Msa0799240 | MtrunA17_Chr8g0373201 | 48.630 | 292 | 73 | 3 | 16 | 230 | 18 | 309 | 1.68e-87 | 261 |
Msa0799240 | MtrunA17_Chr5g0404161 | 59.509 | 163 | 40 | 3 | 3 | 140 | 16 | 177 | 4.32e-56 | 179 |
Msa0799240 | MtrunA17_Chr5g0404171 | 81.188 | 101 | 19 | 0 | 141 | 241 | 1 | 101 | 1.15e-55 | 173 |
Msa0799240 | MtrunA17_Chr3g0123881 | 29.893 | 281 | 126 | 8 | 18 | 232 | 25 | 300 | 7.55e-27 | 105 |
Msa0799240 | MtrunA17_Chr5g0426241 | 25.914 | 301 | 136 | 5 | 3 | 226 | 8 | 298 | 4.94e-26 | 103 |
Msa0799240 | MtrunA17_Chr3g0136411 | 28.929 | 280 | 113 | 6 | 24 | 227 | 32 | 301 | 1.01e-25 | 102 |
Msa0799240 | MtrunA17_Chr2g0279171 | 27.322 | 183 | 94 | 4 | 15 | 174 | 24 | 190 | 2.47e-14 | 71.2 |
Msa0799240 | MtrunA17_Chr2g0279171 | 41.463 | 82 | 47 | 1 | 146 | 226 | 220 | 301 | 1.38e-12 | 66.2 |
Msa0799240 | MtrunA17_Chr8g0381981 | 35.000 | 100 | 61 | 2 | 145 | 240 | 73 | 172 | 5.89e-13 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799240 | AT2G18360.1 | 42.857 | 308 | 92 | 4 | 6 | 229 | 2 | 309 | 1.67e-78 | 239 |
Msa0799240 | AT4G36610.1 | 42.484 | 306 | 94 | 4 | 6 | 229 | 2 | 307 | 1.18e-73 | 227 |
Msa0799240 | AT2G18360.2 | 38.376 | 271 | 83 | 4 | 6 | 192 | 2 | 272 | 3.79e-55 | 178 |
Msa0799240 | AT5G21950.1 | 29.268 | 287 | 122 | 6 | 15 | 226 | 21 | 301 | 3.12e-30 | 114 |
Msa0799240 | AT5G21950.6 | 29.268 | 287 | 122 | 6 | 15 | 226 | 73 | 353 | 1.09e-29 | 114 |
Msa0799240 | AT4G33180.1 | 27.178 | 287 | 126 | 5 | 17 | 226 | 24 | 304 | 1.69e-27 | 107 |
Msa0799240 | AT4G39955.1 | 26.821 | 302 | 134 | 7 | 15 | 239 | 20 | 311 | 1.09e-25 | 102 |
Msa0799240 | AT5G21950.7 | 28.854 | 253 | 99 | 6 | 15 | 192 | 21 | 267 | 4.81e-23 | 94.7 |
Msa0799240 | AT1G78210.1 | 37.063 | 143 | 59 | 4 | 18 | 137 | 23 | 157 | 1.40e-20 | 89.0 |
Msa0799240 | AT5G21950.3 | 34.694 | 147 | 67 | 2 | 15 | 138 | 21 | 161 | 3.02e-19 | 83.6 |
Msa0799240 | AT5G21950.2 | 34.694 | 147 | 67 | 2 | 15 | 138 | 21 | 161 | 3.02e-19 | 83.6 |
Msa0799240 | AT5G21950.5 | 34.694 | 147 | 67 | 2 | 15 | 138 | 73 | 213 | 6.28e-19 | 83.6 |
Msa0799240 | AT5G21950.4 | 34.694 | 147 | 67 | 2 | 15 | 138 | 73 | 213 | 6.28e-19 | 83.6 |
Msa0799240 | AT4G33180.2 | 31.410 | 156 | 73 | 3 | 17 | 144 | 24 | 173 | 1.65e-16 | 76.3 |
Msa0799240 | AT1G72620.1 | 25.907 | 193 | 99 | 6 | 8 | 174 | 45 | 219 | 1.74e-13 | 69.3 |
Msa0799240 | AT1G17430.1 | 26.768 | 198 | 93 | 7 | 8 | 174 | 41 | 217 | 4.33e-12 | 65.1 |
Find 146 sgRNAs with CRISPR-Local
Find 834 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAATTACCTGCGAAAATTT+TGG | 0.091229 | 5_3:+12369520 | None:intergenic |
ATAATTACATGCGGTAATTT+TGG | 0.137348 | 5_3:+12360758 | None:intergenic |
GTTCAAGCTGTGGTTGTTAC+TGG | 0.212355 | 5_3:-12361312 | Msa0799240:CDS |
CAGGTACAGTTATCAGATTC+TGG | 0.215898 | 5_3:-12361665 | Msa0799240:CDS |
TGCTGGTCATTTGGCTCATT+TGG | 0.218297 | 5_3:-12360339 | Msa0799240:CDS |
CAGGTACAGTTATGAGATTT+TGG | 0.234420 | 5_3:-12373531 | Msa0799240:five_prime_UTR |
TGAACACGGTGAACGTAATT+TGG | 0.258916 | 5_3:-12373615 | Msa0799240:five_prime_UTR |
TTGTGGTTGGATTCAGTTAT+GGG | 0.264411 | 5_3:-12361377 | Msa0799240:CDS |
TTTGGCTATGACAGAATCTA+TGG | 0.309509 | 5_3:-12361283 | Msa0799240:intron |
GTGTTATGCAAATTTCAATA+AGG | 0.321018 | 5_3:-12360142 | Msa0799240:three_prime_UTR |
GGTTGTTACTGGTTCAGTTT+TGG | 0.327599 | 5_3:-12361301 | Msa0799240:CDS |
AGCGACCATGTGTTTATAAT+AGG | 0.329987 | 5_3:-12369147 | Msa0799240:five_prime_UTR |
ACATATTCATAGATGTGAAT+TGG | 0.340839 | 5_3:+12360244 | None:intergenic |
GGGAATGGTGGCGTTTAAAA+TGG | 0.353247 | 5_3:-12361355 | Msa0799240:CDS |
TCATCAAGCATAATATGAAT+TGG | 0.356245 | 5_3:+12369075 | None:intergenic |
TGGAAGAAAGAAACTTCTTT+AGG | 0.358269 | 5_3:+12360291 | None:intergenic |
GCATATTCATTGATATGAAC+TGG | 0.358339 | 5_3:+12369039 | None:intergenic |
AATAAAGAATGCTGGTCATT+TGG | 0.359126 | 5_3:-12360348 | Msa0799240:CDS |
CAAGCCGAGTGCTTGGCGGC+GGG | 0.361024 | 5_3:-12373289 | Msa0799240:five_prime_UTR |
CAATGACCGGTCCGTCTTAT+CGG | 0.366913 | 5_3:+12373318 | None:intergenic |
TGTAGGTGATGTTCTCAAAT+AGG | 0.370028 | 5_3:-12360838 | Msa0799240:intron |
GGTAGTAAGTGGTGCAGTTT+TGG | 0.371501 | 5_3:-12373161 | Msa0799240:five_prime_UTR |
TCACATCTATGAATATGTTA+AGG | 0.373587 | 5_3:-12360239 | Msa0799240:exon |
TCTCATCAAGGACTTTCTTA+AGG | 0.375056 | 5_3:-12372996 | Msa0799240:intron |
GACTTGGAAATGGTGTTAGA+AGG | 0.380475 | 5_3:+12373505 | None:intergenic |
TGCTGGATTCTCTTCTTGTT+CGG | 0.380760 | 5_3:-12373101 | Msa0799240:five_prime_UTR |
CCTTAAGCAATTTCTTGCTT+CGG | 0.386650 | 5_3:-12369122 | Msa0799240:five_prime_UTR |
CTCCACGGCTTCTGCGGTGA+TGG | 0.387211 | 5_3:-12373430 | Msa0799240:five_prime_UTR |
TGGAATGGTGGCGTTTAAAA+TGG | 0.401285 | 5_3:-12373215 | Msa0799240:five_prime_UTR |
GTCTAACATTACCTCCATCT+TGG | 0.401693 | 5_3:+12360095 | None:intergenic |
GTTGTGGTTGGATTCAGTTA+TGG | 0.403447 | 5_3:-12361378 | Msa0799240:CDS |
GATACATATTTACAGGAAGC+TGG | 0.411250 | 5_3:-12369224 | Msa0799240:intron |
AACGACCATGTATTTACAAT+AGG | 0.419462 | 5_3:-12360316 | Msa0799240:CDS |
TTAATGCCATCTTCTGTTGA+AGG | 0.421465 | 5_3:-12373073 | Msa0799240:five_prime_UTR |
TCAAGCCGAGTGCTTGGCGG+CGG | 0.421494 | 5_3:-12373290 | Msa0799240:five_prime_UTR |
CAAGTCGAGTGTTTGGTGGC+AGG | 0.425471 | 5_3:-12361429 | Msa0799240:CDS |
AGTGTTTGGTGGCAGGATTA+AGG | 0.427783 | 5_3:-12361422 | Msa0799240:CDS |
TTCAATAAGGCATGTTATGT+TGG | 0.429742 | 5_3:-12360129 | Msa0799240:three_prime_UTR |
TAATTTGGACACTGGTTAGT+TGG | 0.431991 | 5_3:-12373600 | Msa0799240:five_prime_UTR |
GAATATGTTAAGGGTGTGTT+TGG | 0.440354 | 5_3:-12360229 | Msa0799240:three_prime_UTR |
CACATCTATGAATATGTTAA+GGG | 0.440621 | 5_3:-12360238 | Msa0799240:exon |
AAAATGGCTGAGATGTATAG+TGG | 0.456525 | 5_3:-12373199 | Msa0799240:five_prime_UTR |
CGATAAGACGGACCGGTCAT+TGG | 0.462509 | 5_3:-12373317 | Msa0799240:five_prime_UTR |
CTATTAGAGGCTACAATCAA+TGG | 0.465518 | 5_3:-12360800 | Msa0799240:CDS |
TGCAGGTGATGTTCTCAAAT+CGG | 0.466616 | 5_3:-12369600 | Msa0799240:intron |
AGGTACAGTTATCAGATTCT+GGG | 0.474510 | 5_3:-12361664 | Msa0799240:CDS |
GGAGCGAGGTGAGCTATTAG+AGG | 0.480515 | 5_3:-12360813 | Msa0799240:CDS |
TGGATTCAGTTATGGTGGAA+TGG | 0.487428 | 5_3:-12373230 | Msa0799240:five_prime_UTR |
AGGCATGTTATGTTGGACTA+AGG | 0.487689 | 5_3:-12360122 | Msa0799240:three_prime_UTR |
GCAGCGAATACATCTTCTGT+GGG | 0.489370 | 5_3:-12369379 | Msa0799240:intron |
TTCACTCCTTCAACAGAAGA+TGG | 0.491079 | 5_3:+12373067 | None:intergenic |
TTCATATTTAGAGCAACCTC+TGG | 0.491397 | 5_3:+12360516 | None:intergenic |
GTGAAGACACTTCTTTCTGT+TGG | 0.492067 | 5_3:-12373049 | Msa0799240:five_prime_UTR |
CCGAAGCAAGAAATTGCTTA+AGG | 0.494759 | 5_3:+12369122 | None:intergenic |
GAGAGTGCAATTGAGCACTA+AGG | 0.494760 | 5_3:-12360175 | Msa0799240:three_prime_UTR |
GTGGTTGGATTCAGTTATGG+GGG | 0.495525 | 5_3:-12361375 | Msa0799240:CDS |
AGTAAGGCAGTTGAAGATGC+TGG | 0.497607 | 5_3:-12373118 | Msa0799240:five_prime_UTR |
TGCACAATGGAGATAGAGCC+AGG | 0.497760 | 5_3:-12361684 | Msa0799240:CDS |
AGTTGGGTAGTGAAGATGGC+AGG | 0.500162 | 5_3:-12373583 | Msa0799240:five_prime_UTR |
GGTTAGTTGGGTAGTGAAGA+TGG | 0.500320 | 5_3:-12373587 | Msa0799240:five_prime_UTR |
TGTGGTTGGATTCAGTTATG+GGG | 0.501446 | 5_3:-12361376 | Msa0799240:CDS |
GAGAACCACCACTGGCTTGA+GGG | 0.502073 | 5_3:+12361593 | None:intergenic |
GTGGAGAAATGTGTTGTGGT+TGG | 0.502378 | 5_3:-12373250 | Msa0799240:five_prime_UTR |
AAGTCCTTGATGAGACGGTT+GGG | 0.503284 | 5_3:+12373004 | None:intergenic |
AAAGGAGTCTATGATTAGTA+AGG | 0.505701 | 5_3:-12373134 | Msa0799240:five_prime_UTR |
GATACATATGACAGGAGGCT+AGG | 0.506453 | 5_3:-12360392 | Msa0799240:intron |
GTTGTGGTTGGATTCAGTTA+TGG | 0.507297 | 5_3:-12373238 | Msa0799240:five_prime_UTR |
CAAAATCTCATAACTGTACC+TGG | 0.509625 | 5_3:+12373532 | None:intergenic |
GAGAACCACTACTGGCTTCG+TGG | 0.511337 | 5_3:+12373453 | None:intergenic |
TTGATGAGACGGTTGGGAAA+CGG | 0.512140 | 5_3:+12373010 | None:intergenic |
AATTTGGACACTGGTTAGTT+GGG | 0.512586 | 5_3:-12373599 | Msa0799240:five_prime_UTR |
GATAAAGAAGGCTGGCCACT+TGG | 0.513619 | 5_3:-12369179 | Msa0799240:five_prime_UTR |
TGATAAGCCGGATCGATCAC+TGG | 0.516525 | 5_3:-12361457 | Msa0799240:CDS |
GTCCATCACCGCAGAAGCCG+TGG | 0.517790 | 5_3:+12361568 | None:intergenic |
ATACATATTTACAGGAAGCT+GGG | 0.518388 | 5_3:-12369223 | Msa0799240:intron |
AAAATACGCTGTTTATGTAC+CGG | 0.520843 | 5_3:-12373368 | Msa0799240:five_prime_UTR |
TGCTTTGAAGTGGTTTCAGA+TGG | 0.523339 | 5_3:+12361639 | None:intergenic |
GTCCATCACCGCAGAAGCCG+TGG | 0.529252 | 5_3:+12373428 | None:intergenic |
GTCTTTGTAGCTAATGACTA+AGG | 0.531626 | 5_3:+12369552 | None:intergenic |
TGCAGCGAATACATCTTCTG+TGG | 0.532773 | 5_3:-12369380 | Msa0799240:intron |
GTTTCCCAACCGTCTCATCA+AGG | 0.533356 | 5_3:-12373008 | Msa0799240:five_prime_UTR |
AAAGTCCTTGATGAGACGGT+TGG | 0.534634 | 5_3:+12373003 | None:intergenic |
GTGGTTGGATTCAGTTATGG+TGG | 0.535201 | 5_3:-12373235 | Msa0799240:five_prime_UTR |
AGGCACCTATTGTAAATACA+TGG | 0.537294 | 5_3:+12360311 | None:intergenic |
AGAACCACTACTGGCTTCGT+GGG | 0.537427 | 5_3:+12373454 | None:intergenic |
TGGACTAAGGTTGTCCAAGA+TGG | 0.537995 | 5_3:-12360109 | Msa0799240:three_prime_UTR |
CAGAATCTGATAACTGTACC+TGG | 0.539522 | 5_3:+12361666 | None:intergenic |
CGGCGGGGTTAAAGAAACTC+GGG | 0.543702 | 5_3:-12373273 | Msa0799240:five_prime_UTR |
CTCGGGTTTGTGCTTTGAAG+TGG | 0.543986 | 5_3:+12361629 | None:intergenic |
TAACCCCGCCGCCAAGCACT+CGG | 0.545546 | 5_3:+12373285 | None:intergenic |
GCGGTGATGGACTAGCTACT+TGG | 0.547477 | 5_3:-12373417 | Msa0799240:five_prime_UTR |
GTGGAGAAATGTGTTGTGGT+TGG | 0.549522 | 5_3:-12361390 | Msa0799240:CDS |
TTTGAAGTAATAAAGAATGC+TGG | 0.549992 | 5_3:-12360356 | Msa0799240:CDS |
CGGCTCAATCACTGATAAGC+CGG | 0.550483 | 5_3:-12361469 | Msa0799240:CDS |
TTGTGAGTTGGTTCAAGCTG+TGG | 0.551335 | 5_3:-12361322 | Msa0799240:CDS |
ATACATATGACAGGAGGCTA+GGG | 0.552341 | 5_3:-12360391 | Msa0799240:intron |
CCGTGGAGGAGAACCACTAC+TGG | 0.555092 | 5_3:+12373445 | None:intergenic |
GTTCTCCTCCACGGCTTCTG+CGG | 0.555958 | 5_3:-12361576 | Msa0799240:intron |
GTTCTCCTCCACGGCTTCTG+CGG | 0.558623 | 5_3:-12373436 | Msa0799240:five_prime_UTR |
GGCTGAGATGTATTGTGAGT+TGG | 0.559991 | 5_3:-12361334 | Msa0799240:CDS |
AGAACCACCACTGGCTTGAG+GGG | 0.567571 | 5_3:+12361594 | None:intergenic |
CGGCTTGAAAAGCCAATGAC+CGG | 0.568948 | 5_3:+12373305 | None:intergenic |
GGAGAACCACCACTGGCTTG+AGG | 0.570985 | 5_3:+12361592 | None:intergenic |
TGAAAAGCCAGTGATCGATC+CGG | 0.574587 | 5_3:+12361450 | None:intergenic |
AACATTACAAGAGATAAAGA+AGG | 0.574716 | 5_3:-12369191 | Msa0799240:five_prime_UTR |
GTTCAAGCCGTGGTAGTAAG+TGG | 0.575800 | 5_3:-12373172 | Msa0799240:five_prime_UTR |
CCACCAAAGAAAATTAAGTC+CGG | 0.578036 | 5_3:+12373349 | None:intergenic |
AAGCCGAGTGCTTGGCGGCG+GGG | 0.579590 | 5_3:-12373288 | Msa0799240:five_prime_UTR |
TTACAAGAGATAAAGAAGGC+TGG | 0.588072 | 5_3:-12369187 | Msa0799240:five_prime_UTR |
TAAGAAAGTCCTTGATGAGA+CGG | 0.588220 | 5_3:+12372999 | None:intergenic |
GGTGAACGTAATTTGGACAC+TGG | 0.590468 | 5_3:-12373608 | Msa0799240:five_prime_UTR |
TAGTGGGTTGGTTCAAGCCG+TGG | 0.596910 | 5_3:-12373182 | Msa0799240:five_prime_UTR |
ATAATCAAACATGGTGAACA+CGG | 0.596997 | 5_3:-12373629 | Msa0799240:five_prime_UTR |
AGTTGGACAATGAAGATGGT+TGG | 0.598833 | 5_3:-12361717 | Msa0799240:intron |
AACTGCACCACTTACTACCA+CGG | 0.603216 | 5_3:+12373165 | None:intergenic |
GGCGGGGTTAAAGAAACTCG+GGG | 0.603623 | 5_3:-12373272 | Msa0799240:five_prime_UTR |
CAAACAAATATAATCAAACA+TGG | 0.604116 | 5_3:-12373638 | Msa0799240:five_prime_UTR |
CCGTGGAGGAGAACCACCAC+TGG | 0.606123 | 5_3:+12361585 | None:intergenic |
GGCTGAGATGTATAGTGGGT+TGG | 0.606775 | 5_3:-12373194 | Msa0799240:five_prime_UTR |
GGTGATGTTCTCAAATAGGA+AGG | 0.608018 | 5_3:-12360834 | Msa0799240:CDS |
GCGGCGGGGTTAAAGAAACT+CGG | 0.609750 | 5_3:-12373274 | Msa0799240:five_prime_UTR |
CTCAAAACCCCTCAAGCCAG+TGG | 0.615635 | 5_3:-12361601 | Msa0799240:CDS |
CAAACCCACGAAGCCAGTAG+TGG | 0.619279 | 5_3:-12373458 | Msa0799240:intron |
TGGCTCAACCACCGATAAGA+CGG | 0.620981 | 5_3:-12373329 | Msa0799240:five_prime_UTR |
TACACAGTAGAGATAGAACC+AGG | 0.622207 | 5_3:-12373550 | Msa0799240:five_prime_UTR |
CCAGTAGTGGTTCTCCTCCA+CGG | 0.624688 | 5_3:-12373445 | Msa0799240:five_prime_UTR |
GGTGATGTTCTCAAATCGGA+AGG | 0.625620 | 5_3:-12369596 | Msa0799240:five_prime_UTR |
CCAGTGGTGGTTCTCCTCCA+CGG | 0.625931 | 5_3:-12361585 | Msa0799240:CDS |
ACTAAGGTTGTCCAAGATGG+AGG | 0.632839 | 5_3:-12360106 | Msa0799240:three_prime_UTR |
TGACCGGTCCGTCTTATCGG+TGG | 0.636640 | 5_3:+12373321 | None:intergenic |
CATATCAATGAATATGCCAA+CGG | 0.636748 | 5_3:-12369033 | Msa0799240:intron |
TGGTGTGAAGCTTTGCACAA+TGG | 0.641774 | 5_3:-12361697 | Msa0799240:CDS |
AAATGGCTGAGATGTATAGT+GGG | 0.642705 | 5_3:-12373198 | Msa0799240:five_prime_UTR |
CATCACCGCAGAAGCCGTGG+AGG | 0.648231 | 5_3:+12361571 | None:intergenic |
CATCACCGCAGAAGCCGTGG+AGG | 0.648231 | 5_3:+12373431 | None:intergenic |
CAACCACCGATAAGACGGAC+CGG | 0.649108 | 5_3:-12373324 | Msa0799240:five_prime_UTR |
AAAACCCCTCAAGCCAGTGG+TGG | 0.654870 | 5_3:-12361598 | Msa0799240:CDS |
CGGGGTGGAGAAATGTGTTG+TGG | 0.661435 | 5_3:-12373254 | Msa0799240:five_prime_UTR |
ATTCAGTTATGGTGGAATGG+TGG | 0.669440 | 5_3:-12373227 | Msa0799240:five_prime_UTR |
CAATGTGGAGAAATGTGTTG+TGG | 0.684131 | 5_3:-12361394 | Msa0799240:CDS |
TTCTCAAATAGGAAGGAGCG+AGG | 0.685477 | 5_3:-12360827 | Msa0799240:CDS |
AGGCACCTATTATAAACACA+TGG | 0.694510 | 5_3:+12369142 | None:intergenic |
GTCGCTCAATATGAGCCAAG+TGG | 0.710691 | 5_3:+12369164 | None:intergenic |
CAGCGAATACATCTTCTGTG+GGG | 0.727762 | 5_3:-12369378 | Msa0799240:five_prime_UTR |
AGGATTAAGGAAACTCAATG+TGG | 0.765244 | 5_3:-12361409 | Msa0799240:CDS |
GGGGTTAAAGAAACTCGGGG+TGG | 0.785996 | 5_3:-12373269 | Msa0799240:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATAGCAATAAATATAAA+AGG | - | chr5_3:12361068-12361087 | Msa0799240:intron | 10.0% |
!! | ATTATTCATATTACTTAAAT+AGG | - | chr5_3:12361588-12361607 | Msa0799240:CDS | 10.0% |
!! | GTTATACTAAAAAAATTTAA+GGG | + | chr5_3:12362812-12362831 | None:intergenic | 10.0% |
!! | TGTTATACTAAAAAAATTTA+AGG | + | chr5_3:12362813-12362832 | None:intergenic | 10.0% |
!! | ATTATTTGTGTATTTAATAT+TGG | - | chr5_3:12362916-12362935 | Msa0799240:intron | 10.0% |
!! | TTATTTGTGTATTTAATATT+GGG | - | chr5_3:12362917-12362936 | Msa0799240:intron | 10.0% |
!!! | TAATTTATGTAAATTTTACA+TGG | - | chr5_3:12363319-12363338 | Msa0799240:intron | 10.0% |
!!! | AATTAATTTTTTTTTTTGTC+AGG | + | chr5_3:12363688-12363707 | None:intergenic | 10.0% |
!!! | CACTTTATTATTATTTTTTA+TGG | - | chr5_3:12364298-12364317 | Msa0799240:intron | 10.0% |
!! | AAAATAAAAAAGAACTTAAT+TGG | + | chr5_3:12364900-12364919 | None:intergenic | 10.0% |
!! | TATATATATAAGAACTTAAT+TGG | + | chr5_3:12364930-12364949 | None:intergenic | 10.0% |
!!! | AAAAAATAATTGATTTGTTA+AGG | - | chr5_3:12365197-12365216 | Msa0799240:intron | 10.0% |
!!! | AAAAATAATTGATTTGTTAA+GGG | - | chr5_3:12365198-12365217 | Msa0799240:intron | 10.0% |
!!! | TTTTTTTTATCAGATTTTTT+TGG | + | chr5_3:12365234-12365253 | None:intergenic | 10.0% |
!!! | ATGTTAGTTAATTTTTTTTA+AGG | - | chr5_3:12365262-12365281 | Msa0799240:intron | 10.0% |
!!! | TATGTATATAGTTTTTTTTT+TGG | - | chr5_3:12366422-12366441 | Msa0799240:intron | 10.0% |
!! | CATATTAAGTTAAAAAAATA+TGG | - | chr5_3:12367251-12367270 | Msa0799240:intron | 10.0% |
!!! | AAAAACACTATTTTTTTTTA+CGG | - | chr5_3:12370585-12370604 | Msa0799240:intron | 10.0% |
!! | AATTATTCAAATCATTATTA+TGG | - | chr5_3:12370976-12370995 | Msa0799240:intron | 10.0% |
!! | NNNNNNNNNTTGTAAATACA+TGG | + | chr5_3:12371122-12371141 | None:intergenic | 10.0% |
!! | ATATTTAATAAGTTATTGTA+GGG | - | chr5_3:12371332-12371351 | Msa0799240:intron | 10.0% |
!! | TAAAAGGTAAAAATATTGTA+TGG | - | chr5_3:12361084-12361103 | Msa0799240:intron | 15.0% |
!! | AAAAGGTAAAAATATTGTAT+GGG | - | chr5_3:12361085-12361104 | Msa0799240:intron | 15.0% |
!!! | ACTTTTTTCTTAAATAAAGA+AGG | + | chr5_3:12361695-12361714 | None:intergenic | 15.0% |
!!! | AATTGAAATTTTGTTAATGT+CGG | - | chr5_3:12362023-12362042 | Msa0799240:intron | 15.0% |
!! | ATCTATGAAATATTTGAAAA+TGG | - | chr5_3:12362557-12362576 | Msa0799240:intron | 15.0% |
!!! | AATTTTAATGTTTCACAAAA+TGG | + | chr5_3:12363428-12363447 | None:intergenic | 15.0% |
!!! | AATAAAATTAAAACGTGTTT+TGG | + | chr5_3:12364342-12364361 | None:intergenic | 15.0% |
!! | AGTAGTATATTTATAATATC+TGG | - | chr5_3:12364853-12364872 | Msa0799240:intron | 15.0% |
!! | TTAAAGTTATGTTTATACAT+TGG | - | chr5_3:12365307-12365326 | Msa0799240:intron | 15.0% |
!! | TAAACATTTATGATGTATAT+TGG | + | chr5_3:12366312-12366331 | None:intergenic | 15.0% |
!! | TATACATCATAAATGTTTAA+AGG | - | chr5_3:12366313-12366332 | Msa0799240:intron | 15.0% |
!! | TAGTTATTGTTGAAATAAAA+AGG | + | chr5_3:12367509-12367528 | None:intergenic | 15.0% |
!! | AAAAAAGAAGATAAAGAAAT+TGG | - | chr5_3:12368122-12368141 | Msa0799240:intron | 15.0% |
!! | AAAAAGAAGATAAAGAAATT+GGG | - | chr5_3:12368123-12368142 | Msa0799240:intron | 15.0% |
!!! | AAAGTGTGATTTTATTTTAT+AGG | - | chr5_3:12369107-12369126 | Msa0799240:five_prime_UTR | 15.0% |
!! | CAACATTCTAAATATTTATA+TGG | - | chr5_3:12369139-12369158 | Msa0799240:five_prime_UTR | 15.0% |
!! | TCCTTAAAAAAATAAGTAAT+GGG | + | chr5_3:12369983-12370002 | None:intergenic | 15.0% |
!! | TTCCTTAAAAAAATAAGTAA+TGG | + | chr5_3:12369984-12370003 | None:intergenic | 15.0% |
!! | TCTAAAAATAAGAAAGTAAT+GGG | + | chr5_3:12370009-12370028 | None:intergenic | 15.0% |
!!! | TTCTAAAAATAAGAAAGTAA+TGG | + | chr5_3:12370010-12370029 | None:intergenic | 15.0% |
!!! | AAAAATATTAATACCCATTT+TGG | - | chr5_3:12370271-12370290 | Msa0799240:intron | 15.0% |
!! | AACTAACATAATAAAAACAT+AGG | + | chr5_3:12370796-12370815 | None:intergenic | 15.0% |
!! | CTTTCAAAAAAAAAAAAAGA+TGG | + | chr5_3:12370853-12370872 | None:intergenic | 15.0% |
!! | CATATTTAATAAGTTATTGT+AGG | - | chr5_3:12371331-12371350 | Msa0799240:intron | 15.0% |
!! | TGTTTATTTATATTACTGTT+TGG | + | chr5_3:12371410-12371429 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAACCATG+AGG | - | chr5_3:12371596-12371615 | Msa0799240:intron | 15.0% |
!! | TCATCATATATTAAGATATA+TGG | - | chr5_3:12371762-12371781 | Msa0799240:intron | 15.0% |
!!! | ATTTTCCATTTATTATAACT+CGG | + | chr5_3:12371916-12371935 | None:intergenic | 15.0% |
!!! | AACAATGATATTTATTCTTT+TGG | - | chr5_3:12372688-12372707 | Msa0799240:intron | 15.0% |
!! | TAATATCATAACAAAAACAT+AGG | + | chr5_3:12373168-12373187 | None:intergenic | 15.0% |
!! | CAAACAAATATAATCAAACA+TGG | - | chr5_3:12360140-12360159 | Msa0799240:three_prime_UTR | 20.0% |
!!! | TGTATGTTGTTGTTTTTTAA+CGG | - | chr5_3:12360807-12360826 | Msa0799240:CDS | 20.0% |
!! | TCACTTAAAAAGTTTATTTG+TGG | - | chr5_3:12360928-12360947 | Msa0799240:intron | 20.0% |
!! | TTATTTGTGGATTTAAATGA+AGG | - | chr5_3:12360941-12360960 | Msa0799240:intron | 20.0% |
!!! | ATCAAAAGATAAGTTTTTGT+AGG | + | chr5_3:12360992-12361011 | None:intergenic | 20.0% |
!!! | ACTTAGGCTTTAAAAAAATA+TGG | + | chr5_3:12361205-12361224 | None:intergenic | 20.0% |
!! | TAAAGATGTTCATAAGATAT+AGG | + | chr5_3:12361315-12361334 | None:intergenic | 20.0% |
!!! | CAATGTGATTTAAGTTTAAA+TGG | - | chr5_3:12361341-12361360 | Msa0799240:CDS | 20.0% |
!! | TTCATATTACTTAAATAGGT+CGG | - | chr5_3:12361592-12361611 | Msa0799240:CDS | 20.0% |
!!! | TTAAGCTTATTTAGCTTAAA+AGG | + | chr5_3:12361660-12361679 | None:intergenic | 20.0% |
!!! | CTTTATTTAAGAAAAAAGTC+TGG | - | chr5_3:12361696-12361715 | Msa0799240:CDS | 20.0% |
!! | AATTGAAAAAAATACATGTG+CGG | - | chr5_3:12361902-12361921 | Msa0799240:intron | 20.0% |
!! | TAGATAGAAAAAAAAGAAAG+AGG | - | chr5_3:12362605-12362624 | Msa0799240:intron | 20.0% |
!! | AGATAGAAAAAAAAGAAAGA+GGG | - | chr5_3:12362606-12362625 | Msa0799240:intron | 20.0% |
!! | CATAAATAAAGCATATTACT+GGG | + | chr5_3:12362726-12362745 | None:intergenic | 20.0% |
!! | ACATAAATAAAGCATATTAC+TGG | + | chr5_3:12362727-12362746 | None:intergenic | 20.0% |
!!! | TGTTTTTTTAATCATGCATT+TGG | - | chr5_3:12362891-12362910 | Msa0799240:intron | 20.0% |
!! | CTATAGTCTCTATAAATAAA+AGG | + | chr5_3:12363191-12363210 | None:intergenic | 20.0% |
!!! | CATTTTTTAATAATGTTGCA+CGG | + | chr5_3:12363391-12363410 | None:intergenic | 20.0% |
!!! | CAATTAAGTTTGTTATTTAG+CGG | + | chr5_3:12363587-12363606 | None:intergenic | 20.0% |
!! | ATCAAAAATTTCTCAAGAAA+AGG | + | chr5_3:12363617-12363636 | None:intergenic | 20.0% |
!!! | AGAATTTTAACGAAAATTCT+TGG | - | chr5_3:12363917-12363936 | Msa0799240:intron | 20.0% |
!!! | GAATTTTAACGAAAATTCTT+GGG | - | chr5_3:12363918-12363937 | Msa0799240:intron | 20.0% |
!! | CAGATCTCTTTAATAAAAAA+GGG | + | chr5_3:12363967-12363986 | None:intergenic | 20.0% |
!! | AACATATAATAATTCCTCAT+AGG | - | chr5_3:12364110-12364129 | Msa0799240:intron | 20.0% |
!! | TTGCATATAAAATTTCAGAA+TGG | + | chr5_3:12364512-12364531 | None:intergenic | 20.0% |
!!! | ATAGCATTTATATTAGCTTT+TGG | + | chr5_3:12364831-12364850 | None:intergenic | 20.0% |
!! | TAATATCTGGAAAAAATATC+TGG | - | chr5_3:12364866-12364885 | Msa0799240:intron | 20.0% |
!! | ATAATTAAAAACAGATGAAG+TGG | - | chr5_3:12365515-12365534 | Msa0799240:intron | 20.0% |
!!! | CAAATCTAAGTATGATTTTA+GGG | + | chr5_3:12365737-12365756 | None:intergenic | 20.0% |
!!! | TCAAATCTAAGTATGATTTT+AGG | + | chr5_3:12365738-12365757 | None:intergenic | 20.0% |
!! | ATATTCTCTATCTATAGATT+TGG | - | chr5_3:12365832-12365851 | Msa0799240:intron | 20.0% |
!!! | TTTTTTTTGGTACAAAAAAG+AGG | - | chr5_3:12366435-12366454 | Msa0799240:intron | 20.0% |
!!! | TTTTTTTGGTACAAAAAAGA+GGG | - | chr5_3:12366436-12366455 | Msa0799240:intron | 20.0% |
!!! | TAGTTGTTTAGTTTTTTCTT+TGG | + | chr5_3:12366469-12366488 | None:intergenic | 20.0% |
!! | TAACTACATATATGTCTATT+CGG | + | chr5_3:12366907-12366926 | None:intergenic | 20.0% |
!!! | ATTTGACCTATTTTAAACAT+GGG | + | chr5_3:12367062-12367081 | None:intergenic | 20.0% |
!!! | TATTTGACCTATTTTAAACA+TGG | + | chr5_3:12367063-12367082 | None:intergenic | 20.0% |
!! | AGATAATAATTAACACTTGA+CGG | - | chr5_3:12367333-12367352 | Msa0799240:intron | 20.0% |
!! | TGATATCTTTAAACTATCTT+AGG | + | chr5_3:12367545-12367564 | None:intergenic | 20.0% |
!! | GTGAAAGAAATTAAAAGAAA+TGG | - | chr5_3:12367578-12367597 | Msa0799240:intron | 20.0% |
!!! | AAGAAATTGGGAATTTTTAT+GGG | - | chr5_3:12368064-12368083 | Msa0799240:intron | 20.0% |
!!! | AAAGAAATTGGGAATTTTTA+TGG | - | chr5_3:12368134-12368153 | Msa0799240:intron | 20.0% |
!!! | AAGAAATTGGGAATTTTTAT+GGG | - | chr5_3:12368064-12368083 | Msa0799240:intron | 20.0% |
!!! | AAGAAATTGGGAATTTTTAT+GGG | - | chr5_3:12368064-12368083 | Msa0799240:intron | 20.0% |
!! | TCTTGAATAGATCTTAAAAA+TGG | - | chr5_3:12368555-12368574 | Msa0799240:intron | 20.0% |
!!! | CTCAACTATTTAAAATTTCT+TGG | - | chr5_3:12368753-12368772 | Msa0799240:intron | 20.0% |
!!! | TGTTGATGAAAAATTTTACA+CGG | + | chr5_3:12369012-12369031 | None:intergenic | 20.0% |
!!! | AAAATTTCCTTCAACATTTT+TGG | - | chr5_3:12369047-12369066 | Msa0799240:CDS | 20.0% |
!! | TTATATGGATCATTTACTTA+AGG | - | chr5_3:12369154-12369173 | Msa0799240:five_prime_UTR | 20.0% |
!!! | CTATGCTTATTTTTTATTGA+GGG | + | chr5_3:12369651-12369670 | None:intergenic | 20.0% |
!!! | TCTATGCTTATTTTTTATTG+AGG | + | chr5_3:12369652-12369671 | None:intergenic | 20.0% |
!! | AAAAAAATCATGGGTAATTA+GGG | + | chr5_3:12369780-12369799 | None:intergenic | 20.0% |
!! | AAAAAAAATCATGGGTAATT+AGG | + | chr5_3:12369781-12369800 | None:intergenic | 20.0% |
!! | GGAAAAAGAAAAAAAATCAT+GGG | + | chr5_3:12369789-12369808 | None:intergenic | 20.0% |
!!! | TGTCAAACGTTTATTTTTAA+AGG | + | chr5_3:12370057-12370076 | None:intergenic | 20.0% |
!! | TCTTATAAATTCATGTTGTT+TGG | + | chr5_3:12370334-12370353 | None:intergenic | 20.0% |
!!! | ATTGTGAATTGATTTATGTT+TGG | + | chr5_3:12370380-12370399 | None:intergenic | 20.0% |
!! | GATTGATTATCTTCATAATT+TGG | - | chr5_3:12370529-12370548 | Msa0799240:intron | 20.0% |
!!! | CATAATAAAAACATAGGTTT+TGG | + | chr5_3:12370790-12370809 | None:intergenic | 20.0% |
!!! | AACATTTGAAGTAATAAAGA+AGG | - | chr5_3:12371070-12371089 | Msa0799240:intron | 20.0% |
!! | AAGATTAACAAGTTCATATA+TGG | - | chr5_3:12371689-12371708 | Msa0799240:intron | 20.0% |
!! | AGATTAACAAGTTCATATAT+GGG | - | chr5_3:12371690-12371709 | Msa0799240:intron | 20.0% |
!! | CATATATTAAGATATATGGT+TGG | - | chr5_3:12371766-12371785 | Msa0799240:intron | 20.0% |
!! | ATCAATACTAAATGAGAAAA+GGG | + | chr5_3:12371809-12371828 | None:intergenic | 20.0% |
!! | AATCAATACTAAATGAGAAA+AGG | + | chr5_3:12371810-12371829 | None:intergenic | 20.0% |
!!! | AAGAAAGGTATAAATAAACA+AGG | + | chr5_3:12372737-12372756 | None:intergenic | 20.0% |
!! | TGATAAATCAATAATGTCAT+AGG | + | chr5_3:12372760-12372779 | None:intergenic | 20.0% |
!! | AATATGAAGATAATTACATG+CGG | + | chr5_3:12373032-12373051 | None:intergenic | 20.0% |
!! | ATTATTCCAAACAATTCTTA+AGG | - | chr5_3:12373315-12373334 | Msa0799240:five_prime_UTR | 20.0% |
!! | TAATTATTGATACATATGAC+AGG | - | chr5_3:12373378-12373397 | Msa0799240:five_prime_UTR | 20.0% |
!!! | TACATAAACAGCGTATTTTT+TGG | + | chr5_3:12360409-12360428 | None:intergenic | 25.0% |
! | CGACATGATTATAACAAATA+CGG | - | chr5_3:12361128-12361147 | Msa0799240:intron | 25.0% |
! | ATGATTATAACAAATACGGA+TGG | - | chr5_3:12361132-12361151 | Msa0799240:intron | 25.0% |
! | TGATTATAACAAATACGGAT+GGG | - | chr5_3:12361133-12361152 | Msa0799240:intron | 25.0% |
!!! | ATTTTTTTAAAGCCTAAGTC+TGG | - | chr5_3:12361206-12361225 | Msa0799240:intron | 25.0% |
!! | TAAGATATAGGCTTTTAAAC+AGG | + | chr5_3:12361303-12361322 | None:intergenic | 25.0% |
!!! | CTCTTTTGATAATTAACACA+AGG | - | chr5_3:12361397-12361416 | Msa0799240:CDS | 25.0% |
! | AATAAGCTTAAAAAAAGCCT+AGG | - | chr5_3:12361669-12361688 | Msa0799240:CDS | 25.0% |
! | ATTGACGAAACTTACAATTT+CGG | - | chr5_3:12362053-12362072 | Msa0799240:intron | 25.0% |
! | ATTACAATACTTCTTGTCTT+TGG | - | chr5_3:12362137-12362156 | Msa0799240:intron | 25.0% |
! | TAAACAAATGTTCTTCGTTT+CGG | + | chr5_3:12362409-12362428 | None:intergenic | 25.0% |
! | CAAAAAAAAAAGCAACTGAA+TGG | + | chr5_3:12363061-12363080 | None:intergenic | 25.0% |
!!! | TCAGTTGCTTTTTTTTTTGA+AGG | - | chr5_3:12363062-12363081 | Msa0799240:intron | 25.0% |
!! | GATTTTCAAAAGCAACTAAA+TGG | + | chr5_3:12363089-12363108 | None:intergenic | 25.0% |
!!! | TAGTCATAGTCTCTATTTTT+TGG | + | chr5_3:12363225-12363244 | None:intergenic | 25.0% |
!! | CAAATTTTCCTGTAGTAATT+TGG | + | chr5_3:12363258-12363277 | None:intergenic | 25.0% |
! | CAAATTACTACAGGAAAATT+TGG | - | chr5_3:12363256-12363275 | Msa0799240:intron | 25.0% |
! | TGATCACGCATATATATTTA+TGG | + | chr5_3:12363286-12363305 | None:intergenic | 25.0% |
! | CGCTAAATAACAAACTTAAT+TGG | - | chr5_3:12363585-12363604 | Msa0799240:intron | 25.0% |
! | GACTAATTAATTAGTGTCAA+AGG | - | chr5_3:12363759-12363778 | Msa0799240:intron | 25.0% |
!! | CTATAAATAGATGTGCATTT+TGG | - | chr5_3:12363818-12363837 | Msa0799240:intron | 25.0% |
! | GCAGATCTCTTTAATAAAAA+AGG | + | chr5_3:12363968-12363987 | None:intergenic | 25.0% |
! | GTAAAATTGTTAACGAAGTT+TGG | + | chr5_3:12364018-12364037 | None:intergenic | 25.0% |
! | ATATGTTGCTCACAAAAATA+AGG | + | chr5_3:12364151-12364170 | None:intergenic | 25.0% |
!! | AAATTACCTGCGAAAATTTT+GGG | + | chr5_3:12364260-12364279 | None:intergenic | 25.0% |
!! | AAAATTACCTGCGAAAATTT+TGG | + | chr5_3:12364261-12364280 | None:intergenic | 25.0% |
! | AGTGTTTGATACATATTTAC+AGG | - | chr5_3:12364547-12364566 | Msa0799240:intron | 25.0% |
! | AACATTACAAGAGATAAAGA+AGG | - | chr5_3:12364587-12364606 | Msa0799240:intron | 25.0% |
! | TCATCAAGCATAATATGAAT+TGG | + | chr5_3:12364706-12364725 | None:intergenic | 25.0% |
! | TTGTTTGTAAGTTATTGTTG+TGG | - | chr5_3:12364797-12364816 | Msa0799240:intron | 25.0% |
! | CAAATCTGCAACATAATTAT+AGG | + | chr5_3:12365166-12365185 | None:intergenic | 25.0% |
! | ATACATTGGTATAAACATTG+TGG | - | chr5_3:12365321-12365340 | Msa0799240:intron | 25.0% |
! | TGATTTGAGAAAGTAGAATA+TGG | - | chr5_3:12365621-12365640 | Msa0799240:intron | 25.0% |
! | ATTGAATCCAACAAATAAGA+AGG | - | chr5_3:12365925-12365944 | Msa0799240:intron | 25.0% |
! | TTGAATCCAACAAATAAGAA+GGG | - | chr5_3:12365926-12365945 | Msa0799240:intron | 25.0% |
! | CAACTAAACTTCTTTGATTA+GGG | + | chr5_3:12365964-12365983 | None:intergenic | 25.0% |
! | TTAATCATTCAGAAAGCTAA+TGG | + | chr5_3:12366101-12366120 | None:intergenic | 25.0% |
! | TTTATACTGCATCATTACTT+AGG | - | chr5_3:12366142-12366161 | Msa0799240:intron | 25.0% |
! | TTATACTGCATCATTACTTA+GGG | - | chr5_3:12366143-12366162 | Msa0799240:intron | 25.0% |
!! | TCTCTATTTTCCTTTAAACA+TGG | + | chr5_3:12366251-12366270 | None:intergenic | 25.0% |
! | TTCAAAATTGCTTATTGACA+TGG | + | chr5_3:12366744-12366763 | None:intergenic | 25.0% |
! | AACTACATATATGTCTATTC+GGG | + | chr5_3:12366906-12366925 | None:intergenic | 25.0% |
!! | AGAGACGATTTTACATTAAA+AGG | + | chr5_3:12367004-12367023 | None:intergenic | 25.0% |
! | TAATCAATCCTCAAGATTTA+AGG | - | chr5_3:12367452-12367471 | Msa0799240:intron | 25.0% |
! | AATCAATCCTCAAGATTTAA+GGG | - | chr5_3:12367453-12367472 | Msa0799240:intron | 25.0% |
!!! | TAGCTAGTTTTCTCTAAATA+TGG | - | chr5_3:12367477-12367496 | Msa0799240:intron | 25.0% |
! | ATTGTTGAAATAAAAAGGAG+AGG | + | chr5_3:12367504-12367523 | None:intergenic | 25.0% |
! | ATCTTTAAACTATCTTAGGT+GGG | + | chr5_3:12367541-12367560 | None:intergenic | 25.0% |
! | TATCTTTAAACTATCTTAGG+TGG | + | chr5_3:12367542-12367561 | None:intergenic | 25.0% |
! | AAAAAAAAGCAAATTCACGA+TGG | + | chr5_3:12367851-12367870 | None:intergenic | 25.0% |
! | TATTCATGGAGTTATCAATT+GGG | + | chr5_3:12367983-12368002 | None:intergenic | 25.0% |
! | AAGAAAGAAGATGAAGAAAT+TGG | - | chr5_3:12368051-12368070 | Msa0799240:intron | 25.0% |
! | AGAAAGAAGATGAAGAAATT+GGG | - | chr5_3:12368052-12368071 | Msa0799240:intron | 25.0% |
!! | GAAGAAATTGGGAATTTTTA+TGG | - | chr5_3:12368063-12368082 | Msa0799240:intron | 25.0% |
! | AAGAAAGAAGATGAAGAAAT+TGG | - | chr5_3:12368051-12368070 | Msa0799240:intron | 25.0% |
! | AGAAAGAAGATGAAGAAATT+GGG | - | chr5_3:12368052-12368071 | Msa0799240:intron | 25.0% |
!! | GAAGAAATTGGGAATTTTTA+TGG | - | chr5_3:12368063-12368082 | Msa0799240:intron | 25.0% |
! | ATTACTCAAAAACAAAGCAT+GGG | + | chr5_3:12368334-12368353 | None:intergenic | 25.0% |
! | TCCATAAACCTTAATTTAAC+CGG | - | chr5_3:12368594-12368613 | Msa0799240:intron | 25.0% |
!! | TATGTTTACCGGTTAAATTA+AGG | + | chr5_3:12368605-12368624 | None:intergenic | 25.0% |
! | TTCATTAAGGATATGTTTAC+CGG | + | chr5_3:12368616-12368635 | None:intergenic | 25.0% |
! | ATTAAATGAGAAATGCTAAC+CGG | + | chr5_3:12368651-12368670 | None:intergenic | 25.0% |
!!! | GGTGATTGTTTTTATAAGTA+GGG | + | chr5_3:12368784-12368803 | None:intergenic | 25.0% |
!!! | AGGTGATTGTTTTTATAAGT+AGG | + | chr5_3:12368785-12368804 | None:intergenic | 25.0% |
!!! | AAGCTAGTTTTTTTAGAGAT+GGG | + | chr5_3:12368866-12368885 | None:intergenic | 25.0% |
!!! | TAAGCTAGTTTTTTTAGAGA+TGG | + | chr5_3:12368867-12368886 | None:intergenic | 25.0% |
! | TAGCTTACTTGTAAATTGTA+AGG | - | chr5_3:12368880-12368899 | Msa0799240:intron | 25.0% |
!!! | GTTGAAGGAAATTTTTTACA+GGG | + | chr5_3:12369042-12369061 | None:intergenic | 25.0% |
!!! | TGTTGAAGGAAATTTTTTAC+AGG | + | chr5_3:12369043-12369062 | None:intergenic | 25.0% |
! | TTAAGAACCAAAAATGTTGA+AGG | + | chr5_3:12369057-12369076 | None:intergenic | 25.0% |
!!! | TTTGGTTCTTAAAATGCTAA+AGG | - | chr5_3:12369065-12369084 | Msa0799240:exon | 25.0% |
!! | TTGGTTCTTAAAATGCTAAA+GGG | - | chr5_3:12369066-12369085 | Msa0799240:exon | 25.0% |
! | TCTATTGAATCTGAAAAATG+CGG | - | chr5_3:12369267-12369286 | Msa0799240:intron | 25.0% |
!! | AGTTTGAAATGCAATTTAAG+AGG | + | chr5_3:12369318-12369337 | None:intergenic | 25.0% |
!!! | GCTTTTTTTTACATCTTGTT+TGG | - | chr5_3:12369435-12369454 | Msa0799240:intron | 25.0% |
!! | AATATCAAAGCTTTTTAGAC+AGG | - | chr5_3:12369516-12369535 | Msa0799240:intron | 25.0% |
! | GTATATTGTGTGTTAAAATC+AGG | - | chr5_3:12369678-12369697 | Msa0799240:intron | 25.0% |
! | GGGAAAAAGAAAAAAAATCA+TGG | + | chr5_3:12369790-12369809 | None:intergenic | 25.0% |
!!! | AAAAATAAGTAATGGGCTTT+TGG | + | chr5_3:12369976-12369995 | None:intergenic | 25.0% |
!!! | GCCCATTACTTATTTTTTTA+AGG | - | chr5_3:12369979-12369998 | Msa0799240:intron | 25.0% |
! | GAATGCATAATTACCAAAAT+GGG | + | chr5_3:12370287-12370306 | None:intergenic | 25.0% |
! | TGAATGCATAATTACCAAAA+TGG | + | chr5_3:12370288-12370307 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | + | chr5_3:12370741-12370760 | None:intergenic | 25.0% |
! | TAAGCAAAAATCAACATTCT+AGG | - | chr5_3:12370655-12370674 | Msa0799240:intron | 25.0% |
! | TAAGCAAAAATCAACATTCT+AGG | + | chr5_3:12370655-12370674 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | chr5_3:12370741-12370760 | Msa0799240:intron | 25.0% |
!! | AGATAAAATTTTCAAATCCG+AGG | - | chr5_3:12370908-12370927 | Msa0799240:intron | 25.0% |
!! | ATATAGTTGATGCATATATC+AGG | - | chr5_3:12371030-12371049 | Msa0799240:intron | 25.0% |
! | ACATCTATGAATATGTCAAA+GGG | - | chr5_3:12371293-12371312 | Msa0799240:intron | 25.0% |
! | AAATACTAACAAGTGTTCTT+AGG | - | chr5_3:12371447-12371466 | Msa0799240:intron | 25.0% |
! | TGATCTTGTATACTAAAGAT+TGG | + | chr5_3:12371558-12371577 | None:intergenic | 25.0% |
! | ATACTTCGAGTGAATATAAT+GGG | + | chr5_3:12371660-12371679 | None:intergenic | 25.0% |
! | ACTAATCAATGACCAAATAA+TGG | + | chr5_3:12372044-12372063 | None:intergenic | 25.0% |
!! | TTATTTGGTCATTGATTAGT+TGG | - | chr5_3:12372044-12372063 | Msa0799240:intron | 25.0% |
! | TTGGTGTATACAAAAACATT+TGG | - | chr5_3:12372608-12372627 | Msa0799240:intron | 25.0% |
! | TATGCTTAATGACTTTCTTA+AGG | - | chr5_3:12372642-12372661 | Msa0799240:intron | 25.0% |
!! | TAATTACATGCGGTAATTTT+GGG | + | chr5_3:12373022-12373041 | None:intergenic | 25.0% |
!! | ATAATTACATGCGGTAATTT+TGG | + | chr5_3:12373023-12373042 | None:intergenic | 25.0% |
! | GTAATTATCTTCATATTTCG+AGG | - | chr5_3:12373035-12373054 | Msa0799240:five_prime_UTR | 25.0% |
!! | CATAACAAAAACATAGGTTT+TGG | + | chr5_3:12373162-12373181 | None:intergenic | 25.0% |
!! | AGATGAAATTTTTAAACCAG+AGG | - | chr5_3:12373246-12373265 | Msa0799240:five_prime_UTR | 25.0% |
! | GATAAACCTTAAGAATTGTT+TGG | + | chr5_3:12373324-12373343 | None:intergenic | 25.0% |
!! | TTTGAAGTAATAAAGAATGC+TGG | - | chr5_3:12373422-12373441 | Msa0799240:five_prime_UTR | 25.0% |
!! | ATTGTTTTCATGAAGCATAA+TGG | + | chr5_3:12373510-12373529 | None:intergenic | 25.0% |
! | ACATATTCATAGATGTGAAT+TGG | + | chr5_3:12371289-12371308 | None:intergenic | 25.0% |
! | TCACATCTATGAATATGTTA+AGG | - | chr5_3:12373539-12373558 | Msa0799240:five_prime_UTR | 25.0% |
! | CACATCTATGAATATGTTAA+GGG | - | chr5_3:12373540-12373559 | Msa0799240:five_prime_UTR | 25.0% |
! | GTGTTATGCAAATTTCAATA+AGG | - | chr5_3:12373636-12373655 | Msa0799240:five_prime_UTR | 25.0% |
ATAATCAAACATGGTGAACA+CGG | - | chr5_3:12360149-12360168 | Msa0799240:three_prime_UTR | 30.0% | |
! | AGGTACAGTTATGAGATTTT+GGG | - | chr5_3:12360248-12360267 | Msa0799240:exon | 30.0% |
!!! | TTTTAGTTTGGACTTGGAAA+TGG | + | chr5_3:12360286-12360305 | None:intergenic | 30.0% |
AAAATACGCTGTTTATGTAC+CGG | - | chr5_3:12360410-12360429 | Msa0799240:intron | 30.0% | |
AAAGGAGTCTATGATTAGTA+AGG | - | chr5_3:12360644-12360663 | Msa0799240:intron | 30.0% | |
!! | AGGCTTTAAAAAAATATGGC+AGG | + | chr5_3:12361201-12361220 | None:intergenic | 30.0% |
TTCTTAAATAAAGAAGGCCT+AGG | + | chr5_3:12361689-12361708 | None:intergenic | 30.0% | |
ATGAAATCTAGTCGTATGTA+GGG | + | chr5_3:12361780-12361799 | None:intergenic | 30.0% | |
TACATACGACTAGATTTCAT+GGG | - | chr5_3:12361780-12361799 | Msa0799240:intron | 30.0% | |
AATTCATCTGTTAGTCAACA+TGG | + | chr5_3:12361959-12361978 | None:intergenic | 30.0% | |
TGACTAACAGATGAATTTGA+CGG | - | chr5_3:12361962-12361981 | Msa0799240:intron | 30.0% | |
! | AAATTTTGTTAATGTCGGAG+AGG | - | chr5_3:12362028-12362047 | Msa0799240:intron | 30.0% |
GCAATTCACTTAGTGTAAAT+AGG | + | chr5_3:12362085-12362104 | None:intergenic | 30.0% | |
GAAGCTTGAAAATAAACACA+TGG | - | chr5_3:12362249-12362268 | Msa0799240:intron | 30.0% | |
TGAAAATAAACACATGGTAC+AGG | - | chr5_3:12362255-12362274 | Msa0799240:intron | 30.0% | |
!! | AAATTTTGATCCATAGAGTG+AGG | - | chr5_3:12362364-12362383 | Msa0799240:intron | 30.0% |
!! | AATTTTGATCCATAGAGTGA+GGG | - | chr5_3:12362365-12362384 | Msa0799240:intron | 30.0% |
!! | AAAAAAATTTAAGGGCGTCA+TGG | + | chr5_3:12362804-12362823 | None:intergenic | 30.0% |
!!! | CTAGGTACATGTGATTTTTT+CGG | + | chr5_3:12362976-12362995 | None:intergenic | 30.0% |
!!! | TCATAGTCTCTATTTTTTGG+TGG | + | chr5_3:12363222-12363241 | None:intergenic | 30.0% |
! | TTTTCCTGTAGTAATTTGGA+CGG | + | chr5_3:12363254-12363273 | None:intergenic | 30.0% |
TTTCACAAAATGGTTACACT+AGG | + | chr5_3:12363418-12363437 | None:intergenic | 30.0% | |
! | TGTTATTTAGCGGAAATCAA+GGG | + | chr5_3:12363577-12363596 | None:intergenic | 30.0% |
!! | TTGTTATTTAGCGGAAATCA+AGG | + | chr5_3:12363578-12363597 | None:intergenic | 30.0% |
CACTAATTAATTAGTCACAG+TGG | + | chr5_3:12363755-12363774 | None:intergenic | 30.0% | |
! | AAATAGATGTGCATTTTGGA+AGG | - | chr5_3:12363822-12363841 | Msa0799240:intron | 30.0% |
!!! | CGGTTTTTTTTATACCTATG+AGG | + | chr5_3:12364127-12364146 | None:intergenic | 30.0% |
AGCAACATATCATTAATTGC+AGG | - | chr5_3:12364161-12364180 | Msa0799240:intron | 30.0% | |
! | TTTTATATGCAATCGATCTG+TGG | - | chr5_3:12364520-12364539 | Msa0799240:intron | 30.0% |
ATACATATTTACAGGAAGCT+GGG | - | chr5_3:12364555-12364574 | Msa0799240:intron | 30.0% | |
GCATATTCATTGATATGAAC+TGG | + | chr5_3:12364742-12364761 | None:intergenic | 30.0% | |
CATATCAATGAATATGCCAA+CGG | - | chr5_3:12364745-12364764 | Msa0799240:intron | 30.0% | |
TTTATTACTTGCGTACGATT+TGG | + | chr5_3:12365426-12365445 | None:intergenic | 30.0% | |
GTCTTATCCAATGCAAAATT+AGG | - | chr5_3:12365555-12365574 | Msa0799240:intron | 30.0% | |
! | ACAACAACCTAATTTTGCAT+TGG | + | chr5_3:12365565-12365584 | None:intergenic | 30.0% |
AAACTTCCACTTATACATCA+CGG | + | chr5_3:12365649-12365668 | None:intergenic | 30.0% | |
AATTGTAACTGGTTGAATTG+AGG | + | chr5_3:12365686-12365705 | None:intergenic | 30.0% | |
AATTCAACCAGTTACAATTG+CGG | - | chr5_3:12365687-12365706 | Msa0799240:intron | 30.0% | |
CTAAGCAATTTAGTATTGTC+TGG | - | chr5_3:12365780-12365799 | Msa0799240:intron | 30.0% | |
CAATTTAGTATTGTCTGGTT+CGG | - | chr5_3:12365785-12365804 | Msa0799240:intron | 30.0% | |
CTATAGATTTGGCATAGAAA+TGG | - | chr5_3:12365843-12365862 | Msa0799240:intron | 30.0% | |
GCAACTAAACTTCTTTGATT+AGG | + | chr5_3:12365965-12365984 | None:intergenic | 30.0% | |
TATACCATAGAGAAAACAAG+AGG | - | chr5_3:12366022-12366041 | Msa0799240:intron | 30.0% | |
TATACTGCATCATTACTTAG+GGG | - | chr5_3:12366144-12366163 | Msa0799240:intron | 30.0% | |
!!! | TGTTTGCTTGTTTTTCAAGT+TGG | + | chr5_3:12366210-12366229 | None:intergenic | 30.0% |
! | GGAAAATAGAGCATTTATTG+AGG | - | chr5_3:12366334-12366353 | Msa0799240:intron | 30.0% |
!! | TAGTAGAAGTGCGATTTTAT+TGG | - | chr5_3:12366391-12366410 | Msa0799240:intron | 30.0% |
! | TCCTATTTGATGATATTTCC+GGG | + | chr5_3:12366517-12366536 | None:intergenic | 30.0% |
! | CTCCTATTTGATGATATTTC+CGG | + | chr5_3:12366518-12366537 | None:intergenic | 30.0% |
! | GAAATCTTTTAGATCGTAGT+TGG | + | chr5_3:12366667-12366686 | None:intergenic | 30.0% |
AGAAATGTGGGGTTTATATT+CGG | + | chr5_3:12366819-12366838 | None:intergenic | 30.0% | |
TGTCAAAATAATGAACGACA+TGG | - | chr5_3:12367375-12367394 | Msa0799240:intron | 30.0% | |
! | ATATGCAGAATTGTTTTCCT+CGG | + | chr5_3:12367803-12367822 | None:intergenic | 30.0% |
GAAAACAATTCTGCATATGA+AGG | - | chr5_3:12367805-12367824 | Msa0799240:intron | 30.0% | |
!!! | CTTCTTCCATTTCGTTTTTT+GGG | - | chr5_3:12367902-12367921 | Msa0799240:intron | 30.0% |
ACAAAACCCAAAAAACGAAA+TGG | + | chr5_3:12367911-12367930 | None:intergenic | 30.0% | |
CTATTCATGGAGTTATCAAT+TGG | + | chr5_3:12367984-12368003 | None:intergenic | 30.0% | |
! | CAATTGATAACTCCATGAAT+AGG | - | chr5_3:12367982-12368001 | Msa0799240:intron | 30.0% |
GTACTGCAATTGAAGTAAAA+AGG | + | chr5_3:12368011-12368030 | None:intergenic | 30.0% | |
TATGAACAAATCCAGAACAA+CGG | - | chr5_3:12368229-12368248 | Msa0799240:intron | 30.0% | |
!!! | AAATTTTGAAACCGTTGTTC+TGG | + | chr5_3:12368243-12368262 | None:intergenic | 30.0% |
! | AACGGTTTCAAAATTTTGTG+AGG | - | chr5_3:12368247-12368266 | Msa0799240:intron | 30.0% |
GATTACTCAAAAACAAAGCA+TGG | + | chr5_3:12368335-12368354 | None:intergenic | 30.0% | |
ACCGGTTAAATTAAGGTTTA+TGG | + | chr5_3:12368598-12368617 | None:intergenic | 30.0% | |
ACATATCCTTAATGAATGTC+CGG | - | chr5_3:12368620-12368639 | Msa0799240:intron | 30.0% | |
AACAATCACCTCTATATACA+CGG | - | chr5_3:12368794-12368813 | Msa0799240:intron | 30.0% | |
! | TTTACACGGACTAAAAATGT+TGG | + | chr5_3:12368998-12369017 | None:intergenic | 30.0% |
!! | TTTTTCAGATTCAATAGAGC+TGG | + | chr5_3:12369265-12369284 | None:intergenic | 30.0% |
TGAAATGCAATTTAAGAGGA+AGG | + | chr5_3:12369314-12369333 | None:intergenic | 30.0% | |
! | TTTACATCTTGTTTGGTACT+AGG | - | chr5_3:12369442-12369461 | Msa0799240:intron | 30.0% |
GATACGATTTATAACTCTGT+GGG | + | chr5_3:12369810-12369829 | None:intergenic | 30.0% | |
AACCAAAATCATCATTGTCT+GGG | + | chr5_3:12369847-12369866 | None:intergenic | 30.0% | |
AAACCAAAATCATCATTGTC+TGG | + | chr5_3:12369848-12369867 | None:intergenic | 30.0% | |
! | TTGGTTTCACTGATCAATTT+TGG | - | chr5_3:12369861-12369880 | Msa0799240:intron | 30.0% |
!!! | ACTGATCAATTTTGGTTTCA+CGG | - | chr5_3:12369869-12369888 | Msa0799240:intron | 30.0% |
TTAGAGATGAGGTTGAAATT+GGG | - | chr5_3:12369948-12369967 | Msa0799240:intron | 30.0% | |
CTAATGACTATGTGTATGTT+TGG | + | chr5_3:12370473-12370492 | None:intergenic | 30.0% | |
! | CAATATTCCAAAATTTTCCC+AGG | - | chr5_3:12370505-12370524 | Msa0799240:intron | 30.0% |
ATGAAGATAATCAATCACCT+GGG | + | chr5_3:12370525-12370544 | None:intergenic | 30.0% | |
TATGAAGATAATCAATCACC+TGG | + | chr5_3:12370526-12370545 | None:intergenic | 30.0% | |
ATTAGAAAATATACACCCTC+CGG | + | chr5_3:12370763-12370782 | None:intergenic | 30.0% | |
! | AATCCATCTCCATCTTTTAT+GGG | - | chr5_3:12370877-12370896 | Msa0799240:intron | 30.0% |
! | TTTAATGTTTTCTGCAACCT+CGG | + | chr5_3:12370928-12370947 | None:intergenic | 30.0% |
TGCAGAAAACATTAAAGAGT+AGG | - | chr5_3:12370932-12370951 | Msa0799240:intron | 30.0% | |
! | TTTGAAGTAATAAAGAAGGC+TGG | - | chr5_3:12371074-12371093 | Msa0799240:intron | 30.0% |
CAGAAGAAAGAAACTTCTTT+AGG | + | chr5_3:12371242-12371261 | None:intergenic | 30.0% | |
CACATCTATGAATATGTCAA+AGG | - | chr5_3:12371292-12371311 | Msa0799240:intron | 30.0% | |
GATACTTCGAGTGAATATAA+TGG | + | chr5_3:12371661-12371680 | None:intergenic | 30.0% | |
ATACTAAATGAGAAAAGGGT+GGG | + | chr5_3:12371805-12371824 | None:intergenic | 30.0% | |
AATACTAAATGAGAAAAGGG+TGG | + | chr5_3:12371806-12371825 | None:intergenic | 30.0% | |
!! | TTATAACTCGGTTTGCTAAA+AGG | + | chr5_3:12371904-12371923 | None:intergenic | 30.0% |
GCAAACCGAGTTATAATAAA+TGG | - | chr5_3:12371908-12371927 | Msa0799240:intron | 30.0% | |
AATGGAAAATGCTAGTACTA+AGG | - | chr5_3:12371926-12371945 | Msa0799240:intron | 30.0% | |
AGAGAAAAACATGTTGAACA+CGG | - | chr5_3:12372015-12372034 | Msa0799240:intron | 30.0% | |
!! | TTTTAGCTAATGCCATGATT+TGG | + | chr5_3:12372252-12372271 | None:intergenic | 30.0% |
! | GTTCCAGACTTAATTTTCTT+CGG | - | chr5_3:12372286-12372305 | Msa0799240:intron | 30.0% |
TTATTGCCATCTTCTATTGA+AGG | - | chr5_3:12372565-12372584 | Msa0799240:intron | 30.0% | |
AAGTCATTAAGCATACGATT+GGG | + | chr5_3:12372637-12372656 | None:intergenic | 30.0% | |
AAAGTCATTAAGCATACGAT+TGG | + | chr5_3:12372638-12372657 | None:intergenic | 30.0% | |
CAATAATGTCATAGGAAGAA+AGG | + | chr5_3:12372752-12372771 | None:intergenic | 30.0% | |
ACATACTTGATGAGCATTAA+TGG | - | chr5_3:12372817-12372836 | Msa0799240:intron | 30.0% | |
ATAGCCTCGAAATATATATG+CGG | + | chr5_3:12373096-12373115 | None:intergenic | 30.0% | |
!!! | AACATAGGTTTTGGAAGAAT+TGG | + | chr5_3:12373153-12373172 | None:intergenic | 30.0% |
! | TGCAGAGAATACATCTTTTA+TGG | - | chr5_3:12373215-12373234 | Msa0799240:five_prime_UTR | 30.0% |
! | GCAGAGAATACATCTTTTAT+GGG | - | chr5_3:12373216-12373235 | Msa0799240:five_prime_UTR | 30.0% |
! | CAGAGAATACATCTTTTATG+GGG | - | chr5_3:12373217-12373236 | Msa0799240:five_prime_UTR | 30.0% |
TTATTGATACATATGACAGG+AGG | - | chr5_3:12373381-12373400 | Msa0799240:five_prime_UTR | 30.0% | |
AATAAAGAATGCTGGTCATT+TGG | - | chr5_3:12373430-12373449 | Msa0799240:five_prime_UTR | 30.0% | |
AACGACCATGTATTTACAAT+AGG | - | chr5_3:12373462-12373481 | Msa0799240:intron | 30.0% | |
TGGAAGAAAGAAACTTCTTT+AGG | + | chr5_3:12373490-12373509 | None:intergenic | 30.0% | |
TTCAATAAGGCATGTTATGT+TGG | - | chr5_3:12373649-12373668 | Msa0799240:five_prime_UTR | 30.0% | |
! | TAATTTGGACACTGGTTAGT+TGG | - | chr5_3:12360178-12360197 | Msa0799240:three_prime_UTR | 35.0% |
! | AATTTGGACACTGGTTAGTT+GGG | - | chr5_3:12360179-12360198 | Msa0799240:three_prime_UTR | 35.0% |
CAAAATCTCATAACTGTACC+TGG | + | chr5_3:12360249-12360268 | None:intergenic | 35.0% | |
! | CAGGTACAGTTATGAGATTT+TGG | - | chr5_3:12360247-12360266 | Msa0799240:exon | 35.0% |
!!! | TTTGGGTTTTAGTTTGGACT+TGG | + | chr5_3:12360292-12360311 | None:intergenic | 35.0% |
!!! | TATGGGTTTGGGTTTTAGTT+TGG | + | chr5_3:12360298-12360317 | None:intergenic | 35.0% |
!! | TTTTGGCTAAAGGGTTGATT+TGG | + | chr5_3:12360392-12360411 | None:intergenic | 35.0% |
!!! | CAGCGTATTTTTTGGCTAAA+GGG | + | chr5_3:12360401-12360420 | None:intergenic | 35.0% |
!!! | ACAGCGTATTTTTTGGCTAA+AGG | + | chr5_3:12360402-12360421 | None:intergenic | 35.0% |
! | GTACCGGACTTAATTTTCTT+TGG | - | chr5_3:12360426-12360445 | Msa0799240:intron | 35.0% |
CCACCAAAGAAAATTAAGTC+CGG | + | chr5_3:12360432-12360451 | None:intergenic | 35.0% | |
AAAATGGCTGAGATGTATAG+TGG | - | chr5_3:12360579-12360598 | Msa0799240:intron | 35.0% | |
AAATGGCTGAGATGTATAGT+GGG | - | chr5_3:12360580-12360599 | Msa0799240:intron | 35.0% | |
TTAATGCCATCTTCTGTTGA+AGG | - | chr5_3:12360705-12360724 | Msa0799240:intron | 35.0% | |
TAAGAAAGTCCTTGATGAGA+CGG | + | chr5_3:12360782-12360801 | None:intergenic | 35.0% | |
TCTCATCAAGGACTTTCTTA+AGG | - | chr5_3:12360782-12360801 | Msa0799240:CDS | 35.0% | |
TGTGGATTTAAATGAAGGAC+CGG | - | chr5_3:12360946-12360965 | Msa0799240:intron | 35.0% | |
GAACTAATCATTGAGCTATC+CGG | + | chr5_3:12360968-12360987 | None:intergenic | 35.0% | |
TAACAAATACGGATGGGAAT+AGG | - | chr5_3:12361139-12361158 | Msa0799240:intron | 35.0% | |
CTAAAAAGTAGGTCTATGAC+AGG | + | chr5_3:12361239-12361258 | None:intergenic | 35.0% | |
!!! | CTGTCATAGACCTACTTTTT+AGG | - | chr5_3:12361237-12361256 | Msa0799240:intron | 35.0% |
TATCAGGCTTTCAGAAAGTT+AGG | + | chr5_3:12361269-12361288 | None:intergenic | 35.0% | |
CATGAAATCTAGTCGTATGT+AGG | + | chr5_3:12361781-12361800 | None:intergenic | 35.0% | |
CTACATACGACTAGATTTCA+TGG | - | chr5_3:12361779-12361798 | Msa0799240:intron | 35.0% | |
ACATACGACTAGATTTCATG+GGG | - | chr5_3:12361781-12361800 | Msa0799240:intron | 35.0% | |
TAACAGATGAATTTGACGGA+GGG | - | chr5_3:12361966-12361985 | Msa0799240:intron | 35.0% | |
GCTTAACGTTATGCAATTTC+TGG | - | chr5_3:12361996-12362015 | Msa0799240:intron | 35.0% | |
ACGAAACTTACAATTTCGGA+GGG | - | chr5_3:12362057-12362076 | Msa0799240:intron | 35.0% | |
AACACTGTTTGGCTATTGAA+AGG | + | chr5_3:12362189-12362208 | None:intergenic | 35.0% | |
ATGCATGCTATAACACTGTT+TGG | + | chr5_3:12362200-12362219 | None:intergenic | 35.0% | |
TTATAGCATGCATGCTGTAT+AGG | - | chr5_3:12362207-12362226 | Msa0799240:intron | 35.0% | |
AACAAGACATACGACTAATC+AGG | - | chr5_3:12362639-12362658 | Msa0799240:intron | 35.0% | |
ACAAGACATACGACTAATCA+GGG | - | chr5_3:12362640-12362659 | Msa0799240:intron | 35.0% | |
GGCATAAATTTGAAAACCCA+GGG | + | chr5_3:12362705-12362724 | None:intergenic | 35.0% | |
GGTGCAACATTAAAACTTCA+GGG | + | chr5_3:12362758-12362777 | None:intergenic | 35.0% | |
AGGTGCAACATTAAAACTTC+AGG | + | chr5_3:12362759-12362778 | None:intergenic | 35.0% | |
GAATGAGAGAAGAACACATT+AGG | + | chr5_3:12362839-12362858 | None:intergenic | 35.0% | |
GTCGAAAGTAAAAAGCAACA+AGG | + | chr5_3:12362864-12362883 | None:intergenic | 35.0% | |
TCTAAGTCATGAGTTCAAGA+AGG | + | chr5_3:12363006-12363025 | None:intergenic | 35.0% | |
GTCCGAAGAGTAGATATTAT+TGG | - | chr5_3:12363992-12364011 | Msa0799240:intron | 35.0% | |
GGCCAATAATATCTACTCTT+CGG | + | chr5_3:12363997-12364016 | None:intergenic | 35.0% | |
ACTTCCACTTAATCTGACTA+TGG | - | chr5_3:12364066-12364085 | Msa0799240:intron | 35.0% | |
TTCTCCATAGTCAGATTAAG+TGG | + | chr5_3:12364073-12364092 | None:intergenic | 35.0% | |
GTTGCTCACAAAAATAAGGT+CGG | + | chr5_3:12364147-12364166 | None:intergenic | 35.0% | |
GTCTTTGTAGCTAATGACTA+AGG | + | chr5_3:12364229-12364248 | None:intergenic | 35.0% | |
GATACATATTTACAGGAAGC+TGG | - | chr5_3:12364554-12364573 | Msa0799240:intron | 35.0% | |
TTACAAGAGATAAAGAAGGC+TGG | - | chr5_3:12364591-12364610 | Msa0799240:intron | 35.0% | |
AGCGACCATGTGTTTATAAT+AGG | - | chr5_3:12364631-12364650 | Msa0799240:intron | 35.0% | |
AGGCACCTATTATAAACACA+TGG | + | chr5_3:12364639-12364658 | None:intergenic | 35.0% | |
CCTTAAGCAATTTCTTGCTT+CGG | - | chr5_3:12364656-12364675 | Msa0799240:intron | 35.0% | |
GTTTAACATTACCTCCATGT+TGG | + | chr5_3:12365354-12365373 | None:intergenic | 35.0% | |
TTGTCGTTCAACTAGGTAAT+TGG | - | chr5_3:12365472-12365491 | Msa0799240:intron | 35.0% | |
!!! | GGGTTTTGACTCTATCTTAA+GGG | + | chr5_3:12365717-12365736 | None:intergenic | 35.0% |
!!! | AGGGTTTTGACTCTATCTTA+AGG | + | chr5_3:12365718-12365737 | None:intergenic | 35.0% |
! | GATGAACCCTTCTTATTTGT+TGG | + | chr5_3:12365935-12365954 | None:intergenic | 35.0% |
!!! | TCATCCTCTTGTTTTCTCTA+TGG | + | chr5_3:12366029-12366048 | None:intergenic | 35.0% |
ATCAAAGCTTCAAAAGTCAG+AGG | + | chr5_3:12366059-12366078 | None:intergenic | 35.0% | |
TTCAGAAAGCTAATGGTACA+AGG | + | chr5_3:12366094-12366113 | None:intergenic | 35.0% | |
!!! | GCTTGTTTTTCAAGTTGGAT+CGG | + | chr5_3:12366205-12366224 | None:intergenic | 35.0% |
TTTCCTTTAAACATGGCTTG+CGG | + | chr5_3:12366244-12366263 | None:intergenic | 35.0% | |
ACAACTAAACGAACATTCCT+AGG | - | chr5_3:12366482-12366501 | Msa0799240:intron | 35.0% | |
! | CCTATTTGATGATATTTCCG+GGG | + | chr5_3:12366516-12366535 | None:intergenic | 35.0% |
AATCCCAAGAATCCATGATA+AGG | - | chr5_3:12366576-12366595 | Msa0799240:intron | 35.0% | |
CAAACAACTGCAAGACTAAT+GGG | + | chr5_3:12366718-12366737 | None:intergenic | 35.0% | |
ACAAACAACTGCAAGACTAA+TGG | + | chr5_3:12366719-12366738 | None:intergenic | 35.0% | |
AAATGTGGGGTTTATATTCG+GGG | + | chr5_3:12366817-12366836 | None:intergenic | 35.0% | |
GAAATGTGGGGTTTATATTC+GGG | + | chr5_3:12366818-12366837 | None:intergenic | 35.0% | |
! | GCTTGACCCATGTTTAAAAT+AGG | - | chr5_3:12367053-12367072 | Msa0799240:intron | 35.0% |
!!! | GACATGTATTTTGAAACGGA+TGG | + | chr5_3:12367100-12367119 | None:intergenic | 35.0% |
!! | CCACGACATGTATTTTGAAA+CGG | + | chr5_3:12367104-12367123 | None:intergenic | 35.0% |
GACGGTATATAAATCCTTGA+CGG | - | chr5_3:12367351-12367370 | Msa0799240:intron | 35.0% | |
!!! | CATTATTTTGACAACCGTCA+AGG | + | chr5_3:12367368-12367387 | None:intergenic | 35.0% |
TGCTTCTTACATGAACAGAA+AGG | - | chr5_3:12367416-12367435 | Msa0799240:intron | 35.0% | |
TGATGTTCACACATTTGAGA+AGG | - | chr5_3:12367670-12367689 | Msa0799240:intron | 35.0% | |
ATGGAAGAAGGATTGAGATA+AGG | + | chr5_3:12367892-12367911 | None:intergenic | 35.0% | |
CCAAAAAACGAAATGGAAGA+AGG | + | chr5_3:12367904-12367923 | None:intergenic | 35.0% | |
!!! | CCTTCTTCCATTTCGTTTTT+TGG | - | chr5_3:12367901-12367920 | Msa0799240:intron | 35.0% |
GTAAAAAGGACACCTATTCA+TGG | + | chr5_3:12367997-12368016 | None:intergenic | 35.0% | |
!!! | AATTTTGTGAGGTTTGCTGA+TGG | - | chr5_3:12368258-12368277 | Msa0799240:intron | 35.0% |
!!! | ATTTTGTGAGGTTTGCTGAT+GGG | - | chr5_3:12368259-12368278 | Msa0799240:intron | 35.0% |
GGAAAACATTCTGCATATGA+AGG | + | chr5_3:12368393-12368412 | None:intergenic | 35.0% | |
! | CATATGCAGAATGTTTTCCT+CGG | - | chr5_3:12368394-12368413 | Msa0799240:intron | 35.0% |
TGTTGTTGACACATTGCATA+AGG | + | chr5_3:12368527-12368546 | None:intergenic | 35.0% | |
CATATCCTTAATGAATGTCC+GGG | - | chr5_3:12368621-12368640 | Msa0799240:intron | 35.0% | |
ATATCCTTAATGAATGTCCG+GGG | - | chr5_3:12368622-12368641 | Msa0799240:intron | 35.0% | |
TTCGAGAACTCACACATAAA+TGG | + | chr5_3:12368704-12368723 | None:intergenic | 35.0% | |
!! | ATATTAGGAGGTGCCTAAAT+AGG | - | chr5_3:12368834-12368853 | Msa0799240:intron | 35.0% |
!! | TATTAGGAGGTGCCTAAATA+GGG | - | chr5_3:12368835-12368854 | Msa0799240:intron | 35.0% |
TATGTCGTGAAAAAAGCGAA+TGG | - | chr5_3:12369201-12369220 | Msa0799240:five_prime_UTR | 35.0% | |
ATGTCGTGAAAAAAGCGAAT+GGG | - | chr5_3:12369202-12369221 | Msa0799240:five_prime_UTR | 35.0% | |
AGATTCAATAGAGCTGGAAA+AGG | + | chr5_3:12369259-12369278 | None:intergenic | 35.0% | |
AATCTGAAAAATGCGGTTCA+AGG | - | chr5_3:12369274-12369293 | Msa0799240:intron | 35.0% | |
ACAATCAACCTGCATATTGT+AGG | + | chr5_3:12369347-12369366 | None:intergenic | 35.0% | |
!! | AGGTTGATTGTTTTCGTAGA+AGG | - | chr5_3:12369356-12369375 | Msa0799240:five_prime_UTR | 35.0% |
! | TGTTTTCGTAGAAGGATGAA+TGG | - | chr5_3:12369364-12369383 | Msa0799240:five_prime_UTR | 35.0% |
! | GGAAATGTTTGAAGTAGAAG+AGG | - | chr5_3:12369463-12369482 | Msa0799240:intron | 35.0% |
!! | GGTTGATAGAATTCATGAGT+GGG | + | chr5_3:12369543-12369562 | None:intergenic | 35.0% |
GGATACGATTTATAACTCTG+TGG | + | chr5_3:12369811-12369830 | None:intergenic | 35.0% | |
! | AACCCAGACAATGATGATTT+TGG | - | chr5_3:12369842-12369861 | Msa0799240:intron | 35.0% |
GTTAGAGATGAGGTTGAAAT+TGG | - | chr5_3:12369947-12369966 | Msa0799240:intron | 35.0% | |
! | TTCATGTTGTTTGGATAGCT+TGG | + | chr5_3:12370325-12370344 | None:intergenic | 35.0% |
!! | TATGTGTATGTTTGGTTCTG+CGG | + | chr5_3:12370465-12370484 | None:intergenic | 35.0% |
! | TCAATCACCTGGGAAAATTT+TGG | + | chr5_3:12370515-12370534 | None:intergenic | 35.0% |
! | GAATCCATCTCCATCTTTTA+TGG | - | chr5_3:12370876-12370895 | Msa0799240:intron | 35.0% |
! | ATCCATCTCCATCTTTTATG+GGG | - | chr5_3:12370878-12370897 | Msa0799240:intron | 35.0% |
TTTCTCATCCCCATAAAAGA+TGG | + | chr5_3:12370889-12370908 | None:intergenic | 35.0% | |
ACATTCCTAGAGAGAAATAG+AGG | + | chr5_3:12371523-12371542 | None:intergenic | 35.0% | |
AGGAAGTCATGAATACGATT+GGG | + | chr5_3:12371884-12371903 | None:intergenic | 35.0% | |
AAGGAAGTCATGAATACGAT+TGG | + | chr5_3:12371885-12371904 | None:intergenic | 35.0% | |
! | GATTAGTTGGACAATGAAGA+TGG | - | chr5_3:12372057-12372076 | Msa0799240:intron | 35.0% |
AGGTACAGTTATCAGATTCT+GGG | - | chr5_3:12372114-12372133 | Msa0799240:intron | 35.0% | |
AGGATTAAGGAAACTCAATG+TGG | - | chr5_3:12372369-12372388 | Msa0799240:intron | 35.0% | |
TTGTGGTTGGATTCAGTTAT+GGG | - | chr5_3:12360541-12360560 | Msa0799240:CDS | 35.0% | |
TTTGGCTATGACAGAATCTA+TGG | - | chr5_3:12372495-12372514 | Msa0799240:intron | 35.0% | |
ATGACAGAATCTATGGTTAG+TGG | - | chr5_3:12372502-12372521 | Msa0799240:intron | 35.0% | |
!! | AGTGGAGTATTGAAAGATGT+TGG | - | chr5_3:12372520-12372539 | Msa0799240:intron | 35.0% |
!! | GTGGAGTATTGAAAGATGTT+GGG | - | chr5_3:12372521-12372540 | Msa0799240:intron | 35.0% |
CTCAATCCTTCAATAGAAGA+TGG | + | chr5_3:12372574-12372593 | None:intergenic | 35.0% | |
CATCTTCTATTGAAGGATTG+AGG | - | chr5_3:12372572-12372591 | Msa0799240:intron | 35.0% | |
!! | ACAAGGTGTTGAATAAGCAT+TGG | + | chr5_3:12372720-12372739 | None:intergenic | 35.0% |
TGTAGGTGATGTTCTCAAAT+AGG | - | chr5_3:12372940-12372959 | Msa0799240:intron | 35.0% | |
CTATTAGAGGCTACAATCAA+TGG | - | chr5_3:12372978-12372997 | Msa0799240:intron | 35.0% | |
TGTACCGCATATATATTTCG+AGG | - | chr5_3:12373089-12373108 | Msa0799240:five_prime_UTR | 35.0% | |
AAAGATGTATTCTCTGCAGA+GGG | + | chr5_3:12373213-12373232 | None:intergenic | 35.0% | |
AAAAGATGTATTCTCTGCAG+AGG | + | chr5_3:12373214-12373233 | None:intergenic | 35.0% | |
! | TTCATATTTAGAGCAACCTC+TGG | + | chr5_3:12373265-12373284 | None:intergenic | 35.0% |
AGGCACCTATTGTAAATACA+TGG | + | chr5_3:12373470-12373489 | None:intergenic | 35.0% | |
! | GAATATGTTAAGGGTGTGTT+TGG | - | chr5_3:12373549-12373568 | Msa0799240:five_prime_UTR | 35.0% |
TGAACACGGTGAACGTAATT+TGG | - | chr5_3:12360163-12360182 | Msa0799240:three_prime_UTR | 40.0% | |
TACACAGTAGAGATAGAACC+AGG | - | chr5_3:12360228-12360247 | Msa0799240:three_prime_UTR | 40.0% | |
! | GACTTGGAAATGGTGTTAGA+AGG | + | chr5_3:12360276-12360295 | None:intergenic | 40.0% |
! | CCGGACTTAATTTTCTTTGG+TGG | - | chr5_3:12360429-12360448 | Msa0799240:intron | 40.0% |
GTTGTGGTTGGATTCAGTTA+TGG | - | chr5_3:12360540-12360559 | Msa0799240:CDS | 40.0% | |
! | TGGATTCAGTTATGGTGGAA+TGG | - | chr5_3:12360548-12360567 | Msa0799240:CDS | 40.0% |
! | ATTCAGTTATGGTGGAATGG+TGG | - | chr5_3:12360551-12360570 | Msa0799240:CDS | 40.0% |
! | TGGAATGGTGGCGTTTAAAA+TGG | - | chr5_3:12360563-12360582 | Msa0799240:intron | 40.0% |
TGCTGGATTCTCTTCTTGTT+CGG | - | chr5_3:12360677-12360696 | Msa0799240:intron | 40.0% | |
TTCACTCCTTCAACAGAAGA+TGG | + | chr5_3:12360714-12360733 | None:intergenic | 40.0% | |
GTGAAGACACTTCTTTCTGT+TGG | - | chr5_3:12360729-12360748 | Msa0799240:intron | 40.0% | |
AATACGGATGGGAATAGGTT+AGG | - | chr5_3:12361144-12361163 | Msa0799240:intron | 40.0% | |
CTTAAATAGGTCGGCCTAAT+AGG | - | chr5_3:12361601-12361620 | Msa0799240:CDS | 40.0% | |
AAACGCCTCTTAAGCCTATT+AGG | + | chr5_3:12361618-12361637 | None:intergenic | 40.0% | |
ATCTAGTCGTATGTAGGGAT+GGG | + | chr5_3:12361775-12361794 | None:intergenic | 40.0% | |
AATCTAGTCGTATGTAGGGA+TGG | + | chr5_3:12361776-12361795 | None:intergenic | 40.0% | |
CTAACAGATGAATTTGACGG+AGG | - | chr5_3:12361965-12361984 | Msa0799240:intron | 40.0% | |
AACAGATGAATTTGACGGAG+GGG | - | chr5_3:12361967-12361986 | Msa0799240:intron | 40.0% | |
GACGAAACTTACAATTTCGG+AGG | - | chr5_3:12362056-12362075 | Msa0799240:intron | 40.0% | |
! | TCACACTATAAGAGCATGAG+TGG | - | chr5_3:12362280-12362299 | Msa0799240:intron | 40.0% |
! | CACACTATAAGAGCATGAGT+GGG | - | chr5_3:12362281-12362300 | Msa0799240:intron | 40.0% |
! | ACACTATAAGAGCATGAGTG+GGG | - | chr5_3:12362282-12362301 | Msa0799240:intron | 40.0% |
TTATTCTCACCCTCACTCTA+TGG | + | chr5_3:12362377-12362396 | None:intergenic | 40.0% | |
CAAGACATACGACTAATCAG+GGG | - | chr5_3:12362641-12362660 | Msa0799240:intron | 40.0% | |
GGGCATAAATTTGAAAACCC+AGG | + | chr5_3:12362706-12362725 | None:intergenic | 40.0% | |
GTTCAAGAAGGTAGAAGACT+AGG | + | chr5_3:12362994-12363013 | None:intergenic | 40.0% | |
AACTGAATGGTGAAGTGAAG+TGG | + | chr5_3:12363048-12363067 | None:intergenic | 40.0% | |
GTAACCGTCCAAATTACTAC+AGG | - | chr5_3:12363247-12363266 | Msa0799240:intron | 40.0% | |
TATTTAGCGGAAATCAAGGG+AGG | + | chr5_3:12363574-12363593 | None:intergenic | 40.0% | |
! | ATTAGTGTCAAAGGAGTGCA+TGG | - | chr5_3:12363768-12363787 | Msa0799240:intron | 40.0% |
! | GCATGGATTTTCAACTCTCA+CGG | - | chr5_3:12363785-12363804 | Msa0799240:intron | 40.0% |
TGCAGGTGATGTTCTCAAAT+CGG | - | chr5_3:12364178-12364197 | Msa0799240:intron | 40.0% | |
! | CAACATCCCAAAATTTTCGC+AGG | - | chr5_3:12364251-12364270 | Msa0799240:intron | 40.0% |
GAAGATGTATTCGCTGCAAA+AGG | + | chr5_3:12364396-12364415 | None:intergenic | 40.0% | |
! | AGACAAACTTTTCACACCAG+AGG | - | chr5_3:12364429-12364448 | Msa0799240:intron | 40.0% |
! | TTCATGTTTTGTGCAACCTC+TGG | + | chr5_3:12364448-12364467 | None:intergenic | 40.0% |
CCGAAGCAAGAAATTGCTTA+AGG | + | chr5_3:12364659-12364678 | None:intergenic | 40.0% | |
!! | ATTGTGGCTTTAGTCCAACA+TGG | - | chr5_3:12365337-12365356 | Msa0799240:intron | 40.0% |
ACAGAGATTGTCGTTCAACT+AGG | - | chr5_3:12365465-12365484 | Msa0799240:intron | 40.0% | |
TCGTTCAACTAGGTAATTGG+TGG | - | chr5_3:12365475-12365494 | Msa0799240:intron | 40.0% | |
TGTAACTGGTTGAATTGAGG+CGG | + | chr5_3:12365683-12365702 | None:intergenic | 40.0% | |
!! | TTAGTATTGTCTGGTTCGGA+CGG | - | chr5_3:12365789-12365808 | Msa0799240:intron | 40.0% |
AAGCTAATGGTACAAGGCAA+GGG | + | chr5_3:12366088-12366107 | None:intergenic | 40.0% | |
AAAGCTAATGGTACAAGGCA+AGG | + | chr5_3:12366089-12366108 | None:intergenic | 40.0% | |
!!! | TGTTTTTCAAGTTGGATCGG+TGG | + | chr5_3:12366202-12366221 | None:intergenic | 40.0% |
! | TTCCTTTAAACATGGCTTGC+GGG | + | chr5_3:12366243-12366262 | None:intergenic | 40.0% |
GGTACAAAAAAGAGGGCAAA+AGG | - | chr5_3:12366443-12366462 | Msa0799240:intron | 40.0% | |
CCCCGGAAATATCATCAAAT+AGG | - | chr5_3:12366513-12366532 | Msa0799240:intron | 40.0% | |
! | CAGCCTTATCATGGATTCTT+GGG | + | chr5_3:12366582-12366601 | None:intergenic | 40.0% |
! | TCAGCCTTATCATGGATTCT+TGG | + | chr5_3:12366583-12366602 | None:intergenic | 40.0% |
! | TGCTAACTTCAGCCTTATCA+TGG | + | chr5_3:12366591-12366610 | None:intergenic | 40.0% |
ATTCATCATACCTGGTGAGA+GGG | + | chr5_3:12366635-12366654 | None:intergenic | 40.0% | |
ACGTTGAGATTCATCATACC+TGG | + | chr5_3:12366643-12366662 | None:intergenic | 40.0% | |
GTTTCATATCTCTGTGTGGA+AGG | + | chr5_3:12366770-12366789 | None:intergenic | 40.0% | |
TGGAGTTTCATATCTCTGTG+TGG | + | chr5_3:12366774-12366793 | None:intergenic | 40.0% | |
AAAGGATTTGTGCGCAAGAT+TGG | + | chr5_3:12366863-12366882 | None:intergenic | 40.0% | |
ACTAATGGCAAATGGCTCAA+AGG | + | chr5_3:12366881-12366900 | None:intergenic | 40.0% | |
ATGTCTATTCGGGACACTAA+TGG | + | chr5_3:12366896-12366915 | None:intergenic | 40.0% | |
CCGTTTCAAAATACATGTCG+TGG | - | chr5_3:12367101-12367120 | Msa0799240:intron | 40.0% | |
! | ATGTATTGACATGCATGCAG+TGG | + | chr5_3:12367131-12367150 | None:intergenic | 40.0% |
TAGCTAGCCCTTAAATCTTG+AGG | + | chr5_3:12367463-12367482 | None:intergenic | 40.0% | |
AAGATATCAACGAGCTTGAG+TGG | - | chr5_3:12367556-12367575 | Msa0799240:intron | 40.0% | |
! | AAAATACGTTTTTGCCCCCT+CGG | - | chr5_3:12367708-12367727 | Msa0799240:intron | 40.0% |
! | CAGTCGGATTTTGAATTCCT+CGG | + | chr5_3:12367744-12367763 | None:intergenic | 40.0% |
TTAACTACCGAGGAATTCCT+CGG | + | chr5_3:12367777-12367796 | None:intergenic | 40.0% | |
TCATGGATCTGTTAGGAAGA+AGG | + | chr5_3:12367958-12367977 | None:intergenic | 40.0% | |
GAGTTATCAATTGGGTGTCA+TGG | + | chr5_3:12367975-12367994 | None:intergenic | 40.0% | |
TTAACTACCGAGGAAAACCT+CGG | + | chr5_3:12368430-12368449 | None:intergenic | 40.0% | |
! | AAAATACGATTTTGCCCCCT+CGG | + | chr5_3:12368489-12368508 | None:intergenic | 40.0% |
TATCCTTAATGAATGTCCGG+GGG | - | chr5_3:12368623-12368642 | Msa0799240:intron | 40.0% | |
ATGCTAAAGGGAAATGTCAC+AGG | - | chr5_3:12369078-12369097 | Msa0799240:exon | 40.0% | |
TGCTAAAGGGAAATGTCACA+GGG | - | chr5_3:12369079-12369098 | Msa0799240:five_prime_UTR | 40.0% | |
TCAATAGAGCTGGAAAAGGA+TGG | + | chr5_3:12369255-12369274 | None:intergenic | 40.0% | |
CTTCAAAGCCTACAATATGC+AGG | - | chr5_3:12369336-12369355 | Msa0799240:five_prime_UTR | 40.0% | |
TTCGTAGAAGGATGAATGGA+AGG | - | chr5_3:12369368-12369387 | Msa0799240:five_prime_UTR | 40.0% | |
GAAGGATGAATGGAAGGATA+AGG | - | chr5_3:12369374-12369393 | Msa0799240:five_prime_UTR | 40.0% | |
GATGAATGGAAGGATAAGGA+TGG | - | chr5_3:12369378-12369397 | Msa0799240:five_prime_UTR | 40.0% | |
AAGGATAAGGATGGCTGAAT+GGG | - | chr5_3:12369387-12369406 | Msa0799240:intron | 40.0% | |
AGAAGAGGCAAACAGTTAGT+TGG | - | chr5_3:12369478-12369497 | Msa0799240:intron | 40.0% | |
!! | CGGTTGATAGAATTCATGAG+TGG | + | chr5_3:12369544-12369563 | None:intergenic | 40.0% |
AGGTTCGTGATATATTCACG+AGG | - | chr5_3:12369698-12369717 | Msa0799240:intron | 40.0% | |
TGTCTGGGTTGTTAGATTGT+AGG | + | chr5_3:12369832-12369851 | None:intergenic | 40.0% | |
CTTTCTCTAGGTTAGAGATG+AGG | - | chr5_3:12369937-12369956 | Msa0799240:intron | 40.0% | |
TATATGTACTGTACACCCTC+CGG | - | chr5_3:12370623-12370642 | Msa0799240:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr5_3:12370745-12370764 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr5_3:12370744-12370763 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr5_3:12370744-12370763 | Msa0799240:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr5_3:12370745-12370764 | Msa0799240:intron | 40.0% | |
! | AAAAGATGGATTCGCTGCAA+TGG | + | chr5_3:12370839-12370858 | None:intergenic | 40.0% |
ATCCCCATAAAAGATGGAGA+TGG | + | chr5_3:12370883-12370902 | None:intergenic | 40.0% | |
GATGCATATATCAGGAAGCT+AGG | - | chr5_3:12371038-12371057 | Msa0799240:intron | 40.0% | |
! | AATAAAGAAGGCTGGTCACT+TGG | - | chr5_3:12371082-12371101 | Msa0799240:intron | 40.0% |
! | TCCTTCCTCTATTTCTCTCT+AGG | - | chr5_3:12371515-12371534 | Msa0799240:intron | 40.0% |
TCCTAGAGAGAAATAGAGGA+AGG | + | chr5_3:12371519-12371538 | None:intergenic | 40.0% | |
TGACAAATTGGCTAACCTCA+TGG | + | chr5_3:12371614-12371633 | None:intergenic | 40.0% | |
! | TGAGGTTAGCCAATTTGTCA+AGG | - | chr5_3:12371614-12371633 | Msa0799240:intron | 40.0% |
TCATAGCCACCTTGACAAAT+TGG | + | chr5_3:12371626-12371645 | None:intergenic | 40.0% | |
AATTATGACACATGCATGCC+TGG | - | chr5_3:12371846-12371865 | Msa0799240:intron | 40.0% | |
AATACGATTGGGACCCAATA+TGG | + | chr5_3:12371873-12371892 | None:intergenic | 40.0% | |
TGAACACGGTGACCATTATT+TGG | - | chr5_3:12372029-12372048 | Msa0799240:intron | 40.0% | |
AGTTGGACAATGAAGATGGT+TGG | - | chr5_3:12372061-12372080 | Msa0799240:intron | 40.0% | |
CAGAATCTGATAACTGTACC+TGG | + | chr5_3:12372115-12372134 | None:intergenic | 40.0% | |
CAGGTACAGTTATCAGATTC+TGG | - | chr5_3:12372113-12372132 | Msa0799240:intron | 40.0% | |
!! | TGCTTTGAAGTGGTTTCAGA+TGG | + | chr5_3:12372142-12372161 | None:intergenic | 40.0% |
AACTTGGCAGTTCCAAATCA+TGG | - | chr5_3:12372237-12372256 | Msa0799240:intron | 40.0% | |
! | CCAGACTTAATTTTCTTCGG+CGG | - | chr5_3:12372289-12372308 | Msa0799240:intron | 40.0% |
!!! | TTTTCAAGTCGAGTGTTTGG+TGG | - | chr5_3:12372345-12372364 | Msa0799240:intron | 40.0% |
CAATGTGGAGAAATGTGTTG+TGG | - | chr5_3:12372384-12372403 | Msa0799240:intron | 40.0% | |
GTTGTGGTTGGATTCAGTTA+TGG | - | chr5_3:12360540-12360559 | Msa0799240:CDS | 40.0% | |
TGTGGTTGGATTCAGTTATG+GGG | - | chr5_3:12360542-12360561 | Msa0799240:CDS | 40.0% | |
!!! | GGTTGTTACTGGTTCAGTTT+TGG | - | chr5_3:12372477-12372496 | Msa0799240:intron | 40.0% |
GGTGATGTTCTCAAATAGGA+AGG | - | chr5_3:12372944-12372963 | Msa0799240:intron | 40.0% | |
ATACATATGACAGGAGGCTA+GGG | - | chr5_3:12373387-12373406 | Msa0799240:five_prime_UTR | 40.0% | |
AGGCATGTTATGTTGGACTA+AGG | - | chr5_3:12373656-12373675 | Msa0799240:five_prime_UTR | 40.0% | |
GTCTAACATTACCTCCATCT+TGG | + | chr5_3:12373686-12373705 | None:intergenic | 40.0% | |
GGTGAACGTAATTTGGACAC+TGG | - | chr5_3:12360170-12360189 | Msa0799240:three_prime_UTR | 45.0% | |
! | GGTTAGTTGGGTAGTGAAGA+TGG | - | chr5_3:12360191-12360210 | Msa0799240:three_prime_UTR | 45.0% |
GTGGGTTTGGATATGGGTTT+GGG | + | chr5_3:12360309-12360328 | None:intergenic | 45.0% | |
GTGGAGAAATGTGTTGTGGT+TGG | - | chr5_3:12360528-12360547 | Msa0799240:CDS | 45.0% | |
GTGGTTGGATTCAGTTATGG+TGG | - | chr5_3:12360543-12360562 | Msa0799240:CDS | 45.0% | |
AACTGCACCACTTACTACCA+CGG | + | chr5_3:12360616-12360635 | None:intergenic | 45.0% | |
! | GGTAGTAAGTGGTGCAGTTT+TGG | - | chr5_3:12360617-12360636 | Msa0799240:intron | 45.0% |
!!! | TGGTGCAGTTTTGGCTGTAA+AGG | - | chr5_3:12360626-12360645 | Msa0799240:intron | 45.0% |
AGTAAGGCAGTTGAAGATGC+TGG | - | chr5_3:12360660-12360679 | Msa0799240:intron | 45.0% | |
TTGATGAGACGGTTGGGAAA+CGG | + | chr5_3:12360771-12360790 | None:intergenic | 45.0% | |
AAGTCCTTGATGAGACGGTT+GGG | + | chr5_3:12360777-12360796 | None:intergenic | 45.0% | |
AAAGTCCTTGATGAGACGGT+TGG | + | chr5_3:12360778-12360797 | None:intergenic | 45.0% | |
AAATATGGCAGGCCAGACTT+AGG | + | chr5_3:12361190-12361209 | None:intergenic | 45.0% | |
TAAAGCCTAAGTCTGGTCTG+CGG | - | chr5_3:12361213-12361232 | Msa0799240:intron | 45.0% | |
TAGGCTCAGGCCTAAAAAGT+AGG | + | chr5_3:12361250-12361269 | None:intergenic | 45.0% | |
GCTTTCAGAAAGTTAGGCTC+AGG | + | chr5_3:12361263-12361282 | None:intergenic | 45.0% | |
! | AGGCTTTTAAACAGGCTAGC+AGG | + | chr5_3:12361295-12361314 | None:intergenic | 45.0% |
TCGTATGTAGGGATGGGAAT+AGG | + | chr5_3:12361769-12361788 | None:intergenic | 45.0% | |
GTTTGATGTGAGAGGGTCTT+GGG | + | chr5_3:12362782-12362801 | None:intergenic | 45.0% | |
CGTCATGGTTTGATGTGAGA+GGG | + | chr5_3:12362789-12362808 | None:intergenic | 45.0% | |
GGTGATGTTCTCAAATCGGA+AGG | - | chr5_3:12364182-12364201 | Msa0799240:intron | 45.0% | |
TGCAGCGAATACATCTTCTG+TGG | - | chr5_3:12364398-12364417 | Msa0799240:intron | 45.0% | |
GCAGCGAATACATCTTCTGT+GGG | - | chr5_3:12364399-12364418 | Msa0799240:intron | 45.0% | |
CAGCGAATACATCTTCTGTG+GGG | - | chr5_3:12364400-12364419 | Msa0799240:intron | 45.0% | |
GAATATGCCAACGGTGTCTT+TGG | - | chr5_3:12364754-12364773 | Msa0799240:intron | 45.0% | |
GAACTTACCAAAGACACCGT+TGG | + | chr5_3:12364764-12364783 | None:intergenic | 45.0% | |
ATGGCTCCGTGATGTATAAG+TGG | - | chr5_3:12365640-12365659 | Msa0799240:intron | 45.0% | |
AGGAGACTATTGAGCTCACT+AGG | - | chr5_3:12366533-12366552 | Msa0799240:intron | 45.0% | |
AGACTATTGAGCTCACTAGG+AGG | - | chr5_3:12366536-12366555 | Msa0799240:intron | 45.0% | |
GACTATTGAGCTCACTAGGA+GGG | - | chr5_3:12366537-12366556 | Msa0799240:intron | 45.0% | |
ACTATTGAGCTCACTAGGAG+GGG | - | chr5_3:12366538-12366557 | Msa0799240:intron | 45.0% | |
!! | AGGGCAATAGAAGTGCTGAT+TGG | + | chr5_3:12366616-12366635 | None:intergenic | 45.0% |
GATTCATCATACCTGGTGAG+AGG | + | chr5_3:12366636-12366655 | None:intergenic | 45.0% | |
TGCTCTGCATGCAGAAATGT+GGG | + | chr5_3:12366831-12366850 | None:intergenic | 45.0% | |
ATGCTCTGCATGCAGAAATG+TGG | + | chr5_3:12366832-12366851 | None:intergenic | 45.0% | |
TTCGGGACACTAATGGCAAA+TGG | + | chr5_3:12366889-12366908 | None:intergenic | 45.0% | |
GACATGGAGACAACACACAT+GGG | - | chr5_3:12367391-12367410 | Msa0799240:intron | 45.0% | |
ACATGGAGACAACACACATG+GGG | - | chr5_3:12367392-12367411 | Msa0799240:intron | 45.0% | |
TTAACTGCCGAGGAATTCCT+CGG | - | chr5_3:12367767-12367786 | Msa0799240:intron | 45.0% | |
GATCTGTTAGGAAGAAGGTG+TGG | + | chr5_3:12367953-12367972 | None:intergenic | 45.0% | |
! | TTGGGTGTCATGGATCTGTT+AGG | + | chr5_3:12367965-12367984 | None:intergenic | 45.0% |
! | TTAACTGCCGAGGTTTTCCT+CGG | - | chr5_3:12368420-12368439 | Msa0799240:intron | 45.0% |
! | CAGCCGGATTTTGAATTCCT+CGG | - | chr5_3:12368453-12368472 | Msa0799240:intron | 45.0% |
CTGCCGAGGAATTCAAAATC+CGG | + | chr5_3:12367738-12367757 | None:intergenic | 45.0% | |
ATATACACGGATCACCGCAA+TGG | - | chr5_3:12368807-12368826 | Msa0799240:intron | 45.0% | |
TATACACGGATCACCGCAAT+GGG | - | chr5_3:12368808-12368827 | Msa0799240:intron | 45.0% | |
AGATGGGTCCTTCCCTATTT+AGG | + | chr5_3:12368850-12368869 | None:intergenic | 45.0% | |
GCTAAAGGGAAATGTCACAG+GGG | - | chr5_3:12369080-12369099 | Msa0799240:five_prime_UTR | 45.0% | |
TCGTGAAAAAAGCGAATGGG+TGG | - | chr5_3:12369205-12369224 | Msa0799240:five_prime_UTR | 45.0% | |
AAAAAGCGAATGGGTGGCAA+TGG | - | chr5_3:12369211-12369230 | Msa0799240:five_prime_UTR | 45.0% | |
AAAAGCGAATGGGTGGCAAT+GGG | - | chr5_3:12369212-12369231 | Msa0799240:five_prime_UTR | 45.0% | |
AATGCGGTTCAAGGATGAGA+TGG | - | chr5_3:12369283-12369302 | Msa0799240:intron | 45.0% | |
GAAGGATAAGGATGGCTGAA+TGG | - | chr5_3:12369386-12369405 | Msa0799240:intron | 45.0% | |
CCTTTGGCATAACGTAGGAA+CGG | + | chr5_3:12369564-12369583 | None:intergenic | 45.0% | |
CGTTCCTACGTTATGCCAAA+GGG | - | chr5_3:12369562-12369581 | Msa0799240:five_prime_UTR | 45.0% | |
TCTTCCCTTTGGCATAACGT+AGG | + | chr5_3:12369569-12369588 | None:intergenic | 45.0% | |
ATGCCAAAGGGAAGATCCAA+CGG | - | chr5_3:12369574-12369593 | Msa0799240:five_prime_UTR | 45.0% | |
!! | AGAAAGAGAGAGAGCGTTGA+AGG | + | chr5_3:12369923-12369942 | None:intergenic | 45.0% |
AACGCTCTCTCTCTTTCTCT+AGG | - | chr5_3:12369925-12369944 | Msa0799240:intron | 45.0% | |
! | GGAGGGTGTACAGTACATAT+AGG | + | chr5_3:12370624-12370643 | None:intergenic | 45.0% |
! | GGTTAGCCAATTTGTCAAGG+TGG | - | chr5_3:12371617-12371636 | Msa0799240:intron | 45.0% |
ATGCATGCCTGGTCCATATT+GGG | - | chr5_3:12371857-12371876 | Msa0799240:intron | 45.0% | |
GAGAAAGCTAGTGCAATCAC+AGG | - | chr5_3:12371992-12372011 | Msa0799240:intron | 45.0% | |
TGGTGTGAAGCTTTGCACAA+TGG | - | chr5_3:12372081-12372100 | Msa0799240:intron | 45.0% | |
CCGCCGAAGAAAATTAAGTC+TGG | + | chr5_3:12372292-12372311 | None:intergenic | 45.0% | |
TGAAAAGCCAGTGATCGATC+CGG | + | chr5_3:12372331-12372350 | None:intergenic | 45.0% | |
!!! | GGCTTTTCAAGTCGAGTGTT+TGG | - | chr5_3:12372342-12372361 | Msa0799240:intron | 45.0% |
! | AGTGTTTGGTGGCAGGATTA+AGG | - | chr5_3:12372356-12372375 | Msa0799240:intron | 45.0% |
GTGGAGAAATGTGTTGTGGT+TGG | - | chr5_3:12360528-12360547 | Msa0799240:CDS | 45.0% | |
GTGGTTGGATTCAGTTATGG+GGG | - | chr5_3:12360543-12360562 | Msa0799240:CDS | 45.0% | |
TGGATTCAGTTATGGGGGAA+TGG | - | chr5_3:12372408-12372427 | Msa0799240:intron | 45.0% | |
ATTCAGTTATGGGGGAATGG+TGG | - | chr5_3:12372411-12372430 | Msa0799240:intron | 45.0% | |
! | GGGAATGGTGGCGTTTAAAA+TGG | - | chr5_3:12372423-12372442 | Msa0799240:intron | 45.0% |
GGCTGAGATGTATTGTGAGT+TGG | - | chr5_3:12372444-12372463 | Msa0799240:intron | 45.0% | |
!! | TTGTGAGTTGGTTCAAGCTG+TGG | - | chr5_3:12372456-12372475 | Msa0799240:intron | 45.0% |
GTTCAAGCTGTGGTTGTTAC+TGG | - | chr5_3:12372466-12372485 | Msa0799240:intron | 45.0% | |
TTGAGGAGACTTCTCTCTGT+TGG | - | chr5_3:12372589-12372608 | Msa0799240:intron | 45.0% | |
TTCTCAAATAGGAAGGAGCG+AGG | - | chr5_3:12372951-12372970 | Msa0799240:intron | 45.0% | |
GATACATATGACAGGAGGCT+AGG | - | chr5_3:12373386-12373405 | Msa0799240:five_prime_UTR | 45.0% | |
! | TGCTGGTCATTTGGCTCATT+TGG | - | chr5_3:12373439-12373458 | Msa0799240:five_prime_UTR | 45.0% |
! | GAGAGTGCAATTGAGCACTA+AGG | - | chr5_3:12373603-12373622 | Msa0799240:five_prime_UTR | 45.0% |
TGGACTAAGGTTGTCCAAGA+TGG | - | chr5_3:12373669-12373688 | Msa0799240:five_prime_UTR | 45.0% | |
ACTAAGGTTGTCCAAGATGG+AGG | - | chr5_3:12373672-12373691 | Msa0799240:five_prime_UTR | 45.0% | |
!! | TTTATGTATATATTATAATA+AGG | - | chr5_3:12363462-12363481 | Msa0799240:intron | 5.0% |
!! | TTATGTATATATTATAATAA+GGG | - | chr5_3:12363463-12363482 | Msa0799240:intron | 5.0% |
!!! | ACTTTATTATTATTTTTTAT+GGG | - | chr5_3:12364299-12364318 | Msa0799240:intron | 5.0% |
!! | TGTATAATTAAATATATTAA+TGG | + | chr5_3:12367162-12367181 | None:intergenic | 5.0% |
AGTTGGGTAGTGAAGATGGC+AGG | - | chr5_3:12360195-12360214 | Msa0799240:three_prime_UTR | 50.0% | |
CGTGGGTTTGGATATGGGTT+TGG | + | chr5_3:12360310-12360329 | None:intergenic | 50.0% | |
GGCTTCGTGGGTTTGGATAT+GGG | + | chr5_3:12360315-12360334 | None:intergenic | 50.0% | |
TGGCTTCGTGGGTTTGGATA+TGG | + | chr5_3:12360316-12360335 | None:intergenic | 50.0% | |
!! | AGAACCACTACTGGCTTCGT+GGG | + | chr5_3:12360327-12360346 | None:intergenic | 50.0% |
TGGCTCAACCACCGATAAGA+CGG | - | chr5_3:12360449-12360468 | Msa0799240:intron | 50.0% | |
CAATGACCGGTCCGTCTTAT+CGG | + | chr5_3:12360463-12360482 | None:intergenic | 50.0% | |
CGGCTTGAAAAGCCAATGAC+CGG | + | chr5_3:12360476-12360495 | None:intergenic | 50.0% | |
!! | TTTTCAAGCCGAGTGCTTGG+CGG | - | chr5_3:12360485-12360504 | Msa0799240:intron | 50.0% |
!! | GGCTGAGATGTATAGTGGGT+TGG | - | chr5_3:12360584-12360603 | Msa0799240:intron | 50.0% |
GTTCAAGCCGTGGTAGTAAG+TGG | - | chr5_3:12360606-12360625 | Msa0799240:intron | 50.0% | |
GTTTCCCAACCGTCTCATCA+AGG | - | chr5_3:12360770-12360789 | Msa0799240:CDS | 50.0% | |
GGCTTTGCAAAGCCTAAGTC+TGG | - | chr5_3:12361175-12361194 | Msa0799240:intron | 50.0% | |
GTCGGCCTAATAGGCTTAAG+AGG | - | chr5_3:12361610-12361629 | Msa0799240:CDS | 50.0% | |
!!! | GGCTTAAGAGGCGTTTTGAG+AGG | - | chr5_3:12361622-12361641 | Msa0799240:CDS | 50.0% |
!!! | GTTTTGAGAGGCATGAGGTC+TGG | - | chr5_3:12361634-12361653 | Msa0799240:CDS | 50.0% |
TGTAGGGATGGGAATAGGTC+AGG | + | chr5_3:12361764-12361783 | None:intergenic | 50.0% | |
! | AGGCTAGTAGTTTGCAGTGC+AGG | - | chr5_3:12362227-12362246 | Msa0799240:intron | 50.0% |
GACATACGACTAATCAGGGG+CGG | - | chr5_3:12362644-12362663 | Msa0799240:intron | 50.0% | |
GGTTTGATGTGAGAGGGTCT+TGG | + | chr5_3:12362783-12362802 | None:intergenic | 50.0% | |
GCGTCATGGTTTGATGTGAG+AGG | + | chr5_3:12362790-12362809 | None:intergenic | 50.0% | |
GCGGAAATCAAGGGAGGTAA+TGG | + | chr5_3:12363568-12363587 | None:intergenic | 50.0% | |
TTAGTCACAGTGGCGTATCC+AGG | + | chr5_3:12363745-12363764 | None:intergenic | 50.0% | |
! | GATAAAGAAGGCTGGCCACT+TGG | - | chr5_3:12364599-12364618 | Msa0799240:intron | 50.0% |
GTCGCTCAATATGAGCCAAG+TGG | + | chr5_3:12364617-12364636 | None:intergenic | 50.0% | |
!! | GTGGCTTTAGTCCAACATGG+AGG | - | chr5_3:12365340-12365359 | Msa0799240:intron | 50.0% |
TGCCCGCAAGCCATGTTTAA+AGG | - | chr5_3:12366238-12366257 | Msa0799240:intron | 50.0% | |
ACTTCTATTGCCCTCTCACC+AGG | - | chr5_3:12366622-12366641 | Msa0799240:intron | 50.0% | |
TGATACGCCGCATCAACGAA+GGG | - | chr5_3:12366687-12366706 | Msa0799240:intron | 50.0% | |
GTGGGGTTTATATTCGGGGT+TGG | + | chr5_3:12366813-12366832 | None:intergenic | 50.0% | |
GCTCTGCATGCAGAAATGTG+GGG | + | chr5_3:12366830-12366849 | None:intergenic | 50.0% | |
CGACATGGAGACAACACACA+TGG | - | chr5_3:12367390-12367409 | Msa0799240:intron | 50.0% | |
GCGGTGATCCGTGTATATAG+AGG | + | chr5_3:12368805-12368824 | None:intergenic | 50.0% | |
ATACACGGATCACCGCAATG+GGG | - | chr5_3:12368809-12368828 | Msa0799240:intron | 50.0% | |
CTCCTAATATCGCCCCATTG+CGG | + | chr5_3:12368824-12368843 | None:intergenic | 50.0% | |
!! | AGGAGGTGCCTAAATAGGGA+AGG | - | chr5_3:12368839-12368858 | Msa0799240:intron | 50.0% |
AAAGCGAATGGGTGGCAATG+GGG | - | chr5_3:12369213-12369232 | Msa0799240:intron | 50.0% | |
CCGTTCCTACGTTATGCCAA+AGG | - | chr5_3:12369561-12369580 | Msa0799240:five_prime_UTR | 50.0% | |
TCACCGTTGGATCTTCCCTT+TGG | + | chr5_3:12369580-12369599 | None:intergenic | 50.0% | |
!! | GTGTATGTTTGGTTCTGCGG+TGG | + | chr5_3:12370462-12370481 | None:intergenic | 50.0% |
! | GGCTGGTCACTTGGTTAAAC+TGG | - | chr5_3:12371091-12371110 | Msa0799240:intron | 50.0% |
!! | GTGAATATAATGGGCCGTGC+TGG | + | chr5_3:12371651-12371670 | None:intergenic | 50.0% |
CATGCATGCCTGGTCCATAT+TGG | - | chr5_3:12371856-12371875 | Msa0799240:intron | 50.0% | |
ATTGGGACCCAATATGGACC+AGG | + | chr5_3:12371867-12371886 | None:intergenic | 50.0% | |
TGCACAATGGAGATAGAGCC+AGG | - | chr5_3:12372094-12372113 | Msa0799240:intron | 50.0% | |
!! | CTCGGGTTTGTGCTTTGAAG+TGG | + | chr5_3:12372152-12372171 | None:intergenic | 50.0% |
!!! | AGGGGTTTTGAGATGGACTC+GGG | + | chr5_3:12372169-12372188 | None:intergenic | 50.0% |
!!! | GAGGGGTTTTGAGATGGACT+CGG | + | chr5_3:12372170-12372189 | None:intergenic | 50.0% |
!!! | TGGCTTGAGGGGTTTTGAGA+TGG | + | chr5_3:12372176-12372195 | None:intergenic | 50.0% |
CGGCTCAATCACTGATAAGC+CGG | - | chr5_3:12372309-12372328 | Msa0799240:intron | 50.0% | |
TGATAAGCCGGATCGATCAC+TGG | - | chr5_3:12372321-12372340 | Msa0799240:intron | 50.0% | |
! | TGAGCATCGTTGCTGACTGT+AGG | - | chr5_3:12372923-12372942 | Msa0799240:intron | 50.0% |
!! | CACTACTGGCTTCGTGGGTT+TGG | + | chr5_3:12360322-12360341 | None:intergenic | 55.0% |
CAAACCCACGAAGCCAGTAG+TGG | - | chr5_3:12360320-12360339 | Msa0799240:CDS | 55.0% | |
!! | GAGAACCACTACTGGCTTCG+TGG | + | chr5_3:12360328-12360347 | None:intergenic | 55.0% |
CCAGTAGTGGTTCTCCTCCA+CGG | - | chr5_3:12360333-12360352 | Msa0799240:CDS | 55.0% | |
!! | GCGGTGATGGACTAGCTACT+TGG | - | chr5_3:12360361-12360380 | Msa0799240:CDS | 55.0% |
CAACCACCGATAAGACGGAC+CGG | - | chr5_3:12360454-12360473 | Msa0799240:intron | 55.0% | |
CGATAAGACGGACCGGTCAT+TGG | - | chr5_3:12360461-12360480 | Msa0799240:intron | 55.0% | |
!! | GGCTTTTCAAGCCGAGTGCT+TGG | - | chr5_3:12360482-12360501 | Msa0799240:intron | 55.0% |
GCGGCGGGGTTAAAGAAACT+CGG | - | chr5_3:12360504-12360523 | Msa0799240:intron | 55.0% | |
CGGCGGGGTTAAAGAAACTC+GGG | - | chr5_3:12360505-12360524 | Msa0799240:intron | 55.0% | |
GGCGGGGTTAAAGAAACTCG+GGG | - | chr5_3:12360506-12360525 | Msa0799240:intron | 55.0% | |
GGGGTTAAAGAAACTCGGGG+TGG | - | chr5_3:12360509-12360528 | Msa0799240:intron | 55.0% | |
CGGGGTGGAGAAATGTGTTG+TGG | - | chr5_3:12360524-12360543 | Msa0799240:CDS | 55.0% | |
!! | TAGTGGGTTGGTTCAAGCCG+TGG | - | chr5_3:12360596-12360615 | Msa0799240:intron | 55.0% |
GGAATAGGTTAGGCCGAGCT+GGG | - | chr5_3:12361154-12361173 | Msa0799240:intron | 55.0% | |
AGGCTTTGCAAAGCCCAGCT+CGG | + | chr5_3:12361170-12361189 | None:intergenic | 55.0% | |
ACAGGCTAGCAGGCTGTATC+AGG | + | chr5_3:12361285-12361304 | None:intergenic | 55.0% | |
!!! | GAGGCGTTTTGAGAGGCATG+AGG | - | chr5_3:12361629-12361648 | Msa0799240:CDS | 55.0% |
TGATGTGAGAGGGTCTTGGG+AGG | + | chr5_3:12362779-12362798 | None:intergenic | 55.0% | |
TATCCAGGACCCTGGTTCAG+GGG | + | chr5_3:12363730-12363749 | None:intergenic | 55.0% | |
GTATCCAGGACCCTGGTTCA+GGG | + | chr5_3:12363731-12363750 | None:intergenic | 55.0% | |
GGGAACGCCGCAATTGTAAC+TGG | + | chr5_3:12365697-12365716 | None:intergenic | 55.0% | |
ATTCCTAGGCATGCAAGCCC+CGG | - | chr5_3:12366496-12366515 | Msa0799240:intron | 55.0% | |
CTGATACGCCGCATCAACGA+AGG | - | chr5_3:12366686-12366705 | Msa0799240:intron | 55.0% | |
GATACGCCGCATCAACGAAG+GGG | - | chr5_3:12366688-12366707 | Msa0799240:intron | 55.0% | |
! | TTGGAGCTAGCTTGGCAGGT+TGG | + | chr5_3:12366794-12366813 | None:intergenic | 55.0% |
ATTCGGGGTTGGAGCTAGCT+TGG | + | chr5_3:12366802-12366821 | None:intergenic | 55.0% | |
CCTCGGCAGTTAACTGCAGT+CGG | + | chr5_3:12367760-12367779 | None:intergenic | 55.0% | |
TCCTCGGTAGTTAACTGCCG+AGG | - | chr5_3:12367783-12367802 | Msa0799240:intron | 55.0% | |
TCCTCGGCAGTTAACTACCG+AGG | + | chr5_3:12367787-12367806 | None:intergenic | 55.0% | |
TCCTCGGTAGTTAACTGCCG+AGG | - | chr5_3:12367783-12367802 | Msa0799240:intron | 55.0% | |
ACCTCGGCAGTTAACTACCG+AGG | + | chr5_3:12368414-12368433 | None:intergenic | 55.0% | |
CCTCGGTAGTTAACTGCAGC+CGG | - | chr5_3:12368437-12368456 | Msa0799240:intron | 55.0% | |
GTGCCCCCGGACATTCATTA+AGG | + | chr5_3:12368629-12368648 | None:intergenic | 55.0% | |
! | TAATGAATGTCCGGGGGCAC+CGG | - | chr5_3:12368629-12368648 | Msa0799240:intron | 55.0% |
CACCGCAATGGGGCGATATT+AGG | - | chr5_3:12368819-12368838 | Msa0799240:intron | 55.0% | |
CGCAATGGGGCGATATTAGG+AGG | - | chr5_3:12368822-12368841 | Msa0799240:intron | 55.0% | |
AGGGAAGATCCAACGGTGAC+AGG | - | chr5_3:12369581-12369600 | Msa0799240:five_prime_UTR | 55.0% | |
AGGTGGCTATGATGCCAGCA+CGG | - | chr5_3:12371634-12371653 | Msa0799240:intron | 55.0% | |
CTCAAAACCCCTCAAGCCAG+TGG | - | chr5_3:12372177-12372196 | Msa0799240:intron | 55.0% | |
AAAACCCCTCAAGCCAGTGG+TGG | - | chr5_3:12372180-12372199 | Msa0799240:intron | 55.0% | |
!! | AGAACCACCACTGGCTTGAG+GGG | + | chr5_3:12372187-12372206 | None:intergenic | 55.0% |
!! | GAGAACCACCACTGGCTTGA+GGG | + | chr5_3:12372188-12372207 | None:intergenic | 55.0% |
!! | GCGGTGATGGACTTGCAACT+TGG | - | chr5_3:12372221-12372240 | Msa0799240:intron | 55.0% |
! | CAAGTCGAGTGTTTGGTGGC+AGG | - | chr5_3:12372349-12372368 | Msa0799240:intron | 55.0% |
GGAGCGAGGTGAGCTATTAG+AGG | - | chr5_3:12372965-12372984 | Msa0799240:intron | 55.0% | |
CTCTGCAGAGGGAACTTGTG+TGG | + | chr5_3:12373202-12373221 | None:intergenic | 55.0% | |
CCGTGGAGGAGAACCACTAC+TGG | + | chr5_3:12360336-12360355 | None:intergenic | 60.0% | |
GTTCTCCTCCACGGCTTCTG+CGG | - | chr5_3:12360342-12360361 | Msa0799240:CDS | 60.0% | |
TGACCGGTCCGTCTTATCGG+TGG | + | chr5_3:12360460-12360479 | None:intergenic | 60.0% | |
GGGAATAGGTTAGGCCGAGC+TGG | - | chr5_3:12361153-12361172 | Msa0799240:intron | 60.0% | |
ACAGGCCGCAGACCAGACTT+AGG | + | chr5_3:12361221-12361240 | None:intergenic | 60.0% | |
CTACGGCCTAGCCTACGACA+GGG | + | chr5_3:12361726-12361745 | None:intergenic | 60.0% | |
ATAGGTCAGGCCGGCCTACA+GGG | + | chr5_3:12361751-12361770 | None:intergenic | 60.0% | |
AATAGGTCAGGCCGGCCTAC+AGG | + | chr5_3:12361752-12361771 | None:intergenic | 60.0% | |
GGGATGGGAATAGGTCAGGC+CGG | + | chr5_3:12361760-12361779 | None:intergenic | 60.0% | |
GGACCCAGGTGTGTGTGTCA+GGG | - | chr5_3:12362665-12362684 | Msa0799240:intron | 60.0% | |
GACCCAGGTGTGTGTGTCAG+GGG | - | chr5_3:12362666-12362685 | Msa0799240:intron | 60.0% | |
AGCCCCTGACACACACACCT+GGG | + | chr5_3:12362671-12362690 | None:intergenic | 60.0% | |
ATTTCCGCACCCCCTGAACC+AGG | - | chr5_3:12363717-12363736 | Msa0799240:intron | 60.0% | |
TTTCCGCACCCCCTGAACCA+GGG | - | chr5_3:12363718-12363737 | Msa0799240:intron | 60.0% | |
ATCCAGGACCCTGGTTCAGG+GGG | + | chr5_3:12363729-12363748 | None:intergenic | 60.0% | |
CGTATCCAGGACCCTGGTTC+AGG | + | chr5_3:12363732-12363751 | None:intergenic | 60.0% | |
TTTCCGGGGCTTGCATGCCT+AGG | + | chr5_3:12366502-12366521 | None:intergenic | 60.0% | |
GGACGACCCCTTCGTTGATG+CGG | + | chr5_3:12366697-12366716 | None:intergenic | 60.0% | |
TCGGCAGTTAACTGCCGAGG+GGG | + | chr5_3:12367727-12367746 | None:intergenic | 60.0% | |
CTCGGCAGTTAACTGCCGAG+GGG | + | chr5_3:12367726-12367745 | None:intergenic | 60.0% | |
CCTCGGCAGTTAACTGCCGA+GGG | + | chr5_3:12367725-12367744 | None:intergenic | 60.0% | |
TCCTCGGCAGTTAACTGCCG+AGG | + | chr5_3:12368469-12368488 | None:intergenic | 60.0% | |
CCGACTGCAGTTAACTGCCG+AGG | - | chr5_3:12367757-12367776 | Msa0799240:intron | 60.0% | |
CCGGCTGCAGTTAACTACCG+AGG | + | chr5_3:12368440-12368459 | None:intergenic | 60.0% | |
TCCTCGGCAGTTAACTGCCG+AGG | - | chr5_3:12368469-12368488 | Msa0799240:intron | 60.0% | |
CCTCGGCAGTTAACTGCCGA+GGG | - | chr5_3:12367725-12367744 | Msa0799240:intron | 60.0% | |
CTCGGCAGTTAACTGCCGAG+GGG | - | chr5_3:12367726-12367745 | Msa0799240:intron | 60.0% | |
TCGGCAGTTAACTGCCGAGG+GGG | - | chr5_3:12367727-12367746 | Msa0799240:intron | 60.0% | |
GAAATGCTAACCGGTGCCCC+CGG | + | chr5_3:12368642-12368661 | None:intergenic | 60.0% | |
TCACGAGTGCCTGTCACCGT+TGG | + | chr5_3:12369593-12369612 | None:intergenic | 60.0% | |
!! | GGAGAACCACCACTGGCTTG+AGG | + | chr5_3:12372189-12372208 | None:intergenic | 60.0% |
CCAGTGGTGGTTCTCCTCCA+CGG | - | chr5_3:12372193-12372212 | Msa0799240:intron | 60.0% | |
GTTCTCCTCCACGGCTTCTG+CGG | - | chr5_3:12360342-12360361 | Msa0799240:CDS | 60.0% | |
CATCACCGCAGAAGCCGTGG+AGG | + | chr5_3:12360350-12360369 | None:intergenic | 65.0% | |
CTCCACGGCTTCTGCGGTGA+TGG | - | chr5_3:12360348-12360367 | Msa0799240:CDS | 65.0% | |
GTCCATCACCGCAGAAGCCG+TGG | + | chr5_3:12360353-12360372 | None:intergenic | 65.0% | |
TCAAGCCGAGTGCTTGGCGG+CGG | - | chr5_3:12360488-12360507 | Msa0799240:intron | 65.0% | |
TAACCCCGCCGCCAAGCACT+CGG | + | chr5_3:12360496-12360515 | None:intergenic | 65.0% | |
AGTCTGGCCTGCCCTGTCGT+AGG | - | chr5_3:12361712-12361731 | Msa0799240:intron | 65.0% | |
CCTACGGCCTAGCCTACGAC+AGG | + | chr5_3:12361727-12361746 | None:intergenic | 65.0% | |
CCTGTCGTAGGCTAGGCCGT+AGG | - | chr5_3:12361724-12361743 | Msa0799240:intron | 65.0% | |
TAGGTCAGGCCGGCCTACAG+GGG | + | chr5_3:12361750-12361769 | None:intergenic | 65.0% | |
GACTAATCAGGGGCGGACCC+AGG | - | chr5_3:12362651-12362670 | Msa0799240:intron | 65.0% | |
CGGACCCAGGTGTGTGTGTC+AGG | - | chr5_3:12362664-12362683 | Msa0799240:intron | 65.0% | |
CAGCCCCTGACACACACACC+TGG | + | chr5_3:12362672-12362691 | None:intergenic | 65.0% | |
GGGCTGCACTTGCACACCCT+GGG | - | chr5_3:12362686-12362705 | Msa0799240:intron | 65.0% | |
CAGTGGCGTATCCAGGACCC+TGG | + | chr5_3:12363738-12363757 | None:intergenic | 65.0% | |
! | GGGGTTGGAGCTAGCTTGGC+AGG | + | chr5_3:12366798-12366817 | None:intergenic | 65.0% |
CCCTCGGCAGTTAACTGCCG+AGG | - | chr5_3:12367724-12367743 | Msa0799240:intron | 65.0% | |
CCCTCGGCAGTTAACTGCCG+AGG | + | chr5_3:12367724-12367743 | None:intergenic | 65.0% | |
CCGTGGAGGAGAACCACCAC+TGG | + | chr5_3:12372196-12372215 | None:intergenic | 65.0% | |
CATCACCGCAGAAGCCGTGG+AGG | + | chr5_3:12360350-12360369 | None:intergenic | 65.0% | |
CTCCACGGCTTCTGCGGTGA+TGG | - | chr5_3:12360348-12360367 | Msa0799240:CDS | 65.0% | |
GTCCATCACCGCAGAAGCCG+TGG | + | chr5_3:12360353-12360372 | None:intergenic | 65.0% | |
CAAGCCGAGTGCTTGGCGGC+GGG | - | chr5_3:12360489-12360508 | Msa0799240:intron | 70.0% | |
AAGCCGAGTGCTTGGCGGCG+GGG | - | chr5_3:12360490-12360509 | Msa0799240:intron | 70.0% | |
GGCCTGCCCTGTCGTAGGCT+AGG | - | chr5_3:12361717-12361736 | Msa0799240:intron | 70.0% | |
GGCCTAGCCTACGACAGGGC+AGG | + | chr5_3:12361722-12361741 | None:intergenic | 70.0% | |
GCTAGGCCGTAGGCCCCTGT+AGG | - | chr5_3:12361734-12361753 | Msa0799240:intron | 70.0% | |
GGGGCTGCACTTGCACACCC+TGG | - | chr5_3:12362685-12362704 | Msa0799240:intron | 70.0% | |
GGACCCTGGTTCAGGGGGTG+CGG | + | chr5_3:12363724-12363743 | None:intergenic | 70.0% | |
CACCCCCTGAACCAGGGTCC+TGG | - | chr5_3:12363724-12363743 | Msa0799240:intron | 70.0% | |
GGCCGTAGGCCCCTGTAGGC+CGG | - | chr5_3:12361738-12361757 | Msa0799240:intron | 75.0% | |
GGCCGGCCTACAGGGGCCTA+CGG | + | chr5_3:12361743-12361762 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 12360084 | 12373716 | 12360084 | ID=Msa0799240;Name=Msa0799240 |
chr5_3 | mRNA | 12360084 | 12373716 | 12360084 | ID=Msa0799240-mRNA-1;Parent=Msa0799240;Name=Msa0799240-mRNA-1;_AED=0.18;_eAED=0.18;_QI=1007|0.66|0.7|1|0.66|0.5|10|166|241 |
chr5_3 | exon | 12360084 | 12360400 | 12360084 | ID=Msa0799240-mRNA-1:exon:5099;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12360513 | 12360580 | 12360513 | ID=Msa0799240-mRNA-1:exon:5098;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12360766 | 12360855 | 12360766 | ID=Msa0799240-mRNA-1:exon:5097;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12361284 | 12361507 | 12361284 | ID=Msa0799240-mRNA-1:exon:5096;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12361577 | 12361724 | 12361577 | ID=Msa0799240-mRNA-1:exon:5095;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12369034 | 12369231 | 12369034 | ID=Msa0799240-mRNA-1:exon:5094;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12369330 | 12369397 | 12369330 | ID=Msa0799240-mRNA-1:exon:5093;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12369528 | 12369617 | 12369528 | ID=Msa0799240-mRNA-1:exon:5092;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12372997 | 12373476 | 12372997 | ID=Msa0799240-mRNA-1:exon:5091;Parent=Msa0799240-mRNA-1 |
chr5_3 | exon | 12373501 | 12373716 | 12373501 | ID=Msa0799240-mRNA-1:exon:5090;Parent=Msa0799240-mRNA-1 |
chr5_3 | five_prime_UTR | 12373501 | 12373716 | 12373501 | ID=Msa0799240-mRNA-1:five_prime_utr;Parent=Msa0799240-mRNA-1 |
chr5_3 | five_prime_UTR | 12372997 | 12373476 | 12372997 | ID=Msa0799240-mRNA-1:five_prime_utr;Parent=Msa0799240-mRNA-1 |
chr5_3 | five_prime_UTR | 12369528 | 12369617 | 12369528 | ID=Msa0799240-mRNA-1:five_prime_utr;Parent=Msa0799240-mRNA-1 |
chr5_3 | five_prime_UTR | 12369330 | 12369397 | 12369330 | ID=Msa0799240-mRNA-1:five_prime_utr;Parent=Msa0799240-mRNA-1 |
chr5_3 | five_prime_UTR | 12369079 | 12369231 | 12369079 | ID=Msa0799240-mRNA-1:five_prime_utr;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12369034 | 12369078 | 12369034 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12361577 | 12361724 | 12361577 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12361284 | 12361507 | 12361284 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12360766 | 12360855 | 12360766 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12360513 | 12360580 | 12360513 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | CDS | 12360250 | 12360400 | 12360250 | ID=Msa0799240-mRNA-1:cds;Parent=Msa0799240-mRNA-1 |
chr5_3 | three_prime_UTR | 12360084 | 12360249 | 12360084 | ID=Msa0799240-mRNA-1:three_prime_utr;Parent=Msa0799240-mRNA-1 |
Gene Sequence |
Protein sequence |